Started by upstream project "BIOFORMATS-test-repo" build number 234
originally caused by:
 Started by upstream project "Trigger" build number 259
 originally caused by:
  Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@2
[BIOFORMATS-test-folder@2] $ /bin/bash -xe /tmp/jenkins17295179626594405572.sh
+ '[' nikon-jp2 = slidebook ']'
++ date +%u
+ '[' 5 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_36838_merge_ci -v /uod/idr/repos/curated/nikon-jp2:/data -v /uod/idr-scratch/merge-ci/curated/nikon-jp2:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
     [echo] isSnapshot = true

init-title:
     [echo] ----------=========== bio-formats-testing-framework ===========----------

init-timestamp:

init:

copy-resources:

compile:
[resolver:resolve] Resolving artifacts

compile-tests:
[resolver:resolve] Resolving artifacts
    [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test

test-automated:
   [testng] File leak detector installed
   [testng] 04:41:18,338 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
   [testng] 04:41:18,339 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - No custom configurators were discovered as a service.
   [testng] 04:41:18,339 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 04:41:18,340 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 04:41:18,340 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
   [testng] 04:41:18,340 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
   [testng] 04:41:18,341 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
   [testng] 04:41:18,341 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 04:41:18,341 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 04:41:18,341 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
   [testng] 04:41:18,341 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
   [testng] 04:41:18,341 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
   [testng] 04:41:18,550 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
   [testng] 04:41:18,550 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
   [testng] 04:41:18,576 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
   [testng] 04:41:18,576 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
   [testng] 04:41:18,583 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
   [testng] 04:41:18,583 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
   [testng] 04:41:18,583 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
   [testng] 04:41:18,584 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
   [testng] 04:41:18,584 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@7a69b07 - End of configuration.
   [testng] 04:41:18,584 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@636be97c - Registering current configuration as safe fallback point
   [testng] 04:41:18,584 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 243 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
   [testng] [2024-10-25 04:41:18,594] [main] java.version = 1.8.0_342
   [testng] 04:41:18,597 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
   [testng] 04:41:18,597 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 04:41:18,639 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-10-25_04-41-18.log]
   [testng] 04:41:18,640 |-INFO in ch.qos.logback.core.sift.SiftProcessor@13c9d689 - End of configuration.
   [testng] [2024-10-25 04:41:18,642] [main] testng.directory = /data
   [testng] [2024-10-25 04:41:18,642] [main] testng.configDirectory = /config
   [testng] [2024-10-25 04:41:18,653] [main] testng.multiplier = 1.0
   [testng] [2024-10-25 04:41:18,653] [main] testng.in-memory = false
   [testng] [2024-10-25 04:41:18,653] [main] testng.allow-missing = false
   [testng] [2024-10-25 04:41:18,653] [main] user.language = en
   [testng] [2024-10-25 04:41:18,653] [main] user.country = ${user.country}
   [testng] [2024-10-25 04:41:18,653] [main] Maximum heap size = 13653 MB
   [testng] Scanning for files...
   [testng] [2024-10-25 04:41:20,438] [main] ----------------------------------------
   [testng] [2024-10-25 04:41:20,438] [main] Total files: 11
   [testng] [2024-10-25 04:41:20,438] [main] Scan time: 1.785 s (162 ms/file)
   [testng] [2024-10-25 04:41:20,438] [main] ----------------------------------------
   [testng] Building list of tests...
   [testng] Ready to test 11 files
   [testng] [TestNG] Running:
   [testng]   Bio-Formats software test suite
   [testng] 
   [testng] [2024-10-25 04:41:29,135] [pool-1-thread-1] Initializing /data/kira/DapiFitcTexRed003.jpg: 
   [testng] 04:41:29,135 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
   [testng] 04:41:29,135 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 04:41:29,136 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-10-25_04-41-29.log]
   [testng] 04:41:29,137 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6ebd8428 - End of configuration.
   [testng] [2024-10-25 04:41:29,324] [pool-1-thread-11] Initializing /data/kira/DapiFitcTexRed006.png: 
   [testng] 04:41:29,325 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
   [testng] 04:41:29,325 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 04:41:29,326 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-10-25_04-41-29.log]
   [testng] 04:41:29,326 |-INFO in ch.qos.logback.core.sift.SiftProcessor@47851c58 - End of configuration.
   [testng] [2024-10-25 04:41:29,408] [pool-1-thread-10] Initializing /data/kira/DapiFitcTexRed001.jp2: 
   [testng] 04:41:29,408 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
   [testng] 04:41:29,408 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 04:41:29,409 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-10-25_04-41-29.log]
   [testng] 04:41:29,409 |-INFO in ch.qos.logback.core.sift.SiftProcessor@d110b16 - End of configuration.
   [testng] [2024-10-25 04:41:30,130] [pool-1-thread-9] Initializing /data/kira/DapiFitcTexRed008R.tif: 
   [testng] 04:41:30,130 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
   [testng] 04:41:30,131 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 04:41:30,131 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-10-25_04-41-30.log]
   [testng] 04:41:30,132 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2a0d961 - End of configuration.
   [testng] [2024-10-25 04:41:31,429] [pool-1-thread-8] Initializing /data/kira/DapiFitcTexRed008BGR.tif: 
   [testng] 04:41:31,429 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
   [testng] 04:41:31,429 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 04:41:31,429 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-10-25_04-41-31.log]
   [testng] 04:41:31,430 |-INFO in ch.qos.logback.core.sift.SiftProcessor@710b9344 - End of configuration.
   [testng] [2024-10-25 04:41:33,119] [pool-1-thread-7] Initializing /data/kira/DapiFitcTexRed008B.tif: 
   [testng] 04:41:33,119 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
   [testng] 04:41:33,119 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 04:41:33,120 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-10-25_04-41-33.log]
   [testng] 04:41:33,120 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2fa59366 - End of configuration.
   [testng] [2024-10-25 04:41:34,280] [pool-1-thread-6] Initializing /data/kira/DapiFitcTexRed008G.tif: 
   [testng] 04:41:34,281 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
   [testng] 04:41:34,281 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 04:41:34,281 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-10-25_04-41-34.log]
   [testng] 04:41:34,282 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7be5ff7e - End of configuration.
   [testng] [2024-10-25 04:41:35,376] [pool-1-thread-5] Initializing /data/kira/DapiFitcTexRed005.bmp: 
   [testng] 04:41:35,377 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
   [testng] 04:41:35,377 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 04:41:35,377 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-10-25_04-41-35.log]
   [testng] 04:41:35,378 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2c946901 - End of configuration.
   [testng] [2024-10-25 04:41:35,509] [pool-1-thread-4] Initializing /data/kira/DapiFitcTexRed004.tif: 
   [testng] 04:41:35,509 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
   [testng] 04:41:35,509 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 04:41:35,510 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-10-25_04-41-35.log]
   [testng] 04:41:35,510 |-INFO in ch.qos.logback.core.sift.SiftProcessor@279646cf - End of configuration.
   [testng] [2024-10-25 04:41:36,629] [pool-1-thread-3] Initializing /data/kira/DapiFitcTexRed007.gif: 
   [testng] 04:41:36,629 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
   [testng] 04:41:36,629 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 04:41:36,630 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-10-25_04-41-36.log]
   [testng] 04:41:36,630 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1fa9b55d - End of configuration.
   [testng] [2024-10-25 04:41:36,759] [pool-1-thread-2] Initializing /data/kira/DapiFitcTexRed008.jp2: 
   [testng] 04:41:36,759 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
   [testng] 04:41:36,759 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 04:41:36,760 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-10-25_04-41-36.log]
   [testng] 04:41:36,760 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7d673727 - End of configuration.
   [testng] 
   [testng] ===============================================
   [testng] Bio-Formats software test suite
   [testng] Total tests run: 583, Failures: 0, Skips: 0
   [testng] ===============================================
   [testng] 

BUILD SUCCESSFUL
Total time: 35 seconds
Finished: SUCCESS