Started by upstream project "BIOFORMATS-test-repo" build number 238 originally caused by: Started by upstream project "Trigger" build number 263 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@3 [BIOFORMATS-test-folder@3] $ /bin/bash -xe /tmp/jenkins13648419505221624205.sh + '[' fv1000 = slidebook ']' ++ date +%u + '[' 2 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_37390_merge_ci -v /uod/idr/repos/curated/fv1000:/data -v /uod/idr-scratch/merge-ci/curated/fv1000:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] 1 warning test-automated: [testng] WARNING: An illegal reflective access operation has occurred [testng] WARNING: Illegal reflective access by org.kohsuke.file_leak_detector.Listener (file:/home/build/.m2/repository/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar) to field java.net.SocketImpl.socket [testng] WARNING: Please consider reporting this to the maintainers of org.kohsuke.file_leak_detector.Listener [testng] WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations [testng] WARNING: All illegal access operations will be denied in a future release [testng] File leak detector installed [testng] 00:41:15,239 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 00:41:15,241 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - No custom configurators were discovered as a service. [testng] 00:41:15,241 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 00:41:15,242 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 00:41:15,243 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 00:41:15,243 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 00:41:15,244 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 2 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 00:41:15,244 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 00:41:15,244 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 00:41:15,245 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 00:41:15,245 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 00:41:15,246 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 00:41:15,423 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 00:41:15,423 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 00:41:15,446 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 00:41:15,447 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 00:41:15,453 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 00:41:15,453 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 00:41:15,453 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 00:41:15,454 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 00:41:15,454 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@45099dd3 - End of configuration. [testng] 00:41:15,454 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@60099951 - Registering current configuration as safe fallback point [testng] 00:41:15,454 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 210 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-10-29 00:41:15,464] [main] java.version = 11.0.16 [testng] 00:41:15,467 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 00:41:15,467 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:41:15,517 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-10-29_00-41-15.log] [testng] 00:41:15,519 |-INFO in ch.qos.logback.core.sift.SiftProcessor@21be3395 - End of configuration. [testng] [2024-10-29 00:41:15,521] [main] testng.directory = /data [testng] [2024-10-29 00:41:15,521] [main] testng.configDirectory = /config [testng] [2024-10-29 00:41:15,531] [main] testng.multiplier = 1.0 [testng] [2024-10-29 00:41:15,533] [main] testng.in-memory = false [testng] [2024-10-29 00:41:15,533] [main] testng.allow-missing = false [testng] [2024-10-29 00:41:15,533] [main] user.language = en [testng] [2024-10-29 00:41:15,533] [main] user.country = ${user.country} [testng] [2024-10-29 00:41:15,533] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2024-10-29 00:41:26,658] [main] ---------------------------------------- [testng] [2024-10-29 00:41:26,658] [main] Total files: 259 [testng] [2024-10-29 00:41:26,658] [main] Scan time: 11.125 s (42 ms/file) [testng] [2024-10-29 00:41:26,659] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 144 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-10-29 00:47:34,364] [pool-1-thread-1] Initializing /data/brian/CagedATP CaG7.oib: [testng] 00:47:34,364 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 00:47:34,365 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:47:34,368 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-10-29_00-47-34.log] [testng] 00:47:34,368 |-INFO in ch.qos.logback.core.sift.SiftProcessor@48413560 - End of configuration. [testng] [2024-10-29 00:47:34,586] [pool-1-thread-12] Initializing /data/aryeh/030408 2 1.oib: [testng] 00:47:34,586 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 00:47:34,587 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:47:34,588 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-10-29_00-47-34.log] [testng] 00:47:34,588 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6aadeca9 - End of configuration. [testng] [2024-10-29 00:47:34,848] [pool-1-thread-11] Initializing /data/molly/13SH2bUTRtime4b.oib: [testng] 00:47:34,848 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 00:47:34,849 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:47:34,849 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-10-29_00-47-34.log] [testng] 00:47:34,850 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7782f36 - End of configuration. [testng] [2024-10-29 00:47:35,314] [pool-1-thread-10] Initializing /data/marc/V0606J.oib: [testng] 00:47:35,314 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 00:47:35,314 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:47:35,315 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-10-29_00-47-35.log] [testng] 00:47:35,315 |-INFO in ch.qos.logback.core.sift.SiftProcessor@13688d1d - End of configuration. [testng] [2024-10-29 00:47:36,759] [pool-1-thread-9] Initializing /data/johannes/step4.bmp: [testng] 00:47:36,759 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 00:47:36,759 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:47:36,759 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-10-29_00-47-36.log] [testng] 00:47:36,760 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7fb278b6 - End of configuration. [testng] [2024-10-29 00:47:36,778] [pool-1-thread-8] Initializing /data/karl/Image0009.oib: [testng] 00:47:36,778 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 00:47:36,778 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:47:36,779 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-10-29_00-47-36.log] [testng] 00:47:36,779 |-INFO in ch.qos.logback.core.sift.SiftProcessor@451b92fa - End of configuration. [testng] [2024-10-29 00:47:36,907] [pool-1-thread-7] Initializing /data/aryeh/naomi/Brain 2 he1d 1.oib: [testng] 00:47:36,907 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 00:47:36,908 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:47:36,908 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-10-29_00-47-36.log] [testng] 00:47:36,908 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4e92eb63 - End of configuration. [testng] [2024-10-29 00:47:37,298] [pool-1-thread-6] Initializing /data/aryeh/061010 plate 1/Image0002_07.oib: [testng] 00:47:37,299 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 00:47:37,299 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:47:37,299 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-10-29_00-47-37.log] [testng] 00:47:37,300 |-INFO in ch.qos.logback.core.sift.SiftProcessor@716a12d3 - End of configuration. [testng] [2024-10-29 00:47:37,651] [pool-1-thread-5] Initializing /data/molly/11OCT2.OIF: [testng] 00:47:37,651 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 00:47:37,651 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:47:37,651 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-10-29_00-47-37.log] [testng] 00:47:37,652 |-INFO in ch.qos.logback.core.sift.SiftProcessor@60e0119a - End of configuration. [testng] [2024-10-29 00:47:41,508] [pool-1-thread-4] Initializing /data/shane/Data Subset/MHC1_control.oif: [testng] 00:47:41,508 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 00:47:41,509 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:47:41,509 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-10-29_00-47-41.log] [testng] 00:47:41,509 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6a8b0dee - End of configuration. [testng] [2024-10-29 00:47:41,636] [pool-1-thread-3] Initializing /data/glen/15min 200neo lyso SO1.oib: [testng] 00:47:41,636 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 00:47:41,636 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:47:41,637 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-10-29_00-47-41.log] [testng] 00:47:41,637 |-INFO in ch.qos.logback.core.sift.SiftProcessor@55ad0364 - End of configuration. [testng] [2024-10-29 00:47:41,791] [pool-1-thread-2] Initializing /data/brian/Lambda10nm.oib: [testng] 00:47:41,792 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 00:47:41,792 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:47:41,792 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-10-29_00-47-41.log] [testng] 00:47:41,793 |-INFO in ch.qos.logback.core.sift.SiftProcessor@48823ae1 - End of configuration. [testng] [2024-10-29 00:47:44,219] [pool-1-thread-9] Initializing /data/jcb/200909024/Sup Fig 2/2.oib: [testng] [2024-10-29 00:47:44,407] [pool-1-thread-2] Initializing /data/molly/11OCT4.OIF: [testng] [2024-10-29 00:47:46,957] [pool-1-thread-8] Initializing /data/glen/simulstack.oif: [testng] [2024-10-29 00:47:47,619] [pool-1-thread-1] Initializing /data/brian/MitoRed-POPO3.oib: [testng] [2024-10-29 00:47:48,039] [pool-1-thread-3] Initializing /data/glen/notsaturated.oib: [testng] [2024-10-29 00:47:48,458] [pool-1-thread-12] Initializing /data/barbara/Image_with_working_import.oib: [testng] [2024-10-29 00:47:48,658] [pool-1-thread-6] Initializing /data/brian/NEURON_TIMELAPS_2.oib: [testng] [2024-10-29 00:47:49,222] [pool-1-thread-7] Initializing /data/glen/simulstack.oib: [testng] [2024-10-29 00:47:49,545] [pool-1-thread-11] Initializing /data/brian/Caged Glu-3 point.oib: [testng] [2024-10-29 00:47:51,166] [pool-1-thread-12] Initializing /data/david/Image0016.oif: [testng] [2024-10-29 00:47:51,531] [pool-1-thread-9] Initializing /data/stefan/cytosol_08b.oif: [testng] [2024-10-29 00:47:53,325] [pool-1-thread-1] Initializing /data/stefan/test-with-stefan071024.oib: [testng] [2024-10-29 00:47:54,761] [pool-1-thread-7] Initializing /data/aryeh/PIP2 ESCV control Z 1.oib: [testng] [2024-10-29 00:47:55,327] [pool-1-thread-3] Initializing /data/shane/Data Subset/EX5-10 fresh sol.oib: [testng] [2024-10-29 00:47:55,627] [pool-1-thread-11] Initializing /data/qa-17748/Image0098.oib: [testng] [2024-10-29 00:47:56,944] [pool-1-thread-6] Initializing /data/chris/missegragation-15.oib: [testng] [2024-10-29 00:47:57,178] [pool-1-thread-4] Initializing /data/simon/used_to_work.oib: [testng] [2024-10-29 00:47:58,185] [pool-1-thread-3] Initializing /data/brian/LILY POLLEN.oib: [testng] [2024-10-29 00:47:58,713] [pool-1-thread-11] Initializing /data/johannes/step5b.bmp: [testng] [2024-10-29 00:47:59,088] [pool-1-thread-10] Initializing /data/johannes/Image0010/Image0010.oif: [testng] [2024-10-29 00:48:00,001] [pool-1-thread-6] Initializing /data/molly/11OCT10.OIF: [testng] [2024-10-29 00:48:05,917] [pool-1-thread-11] Initializing /data/molly/11OCT9.OIF: [testng] [2024-10-29 00:48:14,018] [pool-1-thread-7] Initializing /data/ramon/Image_01_01_01_01.oif: [testng] [2024-10-29 00:48:15,563] [pool-1-thread-4] Initializing /data/stefan/121206_IHC_Ncad_647_in_515_WT_36hpf_e1.oib: [testng] [2024-10-29 00:48:17,413] [pool-1-thread-3] Initializing /data/stefan/yc2_live-03.oib: [testng] [2024-10-29 00:48:19,051] [pool-1-thread-1] Initializing /data/johannes/Image0006/Image0006.oif: [testng] [2024-10-29 00:48:23,069] [pool-1-thread-4] Initializing /data/shane/Data Subset/EX5-10 fresh plan.oib: [testng] [2024-10-29 00:48:25,283] [pool-1-thread-4] Initializing /data/molly/11OCT3.OIF: [testng] [2024-10-29 00:48:48,735] [pool-1-thread-3] Initializing /data/molly/11OCT7.OIF: [testng] [2024-10-29 00:48:55,588] [pool-1-thread-12] Initializing /data/johannes/Image0016/Image0016.oif: [testng] [2024-10-29 00:49:37,016] [pool-1-thread-7] Initializing /data/aryeh/PIP2 ESCV Z 1 after.oib: [testng] [2024-10-29 00:49:37,898] [pool-1-thread-10] Initializing /data/allan/62909#1.oib: [testng] [2024-10-29 00:49:38,662] [pool-1-thread-1] Initializing /data/alex/31h_pea3_fgf10_01_1.oif: [testng] [2024-10-29 00:49:41,150] [pool-1-thread-10] Initializing /data/molly/11OCT5.OIF: [testng] [2024-10-29 00:49:50,411] [pool-1-thread-7] Initializing /data/qa-17748/Image0079.oib: [testng] [2024-10-29 00:49:53,181] [pool-1-thread-7] Initializing /data/aryeh/BP3 3h ch2.oif: [testng] [2024-10-29 00:51:00,429] [pool-1-thread-12] Initializing /data/tom/RGB-1.avi: [testng] [2024-10-29 00:51:02,716] [pool-1-thread-12] Initializing /data/glen/singleseqframe.oif: [testng] [2024-10-29 00:51:41,980] [pool-1-thread-12] Initializing /data/aryeh/061010 plate 1/Image0002_01.oib: [testng] [2024-10-29 00:51:47,025] [pool-1-thread-12] Initializing /data/jae/Image0001.oib: [testng] [2024-10-29 00:51:52,729] [pool-1-thread-12] Initializing /data/shane/Data Subset/Ex3sol.oif: [testng] [2024-10-29 00:52:27,852] [pool-1-thread-12] Initializing /data/brian/PA-GFPv-2.oib: [testng] [2024-10-29 00:52:35,381] [pool-1-thread-12] Initializing /data/glen/singlesimul.oif: [testng] [2024-10-29 00:53:34,449] [pool-1-thread-12] Initializing /data/jcb/200909024/Sup Fig 2/4.oib: [testng] [2024-10-29 00:53:39,865] [pool-1-thread-12] Initializing /data/michael/CELL3.oib: [testng] [2024-10-29 00:53:44,714] [pool-1-thread-12] Initializing /data/simon/never_worked.oib: [testng] [2024-10-29 00:53:50,397] [pool-1-thread-12] Initializing /data/aryeh/control_test.oib: [testng] [2024-10-29 00:54:15,610] [pool-1-thread-12] Initializing /data/brian/lambda02nm.oib: [testng] [2024-10-29 00:54:21,059] [pool-1-thread-12] Initializing /data/stephane/817A_3-0003_01.oib: [testng] [2024-10-29 00:54:26,379] [pool-1-thread-12] Initializing /data/johannes/step1.bmp: [testng] [2024-10-29 00:54:28,867] [pool-1-thread-12] Initializing /data/dan/outerEV1solu6new.oib: [testng] [2024-10-29 00:54:34,541] [pool-1-thread-12] Initializing /data/brian/CagedATP CaG7a.oib: [testng] [2024-10-29 00:54:39,464] [pool-1-thread-12] Initializing /data/yoshihito/XY.oif: [testng] [2024-10-29 00:55:03,925] [pool-1-thread-12] Initializing /data/lavinia/NM1-RibA-RibB-side.oib: [testng] [2024-10-29 00:55:09,817] [pool-1-thread-12] Initializing /data/kashif/OIF_V1/Sample_XYZ.oif: [testng] [2024-10-29 00:57:51,336] [pool-1-thread-8] Initializing /data/glen/111407.oif: [testng] [2024-10-29 01:00:38,267] [pool-1-thread-2] Initializing /data/brian/FLIP.oib: [testng] [2024-10-29 01:00:43,312] [pool-1-thread-2] Initializing /data/glen/QuitIJ/06-1728brnc3my.oib: [testng] [2024-10-29 01:00:49,327] [pool-1-thread-2] Initializing /data/shane/Data Subset/EXX7-10G30% .oib: [testng] [2024-10-29 01:00:52,292] [pool-1-thread-2] Initializing /data/jean-claude/villositerat0heurea.oib: [testng] [2024-10-29 01:00:55,674] [pool-1-thread-2] Initializing /data/glen/Null file/test change.oif: [testng] [2024-10-29 01:01:02,350] [pool-1-thread-1] Initializing /data/aryeh/061010 plate 1/Image0002_04.oib: [testng] [2024-10-29 01:01:07,824] [pool-1-thread-1] Initializing /data/molly/11OCT8.OIF: [testng] [2024-10-29 01:01:29,738] [pool-1-thread-2] Initializing /data/paul/Day 4 1 FBS flat - cell 6 - green.oib: [testng] [2024-10-29 01:01:33,208] [pool-1-thread-2] Initializing /data/bojana/XYT_FirstBolus.oib: [testng] [2024-10-29 01:01:36,441] [pool-1-thread-2] Initializing /data/molly/11OCT6.OIF: [testng] [2024-10-29 01:02:49,559] [pool-1-thread-12] Initializing /data/glen/singlesimul.oib: [testng] [2024-10-29 01:02:51,328] [pool-1-thread-3] Initializing /data/daniel/M1(0 0 146)-r1-drift8_3-6-3s_4Hz_0.006cpp_fillfact-0.25-0.488mspl-3x.oib: [testng] [2024-10-29 01:03:01,971] [pool-1-thread-12] Initializing /data/christian/20min.oif: [testng] [2024-10-29 01:03:21,064] [pool-1-thread-12] Initializing /data/marc/V0606L.oib: [testng] [2024-10-29 01:03:28,980] [pool-1-thread-3] Initializing /data/kashif/OIF_V2/Sample_XYZ.oif: [testng] [2024-10-29 01:03:41,013] [pool-1-thread-12] Initializing /data/shane/Data Subset/NESTIN_control2.oif: [testng] [2024-10-29 01:04:02,512] [pool-1-thread-12] Initializing /data/johannes/step4b.bmp: [testng] [2024-10-29 01:04:04,348] [pool-1-thread-12] Initializing /data/barbara/Image_with_failed_import.oib: [testng] [2024-10-29 01:04:06,870] [pool-1-thread-12] Initializing /data/aryeh/1h.oib: [testng] [2024-10-29 01:04:14,397] [pool-1-thread-12] Initializing /data/brian/PA-GFP-3.oib: [testng] [2024-10-29 01:04:19,333] [pool-1-thread-12] Initializing /data/glen/QuitIJ/4202A2chtest.oif: [testng] [2024-10-29 01:04:41,783] [pool-1-thread-9] Initializing /data/johannes/Image0006/Image0006.oif.files/Image0006_Thumb.bmp: [testng] [2024-10-29 01:04:43,178] [pool-1-thread-9] Initializing /data/david/Image0016.oib: [testng] [2024-10-29 01:04:46,266] [pool-1-thread-10] Initializing /data/monica/Image0056.oif: [testng] [2024-10-29 01:04:48,356] [pool-1-thread-9] Initializing /data/glen/Image0002.oif: [testng] [2024-10-29 01:05:27,796] [pool-1-thread-10] Initializing /data/brian/Kaede-Neuron-9 405XYZ1.oib: [testng] [2024-10-29 01:05:32,620] [pool-1-thread-10] Initializing /data/yasunori/series_1.oib: [testng] [2024-10-29 01:05:37,258] [pool-1-thread-10] Initializing /data/aryeh/1h_after_pdt.oib: [testng] [2024-10-29 01:06:03,616] [pool-1-thread-10] Initializing /data/brian/CagedATP CaG+FuraR3_a.oib: [testng] [2024-10-29 01:06:07,710] [pool-1-thread-10] Initializing /data/aryeh/061010 plate 1/Image0002_09.oib: [testng] [2024-10-29 01:06:12,990] [pool-1-thread-10] Initializing /data/johannes/step3.bmp: [testng] [2024-10-29 01:06:15,310] [pool-1-thread-10] Initializing /data/satoshi/60x_5x_1.oif: [testng] [2024-10-29 01:07:46,000] [pool-1-thread-6] Initializing /data/brian/Kaede-Neuron-9XYZ.oib: [testng] [2024-10-29 01:07:50,163] [pool-1-thread-6] Initializing /data/kay/IM2pg.oib: [testng] [2024-10-29 01:07:51,568] [pool-1-thread-8] Initializing /data/aryeh/061010 plate 1/Image0002_02.oib: [testng] [2024-10-29 01:07:58,781] [pool-1-thread-6] Initializing /data/francesco/fGfp.c15.oib: [testng] [2024-10-29 01:08:00,121] [pool-1-thread-8] Initializing /data/brian/Al488-yoyo1-2.oib: [testng] [2024-10-29 01:08:04,908] [pool-1-thread-6] Initializing /data/glen/4205basal106072.oif: [testng] [2024-10-29 01:08:13,021] [pool-1-thread-8] Initializing /data/aryeh/naomi/Brain 2 he1d 1.oif: [testng] [2024-10-29 01:08:58,522] [pool-1-thread-10] Initializing /data/aryeh/061010 plate 1/Image0002_10.oib: [testng] [2024-10-29 01:09:04,141] [pool-1-thread-10] Initializing /data/glen/seqlinestack.oif: [testng] [2024-10-29 01:09:33,876] [pool-1-thread-3] Initializing /data/stefan/YC2_spectrum-405.oib: [testng] [2024-10-29 01:09:37,949] [pool-1-thread-3] Initializing /data/glen/singleseqframe.oib: [testng] [2024-10-29 01:09:41,353] [pool-1-thread-3] Initializing /data/allan/new_30min3_1z2.oib: [testng] [2024-10-29 01:09:46,239] [pool-1-thread-3] Initializing /data/pedro/plv-test.oib: [testng] [2024-10-29 01:09:50,317] [pool-1-thread-3] Initializing /data/glen/LUT issue/60x11.oif: [testng] [2024-10-29 01:12:32,472] [pool-1-thread-12] Initializing /data/glen/ticket-10092/tbn 02-10-12 D7 DT 8300 1.oif: [testng] [2024-10-29 01:13:30,100] [pool-1-thread-5] Initializing /data/brian/Rhodamine-PI-1.oib: [testng] [2024-10-29 01:13:33,482] [pool-1-thread-5] Initializing /data/yoshihito/XY.oib: [testng] [2024-10-29 01:13:36,197] [pool-1-thread-5] Initializing /data/shane/Data Subset/EXX6-10G30%.oib: [testng] [2024-10-29 01:13:39,698] [pool-1-thread-5] Initializing /data/stefan/cytosol_03e.oib: [testng] [2024-10-29 01:13:48,300] [pool-1-thread-5] Initializing /data/dan/EGFR-GFP_ptyr-555 FRET test.oib: [testng] [2024-10-29 01:13:51,993] [pool-1-thread-5] Initializing /data/glen/seqlinestack.oib: [testng] [2024-10-29 01:13:57,260] [pool-1-thread-5] Initializing /data/sten/01.oib: [testng] [2024-10-29 01:14:01,073] [pool-1-thread-5] Initializing /data/public/imagesc-71616/20220824_4492_cord_dapi__iba568_60x.oib: [testng] [2024-10-29 01:14:05,421] [pool-1-thread-5] Initializing /data/johannes/step2.bmp: [testng] [2024-10-29 01:14:07,323] [pool-1-thread-5] Initializing /data/stefan/cytosol_01a.oif: [testng] [2024-10-29 01:16:09,154] [pool-1-thread-11] Initializing /data/aryeh/061010 plate 1/Image0002_03.oib: [testng] [2024-10-29 01:16:18,636] [pool-1-thread-11] Initializing /data/brian/CFP-GFP2.oib: [testng] [2024-10-29 01:16:26,160] [pool-1-thread-11] Initializing /data/glen/Null file/test no change.oif: [testng] [2024-10-29 01:17:06,244] [pool-1-thread-11] Initializing /data/brian/CagedATP CaG+FuraR3.oib: [testng] [2024-10-29 01:17:12,026] [pool-1-thread-11] Initializing /data/aryeh/061010 plate 1/Image0002_06.oib: [testng] [2024-10-29 01:17:19,179] [pool-1-thread-11] Initializing /data/glen/singleseqline.oib: [testng] [2024-10-29 01:17:24,404] [pool-1-thread-11] Initializing /data/shane/Data Subset/EXX4-10G40%.oib: [testng] [2024-10-29 01:17:30,692] [pool-1-thread-11] Initializing /data/glen/QuitIJ/4202A2chtest.oib: [testng] [2024-10-29 01:17:33,744] [pool-1-thread-1] Initializing /data/glen/singleseqline.oif: [testng] [2024-10-29 01:17:38,464] [pool-1-thread-11] Initializing /data/glen/LUT issue/UVgreenredfarred.oif: [testng] [2024-10-29 01:18:37,977] [pool-1-thread-9] Initializing /data/aryeh/061010 plate 1/Image0002_05.oib: [testng] [2024-10-29 01:18:43,757] [pool-1-thread-1] Initializing /data/molly/11OCT11.OIF: [testng] [2024-10-29 01:19:12,997] [pool-1-thread-9] Initializing /data/brian/Kaede15.oib: [testng] [2024-10-29 01:19:19,101] [pool-1-thread-11] Initializing /data/tom/zseries-test.oib: [testng] [2024-10-29 01:19:22,547] [pool-1-thread-9] Initializing /data/glen/notsaturated.oif: [testng] [2024-10-29 01:19:33,295] [pool-1-thread-11] Initializing /data/lavinia/NM1-RibB-NeuroD-uninjected.oib: [testng] [2024-10-29 01:19:40,397] [pool-1-thread-11] Initializing /data/johannes/Image0010/Image0010.oif.files/Image0010_Thumb.bmp: [testng] [2024-10-29 01:19:42,640] [pool-1-thread-11] Initializing /data/aryeh/061010 plate 1/Image0002_08.oib: [testng] [2024-10-29 01:19:50,541] [pool-1-thread-11] Initializing /data/glen/LUT issue/Greenredfarred.oif: [testng] 02:30:18,137 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 02:30:18,137 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:30:18,138 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-10-29_02-30-18.log] [testng] 02:30:18,138 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1dea0730 - End of configuration. [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 7632, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 109 minutes 6 seconds Finished: SUCCESS