Started by upstream project "BIOFORMATS-test-repo" build number 227 originally caused by: Started by upstream project "Trigger" build number 252 originally caused by: Started by user devspace Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@6 [BIOFORMATS-test-folder@6] $ /bin/bash -xe /tmp/jenkins13408173138384162172.sh + '[' zeiss-tiff = slidebook ']' ++ date +%u + '[' 5 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_35672_merge_ci -v /uod/idr/repos/curated/zeiss-tiff:/data -v /uod/idr-scratch/merge-ci/curated/zeiss-tiff:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test test-automated: [testng] File leak detector installed [testng] 12:06:26,124 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 12:06:26,126 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - No custom configurators were discovered as a service. [testng] 12:06:26,126 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 12:06:26,127 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 12:06:26,127 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 12:06:26,127 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 12:06:26,127 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 0 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 12:06:26,127 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 12:06:26,128 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 12:06:26,128 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 12:06:26,128 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 12:06:26,128 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 12:06:26,364 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 12:06:26,364 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 12:06:26,392 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 12:06:26,392 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 12:06:26,401 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 12:06:26,401 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 12:06:26,401 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 12:06:26,401 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 12:06:26,401 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@7a69b07 - End of configuration. [testng] 12:06:26,402 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@636be97c - Registering current configuration as safe fallback point [testng] 12:06:26,402 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 274 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-10-18 12:06:26,412] [main] java.version = 1.8.0_342 [testng] 12:06:26,416 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 12:06:26,416 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 12:06:26,462 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-10-18_12-06-26.log] [testng] 12:06:26,464 |-INFO in ch.qos.logback.core.sift.SiftProcessor@13c9d689 - End of configuration. [testng] [2024-10-18 12:06:26,466] [main] testng.directory = /data [testng] [2024-10-18 12:06:26,466] [main] testng.configDirectory = /config [testng] [2024-10-18 12:06:26,478] [main] testng.multiplier = 1.0 [testng] [2024-10-18 12:06:26,479] [main] testng.in-memory = false [testng] [2024-10-18 12:06:26,479] [main] testng.allow-missing = false [testng] [2024-10-18 12:06:26,479] [main] user.language = en [testng] [2024-10-18 12:06:26,479] [main] user.country = ${user.country} [testng] [2024-10-18 12:06:26,479] [main] Maximum heap size = 13653 MB [testng] Scanning for files... [testng] [2024-10-18 12:07:43,820] [main] ---------------------------------------- [testng] [2024-10-18 12:07:43,820] [main] Total files: 15735 [testng] [2024-10-18 12:07:43,820] [main] Scan time: 77.34 s (4 ms/file) [testng] [2024-10-18 12:07:43,820] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 125 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-10-18 12:10:14,122] [pool-1-thread-1] Initializing /data/converted/converted/mri-stack.tif: [testng] 12:10:14,123 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 12:10:14,123 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 12:10:14,124 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-10-18_12-10-14.log] [testng] 12:10:14,124 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1df776f4 - End of configuration. [testng] [2024-10-18 12:10:15,890] [pool-1-thread-12] Initializing /data/converted/joseph/BEST_EXAMPLE_LONGER_EXPOSURE.tif: [testng] 12:10:15,890 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 12:10:15,890 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 12:10:15,891 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-10-18_12-10-15.log] [testng] 12:10:15,891 |-INFO in ch.qos.logback.core.sift.SiftProcessor@25dea042 - End of configuration. [testng] [2024-10-18 12:10:17,186] [pool-1-thread-11] Initializing /data/converted/shalin/ibidiuslide1-timelapse3_mid2.tif: [testng] 12:10:17,186 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 12:10:17,186 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 12:10:17,187 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-10-18_12-10-17.log] [testng] 12:10:17,187 |-INFO in ch.qos.logback.core.sift.SiftProcessor@252f2b31 - End of configuration. [testng] [2024-10-18 12:10:18,940] [pool-1-thread-10] Initializing /data/converted/kelsey/432x342BW.tif: [testng] 12:10:18,941 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 12:10:18,941 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 12:10:18,941 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-10-18_12-10-18.log] [testng] 12:10:18,942 |-INFO in ch.qos.logback.core.sift.SiftProcessor@98da2bb - End of configuration. [testng] [2024-10-18 12:10:20,546] [pool-1-thread-9] Initializing /data/converted/eirinn/pharm3-saline2-0147_11.tif: [testng] 12:10:20,546 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 12:10:20,546 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 12:10:20,547 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-10-18_12-10-20.log] [testng] 12:10:20,547 |-INFO in ch.qos.logback.core.sift.SiftProcessor@57d4cfc5 - End of configuration. [testng] [2024-10-18 12:10:22,326] [pool-1-thread-8] Initializing /data/converted/converted/2chz.tif: [testng] 12:10:22,326 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 12:10:22,326 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 12:10:22,327 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-10-18_12-10-22.log] [testng] 12:10:22,327 |-INFO in ch.qos.logback.core.sift.SiftProcessor@93c20f2 - End of configuration. [testng] [2024-10-18 12:10:23,761] [pool-1-thread-7] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_1.tif: [testng] 12:10:23,761 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 12:10:23,761 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 12:10:23,762 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-10-18_12-10-23.log] [testng] 12:10:23,763 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6eb24f84 - End of configuration. [testng] [2024-10-18 12:10:25,216] [pool-1-thread-6] Initializing /data/converted/dietmar/138.tif: [testng] 12:10:25,216 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 12:10:25,216 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 12:10:25,217 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-10-18_12-10-25.log] [testng] 12:10:25,217 |-INFO in ch.qos.logback.core.sift.SiftProcessor@62f61acb - End of configuration. [testng] [2024-10-18 12:10:26,498] [pool-1-thread-5] Initializing /data/converted/jan/SampleStack_Mosaic4x5_comb.tif: [testng] 12:10:26,498 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 12:10:26,498 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 12:10:26,498 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-10-18_12-10-26.log] [testng] 12:10:26,499 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2b701b3b - End of configuration. [testng] [2024-10-18 12:10:28,402] [pool-1-thread-4] Initializing /data/converted/markus/Brain_high_dynamic_range_imaging_Z-stack.tif: [testng] 12:10:28,402 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 12:10:28,402 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 12:10:28,402 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-10-18_12-10-28.log] [testng] 12:10:28,403 |-INFO in ch.qos.logback.core.sift.SiftProcessor@37766cb9 - End of configuration. [testng] [2024-10-18 12:10:29,574] [pool-1-thread-3] Initializing /data/converted/kelsey/650x514BW.tif: [testng] 12:10:29,574 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 12:10:29,574 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 12:10:29,575 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-10-18_12-10-29.log] [testng] 12:10:29,575 |-INFO in ch.qos.logback.core.sift.SiftProcessor@769309d - End of configuration. [testng] [2024-10-18 12:10:30,645] [pool-1-thread-2] Initializing /data/converted/converted/damian.tif: [testng] 12:10:30,646 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 12:10:30,646 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 12:10:30,646 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-10-18_12-10-30.log] [testng] 12:10:30,647 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4aa9d814 - End of configuration. [testng] [2024-10-18 12:10:55,208] [pool-1-thread-1] Initializing /data/converted/converted/deconvolve6_pseudo_tl000_zs000.tif: [testng] [2024-10-18 12:10:57,183] [pool-1-thread-10] Initializing /data/converted/dietmar/hmads-bac1-bac7-af488-rho-af647_pre-2006-03-30-ten.tif: [testng] [2024-10-18 12:10:59,115] [pool-1-thread-2] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_14.tif: [testng] [2024-10-18 12:11:01,235] [pool-1-thread-3] Initializing /data/scott/Slide133-04.tif: [testng] [2024-10-18 12:11:27,566] [pool-1-thread-1] Initializing /data/converted/karsten/Bild1.tif: [testng] [2024-10-18 12:11:33,077] [pool-1-thread-3] Initializing /data/converted/darren/section0002_w1.tif: [testng] [2024-10-18 12:11:52,768] [pool-1-thread-12] Initializing /data/converted/monica/Monica_elegans_movie.tif: [testng] [2024-10-18 12:12:04,724] [pool-1-thread-3] Initializing /data/converted/markus/Long_TL_CElegans.tif: [testng] [2024-10-18 12:12:07,515] [pool-1-thread-1] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast-widefield.tif: [testng] [2024-10-18 12:13:47,560] [pool-1-thread-8] Initializing /data/converted/dan/zstack_convalaria.tif: [testng] [2024-10-18 12:14:19,528] [pool-1-thread-11] Initializing /data/scott/Slide133-11.tif: [testng] [2024-10-18 12:14:25,198] [pool-1-thread-8] Initializing /data/converted/rolf/example_1-2010_11_25.tif: [testng] [2024-10-18 12:14:27,126] [pool-1-thread-4] Initializing /data/converted/lior/live+cf2b.tif: [testng] [2024-10-18 12:14:52,755] [pool-1-thread-11] Initializing /data/samples/mri-stack/mri-stack.tif: [testng] [2024-10-18 12:15:00,859] [pool-1-thread-8] Initializing /data/converted/eirinn/12_16_2009-01-tara-hd-triple-5to15_position(1)5.tif: [testng] [2024-10-18 12:15:21,396] [pool-1-thread-11] Initializing /data/qa-21570/250618_J1_diff_D3-2-0004.tif: [testng] [2024-10-18 12:15:23,642] [pool-1-thread-4] Initializing /data/converted/joseph/E-2009-0001a.tif: [testng] [2024-10-18 12:15:39,253] [pool-1-thread-10] Initializing /data/converted/markus/PC12_neuroblastoma_Fura2_exp#9.tif: [testng] [2024-10-18 12:15:56,173] [pool-1-thread-11] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_13.tif: [testng] [2024-10-18 12:17:32,553] [pool-1-thread-9] Initializing /data/qa-21570/250618_J1_diff_D3-2-0002.tif: [testng] [2024-10-18 12:18:02,700] [pool-1-thread-9] Initializing /data/converted/converted/wtzer_series76_z003_ch00.tif: [testng] [2024-10-18 12:18:11,220] [pool-1-thread-7] Initializing /data/converted/markus/Material_color_image_HRc_microscanned_4x3K.tif: [testng] [2024-10-18 12:18:34,053] [pool-1-thread-9] Initializing /data/converted/eirinn/11_10_2009-01-lcstim-15-10-09_position(1).tif: [testng] [2024-10-18 12:18:48,955] [pool-1-thread-7] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_24.tif: [testng] [2024-10-18 12:18:50,920] [pool-1-thread-6] Initializing /data/converted/joseph/E-2009-0004.tif: [testng] [2024-10-18 12:19:49,483] [pool-1-thread-2] Initializing /data/converted/markus/Smart_Experiment_4ch-T-time-stitched.tif: [testng] [2024-10-18 12:21:12,087] [pool-1-thread-8] Initializing /data/othmar/mozaic.tif: [testng] [2024-10-18 12:22:15,897] [pool-1-thread-9] Initializing /data/converted/markus/Confidence_ratio_image_PC12_neuroblastoma_Fura2_exp#9-2.tif: [testng] [2024-10-18 12:23:10,950] [pool-1-thread-1] Initializing /data/converted/othmar/z-stack.tif: [testng] [2024-10-18 12:23:33,470] [pool-1-thread-11] Initializing /data/converted/sebastien/F1.tif: [testng] [2024-10-18 12:24:35,926] [pool-1-thread-8] Initializing /data/converted/thomas/test_axiocam_3_1.tif: [testng] [2024-10-18 12:24:50,476] [pool-1-thread-4] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast.tif: [testng] [2024-10-18 12:25:01,353] [pool-1-thread-8] Initializing /data/converted/converted/wtzer_series76_z003_ch00-with-rois.tif: [testng] [2024-10-18 12:25:20,682] [pool-1-thread-8] Initializing /data/converted/jonas/10_0907_multidrug-0001_AB01_03.tif: [testng] [2024-10-18 12:25:56,064] [pool-1-thread-7] Initializing /data/converted/dan/adultnr1.tif: [testng] [2024-10-18 12:26:24,457] [pool-1-thread-11] Initializing /data/scott/Slide133-01.tif: [testng] [2024-10-18 12:26:43,071] [pool-1-thread-6] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_3.tif: [testng] [2024-10-18 12:26:51,581] [pool-1-thread-11] Initializing /data/converted/kelsey/1300x1030BW.tif: [testng] [2024-10-18 12:26:53,176] [pool-1-thread-7] Initializing /data/converted/markus/HighSpeedParas.tif: [testng] [2024-10-18 12:27:17,437] [pool-1-thread-11] Initializing /data/converted/eirinn/12_2_2009-16-hes5-brdu-proper_position(52).tif: [testng] [2024-10-18 12:30:09,571] [pool-1-thread-11] Initializing /data/converted/jeffrey/750-30-03.tif: [testng] [2024-10-18 12:30:33,938] [pool-1-thread-11] Initializing /data/converted/markus/HeLa-Reggie-GFP_ZT_fast-DCV-CI-measured-PSF.tif: [testng] [2024-10-18 12:32:32,913] [pool-1-thread-6] Initializing /data/converted/vladan/vladan.tif: [testng] [2024-10-18 12:33:02,719] [pool-1-thread-4] Initializing /data/converted/karsten/Bild2.tif: [testng] [2024-10-18 12:33:04,192] [pool-1-thread-2] Initializing /data/converted/miso/Aufnahme-184058-0002.tif: [testng] [2024-10-18 12:33:17,757] [pool-1-thread-5] Initializing /data/converted/dietmar/137.tif: [testng] [2024-10-18 12:33:26,365] [pool-1-thread-2] Initializing /data/converted/converted/2chzt.tif: [testng] [2024-10-18 12:33:35,248] [pool-1-thread-4] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_11.tif: [testng] [2024-10-18 12:35:11,002] [pool-1-thread-1] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_2.tif: [testng] [2024-10-18 12:37:24,970] [pool-1-thread-6] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast-sectioned.tif: [testng] [2024-10-18 12:37:41,832] [pool-1-thread-9] Initializing /data/converted/markus/Hypocampus_Tiles_with_stiching.tif: [testng] [2024-10-18 12:38:52,108] [pool-1-thread-8] Initializing /data/converted/markus/6ch-Z-stack_deconvolved.tif: [testng] [2024-10-18 12:39:30,924] [pool-1-thread-5] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_6.tif: [testng] [2024-10-18 12:39:54,399] [pool-1-thread-4] Initializing /data/converted/dietmar/hmads-bac1-bac7-af488-rho-af647_pre-2006-03-30-0016.tif: [testng] [2024-10-18 12:40:05,602] [pool-1-thread-9] Initializing /data/converted/sebastien/test.tif: [testng] [2024-10-18 12:41:34,684] [pool-1-thread-1] Initializing /data/converted/stephan/notok2.tif: [testng] [2024-10-18 12:42:29,727] [pool-1-thread-4] Initializing /data/converted/markus/Branchiostoma_6x12_MosaiX_Tiles_color.tif: [testng] [2024-10-18 12:42:56,889] [pool-1-thread-3] Initializing /data/converted/karsten/247096n3s3s9.tif: [testng] [2024-10-18 12:43:17,373] [pool-1-thread-1] Initializing /data/converted/dietmar/hmads-24h-bac1-7-af647-af488-rho-1day-hyb-csk-2007-06-29-0008_position(113).tif: [testng] [2024-10-18 12:44:59,073] [pool-1-thread-3] Initializing /data/converted/markus/PhaseGFP-MosaiX-Timelapse_Tiles.tif: [testng] [2024-10-18 12:46:10,843] [pool-1-thread-10] Initializing /data/converted/michel/c.tif: [testng] [2024-10-18 12:46:24,875] [pool-1-thread-5] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast-sidebyside.tif: [testng] [2024-10-18 12:46:51,973] [pool-1-thread-10] Initializing /data/converted/rolf/example_2-2010_11_25.tif: [testng] [2024-10-18 12:47:20,975] [pool-1-thread-10] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_9.tif: [testng] [2024-10-18 12:47:23,131] [pool-1-thread-6] Initializing /data/converted/rachel/40K 30s A2.tif: [testng] [2024-10-18 12:47:35,659] [pool-1-thread-8] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_16.tif: [testng] [2024-10-18 12:47:56,025] [pool-1-thread-6] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_17.tif: [testng] [2024-10-18 12:48:04,423] [pool-1-thread-9] Initializing /data/converted/markus/Mouse-newborn-panorama_JPEG_5percent_compressed.tif: [testng] [2024-10-18 12:48:45,525] [pool-1-thread-9] Initializing /data/converted/michel/e.tif: [testng] [2024-10-18 12:49:20,075] [pool-1-thread-4] Initializing /data/converted/nicolas/image.tif: [testng] [2024-10-18 12:49:34,388] [pool-1-thread-9] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_5.tif: [testng] [2024-10-18 12:49:42,631] [pool-1-thread-4] Initializing /data/converted/cecilia/day 1 naked nb positive 1-2007-0055.tif: [testng] [2024-10-18 12:50:17,479] [pool-1-thread-4] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_23.tif: [testng] [2024-10-18 12:50:21,102] [pool-1-thread-1] Initializing /data/converted/markus/30channels_exposure-series.tif: [testng] [2024-10-18 12:52:24,420] [pool-1-thread-1] Initializing /data/converted/david/snap-181518-0001.tif: [testng] [2024-10-18 12:52:49,700] [pool-1-thread-1] Initializing /data/converted/strand/2Colors1Plane.tif: [testng] [2024-10-18 12:53:34,728] [pool-1-thread-1] Initializing /data/converted/darren/section0001_w1.tif: [testng] [2024-10-18 12:53:44,867] [pool-1-thread-11] Initializing /data/converted/eirinn/demo-tile.tif: [testng] [2024-10-18 12:53:52,669] [pool-1-thread-10] Initializing /data/converted/eirinn/5_6_2009-dj9-03_a01_01.tif: [testng] [2024-10-18 12:53:55,535] [pool-1-thread-3] Initializing /data/converted/michel/a.tif: [testng] [2024-10-18 12:54:00,364] [pool-1-thread-1] Initializing /data/converted/rachel/40K 30s A1.tif: [testng] [2024-10-18 12:54:14,300] [pool-1-thread-3] Initializing /data/converted/joseph/E-2009_0022.tif: [testng] [2024-10-18 12:54:17,308] [pool-1-thread-11] Initializing /data/converted/converted/damian-compressed.tif: [testng] [2024-10-18 12:54:28,073] [pool-1-thread-8] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_19.tif: [testng] [2024-10-18 12:54:31,025] [pool-1-thread-1] Initializing /data/converted/ville/MultiCh-RGB/pollen_rgb.tif: [testng] [2024-10-18 12:54:32,744] [pool-1-thread-10] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_4.tif: [testng] [2024-10-18 12:54:39,928] [pool-1-thread-11] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_22.tif: [testng] [2024-10-18 12:54:44,580] [pool-1-thread-6] Initializing /data/converted/joseph/Alike_best_example_but_WORKS_FINE_maybe_cause_shorter_expose.tif: [testng] [2024-10-18 12:55:00,380] [pool-1-thread-1] Initializing /data/converted/susan/BY4741NQ2.tif: [testng] [2024-10-18 12:55:24,771] [pool-1-thread-1] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_18.tif: [testng] [2024-10-18 12:55:36,245] [pool-1-thread-5] Initializing /data/converted/dietmar/dapi-texasred-0015.tif: [testng] [2024-10-18 12:55:39,291] [pool-1-thread-9] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_25.tif: [testng] [2024-10-18 12:56:15,693] [pool-1-thread-6] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_10.tif: [testng] [2024-10-18 12:57:04,674] [pool-1-thread-4] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_15.tif: [testng] [2024-10-18 13:00:15,335] [pool-1-thread-10] Initializing /data/converted/michel/b.tif: [testng] [2024-10-18 13:00:17,038] [pool-1-thread-5] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_8.tif: [testng] [2024-10-18 13:00:46,022] [pool-1-thread-10] Initializing /data/converted/markus/Mouse-newborn-panorama_lossless_compressed.tif: [testng] [2024-10-18 13:00:58,863] [pool-1-thread-11] Initializing /data/converted/michel/d.tif: [testng] [2024-10-18 13:01:13,052] [pool-1-thread-8] Initializing /data/dorai/F_ZImage10_(X10)_C.tif: [testng] [2024-10-18 13:01:22,116] [pool-1-thread-11] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_12.tif: [testng] [2024-10-18 13:01:23,647] [pool-1-thread-10] Initializing /data/converted/markus/Mouse-newborn-panorama.tif: [testng] [2024-10-18 13:01:35,269] [pool-1-thread-2] Initializing /data/qa-21570/20150421_HepG2_yH2AX_DAPI_0.5h_5GyDOWN_1512_cell04_SIR_ALX.dv_comp.tif: [testng] [2024-10-18 13:01:37,744] [pool-1-thread-8] Initializing /data/converted/jonas/10_0907_multidrug-0001_AB01_08.tif: [testng] [2024-10-18 13:01:45,494] [pool-1-thread-2] Initializing /data/converted/james/Sylvain_run3_1Gy_Live7-2008-0019.tif: [testng] [2024-10-18 13:01:53,684] [pool-1-thread-6] Initializing /data/converted/markus/MosaiX_irregular_Z-stack_with_autofocus.tif: [testng] [2024-10-18 13:01:55,807] [pool-1-thread-1] Initializing /data/converted/dietmar/hmads-bac1-bac7-af488-rho-af647_pre-2006-03-30-six.tif: [testng] [2024-10-18 13:02:04,726] [pool-1-thread-10] Initializing /data/converted/stephan/notok1.tif: [testng] [2024-10-18 13:02:14,960] [pool-1-thread-9] Initializing /data/qa-21570/250618_J1_diff_D3-2-0003.tif: [testng] [2024-10-18 13:02:22,283] [pool-1-thread-3] Initializing /data/scott/Slide133-08.tif: [testng] [2024-10-18 13:02:37,117] [pool-1-thread-9] Initializing /data/converted/othmar/mozaic.tif: [testng] [2024-10-18 13:02:47,431] [pool-1-thread-3] Initializing /data/converted/ville/MultiCh-RGB/pollen_bw.tif: [testng] [2024-10-18 13:03:09,846] [pool-1-thread-3] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_21.tif: [testng] [2024-10-18 13:03:12,549] [pool-1-thread-4] Initializing /data/converted/lior/live+cf5b.tif: [testng] 13:32:34,590 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 13:32:34,590 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 13:32:34,592 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-10-18_13-32-34.log] [testng] 13:32:34,592 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7e84be9b - End of configuration. [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 6625, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 86 minutes 13 seconds Finished: SUCCESS