Started by upstream project "BIOFORMATS-test-repo" build number 234
originally caused by:
 Started by upstream project "Trigger" build number 259
 originally caused by:
  Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@9
[BIOFORMATS-test-folder@9] $ /bin/bash -xe /tmp/jenkins13584007015529503615.sh
+ '[' sis = slidebook ']'
++ date +%u
+ '[' 5 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_36774_merge_ci -v /uod/idr/repos/curated/sis:/data -v /uod/idr-scratch/merge-ci/curated/sis:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
     [echo] isSnapshot = true

init-title:
     [echo] ----------=========== bio-formats-testing-framework ===========----------

init-timestamp:

init:

copy-resources:

compile:
[resolver:resolve] Resolving artifacts

compile-tests:
[resolver:resolve] Resolving artifacts
    [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test

test-automated:
   [testng] File leak detector installed
   [testng] 02:39:23,111 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
   [testng] 02:39:23,112 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - No custom configurators were discovered as a service.
   [testng] 02:39:23,112 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 02:39:23,114 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 02:39:23,114 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
   [testng] 02:39:23,114 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
   [testng] 02:39:23,114 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 0 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
   [testng] 02:39:23,114 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 02:39:23,115 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 02:39:23,115 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
   [testng] 02:39:23,115 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
   [testng] 02:39:23,115 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
   [testng] 02:39:23,353 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
   [testng] 02:39:23,353 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
   [testng] 02:39:23,380 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
   [testng] 02:39:23,380 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
   [testng] 02:39:23,389 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
   [testng] 02:39:23,389 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
   [testng] 02:39:23,389 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
   [testng] 02:39:23,390 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
   [testng] 02:39:23,390 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@7a69b07 - End of configuration.
   [testng] 02:39:23,391 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@636be97c - Registering current configuration as safe fallback point
   [testng] 02:39:23,391 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 276 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
   [testng] [2024-10-25 02:39:23,401] [main] java.version = 1.8.0_342
   [testng] 02:39:23,404 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
   [testng] 02:39:23,404 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:39:23,453 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-10-25_02-39-23.log]
   [testng] 02:39:23,455 |-INFO in ch.qos.logback.core.sift.SiftProcessor@13c9d689 - End of configuration.
   [testng] [2024-10-25 02:39:23,457] [main] testng.directory = /data
   [testng] [2024-10-25 02:39:23,457] [main] testng.configDirectory = /config
   [testng] [2024-10-25 02:39:23,471] [main] testng.multiplier = 1.0
   [testng] [2024-10-25 02:39:23,471] [main] testng.in-memory = false
   [testng] [2024-10-25 02:39:23,471] [main] testng.allow-missing = false
   [testng] [2024-10-25 02:39:23,471] [main] user.language = en
   [testng] [2024-10-25 02:39:23,471] [main] user.country = ${user.country}
   [testng] [2024-10-25 02:39:23,471] [main] Maximum heap size = 13653 MB
   [testng] Scanning for files...
   [testng] [2024-10-25 02:39:27,745] [main] ----------------------------------------
   [testng] [2024-10-25 02:39:27,745] [main] Total files: 13
   [testng] [2024-10-25 02:39:27,745] [main] Scan time: 4.274 s (328 ms/file)
   [testng] [2024-10-25 02:39:27,745] [main] ----------------------------------------
   [testng] Building list of tests...
   [testng] Ready to test 11 files
   [testng] [TestNG] Running:
   [testng]   Bio-Formats software test suite
   [testng] 
   [testng] [2024-10-25 02:39:45,875] [pool-1-thread-1] Initializing /data/russell/Arbacia 2week ADL.tif: 
   [testng] 02:39:45,876 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
   [testng] 02:39:45,876 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:39:45,877 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-10-25_02-39-45.log]
   [testng] 02:39:45,877 |-INFO in ch.qos.logback.core.sift.SiftProcessor@31279f53 - End of configuration.
   [testng] [2024-10-25 02:39:47,126] [pool-1-thread-11] Initializing /data/glen/L1468a-2_4_15000X.tif: 
   [testng] 02:39:47,127 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
   [testng] 02:39:47,127 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:39:47,127 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-10-25_02-39-47.log]
   [testng] 02:39:47,128 |-INFO in ch.qos.logback.core.sift.SiftProcessor@49f82dc1 - End of configuration.
   [testng] [2024-10-25 02:39:48,325] [pool-1-thread-10] Initializing /data/glen/L1500k P_4_7500X.tif: 
   [testng] 02:39:48,325 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
   [testng] 02:39:48,326 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:39:48,326 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-10-25_02-39-48.log]
   [testng] 02:39:48,327 |-INFO in ch.qos.logback.core.sift.SiftProcessor@32b30196 - End of configuration.
   [testng] [2024-10-25 02:39:49,666] [pool-1-thread-9] Initializing /data/strand/MIA.tif: 
   [testng] 02:39:49,666 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
   [testng] 02:39:49,666 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:39:49,667 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-10-25_02-39-49.log]
   [testng] 02:39:49,668 |-INFO in ch.qos.logback.core.sift.SiftProcessor@72587cb4 - End of configuration.
   [testng] [2024-10-25 02:39:50,968] [pool-1-thread-8] Initializing /data/glen/CG 3.31 10K.tif: 
   [testng] 02:39:50,968 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
   [testng] 02:39:50,968 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:39:50,969 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-10-25_02-39-50.log]
   [testng] 02:39:50,970 |-INFO in ch.qos.logback.core.sift.SiftProcessor@35561612 - End of configuration.
   [testng] [2024-10-25 02:39:52,235] [pool-1-thread-7] Initializing /data/dimitri/ELN-ARM_00049_38.tif: 
   [testng] 02:39:52,235 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
   [testng] 02:39:52,236 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:39:52,237 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-10-25_02-39-52.log]
   [testng] 02:39:52,237 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2da123a8 - End of configuration.
   [testng] [2024-10-25 02:39:53,353] [pool-1-thread-6] Initializing /data/pki/Tv2.tif: 
   [testng] 02:39:53,354 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
   [testng] 02:39:53,354 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:39:53,355 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-10-25_02-39-53.log]
   [testng] 02:39:53,355 |-INFO in ch.qos.logback.core.sift.SiftProcessor@13d96353 - End of configuration.
   [testng] [2024-10-25 02:39:54,748] [pool-1-thread-5] Initializing /data/glen/CG 3.31 20K.tif: 
   [testng] 02:39:54,748 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
   [testng] 02:39:54,748 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:39:54,748 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-10-25_02-39-54.log]
   [testng] 02:39:54,749 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2f653543 - End of configuration.
   [testng] [2024-10-25 02:39:55,905] [pool-1-thread-4] Initializing /data/glen/L1500k P_3_7500X.tif: 
   [testng] 02:39:55,905 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
   [testng] 02:39:55,905 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:39:55,906 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-10-25_02-39-55.log]
   [testng] 02:39:55,906 |-INFO in ch.qos.logback.core.sift.SiftProcessor@18589129 - End of configuration.
   [testng] [2024-10-25 02:39:57,248] [pool-1-thread-3] Initializing /data/glen/CG 3.31 15K.tif: 
   [testng] 02:39:57,248 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
   [testng] 02:39:57,248 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:39:57,249 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-10-25_02-39-57.log]
   [testng] 02:39:57,249 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6beabbe8 - End of configuration.
   [testng] [2024-10-25 02:39:58,528] [pool-1-thread-2] Initializing /data/strand/FS44-1-254.tif: 
   [testng] 02:39:58,528 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
   [testng] 02:39:58,528 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:39:58,529 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-10-25_02-39-58.log]
   [testng] 02:39:58,530 |-INFO in ch.qos.logback.core.sift.SiftProcessor@97933d3 - End of configuration.
   [testng] 
   [testng] ===============================================
   [testng] Bio-Formats software test suite
   [testng] Total tests run: 583, Failures: 0, Skips: 0
   [testng] ===============================================
   [testng] 

BUILD SUCCESSFUL
Total time: 52 seconds
Finished: SUCCESS