Started by upstream project "BIOFORMATS-test-repo" build number 238
originally caused by:
Started by upstream project "Trigger" build number 263
originally caused by:
Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@5
[BIOFORMATS-test-folder@5] $ /bin/bash -xe /tmp/jenkins14447204012381175262.sh
+ '[' gatan = slidebook ']'
++ date +%u
+ '[' 2 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_37351_merge_ci -v /uod/idr/repos/curated/gatan:/data -v /uod/idr-scratch/merge-ci/curated/gatan:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
[echo] isSnapshot = true
init-title:
[echo] ----------=========== bio-formats-testing-framework ===========----------
init-timestamp:
init:
copy-resources:
compile:
[resolver:resolve] Resolving artifacts
compile-tests:
[resolver:resolve] Resolving artifacts
[javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
[javac] warning: [options] bootstrap class path not set in conjunction with -source 8
[javac] 1 warning
test-automated:
[testng] WARNING: An illegal reflective access operation has occurred
[testng] WARNING: Illegal reflective access by org.kohsuke.file_leak_detector.Listener (file:/home/build/.m2/repository/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar) to field java.net.SocketImpl.socket
[testng] WARNING: Please consider reporting this to the maintainers of org.kohsuke.file_leak_detector.Listener
[testng] WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations
[testng] WARNING: All illegal access operations will be denied in a future release
[testng] File leak detector installed
[testng] 00:20:31,799 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
[testng] 00:20:31,801 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - No custom configurators were discovered as a service.
[testng] 00:20:31,801 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 00:20:31,802 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 00:20:31,803 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
[testng] 00:20:31,803 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
[testng] 00:20:31,804 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 2 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
[testng] 00:20:31,804 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 00:20:31,804 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 00:20:31,805 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
[testng] 00:20:31,805 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
[testng] 00:20:31,805 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
[testng] 00:20:31,976 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
[testng] 00:20:31,976 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
[testng] 00:20:31,998 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
[testng] 00:20:31,998 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
[testng] 00:20:32,004 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
[testng] 00:20:32,004 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
[testng] 00:20:32,004 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
[testng] 00:20:32,005 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
[testng] 00:20:32,005 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@45099dd3 - End of configuration.
[testng] 00:20:32,005 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@60099951 - Registering current configuration as safe fallback point
[testng] 00:20:32,005 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 201 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
[testng] [2024-10-29 00:20:32,015] [main] java.version = 11.0.16
[testng] 00:20:32,018 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
[testng] 00:20:32,018 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:20:32,060 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-10-29_00-20-32.log]
[testng] 00:20:32,061 |-INFO in ch.qos.logback.core.sift.SiftProcessor@21be3395 - End of configuration.
[testng] [2024-10-29 00:20:32,063] [main] testng.directory = /data
[testng] [2024-10-29 00:20:32,063] [main] testng.configDirectory = /config
[testng] [2024-10-29 00:20:32,073] [main] testng.multiplier = 1.0
[testng] [2024-10-29 00:20:32,075] [main] testng.in-memory = false
[testng] [2024-10-29 00:20:32,075] [main] testng.allow-missing = false
[testng] [2024-10-29 00:20:32,075] [main] user.language = en
[testng] [2024-10-29 00:20:32,075] [main] user.country = ${user.country}
[testng] [2024-10-29 00:20:32,075] [main] Maximum heap size = 15360 MB
[testng] Scanning for files...
[testng] [2024-10-29 00:20:35,258] [main] ----------------------------------------
[testng] [2024-10-29 00:20:35,258] [main] Total files: 103
[testng] [2024-10-29 00:20:35,258] [main] Scan time: 3.183 s (30 ms/file)
[testng] [2024-10-29 00:20:35,258] [main] ----------------------------------------
[testng] Building list of tests...
[testng] Ready to test 98 files
[testng] [TestNG] Running:
[testng] Bio-Formats software test suite
[testng]
[testng] [2024-10-29 00:20:54,108] [pool-1-thread-1] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-364.dm3:
[testng] 00:20:54,109 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
[testng] 00:20:54,109 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:20:54,111 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-10-29_00-20-54.log]
[testng] 00:20:54,111 |-INFO in ch.qos.logback.core.sift.SiftProcessor@18724774 - End of configuration.
[testng] [2024-10-29 00:20:54,240] [pool-1-thread-12] Initializing /data/jay/smallerfile.dm3:
[testng] 00:20:54,240 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
[testng] 00:20:54,240 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:20:54,259 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-10-29_00-20-54.log]
[testng] 00:20:54,260 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6efb14cb - End of configuration.
[testng] [2024-10-29 00:20:54,428] [pool-1-thread-11] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-96x96.tif:
[testng] 00:20:54,428 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
[testng] 00:20:54,428 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:20:54,429 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-10-29_00-20-54.log]
[testng] 00:20:54,429 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6bc152a7 - End of configuration.
[testng] [2024-10-29 00:20:55,231] [pool-1-thread-10] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0001.dm4:
[testng] 00:20:55,232 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
[testng] 00:20:55,232 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:20:55,232 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-10-29_00-20-55.log]
[testng] 00:20:55,233 |-INFO in ch.qos.logback.core.sift.SiftProcessor@753ed5f9 - End of configuration.
[testng] [2024-10-29 00:20:55,361] [pool-1-thread-9] Initializing /data/jay/biosamplefullframe.dm3:
[testng] 00:20:55,362 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
[testng] 00:20:55,362 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:20:55,362 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-10-29_00-20-55.log]
[testng] 00:20:55,363 |-INFO in ch.qos.logback.core.sift.SiftProcessor@61f8351 - End of configuration.
[testng] [2024-10-29 00:20:55,506] [pool-1-thread-8] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-363.dm3:
[testng] 00:20:55,506 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
[testng] 00:20:55,506 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:20:55,506 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-10-29_00-20-55.log]
[testng] 00:20:55,507 |-INFO in ch.qos.logback.core.sift.SiftProcessor@57159334 - End of configuration.
[testng] [2024-10-29 00:20:55,640] [pool-1-thread-7] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-26000X-Sindhu-364.tif:
[testng] 00:20:55,640 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
[testng] 00:20:55,641 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:20:55,641 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-10-29_00-20-55.log]
[testng] 00:20:55,641 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4ebc06b4 - End of configuration.
[testng] [2024-10-29 00:20:56,575] [pool-1-thread-6] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0014.dm4:
[testng] 00:20:56,576 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
[testng] 00:20:56,576 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:20:56,577 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-10-29_00-20-56.log]
[testng] 00:20:56,577 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7f07fc19 - End of configuration.
[testng] [2024-10-29 00:20:56,731] [pool-1-thread-5] Initializing /data/public/imagesc-36590/SmallMontage0008.dm4:
[testng] 00:20:56,732 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
[testng] 00:20:56,732 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:20:56,732 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-10-29_00-20-56.log]
[testng] 00:20:56,733 |-INFO in ch.qos.logback.core.sift.SiftProcessor@10221a1d - End of configuration.
[testng] [2024-10-29 00:20:56,866] [pool-1-thread-4] Initializing /data/melissa/annotation-test.tif:
[testng] 00:20:56,866 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
[testng] 00:20:56,866 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:20:56,867 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-10-29_00-20-56.log]
[testng] 00:20:56,867 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4f6bbd77 - End of configuration.
[testng] [2024-10-29 00:20:57,726] [pool-1-thread-3] Initializing /data/jay/Carbon.34.dm3:
[testng] 00:20:57,726 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
[testng] 00:20:57,726 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:20:57,727 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-10-29_00-20-57.log]
[testng] 00:20:57,727 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1f8054c7 - End of configuration.
[testng] [2024-10-29 00:20:57,830] [pool-1-thread-2] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0046.dm4:
[testng] 00:20:57,830 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
[testng] 00:20:57,830 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:20:57,831 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-10-29_00-20-57.log]
[testng] 00:20:57,831 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3e8584b3 - End of configuration.
[testng] [2024-10-29 00:21:01,731] [pool-1-thread-5] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0017.dm4:
[testng] [2024-10-29 00:21:02,362] [pool-1-thread-12] Initializing /data/samples/mode-metadata/mode_format_test.dm3:
[testng] [2024-10-29 00:21:02,909] [pool-1-thread-10] Initializing /data/public/EMPIAR/EMPIAR-10013/BGal_000438_frames.dm4:
[testng] [2024-10-29 00:21:03,030] [pool-1-thread-6] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0047.dm4:
[testng] [2024-10-29 00:21:03,576] [pool-1-thread-8] Initializing /data/jay/dnasample.tif:
[testng] [2024-10-29 00:21:04,568] [pool-1-thread-4] Initializing /data/imagesc-3719/Heart_BSE_slice_0019.dm4:
[testng] [2024-10-29 00:21:04,716] [pool-1-thread-11] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0019.dm4:
[testng] [2024-10-29 00:21:04,836] [pool-1-thread-1] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0005.dm4:
[testng] [2024-10-29 00:21:04,998] [pool-1-thread-9] Initializing /data/jay/DMtest2.dm3:
[testng] [2024-10-29 00:21:05,112] [pool-1-thread-3] Initializing /data/public/imagesc-36590/SmallMontage0004.dm4:
[testng] [2024-10-29 00:21:06,591] [pool-1-thread-5] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0045.dm4:
[testng] [2024-10-29 00:21:08,013] [pool-1-thread-3] Initializing /data/jay/recAmaghi.dm3:
[testng] [2024-10-29 00:21:09,651] [pool-1-thread-1] Initializing /data/jay/ViewDMtest.dm3:
[testng] [2024-10-29 00:21:09,831] [pool-1-thread-11] Initializing /data/jay/samples/APC2a-e3.dm3:
[testng] [2024-10-29 00:21:10,106] [pool-1-thread-7] Initializing /data/samples/test-tiles.dm3:
[testng] [2024-10-29 00:21:10,408] [pool-1-thread-12] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0016.dm4:
[testng] [2024-10-29 00:21:11,317] [pool-1-thread-10] Initializing /data/qa-21647/Sample2_L1-0002.dm4:
[testng] [2024-10-29 00:21:11,807] [pool-1-thread-9] Initializing /data/nuno/Prefix_3VBSED_slice_0011.dm3:
[testng] [2024-10-29 00:21:11,998] [pool-1-thread-4] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-256x256.tif:
[testng] [2024-10-29 00:21:13,610] [pool-1-thread-11] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-362.tif:
[testng] [2024-10-29 00:21:14,650] [pool-1-thread-7] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-360.dm3:
[testng] [2024-10-29 00:21:14,922] [pool-1-thread-3] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0049.dm4:
[testng] [2024-10-29 00:21:15,339] [pool-1-thread-10] Initializing /data/public/imagesc-36590/SmallMontage0006.dm4:
[testng] [2024-10-29 00:21:15,774] [pool-1-thread-12] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0015.dm4:
[testng] [2024-10-29 00:21:15,947] [pool-1-thread-1] Initializing /data/jayne/AM-2/MonGb3-S1.dm3:
[testng] [2024-10-29 00:21:17,116] [pool-1-thread-9] Initializing /data/imagesc-3719/Prefix_BSE_slice_0001.dm4:
[testng] [2024-10-29 00:21:18,030] [pool-1-thread-8] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0051.dm4:
[testng] [2024-10-29 00:21:18,502] [pool-1-thread-10] Initializing /data/jayne/AM-2/MonGb2-S7.dm3:
[testng] [2024-10-29 00:21:20,440] [pool-1-thread-2] Initializing /data/jay/samples/APC2a-e3.tif:
[testng] [2024-10-29 00:21:21,972] [pool-1-thread-6] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-360.tif:
[testng] [2024-10-29 00:21:23,375] [pool-1-thread-4] Initializing /data/melissa/annotation-test.dm3:
[testng] [2024-10-29 00:21:23,643] [pool-1-thread-12] Initializing /data/sindhu/cropped/JC76-G1-80000.0V-15000X-Sindhu-362-1020x1020.tif:
[testng] [2024-10-29 00:21:24,863] [pool-1-thread-5] Initializing /data/nuno/Prefix_3VBSED_stack_30_slice_0290.dm3:
[testng] [2024-10-29 00:21:25,037] [pool-1-thread-7] Initializing /data/ofra/lowloss.dm3:
[testng] [2024-10-29 00:21:25,334] [pool-1-thread-1] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0050.dm4:
[testng] [2024-10-29 00:21:26,283] [pool-1-thread-4] Initializing /data/qa-8007/Prefix_3VBSED_slice_0011.dm3:
[testng] [2024-10-29 00:21:26,492] [pool-1-thread-10] Initializing /data/jay/recAmag6500dm.dm3:
[testng] [2024-10-29 00:21:27,969] [pool-1-thread-7] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0013.dm4:
[testng] [2024-10-29 00:21:28,814] [pool-1-thread-11] Initializing /data/jay/graphitedm3.dm3:
[testng] [2024-10-29 00:21:29,732] [pool-1-thread-4] Initializing /data/public/imagesc-36590/SmallMontage0007.dm4:
[testng] [2024-10-29 00:21:30,879] [pool-1-thread-2] Initializing /data/jay/biosamplefullframetif.tif:
[testng] [2024-10-29 00:21:32,650] [pool-1-thread-7] Initializing /data/qa-11392/Example_Gatan_File.dm4:
[testng] [2024-10-29 00:21:32,928] [pool-1-thread-10] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-360.tif:
[testng] [2024-10-29 00:21:34,063] [pool-1-thread-12] Initializing /data/jay/dnasample1.dm3:
[testng] [2024-10-29 00:21:34,270] [pool-1-thread-4] Initializing /data/sindhu/cropped/JC76-G1-80000.0V-15000X-Sindhu-362-799x799.tif:
[testng] [2024-10-29 00:21:35,460] [pool-1-thread-9] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0008.dm4:
[testng] [2024-10-29 00:21:35,629] [pool-1-thread-3] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0002.dm4:
[testng] [2024-10-29 00:21:35,847] [pool-1-thread-11] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0003.dm4:
[testng] [2024-10-29 00:21:36,104] [pool-1-thread-5] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0007.dm4:
[testng] [2024-10-29 00:21:36,355] [pool-1-thread-8] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-362.tif:
[testng] [2024-10-29 00:21:37,564] [pool-1-thread-6] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0000.dm4:
[testng] [2024-10-29 00:21:39,520] [pool-1-thread-11] Initializing /data/qa-21652/E coli phage H2O_100000.0V_67000X.tif:
[testng] [2024-10-29 00:21:40,443] [pool-1-thread-3] Initializing /data/jayne/AM-2/MonGb3-S3.dm3:
[testng] [2024-10-29 00:21:40,616] [pool-1-thread-9] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0053.dm4:
[testng] [2024-10-29 00:21:40,810] [pool-1-thread-1] Initializing /data/jay/samples/APC2a-e5.dm3:
[testng] [2024-10-29 00:21:41,001] [pool-1-thread-5] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0012.dm4:
[testng] [2024-10-29 00:21:41,304] [pool-1-thread-6] Initializing /data/public/imagesc-36590/SmallMontage0002.dm4:
[testng] [2024-10-29 00:21:41,529] [pool-1-thread-12] Initializing /data/thorsten/60kx_HAADF_03.dm3:
[testng] [2024-10-29 00:21:42,876] [pool-1-thread-4] Initializing /data/qa-7642/8.dm4:
[testng] [2024-10-29 00:21:43,313] [pool-1-thread-1] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0052.dm4:
[testng] [2024-10-29 00:21:43,633] [pool-1-thread-2] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0048.dm4:
[testng] [2024-10-29 00:21:43,796] [pool-1-thread-6] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-128x128.tif:
[testng] [2024-10-29 00:21:45,439] [pool-1-thread-12] Initializing /data/public/imagesc-36590/SmallMontage0005.dm4:
[testng] [2024-10-29 00:21:46,217] [pool-1-thread-5] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0004.dm4:
[testng] [2024-10-29 00:21:46,526] [pool-1-thread-10] Initializing /data/qa-21761/example.dm4:
[testng] [2024-10-29 00:21:46,689] [pool-1-thread-3] Initializing /data/jayne/AM-2/MonGb2-S8.dm3:
[testng] [2024-10-29 00:21:47,889] [pool-1-thread-12] Initializing /data/public/imagesc-36590/SmallMontage0003.dm4:
[testng] [2024-10-29 00:21:48,177] [pool-1-thread-4] Initializing /data/jay/samples/APC2a-e4.tif:
[testng] [2024-10-29 00:21:49,877] [pool-1-thread-11] Initializing /data/qa-21652/E coli phage H2O_100000.0V_67000X.dm4:
[testng] [2024-10-29 00:21:50,322] [pool-1-thread-10] Initializing /data/jayne/AM-2/MonGb2-S9.dm3:
[testng] [2024-10-29 00:21:50,468] [pool-1-thread-8] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0011.dm4:
[testng] [2024-10-29 00:21:50,650] [pool-1-thread-7] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0010.dm4:
[testng] [2024-10-29 00:21:51,369] [pool-1-thread-5] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-480x480.tif:
[testng] [2024-10-29 00:21:52,567] [pool-1-thread-12] Initializing /data/jay/camtest1.dm3:
[testng] [2024-10-29 00:21:53,067] [pool-1-thread-6] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0009.dm4:
[testng] [2024-10-29 00:21:53,211] [pool-1-thread-3] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-362-smaller.tif:
[testng] [2024-10-29 00:21:54,307] [pool-1-thread-11] Initializing /data/jay/samples/APC2a-e4.dm3:
[testng] [2024-10-29 00:21:55,064] [pool-1-thread-7] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-364.tif:
[testng] [2024-10-29 00:21:56,016] [pool-1-thread-8] Initializing /data/public/imagesc-36590/SmallMontage0001.dm4:
[testng] [2024-10-29 00:21:56,443] [pool-1-thread-10] Initializing /data/chip/Nanogold-1.dm3:
[testng] [2024-10-29 00:21:56,604] [pool-1-thread-9] Initializing /data/jay/DMtest.dm3:
[testng] [2024-10-29 00:21:57,604] [pool-1-thread-11] Initializing /data/ofra/Co on INT 28-12-10.11.dm3:
[testng] [2024-10-29 00:21:57,801] [pool-1-thread-6] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0006.dm4:
[testng] [2024-10-29 00:21:58,175] [pool-1-thread-8] Initializing /data/public/imagesc-36590/SmallMontage0000.dm4:
[testng] [2024-10-29 00:21:58,358] [pool-1-thread-4] Initializing /data/jay/samples/APC2a-e5.tif:
[testng] [2024-10-29 00:21:59,640] [pool-1-thread-1] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0018.dm4:
[testng]
[testng] ===============================================
[testng] Bio-Formats software test suite
[testng] Total tests run: 5194, Failures: 0, Skips: 0
[testng] ===============================================
[testng]
BUILD SUCCESSFUL
Total time: 1 minute 38 seconds
Finished: SUCCESS