Started by upstream project "BIOFORMATS-test-repo" build number 222
originally caused by:
Started by upstream project "Trigger" build number 249
originally caused by:
Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder
[BIOFORMATS-test-folder] $ /bin/bash -xe /tmp/jenkins5378742868142288969.sh
+ '[' zeiss-tiff = slidebook ']'
++ date +%u
+ '[' 3 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_35317_merge_ci -v /uod/idr/repos/curated/zeiss-tiff:/data -v /uod/idr-scratch/merge-ci/curated/zeiss-tiff:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
[echo] isSnapshot = true
init-title:
[echo] ----------=========== bio-formats-testing-framework ===========----------
init-timestamp:
init:
copy-resources:
compile:
[resolver:resolve] Resolving artifacts
compile-tests:
[resolver:resolve] Resolving artifacts
[javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
[javac] warning: [options] bootstrap class path not set in conjunction with -source 8
[javac] 1 warning
test-automated:
[testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket
[testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket
[testng] File leak detector installed
[testng] 17:59:09,559 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
[testng] 17:59:09,561 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - No custom configurators were discovered as a service.
[testng] 17:59:09,561 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 17:59:09,562 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 17:59:09,562 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
[testng] 17:59:09,562 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
[testng] 17:59:09,563 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
[testng] 17:59:09,563 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 17:59:09,563 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 17:59:09,564 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
[testng] 17:59:09,564 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
[testng] 17:59:09,564 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
[testng] 17:59:09,723 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
[testng] 17:59:09,723 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
[testng] 17:59:09,745 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
[testng] 17:59:09,745 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
[testng] 17:59:09,751 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
[testng] 17:59:09,751 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
[testng] 17:59:09,751 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
[testng] 17:59:09,752 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
[testng] 17:59:09,752 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@2e3967ea - End of configuration.
[testng] 17:59:09,753 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@2e6a8155 - Registering current configuration as safe fallback point
[testng] 17:59:09,753 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 190 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
[testng] [2024-10-16 17:59:09,761] [main] java.version = 17.0.2
[testng] 17:59:09,764 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
[testng] 17:59:09,765 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 17:59:09,806 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-10-16_17-59-09.log]
[testng] 17:59:09,807 |-INFO in ch.qos.logback.core.sift.SiftProcessor@798162bc - End of configuration.
[testng] [2024-10-16 17:59:09,809] [main] testng.directory = /data
[testng] [2024-10-16 17:59:09,809] [main] testng.configDirectory = /config
[testng] [2024-10-16 17:59:09,818] [main] testng.multiplier = 1.0
[testng] [2024-10-16 17:59:09,819] [main] testng.in-memory = false
[testng] [2024-10-16 17:59:09,819] [main] testng.allow-missing = false
[testng] [2024-10-16 17:59:09,819] [main] user.language = en
[testng] [2024-10-16 17:59:09,819] [main] user.country = ${user.country}
[testng] [2024-10-16 17:59:09,819] [main] Maximum heap size = 15360 MB
[testng] Scanning for files...
[testng] [2024-10-16 18:13:47,119] [main] ----------------------------------------
[testng] [2024-10-16 18:13:47,119] [main] Total files: 15735
[testng] [2024-10-16 18:13:47,119] [main] Scan time: 877.3 s (55 ms/file)
[testng] [2024-10-16 18:13:47,120] [main] ----------------------------------------
[testng] Building list of tests...
[testng] Ready to test 125 files
[testng] [TestNG] Running:
[testng] Bio-Formats software test suite
[testng]
[testng] [2024-10-16 18:35:03,707] [pool-1-thread-1] Initializing /data/converted/ville/MultiCh-RGB/pollen_bw.tif:
[testng] 18:35:03,708 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
[testng] 18:35:03,708 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 18:35:03,709 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-10-16_18-35-03.log]
[testng] 18:35:03,709 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7b6f402a - End of configuration.
[testng] [2024-10-16 18:35:12,490] [pool-1-thread-12] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_14.tif:
[testng] 18:35:12,490 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
[testng] 18:35:12,492 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 18:35:12,493 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-10-16_18-35-12.log]
[testng] 18:35:12,493 |-INFO in ch.qos.logback.core.sift.SiftProcessor@49c75b67 - End of configuration.
[testng] [2024-10-16 18:35:23,083] [pool-1-thread-11] Initializing /data/converted/converted/damian.tif:
[testng] 18:35:23,083 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
[testng] 18:35:23,083 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 18:35:23,084 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-10-16_18-35-23.log]
[testng] 18:35:23,084 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3d7596e6 - End of configuration.
[testng] [2024-10-16 18:35:30,964] [pool-1-thread-10] Initializing /data/converted/jan/SampleStack_Mosaic4x5_comb.tif:
[testng] 18:35:30,964 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
[testng] 18:35:30,964 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 18:35:30,965 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-10-16_18-35-30.log]
[testng] 18:35:30,965 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2aa3c357 - End of configuration.
[testng] [2024-10-16 18:35:44,054] [pool-1-thread-9] Initializing /data/converted/joseph/E-2009_0022.tif:
[testng] 18:35:44,054 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
[testng] 18:35:44,054 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 18:35:44,055 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-10-16_18-35-44.log]
[testng] 18:35:44,055 |-INFO in ch.qos.logback.core.sift.SiftProcessor@589e9d70 - End of configuration.
[testng] [2024-10-16 18:35:53,652] [pool-1-thread-8] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast-sectioned.tif:
[testng] 18:35:53,653 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
[testng] 18:35:53,653 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 18:35:53,654 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-10-16_18-35-53.log]
[testng] 18:35:53,654 |-INFO in ch.qos.logback.core.sift.SiftProcessor@14d1d5bf - End of configuration.
[testng] [2024-10-16 18:36:03,325] [pool-1-thread-7] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_6.tif:
[testng] 18:36:03,325 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
[testng] 18:36:03,325 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 18:36:03,325 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-10-16_18-36-03.log]
[testng] 18:36:03,326 |-INFO in ch.qos.logback.core.sift.SiftProcessor@27eef18a - End of configuration.
[testng] [2024-10-16 18:36:12,378] [pool-1-thread-6] Initializing /data/converted/sebastien/test.tif:
[testng] 18:36:12,379 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
[testng] 18:36:12,379 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 18:36:12,379 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-10-16_18-36-12.log]
[testng] 18:36:12,380 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2e0fd967 - End of configuration.
[testng] [2024-10-16 18:36:20,944] [pool-1-thread-5] Initializing /data/converted/eirinn/12_2_2009-16-hes5-brdu-proper_position(52).tif:
[testng] 18:36:20,944 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
[testng] 18:36:20,944 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 18:36:20,945 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-10-16_18-36-20.log]
[testng] 18:36:20,945 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6fd67c27 - End of configuration.
[testng] [2024-10-16 18:36:29,243] [pool-1-thread-4] Initializing /data/othmar/mozaic.tif:
[testng] 18:36:29,243 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
[testng] 18:36:29,243 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 18:36:29,243 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-10-16_18-36-29.log]
[testng] 18:36:29,244 |-INFO in ch.qos.logback.core.sift.SiftProcessor@37789333 - End of configuration.
[testng] [2024-10-16 18:36:37,671] [pool-1-thread-3] Initializing /data/converted/michel/b.tif:
[testng] 18:36:37,672 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
[testng] 18:36:37,672 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 18:36:37,672 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-10-16_18-36-37.log]
[testng] 18:36:37,673 |-INFO in ch.qos.logback.core.sift.SiftProcessor@74fa9a51 - End of configuration.
[testng] [2024-10-16 18:36:47,459] [pool-1-thread-2] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_4.tif:
[testng] 18:36:47,459 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
[testng] 18:36:47,459 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 18:36:47,460 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-10-16_18-36-47.log]
[testng] 18:36:47,460 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6be434a4 - End of configuration.
[testng] [2024-10-16 18:39:38,837] [pool-1-thread-11] Initializing /data/converted/dietmar/dapi-texasred-0015.tif:
[testng] [2024-10-16 18:40:44,144] [pool-1-thread-1] Initializing /data/converted/shalin/ibidiuslide1-timelapse3_mid2.tif:
[testng] [2024-10-16 18:41:11,744] [pool-1-thread-3] Initializing /data/converted/thomas/test_axiocam_3_1.tif:
[testng] [2024-10-16 18:45:03,463] [pool-1-thread-3] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_18.tif:
[testng] [2024-10-16 19:00:45,661] [pool-1-thread-4] Initializing /data/converted/markus/PC12_neuroblastoma_Fura2_exp#9.tif:
[testng] [2024-10-16 19:01:05,043] [pool-1-thread-5] Initializing /data/converted/karsten/247096n3s3s9.tif:
[testng] [2024-10-16 19:03:32,751] [pool-1-thread-1] Initializing /data/converted/kelsey/1300x1030BW.tif:
[testng] [2024-10-16 19:06:06,119] [pool-1-thread-1] Initializing /data/converted/michel/e.tif:
[testng] [2024-10-16 19:11:37,787] [pool-1-thread-1] Initializing /data/converted/dietmar/hmads-bac1-bac7-af488-rho-af647_pre-2006-03-30-six.tif:
[testng] [2024-10-16 19:14:17,023] [pool-1-thread-5] Initializing /data/converted/michel/a.tif:
[testng] [2024-10-16 19:15:13,637] [pool-1-thread-11] Initializing /data/converted/dan/zstack_convalaria.tif:
[testng] [2024-10-16 19:16:44,707] [pool-1-thread-5] Initializing /data/converted/dietmar/hmads-bac1-bac7-af488-rho-af647_pre-2006-03-30-0016.tif:
[testng] [2024-10-16 19:18:25,105] [pool-1-thread-11] Initializing /data/converted/dietmar/hmads-bac1-bac7-af488-rho-af647_pre-2006-03-30-ten.tif:
[testng] [2024-10-16 19:20:27,002] [pool-1-thread-2] Initializing /data/converted/eirinn/5_6_2009-dj9-03_a01_01.tif:
[testng] [2024-10-16 19:21:45,676] [pool-1-thread-7] Initializing /data/converted/kelsey/432x342BW.tif:
[testng] [2024-10-16 19:24:14,555] [pool-1-thread-7] Initializing /data/converted/rachel/40K 30s A2.tif:
[testng] [2024-10-16 19:24:58,794] [pool-1-thread-12] Initializing /data/converted/markus/Hypocampus_Tiles_with_stiching.tif:
[testng] [2024-10-16 19:25:26,985] [pool-1-thread-2] Initializing /data/converted/othmar/mozaic.tif:
[testng] [2024-10-16 19:27:37,912] [pool-1-thread-7] Initializing /data/converted/rachel/40K 30s A1.tif:
[testng] [2024-10-16 19:27:56,165] [pool-1-thread-6] Initializing /data/converted/stephan/notok1.tif:
[testng] [2024-10-16 19:30:57,104] [pool-1-thread-7] Initializing /data/converted/dietmar/hmads-24h-bac1-7-af647-af488-rho-1day-hyb-csk-2007-06-29-0008_position(113).tif:
[testng] [2024-10-16 19:33:01,349] [pool-1-thread-3] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_23.tif:
[testng] [2024-10-16 19:34:13,999] [pool-1-thread-5] Initializing /data/converted/eirinn/11_10_2009-01-lcstim-15-10-09_position(1).tif:
[testng] [2024-10-16 19:37:21,408] [pool-1-thread-1] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_25.tif:
[testng] [2024-10-16 19:38:36,523] [pool-1-thread-9] Initializing /data/converted/dan/adultnr1.tif:
[testng] [2024-10-16 19:39:21,468] [pool-1-thread-6] Initializing /data/converted/converted/2chzt.tif:
[testng] [2024-10-16 19:40:12,798] [pool-1-thread-12] Initializing /data/converted/markus/HighSpeedParas.tif:
[testng] [2024-10-16 19:41:24,963] [pool-1-thread-8] Initializing /data/converted/othmar/z-stack.tif:
[testng] [2024-10-16 19:43:51,497] [pool-1-thread-11] Initializing /data/converted/vladan/vladan.tif:
[testng] [2024-10-16 19:44:35,706] [pool-1-thread-9] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_15.tif:
[testng] [2024-10-16 19:47:55,602] [pool-1-thread-2] Initializing /data/converted/ville/MultiCh-RGB/pollen_rgb.tif:
[testng] [2024-10-16 19:51:30,682] [pool-1-thread-2] Initializing /data/converted/kelsey/650x514BW.tif:
[testng] [2024-10-16 19:53:53,272] [pool-1-thread-2] Initializing /data/converted/converted/damian-compressed.tif:
[testng] [2024-10-16 19:56:12,798] [pool-1-thread-2] Initializing /data/converted/markus/Confidence_ratio_image_PC12_neuroblastoma_Fura2_exp#9-2.tif:
[testng] [2024-10-16 19:56:57,191] [pool-1-thread-5] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_21.tif:
[testng] [2024-10-16 20:15:09,122] [pool-1-thread-7] Initializing /data/converted/markus/Branchiostoma_6x12_MosaiX_Tiles_color.tif:
[testng] [2024-10-16 20:21:42,378] [pool-1-thread-11] Initializing /data/converted/stephan/notok2.tif:
[testng] [2024-10-16 20:23:44,344] [pool-1-thread-3] Initializing /data/scott/Slide133-08.tif:
[testng] [2024-10-16 20:25:52,087] [pool-1-thread-3] Initializing /data/converted/cecilia/day 1 naked nb positive 1-2007-0055.tif:
[testng] [2024-10-16 20:28:05,499] [pool-1-thread-1] Initializing /data/converted/jonas/10_0907_multidrug-0001_AB01_03.tif:
[testng] [2024-10-16 20:29:30,893] [pool-1-thread-3] Initializing /data/converted/joseph/E-2009-0004.tif:
[testng] [2024-10-16 20:32:29,995] [pool-1-thread-9] Initializing /data/converted/markus/Material_color_image_HRc_microscanned_4x3K.tif:
[testng] [2024-10-16 20:33:21,126] [pool-1-thread-11] Initializing /data/converted/miso/Aufnahme-184058-0002.tif:
[testng] [2024-10-16 20:35:20,794] [pool-1-thread-9] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_2.tif:
[testng] [2024-10-16 20:36:00,850] [pool-1-thread-11] Initializing /data/converted/markus/HeLa-Reggie-GFP_ZT_fast-DCV-CI-measured-PSF.tif:
[testng] 20:36:08,463 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
[testng] 20:36:08,464 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 20:36:08,464 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-10-16_20-36-08.log]
[testng] 20:36:08,465 |-INFO in ch.qos.logback.core.sift.SiftProcessor@146341a1 - End of configuration.
[testng] [2024-10-16 20:46:39,527] [pool-1-thread-5] Initializing /data/converted/markus/Smart_Experiment_4ch-T-time-stitched.tif:
[testng] 20:51:33,882 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
[testng] 20:51:33,882 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 20:51:33,884 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-10-16_20-51-33.log]
[testng] 20:51:33,884 |-INFO in ch.qos.logback.core.sift.SiftProcessor@292ddf3e - End of configuration.
[testng] [2024-10-16 20:53:14,398] [pool-1-thread-7] Initializing /data/converted/jonas/10_0907_multidrug-0001_AB01_08.tif:
[testng] [2024-10-16 20:58:10,957] [pool-1-thread-10] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_1.tif:
[testng] [2024-10-16 21:09:04,030] [pool-1-thread-8] Initializing /data/converted/markus/6ch-Z-stack_deconvolved.tif:
[testng] [2024-10-16 21:16:49,214] [pool-1-thread-9] Initializing /data/converted/markus/Long_TL_CElegans.tif:
[testng] [2024-10-16 21:21:45,971] [pool-1-thread-3] Initializing /data/converted/converted/wtzer_series76_z003_ch00.tif:
[testng] [2024-10-16 21:24:20,717] [pool-1-thread-3] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_8.tif:
[testng] 21:32:13,978 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
[testng] 21:32:13,978 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 21:32:13,980 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-10-16_21-32-13.log]
[testng] 21:32:13,981 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7aa5aee6 - End of configuration.
[testng] [2024-10-16 21:36:40,225] [pool-1-thread-10] Initializing /data/converted/david/snap-181518-0001.tif:
[testng] [2024-10-16 21:39:04,884] [pool-1-thread-10] Initializing /data/converted/converted/mri-stack.tif:
[testng] 21:41:23,089 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
[testng] 21:41:23,089 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 21:41:23,090 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-10-16_21-41-23.log]
[testng] 21:41:23,090 |-INFO in ch.qos.logback.core.sift.SiftProcessor@60b641f4 - End of configuration.
[testng] [2024-10-16 21:41:34,111] [pool-1-thread-10] Initializing /data/converted/eirinn/demo-tile.tif:
[testng] [2024-10-16 21:46:06,448] [pool-1-thread-10] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_3.tif:
[testng] [2024-10-16 21:51:04,244] [pool-1-thread-2] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast-widefield.tif:
[testng] 21:55:58,932 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
[testng] 21:55:58,932 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 21:55:58,933 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-10-16_21-55-58.log]
[testng] 21:55:58,933 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6a1e92a1 - End of configuration.
[testng] [2024-10-16 21:58:00,616] [pool-1-thread-1] Initializing /data/samples/mri-stack/mri-stack.tif:
[testng] [2024-10-16 21:59:32,459] [pool-1-thread-8] Initializing /data/converted/sebastien/F1.tif:
[testng] [2024-10-16 21:59:48,107] [pool-1-thread-1] Initializing /data/scott/Slide133-04.tif:
[testng] 22:00:51,498 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
[testng] 22:00:51,498 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 22:00:51,499 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-10-16_22-00-51.log]
[testng] 22:00:51,499 |-INFO in ch.qos.logback.core.sift.SiftProcessor@37d52aac - End of configuration.
[testng] 22:01:04,774 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
[testng] 22:01:04,774 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 22:01:04,774 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-10-16_22-01-04.log]
[testng] 22:01:04,775 |-INFO in ch.qos.logback.core.sift.SiftProcessor@46c2ea83 - End of configuration.
[testng] [2024-10-16 22:01:48,391] [pool-1-thread-1] Initializing /data/converted/converted/2chz.tif:
[testng] [2024-10-16 22:03:07,753] [pool-1-thread-3] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_11.tif:
[testng] [2024-10-16 22:10:00,341] [pool-1-thread-5] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_9.tif:
[testng] [2024-10-16 22:14:54,821] [pool-1-thread-8] Initializing /data/converted/karsten/Bild2.tif:
[testng] [2024-10-16 22:15:40,562] [pool-1-thread-1] Initializing /data/converted/markus/Mouse-newborn-panorama.tif:
[testng] [2024-10-16 22:16:15,525] [pool-1-thread-4] Initializing /data/converted/joseph/BEST_EXAMPLE_LONGER_EXPOSURE.tif:
[testng] [2024-10-16 22:16:25,670] [pool-1-thread-7] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_19.tif:
[testng] [2024-10-16 22:18:36,953] [pool-1-thread-8] Initializing /data/converted/converted/wtzer_series76_z003_ch00-with-rois.tif:
[testng] [2024-10-16 22:19:16,018] [pool-1-thread-10] Initializing /data/converted/michel/c.tif:
[testng] [2024-10-16 22:19:24,767] [pool-1-thread-1] Initializing /data/converted/strand/2Colors1Plane.tif:
[testng] [2024-10-16 22:20:47,365] [pool-1-thread-8] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_16.tif:
[testng] [2024-10-16 22:22:33,062] [pool-1-thread-10] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_22.tif:
[testng] 22:23:14,372 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
[testng] 22:23:14,372 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 22:23:14,372 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-10-16_22-23-14.log]
[testng] 22:23:14,373 |-INFO in ch.qos.logback.core.sift.SiftProcessor@103edda5 - End of configuration.
[testng] [2024-10-16 22:23:16,163] [pool-1-thread-4] Initializing /data/converted/joseph/Alike_best_example_but_WORKS_FINE_maybe_cause_shorter_expose.tif:
[testng] [2024-10-16 22:23:58,353] [pool-1-thread-1] Initializing /data/converted/markus/MosaiX_irregular_Z-stack_with_autofocus.tif:
Build was aborted
Calling Pipeline was cancelled
Finished: ABORTED