Started by upstream project "BIOFORMATS-test-repo" build number 235
originally caused by:
Started by upstream project "Trigger" build number 260
originally caused by:
Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@5
[BIOFORMATS-test-folder@5] $ /bin/bash -xe /tmp/jenkins13603135777014110024.sh
+ '[' gatan = slidebook ']'
++ date +%u
+ '[' 6 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_36859_merge_ci -v /uod/idr/repos/curated/gatan:/data -v /uod/idr-scratch/merge-ci/curated/gatan:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
[echo] isSnapshot = true
init-title:
[echo] ----------=========== bio-formats-testing-framework ===========----------
init-timestamp:
init:
copy-resources:
compile:
[resolver:resolve] Resolving artifacts
compile-tests:
[resolver:resolve] Resolving artifacts
[javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
[javac] warning: [options] bootstrap class path not set in conjunction with -source 8
[javac] 1 warning
test-automated:
[testng] WARNING: An illegal reflective access operation has occurred
[testng] WARNING: Illegal reflective access by org.kohsuke.file_leak_detector.Listener (file:/home/build/.m2/repository/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar) to field java.net.SocketImpl.socket
[testng] WARNING: Please consider reporting this to the maintainers of org.kohsuke.file_leak_detector.Listener
[testng] WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations
[testng] WARNING: All illegal access operations will be denied in a future release
[testng] File leak detector installed
[testng] 01:20:23,488 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
[testng] 01:20:23,490 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - No custom configurators were discovered as a service.
[testng] 01:20:23,490 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 01:20:23,491 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 01:20:23,491 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
[testng] 01:20:23,492 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
[testng] 01:20:23,492 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
[testng] 01:20:23,492 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 01:20:23,492 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 01:20:23,493 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
[testng] 01:20:23,493 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
[testng] 01:20:23,494 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
[testng] 01:20:23,665 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
[testng] 01:20:23,665 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
[testng] 01:20:23,689 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
[testng] 01:20:23,689 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
[testng] 01:20:23,695 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
[testng] 01:20:23,695 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
[testng] 01:20:23,695 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
[testng] 01:20:23,696 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
[testng] 01:20:23,696 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@45099dd3 - End of configuration.
[testng] 01:20:23,697 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@60099951 - Registering current configuration as safe fallback point
[testng] 01:20:23,697 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 205 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
[testng] [2024-10-26 01:20:23,706] [main] java.version = 11.0.16
[testng] 01:20:23,709 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
[testng] 01:20:23,709 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:20:23,750 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-10-26_01-20-23.log]
[testng] 01:20:23,752 |-INFO in ch.qos.logback.core.sift.SiftProcessor@21be3395 - End of configuration.
[testng] [2024-10-26 01:20:23,754] [main] testng.directory = /data
[testng] [2024-10-26 01:20:23,754] [main] testng.configDirectory = /config
[testng] [2024-10-26 01:20:23,764] [main] testng.multiplier = 1.0
[testng] [2024-10-26 01:20:23,765] [main] testng.in-memory = false
[testng] [2024-10-26 01:20:23,765] [main] testng.allow-missing = false
[testng] [2024-10-26 01:20:23,765] [main] user.language = en
[testng] [2024-10-26 01:20:23,765] [main] user.country = ${user.country}
[testng] [2024-10-26 01:20:23,765] [main] Maximum heap size = 15360 MB
[testng] Scanning for files...
[testng] [2024-10-26 01:20:28,277] [main] ----------------------------------------
[testng] [2024-10-26 01:20:28,277] [main] Total files: 103
[testng] [2024-10-26 01:20:28,278] [main] Scan time: 4.511 s (43 ms/file)
[testng] [2024-10-26 01:20:28,278] [main] ----------------------------------------
[testng] Building list of tests...
[testng] Ready to test 98 files
[testng] [TestNG] Running:
[testng] Bio-Formats software test suite
[testng]
[testng] [2024-10-26 01:20:47,812] [pool-1-thread-1] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-364.dm3:
[testng] 01:20:47,813 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
[testng] 01:20:47,813 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:20:47,815 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-10-26_01-20-47.log]
[testng] 01:20:47,815 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5c144107 - End of configuration.
[testng] [2024-10-26 01:20:47,936] [pool-1-thread-12] Initializing /data/jay/smallerfile.dm3:
[testng] 01:20:47,937 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
[testng] 01:20:47,937 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:20:47,946 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-10-26_01-20-47.log]
[testng] 01:20:47,946 |-INFO in ch.qos.logback.core.sift.SiftProcessor@243e9552 - End of configuration.
[testng] [2024-10-26 01:20:48,125] [pool-1-thread-11] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-96x96.tif:
[testng] 01:20:48,125 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
[testng] 01:20:48,125 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:20:48,126 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-10-26_01-20-48.log]
[testng] 01:20:48,127 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4904264c - End of configuration.
[testng] [2024-10-26 01:20:48,976] [pool-1-thread-10] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0001.dm4:
[testng] 01:20:48,976 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
[testng] 01:20:48,976 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:20:48,977 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-10-26_01-20-48.log]
[testng] 01:20:48,977 |-INFO in ch.qos.logback.core.sift.SiftProcessor@485d9073 - End of configuration.
[testng] [2024-10-26 01:20:49,081] [pool-1-thread-9] Initializing /data/jay/biosamplefullframe.dm3:
[testng] 01:20:49,081 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
[testng] 01:20:49,081 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:20:49,082 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-10-26_01-20-49.log]
[testng] 01:20:49,082 |-INFO in ch.qos.logback.core.sift.SiftProcessor@41ac9d44 - End of configuration.
[testng] [2024-10-26 01:20:49,213] [pool-1-thread-8] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-363.dm3:
[testng] 01:20:49,213 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
[testng] 01:20:49,213 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:20:49,214 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-10-26_01-20-49.log]
[testng] 01:20:49,214 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4db84aa6 - End of configuration.
[testng] [2024-10-26 01:20:49,383] [pool-1-thread-7] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-26000X-Sindhu-364.tif:
[testng] 01:20:49,384 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
[testng] 01:20:49,384 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:20:49,384 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-10-26_01-20-49.log]
[testng] 01:20:49,385 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4dbe3b09 - End of configuration.
[testng] [2024-10-26 01:20:50,309] [pool-1-thread-6] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0014.dm4:
[testng] 01:20:50,309 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
[testng] 01:20:50,309 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:20:50,310 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-10-26_01-20-50.log]
[testng] 01:20:50,311 |-INFO in ch.qos.logback.core.sift.SiftProcessor@361b4519 - End of configuration.
[testng] [2024-10-26 01:20:50,450] [pool-1-thread-5] Initializing /data/public/imagesc-36590/SmallMontage0008.dm4:
[testng] 01:20:50,450 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
[testng] 01:20:50,450 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:20:50,451 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-10-26_01-20-50.log]
[testng] 01:20:50,451 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4f886058 - End of configuration.
[testng] [2024-10-26 01:20:50,587] [pool-1-thread-4] Initializing /data/melissa/annotation-test.tif:
[testng] 01:20:50,587 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
[testng] 01:20:50,587 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:20:50,588 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-10-26_01-20-50.log]
[testng] 01:20:50,589 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2c6e3370 - End of configuration.
[testng] [2024-10-26 01:20:51,373] [pool-1-thread-3] Initializing /data/jay/Carbon.34.dm3:
[testng] 01:20:51,373 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
[testng] 01:20:51,373 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:20:51,373 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-10-26_01-20-51.log]
[testng] 01:20:51,374 |-INFO in ch.qos.logback.core.sift.SiftProcessor@8364c3c - End of configuration.
[testng] [2024-10-26 01:20:51,491] [pool-1-thread-2] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0046.dm4:
[testng] 01:20:51,491 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
[testng] 01:20:51,491 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:20:51,492 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-10-26_01-20-51.log]
[testng] 01:20:51,492 |-INFO in ch.qos.logback.core.sift.SiftProcessor@35dffa3d - End of configuration.
[testng] [2024-10-26 01:20:55,344] [pool-1-thread-5] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0017.dm4:
[testng] [2024-10-26 01:20:55,588] [pool-1-thread-12] Initializing /data/samples/mode-metadata/mode_format_test.dm3:
[testng] [2024-10-26 01:20:56,322] [pool-1-thread-6] Initializing /data/public/EMPIAR/EMPIAR-10013/BGal_000438_frames.dm4:
[testng] [2024-10-26 01:20:56,471] [pool-1-thread-10] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0047.dm4:
[testng] [2024-10-26 01:20:57,643] [pool-1-thread-8] Initializing /data/jay/dnasample.tif:
[testng] [2024-10-26 01:20:59,032] [pool-1-thread-3] Initializing /data/public/imagesc-36590/SmallMontage0004.dm4:
[testng] [2024-10-26 01:20:59,232] [pool-1-thread-9] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0019.dm4:
[testng] [2024-10-26 01:20:59,399] [pool-1-thread-1] Initializing /data/imagesc-3719/Heart_BSE_slice_0019.dm4:
[testng] [2024-10-26 01:20:59,786] [pool-1-thread-4] Initializing /data/jay/DMtest2.dm3:
[testng] [2024-10-26 01:21:00,245] [pool-1-thread-11] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0005.dm4:
[testng] [2024-10-26 01:21:00,955] [pool-1-thread-5] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0045.dm4:
[testng] [2024-10-26 01:21:01,322] [pool-1-thread-12] Initializing /data/jay/recAmaghi.dm3:
[testng] [2024-10-26 01:21:02,279] [pool-1-thread-3] Initializing /data/jay/ViewDMtest.dm3:
[testng] [2024-10-26 01:21:04,040] [pool-1-thread-7] Initializing /data/jay/samples/APC2a-e3.dm3:
[testng] [2024-10-26 01:21:04,615] [pool-1-thread-9] Initializing /data/samples/test-tiles.dm3:
[testng] [2024-10-26 01:21:05,164] [pool-1-thread-11] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0016.dm4:
[testng] [2024-10-26 01:21:06,124] [pool-1-thread-6] Initializing /data/qa-21647/Sample2_L1-0002.dm4:
[testng] [2024-10-26 01:21:06,578] [pool-1-thread-4] Initializing /data/nuno/Prefix_3VBSED_slice_0011.dm3:
[testng] [2024-10-26 01:21:06,865] [pool-1-thread-9] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-256x256.tif:
[testng] [2024-10-26 01:21:07,832] [pool-1-thread-1] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-362.tif:
[testng] [2024-10-26 01:21:08,820] [pool-1-thread-7] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-360.dm3:
[testng] [2024-10-26 01:21:09,078] [pool-1-thread-12] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0049.dm4:
[testng] [2024-10-26 01:21:09,580] [pool-1-thread-3] Initializing /data/public/imagesc-36590/SmallMontage0006.dm4:
[testng] [2024-10-26 01:21:10,051] [pool-1-thread-11] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0015.dm4:
[testng] [2024-10-26 01:21:10,395] [pool-1-thread-6] Initializing /data/jayne/AM-2/MonGb3-S1.dm3:
[testng] [2024-10-26 01:21:11,287] [pool-1-thread-4] Initializing /data/imagesc-3719/Prefix_BSE_slice_0001.dm4:
[testng] [2024-10-26 01:21:12,076] [pool-1-thread-2] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0051.dm4:
[testng] [2024-10-26 01:21:12,282] [pool-1-thread-8] Initializing /data/jayne/AM-2/MonGb2-S7.dm3:
[testng] [2024-10-26 01:21:12,874] [pool-1-thread-3] Initializing /data/jay/samples/APC2a-e3.tif:
[testng] [2024-10-26 01:21:15,339] [pool-1-thread-7] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-360.tif:
[testng] [2024-10-26 01:21:16,955] [pool-1-thread-11] Initializing /data/melissa/annotation-test.dm3:
[testng] [2024-10-26 01:21:18,092] [pool-1-thread-9] Initializing /data/sindhu/cropped/JC76-G1-80000.0V-15000X-Sindhu-362-1020x1020.tif:
[testng] [2024-10-26 01:21:19,201] [pool-1-thread-10] Initializing /data/nuno/Prefix_3VBSED_stack_30_slice_0290.dm3:
[testng] [2024-10-26 01:21:19,582] [pool-1-thread-6] Initializing /data/ofra/lowloss.dm3:
[testng] [2024-10-26 01:21:19,873] [pool-1-thread-8] Initializing /data/qa-8007/Prefix_3VBSED_slice_0011.dm3:
[testng] [2024-10-26 01:21:20,134] [pool-1-thread-5] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0050.dm4:
[testng] [2024-10-26 01:21:20,485] [pool-1-thread-11] Initializing /data/jay/recAmag6500dm.dm3:
[testng] [2024-10-26 01:21:22,367] [pool-1-thread-6] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0013.dm4:
[testng] [2024-10-26 01:21:22,545] [pool-1-thread-8] Initializing /data/jay/graphitedm3.dm3:
[testng] [2024-10-26 01:21:23,567] [pool-1-thread-1] Initializing /data/public/imagesc-36590/SmallMontage0007.dm4:
[testng] [2024-10-26 01:21:24,509] [pool-1-thread-3] Initializing /data/jay/biosamplefullframetif.tif:
[testng] [2024-10-26 01:21:25,830] [pool-1-thread-12] Initializing /data/qa-11392/Example_Gatan_File.dm4:
[testng] [2024-10-26 01:21:26,352] [pool-1-thread-11] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-360.tif:
[testng] [2024-10-26 01:21:27,591] [pool-1-thread-4] Initializing /data/jay/dnasample1.dm3:
[testng] [2024-10-26 01:21:27,767] [pool-1-thread-6] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0008.dm4:
[testng] [2024-10-26 01:21:27,997] [pool-1-thread-1] Initializing /data/sindhu/cropped/JC76-G1-80000.0V-15000X-Sindhu-362-799x799.tif:
[testng] [2024-10-26 01:21:28,999] [pool-1-thread-9] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0002.dm4:
[testng] [2024-10-26 01:21:29,315] [pool-1-thread-10] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0003.dm4:
[testng] [2024-10-26 01:21:29,501] [pool-1-thread-2] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0007.dm4:
[testng] [2024-10-26 01:21:29,829] [pool-1-thread-8] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-362.tif:
[testng] [2024-10-26 01:21:30,879] [pool-1-thread-7] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0000.dm4:
[testng] [2024-10-26 01:21:32,504] [pool-1-thread-9] Initializing /data/qa-21652/E coli phage H2O_100000.0V_67000X.tif:
[testng] [2024-10-26 01:21:33,541] [pool-1-thread-10] Initializing /data/jayne/AM-2/MonGb3-S3.dm3:
[testng] [2024-10-26 01:21:33,679] [pool-1-thread-6] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0053.dm4:
[testng] [2024-10-26 01:21:34,141] [pool-1-thread-2] Initializing /data/jay/samples/APC2a-e5.dm3:
[testng] [2024-10-26 01:21:34,361] [pool-1-thread-4] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0012.dm4:
[testng] [2024-10-26 01:21:34,693] [pool-1-thread-7] Initializing /data/public/imagesc-36590/SmallMontage0002.dm4:
[testng] [2024-10-26 01:21:35,225] [pool-1-thread-5] Initializing /data/thorsten/60kx_HAADF_03.dm3:
[testng] [2024-10-26 01:21:36,818] [pool-1-thread-2] Initializing /data/qa-7642/8.dm4:
[testng] [2024-10-26 01:21:37,005] [pool-1-thread-7] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0052.dm4:
[testng] [2024-10-26 01:21:37,168] [pool-1-thread-3] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0048.dm4:
[testng] [2024-10-26 01:21:37,324] [pool-1-thread-1] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-128x128.tif:
[testng] [2024-10-26 01:21:38,344] [pool-1-thread-4] Initializing /data/public/imagesc-36590/SmallMontage0005.dm4:
[testng] [2024-10-26 01:21:38,763] [pool-1-thread-5] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0004.dm4:
[testng] [2024-10-26 01:21:39,260] [pool-1-thread-10] Initializing /data/qa-21761/example.dm4:
[testng] [2024-10-26 01:21:39,419] [pool-1-thread-11] Initializing /data/jayne/AM-2/MonGb2-S8.dm3:
[testng] [2024-10-26 01:21:40,856] [pool-1-thread-4] Initializing /data/public/imagesc-36590/SmallMontage0003.dm4:
[testng] [2024-10-26 01:21:41,040] [pool-1-thread-2] Initializing /data/jay/samples/APC2a-e4.tif:
[testng] [2024-10-26 01:21:43,108] [pool-1-thread-8] Initializing /data/qa-21652/E coli phage H2O_100000.0V_67000X.dm4:
[testng] [2024-10-26 01:21:43,267] [pool-1-thread-10] Initializing /data/jayne/AM-2/MonGb2-S9.dm3:
[testng] [2024-10-26 01:21:43,415] [pool-1-thread-9] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0011.dm4:
[testng] [2024-10-26 01:21:43,610] [pool-1-thread-12] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0010.dm4:
[testng] [2024-10-26 01:21:44,266] [pool-1-thread-5] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-480x480.tif:
[testng] [2024-10-26 01:21:45,520] [pool-1-thread-4] Initializing /data/jay/camtest1.dm3:
[testng] [2024-10-26 01:21:45,954] [pool-1-thread-11] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0009.dm4:
[testng] [2024-10-26 01:21:46,379] [pool-1-thread-8] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-362-smaller.tif:
[testng] [2024-10-26 01:21:47,382] [pool-1-thread-1] Initializing /data/jay/samples/APC2a-e4.dm3:
[testng] [2024-10-26 01:21:47,677] [pool-1-thread-6] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-364.tif:
[testng] [2024-10-26 01:21:48,935] [pool-1-thread-12] Initializing /data/public/imagesc-36590/SmallMontage0001.dm4:
[testng] [2024-10-26 01:21:49,078] [pool-1-thread-9] Initializing /data/chip/Nanogold-1.dm3:
[testng] [2024-10-26 01:21:49,421] [pool-1-thread-10] Initializing /data/jay/DMtest.dm3:
[testng] [2024-10-26 01:21:50,215] [pool-1-thread-11] Initializing /data/ofra/Co on INT 28-12-10.11.dm3:
[testng] [2024-10-26 01:21:50,390] [pool-1-thread-1] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0006.dm4:
[testng] [2024-10-26 01:21:50,861] [pool-1-thread-2] Initializing /data/public/imagesc-36590/SmallMontage0000.dm4:
[testng] [2024-10-26 01:21:51,252] [pool-1-thread-12] Initializing /data/jay/samples/APC2a-e5.tif:
[testng] [2024-10-26 01:21:52,346] [pool-1-thread-7] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0018.dm4:
[testng]
[testng] ===============================================
[testng] Bio-Formats software test suite
[testng] Total tests run: 5194, Failures: 0, Skips: 0
[testng] ===============================================
[testng]
BUILD SUCCESSFUL
Total time: 1 minute 37 seconds
Finished: SUCCESS