Started by upstream project "BIOFORMATS-test-repo" build number 27
originally caused by:
Started by upstream project "Trigger" build number 30
originally caused by:
Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@4
[BIOFORMATS-test-folder@4] $ /bin/bash -xe /tmp/jenkins17681148489025572790.sh
+ '[' bdv = slidebook ']'
++ date +%u
+ '[' 1 -le 1 ']'
+ DOCKER_ARGS='-Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR'
+ sudo docker run --rm --name BIOFORMATS-test-folder_3546_merge_ci -v /uod/idr/repos/curated/bdv:/data -v /uod/idr-scratch/merge-ci/curated/bdv:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
[echo] isSnapshot = true
init-title:
[echo] ----------=========== bio-formats-testing-framework ===========----------
init-timestamp:
init:
copy-resources:
compile:
[resolver:resolve] Resolving artifacts
compile-tests:
[resolver:resolve] Resolving artifacts
[javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
test-automated:
[testng] File leak detector installed
[testng] 02:32:51,154 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
[testng] 02:32:51,238 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
[testng] 02:32:51,277 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
[testng] 02:32:51,277 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
[testng] 02:32:51,297 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
[testng] 02:32:51,298 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
[testng] 02:32:51,298 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
[testng] 02:32:51,298 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
[testng] 02:32:51,298 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@5c30a9b0 - End of configuration.
[testng] 02:32:51,299 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@7a69b07 - Registering current configuration as safe fallback point
[testng] 02:32:51,299 |-INFO in ch.qos.logback.classic.util.ContextInitializer@5e82df6a - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 617 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
[testng] [2024-04-08 02:32:51,323] [main] java.version = 1.8.0_342
[testng] 02:32:51,327 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
[testng] 02:32:51,327 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:32:51,662 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-04-08_02-32-51.log]
[testng] 02:32:51,664 |-INFO in ch.qos.logback.core.sift.SiftProcessor@36fc695d - End of configuration.
[testng] [2024-04-08 02:32:51,686] [main] testng.directory = /data
[testng] [2024-04-08 02:32:51,686] [main] testng.configDirectory = /config
[testng] [2024-04-08 02:32:51,757] [main] testng.multiplier = 1.0
[testng] [2024-04-08 02:32:51,758] [main] testng.in-memory = false
[testng] [2024-04-08 02:32:51,758] [main] testng.allow-missing = false
[testng] [2024-04-08 02:32:51,758] [main] user.language = fr
[testng] [2024-04-08 02:32:51,758] [main] user.country = FR
[testng] [2024-04-08 02:32:51,758] [main] Maximum heap size = 13653 MB
[testng] Scanning for files...
[testng] [2024-04-08 02:32:55,660] [main] ----------------------------------------
[testng] [2024-04-08 02:32:55,661] [main] Total files: 12
[testng] [2024-04-08 02:32:55,661] [main] Scan time: 3.902 s (325 ms/file)
[testng] [2024-04-08 02:32:55,661] [main] ----------------------------------------
[testng] Building list of tests...
[testng] Ready to test 5 files
[testng] [TestNG] Running:
[testng] Bio-Formats software test suite
[testng]
[testng] [2024-04-08 02:51:40,992] [pool-1-thread-1] Initializing /data/public/samples/HisYFP-SPIM.h5:
[testng] 02:51:40,992 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
[testng] 02:51:40,993 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:51:40,993 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-04-08_02-51-40.log]
[testng] 02:51:40,994 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3f9d4e97 - End of configuration.
[testng] [2024-04-08 02:51:41,836] [pool-1-thread-5] Initializing /data/public/samples/drosophila.h5:
[testng] 02:51:41,836 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
[testng] 02:51:41,836 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:51:41,837 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-04-08_02-51-41.log]
[testng] 02:51:41,837 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1d70f62a - End of configuration.
[testng] [2024-04-08 02:51:44,328] [pool-1-thread-4] Initializing /data/public/idr0048/astroP65.h5:
[testng] 02:51:44,328 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
[testng] 02:51:44,328 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:51:44,329 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-04-08_02-51-44.log]
[testng] 02:51:44,329 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2163f57e - End of configuration.
[testng] [2024-04-08 03:01:57,702] [pool-1-thread-3] Initializing /data/public/idr0038/Lam-Cytok-MV-f0.h5:
[testng] 03:01:57,703 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
[testng] 03:01:57,703 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 03:01:57,704 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-04-08_03-01-57.log]
[testng] 03:01:57,705 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6a27b7de - End of configuration.
[testng] [2024-04-08 03:04:15,616] [pool-1-thread-2] Initializing /data/public/idr0048/WB.h5:
[testng] 03:04:15,616 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
[testng] 03:04:15,617 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 03:04:15,618 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-04-08_03-04-15.log]
[testng] 03:04:15,618 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1153ae97 - End of configuration.
[testng]
[testng] ===============================================
[testng] Bio-Formats software test suite
[testng] Total tests run: 265, Failures: 0, Skips: 0
[testng] ===============================================
[testng]
BUILD SUCCESSFUL
Total time: 58 minutes 32 seconds
Finished: SUCCESS