Started by upstream project "BIOFORMATS-test-repo" build number 232 originally caused by: Started by upstream project "Trigger" build number 257 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@3 [BIOFORMATS-test-folder@3] $ /bin/bash -xe /tmp/jenkins8700301080276912119.sh + '[' fv1000 = slidebook ']' ++ date +%u + '[' 3 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_36406_merge_ci -v /uod/idr/repos/curated/fv1000:/data -v /uod/idr-scratch/merge-ci/curated/fv1000:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] 1 warning test-automated: [testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket [testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket [testng] File leak detector installed [testng] 01:47:52,503 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 01:47:52,504 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - No custom configurators were discovered as a service. [testng] 01:47:52,504 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:47:52,505 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:47:52,505 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 01:47:52,506 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 01:47:52,506 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 01:47:52,506 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:47:52,507 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:47:52,507 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 01:47:52,507 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 01:47:52,508 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 01:47:52,672 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 01:47:52,672 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 01:47:52,700 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 01:47:52,700 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 01:47:52,707 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 01:47:52,707 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 01:47:52,708 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 01:47:52,708 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 01:47:52,708 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@2e3967ea - End of configuration. [testng] 01:47:52,710 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@2e6a8155 - Registering current configuration as safe fallback point [testng] 01:47:52,710 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 203 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-10-23 01:47:52,719] [main] java.version = 17.0.2 [testng] 01:47:52,723 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 01:47:52,723 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:47:52,777 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-10-23_01-47-52.log] [testng] 01:47:52,779 |-INFO in ch.qos.logback.core.sift.SiftProcessor@798162bc - End of configuration. [testng] [2024-10-23 01:47:52,781] [main] testng.directory = /data [testng] [2024-10-23 01:47:52,782] [main] testng.configDirectory = /config [testng] [2024-10-23 01:47:52,792] [main] testng.multiplier = 1.0 [testng] [2024-10-23 01:47:52,794] [main] testng.in-memory = false [testng] [2024-10-23 01:47:52,794] [main] testng.allow-missing = false [testng] [2024-10-23 01:47:52,795] [main] user.language = en [testng] [2024-10-23 01:47:52,795] [main] user.country = ${user.country} [testng] [2024-10-23 01:47:52,795] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2024-10-23 01:48:07,171] [main] ---------------------------------------- [testng] [2024-10-23 01:48:07,171] [main] Total files: 259 [testng] [2024-10-23 01:48:07,172] [main] Scan time: 14.376 s (55 ms/file) [testng] [2024-10-23 01:48:07,172] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 144 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-10-23 01:54:08,079] [pool-1-thread-1] Initializing /data/aryeh/BP3 3h ch2.oif: [testng] 01:54:08,080 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 01:54:08,080 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:54:08,082 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-10-23_01-54-08.log] [testng] 01:54:08,083 |-INFO in ch.qos.logback.core.sift.SiftProcessor@249a06a5 - End of configuration. [testng] [2024-10-23 01:54:19,247] [pool-1-thread-12] Initializing /data/yasunori/series_1.oib: [testng] 01:54:19,247 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 01:54:19,247 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:54:19,248 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-10-23_01-54-19.log] [testng] 01:54:19,249 |-INFO in ch.qos.logback.core.sift.SiftProcessor@625d44db - End of configuration. [testng] [2024-10-23 01:54:19,689] [pool-1-thread-11] Initializing /data/simon/never_worked.oib: [testng] 01:54:19,690 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 01:54:19,690 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:54:19,691 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-10-23_01-54-19.log] [testng] 01:54:19,691 |-INFO in ch.qos.logback.core.sift.SiftProcessor@42344517 - End of configuration. [testng] [2024-10-23 01:54:19,982] [pool-1-thread-10] Initializing /data/satoshi/60x_5x_1.oif: [testng] 01:54:19,982 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 01:54:19,982 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:54:19,982 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-10-23_01-54-19.log] [testng] 01:54:19,983 |-INFO in ch.qos.logback.core.sift.SiftProcessor@66b107cd - End of configuration. [testng] [2024-10-23 01:54:20,716] [pool-1-thread-9] Initializing /data/shane/Data Subset/EXX4-10G40%.oib: [testng] 01:54:20,716 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 01:54:20,716 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:54:20,717 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-10-23_01-54-20.log] [testng] 01:54:20,717 |-INFO in ch.qos.logback.core.sift.SiftProcessor@35dffa3d - End of configuration. [testng] [2024-10-23 01:54:20,910] [pool-1-thread-8] Initializing /data/david/Image0016.oif: [testng] 01:54:20,911 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 01:54:20,911 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:54:20,911 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-10-23_01-54-20.log] [testng] 01:54:20,912 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7aa4b958 - End of configuration. [testng] [2024-10-23 01:54:21,275] [pool-1-thread-7] Initializing /data/brian/PA-GFP-3.oib: [testng] 01:54:21,275 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 01:54:21,276 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:54:21,276 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-10-23_01-54-21.log] [testng] 01:54:21,277 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7b8d9f03 - End of configuration. [testng] [2024-10-23 01:54:21,825] [pool-1-thread-6] Initializing /data/stefan/cytosol_03e.oib: [testng] 01:54:21,825 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 01:54:21,826 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:54:21,826 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-10-23_01-54-21.log] [testng] 01:54:21,826 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4fa3eb9b - End of configuration. [testng] [2024-10-23 01:54:22,720] [pool-1-thread-5] Initializing /data/johannes/Image0010/Image0010.oif: [testng] 01:54:22,720 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 01:54:22,720 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:54:22,721 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-10-23_01-54-22.log] [testng] 01:54:22,721 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5af2dfdf - End of configuration. [testng] [2024-10-23 01:54:23,104] [pool-1-thread-4] Initializing /data/brian/CFP-GFP2.oib: [testng] 01:54:23,104 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 01:54:23,104 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:54:23,104 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-10-23_01-54-23.log] [testng] 01:54:23,105 |-INFO in ch.qos.logback.core.sift.SiftProcessor@65af82f8 - End of configuration. [testng] [2024-10-23 01:54:23,420] [pool-1-thread-3] Initializing /data/glen/seqlinestack.oif: [testng] 01:54:23,420 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 01:54:23,420 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:54:23,421 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-10-23_01-54-23.log] [testng] 01:54:23,421 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6bbd8a9e - End of configuration. [testng] [2024-10-23 01:54:25,688] [pool-1-thread-2] Initializing /data/glen/Null file/test no change.oif: [testng] 01:54:25,688 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 01:54:25,688 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:54:25,689 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-10-23_01-54-25.log] [testng] 01:54:25,689 |-INFO in ch.qos.logback.core.sift.SiftProcessor@a87b0b0 - End of configuration. [testng] [2024-10-23 01:54:29,814] [pool-1-thread-9] Initializing /data/aryeh/061010 plate 1/Image0002_09.oib: [testng] [2024-10-23 01:54:30,371] [pool-1-thread-11] Initializing /data/brian/Kaede-Neuron-9 405XYZ1.oib: [testng] [2024-10-23 01:54:31,091] [pool-1-thread-12] Initializing /data/marc/V0606L.oib: [testng] [2024-10-23 01:54:32,788] [pool-1-thread-4] Initializing /data/molly/11OCT7.OIF: [testng] [2024-10-23 01:54:40,225] [pool-1-thread-7] Initializing /data/stefan/test-with-stefan071024.oib: [testng] [2024-10-23 01:54:42,507] [pool-1-thread-6] Initializing /data/aryeh/061010 plate 1/Image0002_02.oib: [testng] [2024-10-23 01:54:44,876] [pool-1-thread-11] Initializing /data/bojana/XYT_FirstBolus.oib: [testng] [2024-10-23 01:54:46,188] [pool-1-thread-9] Initializing /data/glen/simulstack.oib: [testng] [2024-10-23 01:54:47,564] [pool-1-thread-6] Initializing /data/kashif/OIF_V2/Sample_XYZ.oif: [testng] [2024-10-23 01:54:49,525] [pool-1-thread-11] Initializing /data/aryeh/061010 plate 1/Image0002_07.oib: [testng] [2024-10-23 01:54:52,090] [pool-1-thread-9] Initializing /data/glen/15min 200neo lyso SO1.oib: [testng] [2024-10-23 01:54:52,539] [pool-1-thread-7] Initializing /data/marc/V0606J.oib: [testng] [2024-10-23 01:54:54,158] [pool-1-thread-2] Initializing /data/glen/simulstack.oif: [testng] [2024-10-23 01:54:56,556] [pool-1-thread-12] Initializing /data/glen/LUT issue/Greenredfarred.oif: [testng] [2024-10-23 01:54:58,943] [pool-1-thread-11] Initializing /data/jean-claude/villositerat0heurea.oib: [testng] [2024-10-23 01:54:59,295] [pool-1-thread-9] Initializing /data/alex/31h_pea3_fgf10_01_1.oif: [testng] [2024-10-23 01:55:04,988] [pool-1-thread-11] Initializing /data/daniel/M1(0 0 146)-r1-drift8_3-6-3s_4Hz_0.006cpp_fillfact-0.25-0.488mspl-3x.oib: [testng] [2024-10-23 01:55:12,244] [pool-1-thread-8] Initializing /data/aryeh/061010 plate 1/Image0002_05.oib: [testng] [2024-10-23 01:55:13,045] [pool-1-thread-7] Initializing /data/glen/singlesimul.oib: [testng] [2024-10-23 01:55:16,170] [pool-1-thread-7] Initializing /data/glen/seqlinestack.oib: [testng] [2024-10-23 01:55:17,766] [pool-1-thread-8] Initializing /data/shane/Data Subset/EX5-10 fresh sol.oib: [testng] [2024-10-23 01:55:20,499] [pool-1-thread-7] Initializing /data/allan/62909#1.oib: [testng] [2024-10-23 01:55:20,815] [pool-1-thread-8] Initializing /data/paul/Day 4 1 FBS flat - cell 6 - green.oib: [testng] [2024-10-23 01:55:23,080] [pool-1-thread-7] Initializing /data/stefan/YC2_spectrum-405.oib: [testng] [2024-10-23 01:55:24,772] [pool-1-thread-8] Initializing /data/tom/zseries-test.oib: [testng] [2024-10-23 01:55:28,046] [pool-1-thread-12] Initializing /data/molly/13SH2bUTRtime4b.oib: [testng] [2024-10-23 01:55:28,892] [pool-1-thread-7] Initializing /data/stefan/cytosol_08b.oif: [testng] [2024-10-23 01:55:34,861] [pool-1-thread-8] Initializing /data/stephane/817A_3-0003_01.oib: [testng] [2024-10-23 01:55:36,597] [pool-1-thread-12] Initializing /data/public/imagesc-71616/20220824_4492_cord_dapi__iba568_60x.oib: [testng] [2024-10-23 01:55:37,051] [pool-1-thread-11] Initializing /data/dan/outerEV1solu6new.oib: [testng] [2024-10-23 01:55:41,061] [pool-1-thread-8] Initializing /data/brian/CagedATP CaG7a.oib: [testng] [2024-10-23 01:55:42,482] [pool-1-thread-12] Initializing /data/brian/CagedATP CaG7.oib: [testng] [2024-10-23 01:55:42,903] [pool-1-thread-11] Initializing /data/stefan/yc2_live-03.oib: [testng] [2024-10-23 01:55:44,924] [pool-1-thread-8] Initializing /data/dan/EGFR-GFP_ptyr-555 FRET test.oib: [testng] [2024-10-23 01:55:46,716] [pool-1-thread-12] Initializing /data/molly/11OCT10.OIF: [testng] [2024-10-23 01:55:58,084] [pool-1-thread-8] Initializing /data/brian/Kaede-Neuron-9XYZ.oib: [testng] [2024-10-23 01:55:59,230] [pool-1-thread-11] Initializing /data/molly/11OCT6.OIF: [testng] [2024-10-23 01:56:08,408] [pool-1-thread-8] Initializing /data/glen/singleseqframe.oif: [testng] [2024-10-23 01:56:09,785] [pool-1-thread-5] Initializing /data/molly/11OCT4.OIF: [testng] [2024-10-23 01:56:25,391] [pool-1-thread-10] Initializing /data/molly/11OCT8.OIF: [testng] [2024-10-23 01:56:35,673] [pool-1-thread-8] Initializing /data/stefan/121206_IHC_Ncad_647_in_515_WT_36hpf_e1.oib: [testng] [2024-10-23 01:56:38,614] [pool-1-thread-8] Initializing /data/david/Image0016.oib: [testng] [2024-10-23 01:56:44,070] [pool-1-thread-8] Initializing /data/glen/singleseqline.oif: [testng] [2024-10-23 01:57:10,267] [pool-1-thread-8] Initializing /data/qa-17748/Image0079.oib: [testng] [2024-10-23 01:57:13,815] [pool-1-thread-8] Initializing /data/aryeh/control_test.oib: [testng] [2024-10-23 01:57:36,220] [pool-1-thread-8] Initializing /data/aryeh/naomi/Brain 2 he1d 1.oib: [testng] [2024-10-23 01:57:41,543] [pool-1-thread-8] Initializing /data/jae/Image0001.oib: [testng] [2024-10-23 01:57:45,420] [pool-1-thread-8] Initializing /data/glen/QuitIJ/06-1728brnc3my.oib: [testng] [2024-10-23 01:57:49,933] [pool-1-thread-8] Initializing /data/shane/Data Subset/MHC1_control.oif: [testng] [2024-10-23 01:58:08,354] [pool-1-thread-8] Initializing /data/shane/Data Subset/EXX6-10G30%.oib: [testng] [2024-10-23 01:58:11,170] [pool-1-thread-8] Initializing /data/johannes/Image0006/Image0006.oif.files/Image0006_Thumb.bmp: [testng] [2024-10-23 01:58:12,142] [pool-1-thread-8] Initializing /data/glen/QuitIJ/4202A2chtest.oib: [testng] [2024-10-23 01:58:15,339] [pool-1-thread-8] Initializing /data/johannes/step5b.bmp: [testng] [2024-10-23 01:58:17,914] [pool-1-thread-8] Initializing /data/molly/11OCT9.OIF: [testng] [2024-10-23 02:00:35,830] [pool-1-thread-6] Initializing /data/johannes/step4.bmp: [testng] [2024-10-23 02:00:38,498] [pool-1-thread-6] Initializing /data/brian/Lambda10nm.oib: [testng] [2024-10-23 02:00:43,578] [pool-1-thread-6] Initializing /data/aryeh/PIP2 ESCV control Z 1.oib: [testng] [2024-10-23 02:00:51,027] [pool-1-thread-6] Initializing /data/tom/RGB-1.avi: [testng] [2024-10-23 02:00:54,977] [pool-1-thread-6] Initializing /data/yoshihito/XY.oif: [testng] [2024-10-23 02:01:19,278] [pool-1-thread-6] Initializing /data/barbara/Image_with_working_import.oib: [testng] [2024-10-23 02:01:23,288] [pool-1-thread-6] Initializing /data/glen/4205basal106072.oif: [testng] [2024-10-23 02:05:37,232] [pool-1-thread-2] Initializing /data/sten/01.oib: [testng] [2024-10-23 02:05:44,625] [pool-1-thread-2] Initializing /data/barbara/Image_with_failed_import.oib: [testng] [2024-10-23 02:05:50,005] [pool-1-thread-2] Initializing /data/molly/11OCT3.OIF: [testng] [2024-10-23 02:07:07,524] [pool-1-thread-9] Initializing /data/jcb/200909024/Sup Fig 2/2.oib: [testng] [2024-10-23 02:07:12,546] [pool-1-thread-9] Initializing /data/glen/singlesimul.oif: [testng] [2024-10-23 02:08:04,075] [pool-1-thread-9] Initializing /data/simon/used_to_work.oib: [testng] [2024-10-23 02:08:11,488] [pool-1-thread-9] Initializing /data/shane/Data Subset/EXX7-10G30% .oib: [testng] [2024-10-23 02:08:17,375] [pool-1-thread-9] Initializing /data/brian/Al488-yoyo1-2.oib: [testng] [2024-10-23 02:08:22,553] [pool-1-thread-9] Initializing /data/shane/Data Subset/EX5-10 fresh plan.oib: [testng] [2024-10-23 02:08:27,651] [pool-1-thread-9] Initializing /data/aryeh/1h.oib: [testng] [2024-10-23 02:08:34,864] [pool-1-thread-9] Initializing /data/glen/111407.oif: [testng] [2024-10-23 02:09:28,297] [pool-1-thread-4] Initializing /data/chris/missegragation-15.oib: [testng] [2024-10-23 02:09:31,952] [pool-1-thread-4] Initializing /data/glen/singleseqframe.oib: [testng] [2024-10-23 02:09:35,440] [pool-1-thread-4] Initializing /data/kashif/OIF_V1/Sample_XYZ.oif: [testng] [2024-10-23 02:12:45,776] [pool-1-thread-5] Initializing /data/monica/Image0056.oif: [testng] [2024-10-23 02:13:40,085] [pool-1-thread-5] Initializing /data/brian/CagedATP CaG+FuraR3.oib: [testng] [2024-10-23 02:13:46,083] [pool-1-thread-5] Initializing /data/jcb/200909024/Sup Fig 2/4.oib: [testng] [2024-10-23 02:13:51,593] [pool-1-thread-5] Initializing /data/aryeh/030408 2 1.oib: [testng] [2024-10-23 02:13:58,055] [pool-1-thread-5] Initializing /data/yoshihito/XY.oib: [testng] [2024-10-23 02:14:03,666] [pool-1-thread-5] Initializing /data/johannes/Image0016/Image0016.oif: [testng] [2024-10-23 02:15:29,628] [pool-1-thread-10] Initializing /data/glen/QuitIJ/4202A2chtest.oif: [testng] [2024-10-23 02:15:41,725] [pool-1-thread-3] Initializing /data/aryeh/1h_after_pdt.oib: [testng] [2024-10-23 02:15:49,973] [pool-1-thread-11] Initializing /data/christian/20min.oif: [testng] [2024-10-23 02:16:04,161] [pool-1-thread-3] Initializing /data/glen/Null file/test change.oif: [testng] [2024-10-23 02:16:07,807] [pool-1-thread-11] Initializing /data/brian/Rhodamine-PI-1.oib: [testng] [2024-10-23 02:16:11,964] [pool-1-thread-11] Initializing /data/ramon/Image_01_01_01_01.oif: [testng] [2024-10-23 02:16:20,141] [pool-1-thread-7] Initializing /data/glen/notsaturated.oib: [testng] [2024-10-23 02:16:26,678] [pool-1-thread-7] Initializing /data/shane/Data Subset/Ex3sol.oif: [testng] [2024-10-23 02:16:34,835] [pool-1-thread-3] Initializing /data/brian/Kaede15.oib: [testng] [2024-10-23 02:16:41,154] [pool-1-thread-3] Initializing /data/johannes/Image0006/Image0006.oif: [testng] [2024-10-23 02:17:01,205] [pool-1-thread-7] Initializing /data/glen/Image0002.oif: [testng] [2024-10-23 02:17:48,993] [pool-1-thread-5] Initializing /data/johannes/Image0010/Image0010.oif.files/Image0010_Thumb.bmp: [testng] [2024-10-23 02:17:50,827] [pool-1-thread-5] Initializing /data/francesco/fGfp.c15.oib: [testng] [2024-10-23 02:17:55,875] [pool-1-thread-5] Initializing /data/aryeh/061010 plate 1/Image0002_04.oib: [testng] [2024-10-23 02:18:03,801] [pool-1-thread-5] Initializing /data/brian/lambda02nm.oib: [testng] [2024-10-23 02:18:10,344] [pool-1-thread-5] Initializing /data/lavinia/NM1-RibB-NeuroD-uninjected.oib: [testng] [2024-10-23 02:18:16,854] [pool-1-thread-5] Initializing /data/allan/new_30min3_1z2.oib: [testng] [2024-10-23 02:18:22,738] [pool-1-thread-5] Initializing /data/michael/CELL3.oib: [testng] [2024-10-23 02:18:28,326] [pool-1-thread-5] Initializing /data/brian/FLIP.oib: [testng] [2024-10-23 02:18:34,630] [pool-1-thread-5] Initializing /data/brian/Caged Glu-3 point.oib: [testng] [2024-10-23 02:18:39,335] [pool-1-thread-5] Initializing /data/johannes/step1.bmp: [testng] [2024-10-23 02:18:41,774] [pool-1-thread-5] Initializing /data/molly/11OCT5.OIF: [testng] [2024-10-23 02:19:02,456] [pool-1-thread-11] Initializing /data/glen/singleseqline.oib: [testng] [2024-10-23 02:19:08,214] [pool-1-thread-11] Initializing /data/glen/ticket-10092/tbn 02-10-12 D7 DT 8300 1.oif: [testng] [2024-10-23 02:19:34,039] [pool-1-thread-3] Initializing /data/lavinia/NM1-RibA-RibB-side.oib: [testng] [2024-10-23 02:19:39,665] [pool-1-thread-3] Initializing /data/qa-17748/Image0098.oib: [testng] [2024-10-23 02:19:42,827] [pool-1-thread-3] Initializing /data/brian/LILY POLLEN.oib: [testng] [2024-10-23 02:19:49,718] [pool-1-thread-4] Initializing /data/glen/LUT issue/60x11.oif: [testng] [2024-10-23 02:19:53,079] [pool-1-thread-3] Initializing /data/johannes/step4b.bmp: [testng] [2024-10-23 02:19:55,124] [pool-1-thread-3] Initializing /data/glen/LUT issue/UVgreenredfarred.oif: [testng] [2024-10-23 02:21:29,111] [pool-1-thread-12] Initializing /data/brian/NEURON_TIMELAPS_2.oib: [testng] [2024-10-23 02:21:38,431] [pool-1-thread-3] Initializing /data/molly/11OCT11.OIF: [testng] [2024-10-23 02:22:10,260] [pool-1-thread-12] Initializing /data/aryeh/061010 plate 1/Image0002_10.oib: [testng] [2024-10-23 02:22:17,828] [pool-1-thread-12] Initializing /data/karl/Image0009.oib: [testng] [2024-10-23 02:22:26,533] [pool-1-thread-12] Initializing /data/molly/11OCT2.OIF: [testng] [2024-10-23 02:24:12,716] [pool-1-thread-9] Initializing /data/brian/CagedATP CaG+FuraR3_a.oib: [testng] [2024-10-23 02:24:18,579] [pool-1-thread-9] Initializing /data/johannes/step3.bmp: [testng] [2024-10-23 02:24:20,948] [pool-1-thread-9] Initializing /data/aryeh/061010 plate 1/Image0002_01.oib: [testng] [2024-10-23 02:24:28,877] [pool-1-thread-9] Initializing /data/aryeh/061010 plate 1/Image0002_03.oib: [testng] [2024-10-23 02:24:36,391] [pool-1-thread-9] Initializing /data/brian/MitoRed-POPO3.oib: [testng] [2024-10-23 02:24:43,496] [pool-1-thread-9] Initializing /data/stefan/cytosol_01a.oif: [testng] [2024-10-23 02:27:07,876] [pool-1-thread-6] Initializing /data/aryeh/PIP2 ESCV Z 1 after.oib: [testng] [2024-10-23 02:27:17,164] [pool-1-thread-6] Initializing /data/glen/notsaturated.oif: [testng] [2024-10-23 02:27:45,013] [pool-1-thread-10] Initializing /data/kay/IM2pg.oib: [testng] [2024-10-23 02:27:50,850] [pool-1-thread-10] Initializing /data/shane/Data Subset/NESTIN_control2.oif: [testng] [2024-10-23 02:28:25,586] [pool-1-thread-10] Initializing /data/aryeh/061010 plate 1/Image0002_08.oib: [testng] [2024-10-23 02:28:32,482] [pool-1-thread-10] Initializing /data/aryeh/naomi/Brain 2 he1d 1.oif: [testng] [2024-10-23 02:35:54,500] [pool-1-thread-6] Initializing /data/pedro/plv-test.oib: [testng] [2024-10-23 02:36:01,290] [pool-1-thread-6] Initializing /data/brian/PA-GFPv-2.oib: [testng] [2024-10-23 02:36:10,301] [pool-1-thread-6] Initializing /data/aryeh/061010 plate 1/Image0002_06.oib: [testng] [2024-10-23 02:36:19,525] [pool-1-thread-6] Initializing /data/johannes/step2.bmp: [testng] 03:47:24,919 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 03:47:24,920 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:47:24,921 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-10-23_03-47-24.log] [testng] 03:47:24,921 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2f467bb9 - End of configuration. [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 7632, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 119 minutes 35 seconds Finished: SUCCESS