Started by upstream project "BIOFORMATS-test-repo" build number 227 originally caused by: Started by upstream project "Trigger" build number 252 originally caused by: Started by user devspace Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@5 [BIOFORMATS-test-folder@5] $ /bin/bash -xe /tmp/jenkins3563820449331876017.sh + '[' fv1000 = slidebook ']' ++ date +%u + '[' 5 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_35585_merge_ci -v /uod/idr/repos/curated/fv1000:/data -v /uod/idr-scratch/merge-ci/curated/fv1000:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test test-automated: [testng] File leak detector installed [testng] 09:30:12,844 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 09:30:12,845 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - No custom configurators were discovered as a service. [testng] 09:30:12,845 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 09:30:12,846 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 09:30:12,847 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 09:30:12,847 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 09:30:12,847 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 09:30:12,847 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 09:30:12,847 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 09:30:12,848 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 09:30:12,848 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 09:30:12,848 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 09:30:13,061 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 09:30:13,061 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 09:30:13,087 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 09:30:13,087 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 09:30:13,094 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 09:30:13,094 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 09:30:13,094 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 09:30:13,095 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 09:30:13,095 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@7a69b07 - End of configuration. [testng] 09:30:13,096 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@636be97c - Registering current configuration as safe fallback point [testng] 09:30:13,096 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 249 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-10-18 09:30:13,105] [main] java.version = 1.8.0_342 [testng] 09:30:13,108 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 09:30:13,108 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 09:30:13,151 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-10-18_09-30-13.log] [testng] 09:30:13,152 |-INFO in ch.qos.logback.core.sift.SiftProcessor@13c9d689 - End of configuration. [testng] [2024-10-18 09:30:13,154] [main] testng.directory = /data [testng] [2024-10-18 09:30:13,154] [main] testng.configDirectory = /config [testng] [2024-10-18 09:30:13,166] [main] testng.multiplier = 1.0 [testng] [2024-10-18 09:30:13,166] [main] testng.in-memory = false [testng] [2024-10-18 09:30:13,166] [main] testng.allow-missing = false [testng] [2024-10-18 09:30:13,166] [main] user.language = en [testng] [2024-10-18 09:30:13,166] [main] user.country = ${user.country} [testng] [2024-10-18 09:30:13,166] [main] Maximum heap size = 13653 MB [testng] Scanning for files... [testng] [2024-10-18 09:32:48,186] [main] ---------------------------------------- [testng] [2024-10-18 09:32:48,186] [main] Total files: 259 [testng] [2024-10-18 09:32:48,187] [main] Scan time: 155.02 s (598 ms/file) [testng] [2024-10-18 09:32:48,187] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 144 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-10-18 10:02:53,452] [pool-1-thread-1] Initializing /data/kashif/OIF_V1/Sample_XYZ.oif: [testng] 10:02:53,453 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 10:02:53,453 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 10:02:53,454 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-10-18_10-02-53.log] [testng] 10:02:53,455 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3097933e - End of configuration. [testng] [2024-10-18 10:02:55,961] [pool-1-thread-12] Initializing /data/shane/Data Subset/EX5-10 fresh plan.oib: [testng] 10:02:55,962 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 10:02:55,962 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 10:02:55,963 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-10-18_10-02-55.log] [testng] 10:02:55,963 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1bc348eb - End of configuration. [testng] [2024-10-18 10:02:56,408] [pool-1-thread-11] Initializing /data/aryeh/naomi/Brain 2 he1d 1.oif: [testng] 10:02:56,408 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 10:02:56,408 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 10:02:56,409 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-10-18_10-02-56.log] [testng] 10:02:56,409 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4ce6ae02 - End of configuration. [testng] [2024-10-18 10:03:02,756] [pool-1-thread-10] Initializing /data/aryeh/061010 plate 1/Image0002_06.oib: [testng] 10:03:02,756 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 10:03:02,756 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 10:03:02,757 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-10-18_10-03-02.log] [testng] 10:03:02,757 |-INFO in ch.qos.logback.core.sift.SiftProcessor@15fadac7 - End of configuration. [testng] [2024-10-18 10:03:04,121] [pool-1-thread-9] Initializing /data/pedro/plv-test.oib: [testng] 10:03:04,122 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 10:03:04,122 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 10:03:04,122 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-10-18_10-03-04.log] [testng] 10:03:04,122 |-INFO in ch.qos.logback.core.sift.SiftProcessor@30b7d918 - End of configuration. [testng] [2024-10-18 10:03:04,806] [pool-1-thread-8] Initializing /data/jcb/200909024/Sup Fig 2/2.oib: [testng] 10:03:04,806 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 10:03:04,806 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 10:03:04,807 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-10-18_10-03-04.log] [testng] 10:03:04,807 |-INFO in ch.qos.logback.core.sift.SiftProcessor@60863b05 - End of configuration. [testng] [2024-10-18 10:03:05,274] [pool-1-thread-7] Initializing /data/molly/11OCT4.OIF: [testng] 10:03:05,274 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 10:03:05,274 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 10:03:05,275 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-10-18_10-03-05.log] [testng] 10:03:05,275 |-INFO in ch.qos.logback.core.sift.SiftProcessor@17d3e13f - End of configuration. [testng] [2024-10-18 10:03:18,314] [pool-1-thread-6] Initializing /data/brian/CagedATP CaG+FuraR3_a.oib: [testng] 10:03:18,314 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 10:03:18,314 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 10:03:18,315 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-10-18_10-03-18.log] [testng] 10:03:18,315 |-INFO in ch.qos.logback.core.sift.SiftProcessor@50e4c5b2 - End of configuration. [testng] [2024-10-18 10:03:19,084] [pool-1-thread-5] Initializing /data/shane/Data Subset/NESTIN_control2.oif: [testng] 10:03:19,084 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 10:03:19,084 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 10:03:19,085 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-10-18_10-03-19.log] [testng] 10:03:19,085 |-INFO in ch.qos.logback.core.sift.SiftProcessor@657ee9dd - End of configuration. [testng] [2024-10-18 10:03:19,841] [pool-1-thread-4] Initializing /data/molly/11OCT5.OIF: [testng] 10:03:19,841 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 10:03:19,841 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 10:03:19,841 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-10-18_10-03-19.log] [testng] 10:03:19,842 |-INFO in ch.qos.logback.core.sift.SiftProcessor@598a022f - End of configuration. [testng] [2024-10-18 10:03:28,225] [pool-1-thread-3] Initializing /data/glen/Null file/test no change.oif: [testng] 10:03:28,225 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 10:03:28,225 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 10:03:28,225 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-10-18_10-03-28.log] [testng] 10:03:28,226 |-INFO in ch.qos.logback.core.sift.SiftProcessor@429ece63 - End of configuration. [testng] [2024-10-18 10:03:28,940] [pool-1-thread-2] Initializing /data/sten/01.oib: [testng] 10:03:28,940 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 10:03:28,940 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 10:03:28,941 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-10-18_10-03-28.log] [testng] 10:03:28,941 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2627a5da - End of configuration. [testng] [2024-10-18 10:03:34,974] [pool-1-thread-12] Initializing /data/johannes/Image0006/Image0006.oif.files/Image0006_Thumb.bmp: [testng] [2024-10-18 10:03:35,089] [pool-1-thread-9] Initializing /data/shane/Data Subset/MHC1_control.oif: [testng] [2024-10-18 10:03:35,888] [pool-1-thread-8] Initializing /data/kashif/OIF_V2/Sample_XYZ.oif: [testng] [2024-10-18 10:03:39,138] [pool-1-thread-2] Initializing /data/glen/seqlinestack.oif: [testng] [2024-10-18 10:03:46,571] [pool-1-thread-6] Initializing /data/brian/CagedATP CaG7a.oib: [testng] [2024-10-18 10:03:47,217] [pool-1-thread-10] Initializing /data/johannes/step5b.bmp: [testng] [2024-10-18 10:03:48,737] [pool-1-thread-12] Initializing /data/michael/CELL3.oib: [testng] [2024-10-18 10:03:50,237] [pool-1-thread-10] Initializing /data/brian/Lambda10nm.oib: [testng] [2024-10-18 10:03:52,528] [pool-1-thread-6] Initializing /data/aryeh/061010 plate 1/Image0002_02.oib: [testng] [2024-10-18 10:03:55,663] [pool-1-thread-12] Initializing /data/brian/PA-GFPv-2.oib: [testng] [2024-10-18 10:03:58,388] [pool-1-thread-10] Initializing /data/molly/11OCT3.OIF: [testng] [2024-10-18 10:05:01,325] [pool-1-thread-6] Initializing /data/glen/simulstack.oib: [testng] [2024-10-18 10:05:03,742] [pool-1-thread-5] Initializing /data/molly/11OCT6.OIF: [testng] [2024-10-18 10:05:18,028] [pool-1-thread-3] Initializing /data/shane/Data Subset/EXX4-10G40%.oib: [testng] [2024-10-18 10:05:18,525] [pool-1-thread-12] Initializing /data/brian/Kaede-Neuron-9XYZ.oib: [testng] [2024-10-18 10:05:21,407] [pool-1-thread-6] Initializing /data/glen/singleseqline.oib: [testng] [2024-10-18 10:05:22,730] [pool-1-thread-9] Initializing /data/aryeh/PIP2 ESCV Z 1 after.oib: [testng] [2024-10-18 10:05:24,169] [pool-1-thread-3] Initializing /data/monica/Image0056.oif: [testng] [2024-10-18 10:05:25,358] [pool-1-thread-12] Initializing /data/barbara/Image_with_working_import.oib: [testng] [2024-10-18 10:05:27,779] [pool-1-thread-6] Initializing /data/francesco/fGfp.c15.oib: [testng] [2024-10-18 10:05:30,296] [pool-1-thread-12] Initializing /data/daniel/M1(0 0 146)-r1-drift8_3-6-3s_4Hz_0.006cpp_fillfact-0.25-0.488mspl-3x.oib: [testng] [2024-10-18 10:05:35,190] [pool-1-thread-9] Initializing /data/brian/PA-GFP-3.oib: [testng] [2024-10-18 10:05:37,048] [pool-1-thread-6] Initializing /data/aryeh/061010 plate 1/Image0002_05.oib: [testng] [2024-10-18 10:05:42,797] [pool-1-thread-9] Initializing /data/glen/111407.oif: [testng] [2024-10-18 10:05:47,471] [pool-1-thread-6] Initializing /data/glen/ticket-10092/tbn 02-10-12 D7 DT 8300 1.oif: [testng] [2024-10-18 10:06:04,224] [pool-1-thread-12] Initializing /data/glen/singleseqframe.oif: [testng] [2024-10-18 10:06:13,616] [pool-1-thread-3] Initializing /data/glen/notsaturated.oif: [testng] [2024-10-18 10:06:43,101] [pool-1-thread-12] Initializing /data/dan/outerEV1solu6new.oib: [testng] [2024-10-18 10:06:47,761] [pool-1-thread-12] Initializing /data/brian/CFP-GFP2.oib: [testng] [2024-10-18 10:06:51,784] [pool-1-thread-12] Initializing /data/shane/Data Subset/EXX7-10G30% .oib: [testng] [2024-10-18 10:06:54,931] [pool-1-thread-12] Initializing /data/glen/Image0002.oif: [testng] [2024-10-18 10:10:17,235] [pool-1-thread-8] Initializing /data/glen/singleseqframe.oib: [testng] [2024-10-18 10:10:20,895] [pool-1-thread-8] Initializing /data/jcb/200909024/Sup Fig 2/4.oib: [testng] [2024-10-18 10:10:24,624] [pool-1-thread-8] Initializing /data/johannes/Image0016/Image0016.oif: [testng] [2024-10-18 10:11:17,089] [pool-1-thread-1] Initializing /data/brian/CagedATP CaG7.oib: [testng] [2024-10-18 10:11:20,650] [pool-1-thread-1] Initializing /data/marc/V0606J.oib: [testng] [2024-10-18 10:11:33,326] [pool-1-thread-1] Initializing /data/glen/LUT issue/Greenredfarred.oif: [testng] [2024-10-18 10:11:52,590] [pool-1-thread-3] Initializing /data/johannes/Image0010/Image0010.oif.files/Image0010_Thumb.bmp: [testng] [2024-10-18 10:11:53,798] [pool-1-thread-3] Initializing /data/tom/zseries-test.oib: [testng] [2024-10-18 10:12:00,651] [pool-1-thread-3] Initializing /data/glen/15min 200neo lyso SO1.oib: [testng] [2024-10-18 10:12:03,759] [pool-1-thread-3] Initializing /data/yasunori/series_1.oib: [testng] [2024-10-18 10:12:05,364] [pool-1-thread-1] Initializing /data/aryeh/061010 plate 1/Image0002_07.oib: [testng] [2024-10-18 10:12:08,897] [pool-1-thread-3] Initializing /data/aryeh/061010 plate 1/Image0002_09.oib: [testng] [2024-10-18 10:12:10,945] [pool-1-thread-1] Initializing /data/johannes/step2.bmp: [testng] [2024-10-18 10:12:12,637] [pool-1-thread-1] Initializing /data/shane/Data Subset/EXX6-10G30%.oib: [testng] [2024-10-18 10:12:13,388] [pool-1-thread-3] Initializing /data/johannes/Image0010/Image0010.oif: [testng] [2024-10-18 10:12:16,184] [pool-1-thread-1] Initializing /data/paul/Day 4 1 FBS flat - cell 6 - green.oib: [testng] [2024-10-18 10:12:19,575] [pool-1-thread-1] Initializing /data/johannes/Image0006/Image0006.oif: [testng] [2024-10-18 10:13:02,443] [pool-1-thread-8] Initializing /data/aryeh/030408 2 1.oib: [testng] [2024-10-18 10:13:05,519] [pool-1-thread-8] Initializing /data/david/Image0016.oif: [testng] [2024-10-18 10:13:52,674] [pool-1-thread-8] Initializing /data/molly/11OCT2.OIF: [testng] [2024-10-18 10:14:15,738] [pool-1-thread-3] Initializing /data/ramon/Image_01_01_01_01.oif: [testng] [2024-10-18 10:14:19,406] [pool-1-thread-1] Initializing /data/aryeh/1h_after_pdt.oib: [testng] [2024-10-18 10:14:39,483] [pool-1-thread-1] Initializing /data/shane/Data Subset/Ex3sol.oif: [testng] [2024-10-18 10:15:01,797] [pool-1-thread-1] Initializing /data/lavinia/NM1-RibA-RibB-side.oib: [testng] [2024-10-18 10:15:05,578] [pool-1-thread-1] Initializing /data/brian/lambda02nm.oib: [testng] [2024-10-18 10:15:08,661] [pool-1-thread-1] Initializing /data/glen/QuitIJ/06-1728brnc3my.oib: [testng] [2024-10-18 10:15:13,885] [pool-1-thread-1] Initializing /data/karl/Image0009.oib: [testng] [2024-10-18 10:15:16,605] [pool-1-thread-1] Initializing /data/molly/13SH2bUTRtime4b.oib: [testng] [2024-10-18 10:15:19,963] [pool-1-thread-9] Initializing /data/glen/4205basal106072.oif: [testng] [2024-10-18 10:15:26,227] [pool-1-thread-1] Initializing /data/stefan/YC2_spectrum-405.oib: [testng] [2024-10-18 10:15:29,037] [pool-1-thread-1] Initializing /data/glen/seqlinestack.oib: [testng] [2024-10-18 10:15:32,713] [pool-1-thread-1] Initializing /data/glen/singlesimul.oib: [testng] [2024-10-18 10:15:34,981] [pool-1-thread-1] Initializing /data/molly/11OCT9.OIF: [testng] [2024-10-18 10:15:51,962] [pool-1-thread-3] Initializing /data/aryeh/1h.oib: [testng] [2024-10-18 10:15:58,123] [pool-1-thread-3] Initializing /data/brian/Al488-yoyo1-2.oib: [testng] [2024-10-18 10:16:01,944] [pool-1-thread-3] Initializing /data/aryeh/061010 plate 1/Image0002_01.oib: [testng] [2024-10-18 10:16:06,437] [pool-1-thread-3] Initializing /data/glen/notsaturated.oib: [testng] [2024-10-18 10:16:10,966] [pool-1-thread-3] Initializing /data/brian/FLIP.oib: [testng] [2024-10-18 10:16:15,989] [pool-1-thread-3] Initializing /data/allan/new_30min3_1z2.oib: [testng] [2024-10-18 10:16:19,015] [pool-1-thread-3] Initializing /data/dan/EGFR-GFP_ptyr-555 FRET test.oib: [testng] [2024-10-18 10:16:22,196] [pool-1-thread-3] Initializing /data/simon/never_worked.oib: [testng] [2024-10-18 10:16:25,832] [pool-1-thread-3] Initializing /data/johannes/step1.bmp: [testng] [2024-10-18 10:16:27,210] [pool-1-thread-3] Initializing /data/aryeh/naomi/Brain 2 he1d 1.oib: [testng] [2024-10-18 10:16:29,193] [pool-1-thread-7] Initializing /data/kay/IM2pg.oib: [testng] [2024-10-18 10:16:31,591] [pool-1-thread-3] Initializing /data/stefan/cytosol_03e.oib: [testng] [2024-10-18 10:16:33,500] [pool-1-thread-7] Initializing /data/molly/11OCT8.OIF: [testng] [2024-10-18 10:16:44,376] [pool-1-thread-4] Initializing /data/brian/CagedATP CaG+FuraR3.oib: [testng] [2024-10-18 10:16:47,508] [pool-1-thread-4] Initializing /data/public/imagesc-71616/20220824_4492_cord_dapi__iba568_60x.oib: [testng] [2024-10-18 10:16:48,127] [pool-1-thread-3] Initializing /data/lavinia/NM1-RibB-NeuroD-uninjected.oib: [testng] [2024-10-18 10:16:51,698] [pool-1-thread-3] Initializing /data/qa-17748/Image0079.oib: [testng] [2024-10-18 10:16:52,147] [pool-1-thread-4] Initializing /data/glen/singleseqline.oif: [testng] [2024-10-18 10:16:55,489] [pool-1-thread-3] Initializing /data/bojana/XYT_FirstBolus.oib: [testng] [2024-10-18 10:16:58,256] [pool-1-thread-3] Initializing /data/glen/QuitIJ/4202A2chtest.oib: [testng] [2024-10-18 10:17:01,317] [pool-1-thread-3] Initializing /data/barbara/Image_with_failed_import.oib: [testng] [2024-10-18 10:17:04,126] [pool-1-thread-3] Initializing /data/shane/Data Subset/EX5-10 fresh sol.oib: [testng] [2024-10-18 10:17:06,565] [pool-1-thread-3] Initializing /data/yoshihito/XY.oif: [testng] [2024-10-18 10:17:19,438] [pool-1-thread-4] Initializing /data/stefan/cytosol_01a.oif: [testng] [2024-10-18 10:18:16,825] [pool-1-thread-3] Initializing /data/brian/Rhodamine-PI-1.oib: [testng] [2024-10-18 10:18:21,670] [pool-1-thread-3] Initializing /data/david/Image0016.oib: [testng] [2024-10-18 10:18:27,150] [pool-1-thread-3] Initializing /data/aryeh/061010 plate 1/Image0002_08.oib: [testng] [2024-10-18 10:18:33,714] [pool-1-thread-12] Initializing /data/molly/11OCT7.OIF: [testng] [2024-10-18 10:19:00,192] [pool-1-thread-3] Initializing /data/stefan/121206_IHC_Ncad_647_in_515_WT_36hpf_e1.oib: [testng] [2024-10-18 10:19:05,418] [pool-1-thread-3] Initializing /data/glen/QuitIJ/4202A2chtest.oif: [testng] [2024-10-18 10:19:18,471] [pool-1-thread-6] Initializing /data/allan/62909#1.oib: [testng] [2024-10-18 10:19:22,569] [pool-1-thread-6] Initializing /data/molly/11OCT11.OIF: [testng] [2024-10-18 10:21:05,805] [pool-1-thread-5] Initializing /data/glen/simulstack.oif: [testng] [2024-10-18 10:21:17,797] [pool-1-thread-2] Initializing /data/brian/LILY POLLEN.oib: [testng] [2024-10-18 10:21:24,156] [pool-1-thread-2] Initializing /data/molly/11OCT10.OIF: [testng] [2024-10-18 10:23:36,917] [pool-1-thread-11] Initializing /data/brian/Kaede-Neuron-9 405XYZ1.oib: [testng] [2024-10-18 10:23:40,594] [pool-1-thread-11] Initializing /data/christian/20min.oif: [testng] [2024-10-18 10:23:56,278] [pool-1-thread-11] Initializing /data/brian/Caged Glu-3 point.oib: [testng] [2024-10-18 10:24:00,083] [pool-1-thread-11] Initializing /data/aryeh/control_test.oib: [testng] [2024-10-18 10:24:21,438] [pool-1-thread-11] Initializing /data/glen/LUT issue/UVgreenredfarred.oif: [testng] [2024-10-18 10:25:03,818] [pool-1-thread-11] Initializing /data/alex/31h_pea3_fgf10_01_1.oif: [testng] [2024-10-18 10:27:21,509] [pool-1-thread-3] Initializing /data/aryeh/061010 plate 1/Image0002_04.oib: [testng] [2024-10-18 10:27:27,043] [pool-1-thread-3] Initializing /data/qa-17748/Image0098.oib: [testng] [2024-10-18 10:27:30,586] [pool-1-thread-3] Initializing /data/stephane/817A_3-0003_01.oib: [testng] [2024-10-18 10:27:35,471] [pool-1-thread-3] Initializing /data/tom/RGB-1.avi: [testng] [2024-10-18 10:27:38,575] [pool-1-thread-3] Initializing /data/brian/NEURON_TIMELAPS_2.oib: [testng] [2024-10-18 10:27:44,375] [pool-1-thread-3] Initializing /data/brian/Kaede15.oib: [testng] [2024-10-18 10:27:49,553] [pool-1-thread-3] Initializing /data/stefan/cytosol_08b.oif: [testng] [2024-10-18 10:31:47,572] [pool-1-thread-5] Initializing /data/glen/Null file/test change.oif: [testng] [2024-10-18 10:32:13,647] [pool-1-thread-5] Initializing /data/yoshihito/XY.oib: [testng] [2024-10-18 10:32:16,577] [pool-1-thread-5] Initializing /data/glen/LUT issue/60x11.oif: [testng] [2024-10-18 10:32:28,961] [pool-1-thread-7] Initializing /data/jean-claude/villositerat0heurea.oib: [testng] [2024-10-18 10:32:32,018] [pool-1-thread-7] Initializing /data/johannes/step4.bmp: [testng] [2024-10-18 10:32:33,843] [pool-1-thread-7] Initializing /data/johannes/step4b.bmp: [testng] [2024-10-18 10:32:35,573] [pool-1-thread-7] Initializing /data/simon/used_to_work.oib: [testng] [2024-10-18 10:32:40,451] [pool-1-thread-7] Initializing /data/johannes/step3.bmp: [testng] [2024-10-18 10:32:42,294] [pool-1-thread-7] Initializing /data/chris/missegragation-15.oib: [testng] [2024-10-18 10:32:45,488] [pool-1-thread-7] Initializing /data/stefan/test-with-stefan071024.oib: [testng] [2024-10-18 10:32:53,581] [pool-1-thread-12] Initializing /data/stefan/yc2_live-03.oib: [testng] [2024-10-18 10:32:57,634] [pool-1-thread-7] Initializing /data/brian/MitoRed-POPO3.oib: [testng] [2024-10-18 10:33:00,512] [pool-1-thread-12] Initializing /data/aryeh/BP3 3h ch2.oif: [testng] [2024-10-18 10:33:22,279] [pool-1-thread-7] Initializing /data/aryeh/061010 plate 1/Image0002_10.oib: [testng] [2024-10-18 10:33:27,447] [pool-1-thread-9] Initializing /data/jae/Image0001.oib: [testng] [2024-10-18 10:33:28,479] [pool-1-thread-7] Initializing /data/glen/singlesimul.oif: [testng] [2024-10-18 10:33:31,886] [pool-1-thread-9] Initializing /data/satoshi/60x_5x_1.oif: [testng] [2024-10-18 10:33:58,916] [pool-1-thread-7] Initializing /data/marc/V0606L.oib: [testng] [2024-10-18 10:34:14,435] [pool-1-thread-7] Initializing /data/aryeh/061010 plate 1/Image0002_03.oib: [testng] [2024-10-18 10:34:19,371] [pool-1-thread-7] Initializing /data/aryeh/PIP2 ESCV control Z 1.oib: [testng] 11:22:16,954 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 11:22:16,954 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 11:22:16,955 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-10-18_11-22-16.log] [testng] 11:22:16,955 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3212ff1b - End of configuration. [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 7632, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 112 minutes 8 seconds Finished: SUCCESS