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Started by upstream project "BIOFORMATS-test-repo" build number 238 originally caused by: Started by upstream project "Trigger" build number 263 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@3 [BIOFORMATS-test-folder@3] $ /bin/bash -xe /tmp/jenkins5675622285702256249.sh + '[' zeiss-tiff = slidebook ']' ++ date +%u + '[' 2 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_37477_merge_ci -v /uod/idr/repos/curated/zeiss-tiff:/data -v /uod/idr-scratch/merge-ci/curated/zeiss-tiff:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] 1 warning test-automated: [testng] WARNING: An illegal reflective access operation has occurred [testng] WARNING: Illegal reflective access by org.kohsuke.file_leak_detector.Listener (file:/home/build/.m2/repository/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar) to field java.net.SocketImpl.socket [testng] WARNING: Please consider reporting this to the maintainers of org.kohsuke.file_leak_detector.Listener [testng] WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations [testng] WARNING: All illegal access operations will be denied in a future release [testng] File leak detector installed [testng] 02:57:16,506 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 02:57:16,508 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - No custom configurators were discovered as a service. [testng] 02:57:16,508 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 02:57:16,508 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 02:57:16,509 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 02:57:16,509 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 02:57:16,510 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 2 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 02:57:16,510 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 02:57:16,510 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 02:57:16,511 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 02:57:16,511 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 02:57:16,511 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 02:57:16,681 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 02:57:16,681 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 02:57:16,704 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 02:57:16,704 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 02:57:16,709 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 02:57:16,709 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 02:57:16,710 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 02:57:16,710 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 02:57:16,710 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@45099dd3 - End of configuration. [testng] 02:57:16,711 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@60099951 - Registering current configuration as safe fallback point [testng] 02:57:16,711 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 201 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-10-29 02:57:16,720] [main] java.version = 11.0.16 [testng] 02:57:16,723 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 02:57:16,723 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:57:16,765 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-10-29_02-57-16.log] [testng] 02:57:16,767 |-INFO in ch.qos.logback.core.sift.SiftProcessor@21be3395 - End of configuration. [testng] [2024-10-29 02:57:16,769] [main] testng.directory = /data [testng] [2024-10-29 02:57:16,769] [main] testng.configDirectory = /config [testng] [2024-10-29 02:57:16,779] [main] testng.multiplier = 1.0 [testng] [2024-10-29 02:57:16,780] [main] testng.in-memory = false [testng] [2024-10-29 02:57:16,780] [main] testng.allow-missing = false [testng] [2024-10-29 02:57:16,780] [main] user.language = en [testng] [2024-10-29 02:57:16,780] [main] user.country = ${user.country} [testng] [2024-10-29 02:57:16,780] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2024-10-29 02:58:14,011] [main] ---------------------------------------- [testng] [2024-10-29 02:58:14,011] [main] Total files: 15735 [testng] [2024-10-29 02:58:14,011] [main] Scan time: 57.23 s (3 ms/file) [testng] [2024-10-29 02:58:14,011] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 125 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-10-29 02:59:08,790] [pool-1-thread-1] Initializing /data/qa-21570/250618_J1_diff_D3-2-0002.tif: [testng] 02:59:08,791 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 02:59:08,791 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:59:08,793 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-10-29_02-59-08.log] [testng] 02:59:08,793 |-INFO in ch.qos.logback.core.sift.SiftProcessor@395fb033 - End of configuration. [testng] [2024-10-29 02:59:09,106] [pool-1-thread-12] Initializing /data/converted/jeffrey/750-30-03.tif: [testng] 02:59:09,106 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 02:59:09,106 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:59:09,107 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-10-29_02-59-09.log] [testng] 02:59:09,108 |-INFO in ch.qos.logback.core.sift.SiftProcessor@419a5f66 - End of configuration. [testng] [2024-10-29 02:59:09,418] [pool-1-thread-11] Initializing /data/converted/shalin/ibidiuslide1-timelapse3_mid2.tif: [testng] 02:59:09,419 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 02:59:09,419 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:59:09,419 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-10-29_02-59-09.log] [testng] 02:59:09,420 |-INFO in ch.qos.logback.core.sift.SiftProcessor@789cbae1 - End of configuration. [testng] [2024-10-29 02:59:09,806] [pool-1-thread-10] Initializing /data/converted/susan/BY4741NQ2.tif: [testng] 02:59:09,806 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 02:59:09,807 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:59:09,807 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-10-29_02-59-09.log] [testng] 02:59:09,808 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6f156d15 - End of configuration. [testng] [2024-10-29 02:59:10,040] [pool-1-thread-9] Initializing /data/converted/rolf/example_1-2010_11_25.tif: [testng] 02:59:10,040 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 02:59:10,040 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:59:10,041 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-10-29_02-59-10.log] [testng] 02:59:10,041 |-INFO in ch.qos.logback.core.sift.SiftProcessor@25384a9a - End of configuration. [testng] [2024-10-29 02:59:10,277] [pool-1-thread-8] Initializing /data/converted/dietmar/137.tif: [testng] 02:59:10,277 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 02:59:10,277 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:59:10,277 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-10-29_02-59-10.log] [testng] 02:59:10,278 |-INFO in ch.qos.logback.core.sift.SiftProcessor@31e7a4ff - End of configuration. [testng] [2024-10-29 02:59:10,726] [pool-1-thread-7] Initializing /data/converted/markus/Branchiostoma_6x12_MosaiX_Tiles_color.tif: [testng] 02:59:10,726 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 02:59:10,726 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:59:10,727 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-10-29_02-59-10.log] [testng] 02:59:10,727 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5d98d2e0 - End of configuration. [testng] [2024-10-29 02:59:11,157] [pool-1-thread-6] Initializing /data/converted/thomas/test_axiocam_3_1.tif: [testng] 02:59:11,157 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 02:59:11,157 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:59:11,158 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-10-29_02-59-11.log] [testng] 02:59:11,158 |-INFO in ch.qos.logback.core.sift.SiftProcessor@33cccbe9 - End of configuration. [testng] [2024-10-29 02:59:11,427] [pool-1-thread-5] Initializing /data/converted/markus/PC12_neuroblastoma_Fura2_exp#9.tif: [testng] 02:59:11,427 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 02:59:11,427 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:59:11,428 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-10-29_02-59-11.log] [testng] 02:59:11,428 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6d4de85c - End of configuration. [testng] [2024-10-29 02:59:12,333] [pool-1-thread-4] Initializing /data/converted/joseph/E-2009-0001a.tif: [testng] 02:59:12,333 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 02:59:12,333 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:59:12,334 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-10-29_02-59-12.log] [testng] 02:59:12,334 |-INFO in ch.qos.logback.core.sift.SiftProcessor@14aaa0f5 - End of configuration. [testng] [2024-10-29 02:59:12,770] [pool-1-thread-3] Initializing /data/converted/darren/section0002_w1.tif: [testng] 02:59:12,770 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 02:59:12,770 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:59:12,771 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-10-29_02-59-12.log] [testng] 02:59:12,771 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7bfcbc6b - End of configuration. [testng] [2024-10-29 02:59:13,115] [pool-1-thread-2] Initializing /data/converted/markus/MosaiX_irregular_Z-stack_with_autofocus.tif: [testng] 02:59:13,115 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 02:59:13,115 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:59:13,116 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-10-29_02-59-13.log] [testng] 02:59:13,116 |-INFO in ch.qos.logback.core.sift.SiftProcessor@31b89335 - End of configuration. [testng] [2024-10-29 02:59:24,094] [pool-1-thread-1] Initializing /data/converted/eirinn/pharm3-saline2-0147_11.tif: [testng] [2024-10-29 02:59:26,574] [pool-1-thread-10] Initializing /data/converted/dietmar/hmads-bac1-bac7-af488-rho-af647_pre-2006-03-30-0016.tif: [testng] [2024-10-29 02:59:27,262] [pool-1-thread-9] Initializing /data/converted/strand/2Colors1Plane.tif: [testng] [2024-10-29 02:59:28,016] [pool-1-thread-6] Initializing /data/converted/michel/d.tif: [testng] [2024-10-29 02:59:28,858] [pool-1-thread-12] Initializing /data/scott/Slide133-08.tif: [testng] [2024-10-29 02:59:29,584] [pool-1-thread-3] Initializing /data/converted/nicolas/image.tif: [testng] [2024-10-29 02:59:40,593] [pool-1-thread-3] Initializing /data/converted/markus/Confidence_ratio_image_PC12_neuroblastoma_Fura2_exp#9-2.tif: [testng] [2024-10-29 02:59:44,335] [pool-1-thread-12] Initializing /data/converted/markus/Material_color_image_HRc_microscanned_4x3K.tif: [testng] [2024-10-29 02:59:45,065] [pool-1-thread-6] Initializing /data/converted/converted/damian-compressed.tif: [testng] [2024-10-29 02:59:54,888] [pool-1-thread-9] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_9.tif: [testng] [2024-10-29 02:59:55,833] [pool-1-thread-6] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_1.tif: [testng] [2024-10-29 03:00:00,149] [pool-1-thread-12] Initializing /data/converted/sebastien/test.tif: [testng] [2024-10-29 03:00:47,962] [pool-1-thread-10] Initializing /data/scott/Slide133-04.tif: [testng] [2024-10-29 03:00:52,706] [pool-1-thread-11] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_12.tif: [testng] [2024-10-29 03:01:05,295] [pool-1-thread-10] Initializing /data/qa-21570/20150421_HepG2_yH2AX_DAPI_0.5h_5GyDOWN_1512_cell04_SIR_ALX.dv_comp.tif: [testng] [2024-10-29 03:01:10,885] [pool-1-thread-10] Initializing /data/converted/karsten/247096n3s3s9.tif: [testng] [2024-10-29 03:02:18,966] [pool-1-thread-10] Initializing /data/converted/joseph/BEST_EXAMPLE_LONGER_EXPOSURE.tif: [testng] [2024-10-29 03:02:42,364] [pool-1-thread-1] Initializing /data/converted/ville/MultiCh-RGB/pollen_rgb.tif: [testng] [2024-10-29 03:02:57,569] [pool-1-thread-8] Initializing /data/qa-21570/250618_J1_diff_D3-2-0004.tif: [testng] [2024-10-29 03:02:59,213] [pool-1-thread-1] Initializing /data/converted/rolf/example_2-2010_11_25.tif: [testng] [2024-10-29 03:03:00,885] [pool-1-thread-10] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_13.tif: [testng] [2024-10-29 03:03:09,507] [pool-1-thread-8] Initializing /data/converted/lior/live+cf5b.tif: [testng] [2024-10-29 03:03:12,990] [pool-1-thread-7] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_24.tif: [testng] [2024-10-29 03:03:14,111] [pool-1-thread-1] Initializing /data/converted/othmar/mozaic.tif: [testng] [2024-10-29 03:03:33,385] [pool-1-thread-6] Initializing /data/converted/kelsey/432x342BW.tif: [testng] [2024-10-29 03:03:37,612] [pool-1-thread-8] Initializing /data/converted/lior/live+cf2b.tif: [testng] [2024-10-29 03:03:49,094] [pool-1-thread-6] Initializing /data/converted/markus/HeLa-Reggie-GFP_ZT_fast-DCV-CI-measured-PSF.tif: [testng] [2024-10-29 03:03:56,743] [pool-1-thread-9] Initializing /data/converted/converted/wtzer_series76_z003_ch00.tif: [testng] [2024-10-29 03:04:04,675] [pool-1-thread-8] Initializing /data/converted/dan/zstack_convalaria.tif: [testng] [2024-10-29 03:04:05,487] [pool-1-thread-4] Initializing /data/othmar/mozaic.tif: [testng] [2024-10-29 03:04:08,086] [pool-1-thread-9] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_23.tif: [testng] [2024-10-29 03:04:11,693] [pool-1-thread-2] Initializing /data/converted/kelsey/650x514BW.tif: [testng] [2024-10-29 03:04:22,058] [pool-1-thread-8] Initializing /data/converted/monica/Monica_elegans_movie.tif: [testng] [2024-10-29 03:04:24,639] [pool-1-thread-2] Initializing /data/converted/markus/Mouse-newborn-panorama_JPEG_5percent_compressed.tif: [testng] [2024-10-29 03:04:25,317] [pool-1-thread-12] Initializing /data/converted/cecilia/day 1 naked nb positive 1-2007-0055.tif: [testng] [2024-10-29 03:04:42,510] [pool-1-thread-12] Initializing /data/converted/markus/Mouse-newborn-panorama.tif: [testng] [2024-10-29 03:04:52,484] [pool-1-thread-2] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_14.tif: [testng] [2024-10-29 03:04:55,534] [pool-1-thread-11] Initializing /data/converted/stephan/notok1.tif: [testng] [2024-10-29 03:05:08,725] [pool-1-thread-12] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_21.tif: [testng] [2024-10-29 03:05:20,256] [pool-1-thread-1] Initializing /data/converted/converted/mri-stack.tif: [testng] [2024-10-29 03:05:30,737] [pool-1-thread-1] Initializing /data/converted/sebastien/F1.tif: [testng] [2024-10-29 03:05:50,547] [pool-1-thread-11] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_2.tif: [testng] [2024-10-29 03:06:00,379] [pool-1-thread-4] Initializing /data/converted/markus/HighSpeedParas.tif: [testng] [2024-10-29 03:06:55,443] [pool-1-thread-10] Initializing /data/converted/michel/e.tif: [testng] [2024-10-29 03:07:53,424] [pool-1-thread-1] Initializing /data/converted/vladan/vladan.tif: [testng] [2024-10-29 03:08:04,585] [pool-1-thread-10] Initializing /data/converted/michel/b.tif: [testng] [2024-10-29 03:08:06,507] [pool-1-thread-7] Initializing /data/converted/dietmar/hmads-bac1-bac7-af488-rho-af647_pre-2006-03-30-ten.tif: [testng] [2024-10-29 03:08:49,827] [pool-1-thread-10] Initializing /data/converted/eirinn/demo-tile.tif: [testng] [2024-10-29 03:09:33,780] [pool-1-thread-10] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_3.tif: [testng] [2024-10-29 03:09:55,506] [pool-1-thread-9] Initializing /data/converted/karsten/Bild1.tif: [testng] [2024-10-29 03:10:27,766] [pool-1-thread-9] Initializing /data/converted/converted/deconvolve6_pseudo_tl000_zs000.tif: [testng] [2024-10-29 03:10:48,776] [pool-1-thread-9] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_22.tif: [testng] [2024-10-29 03:11:01,828] [pool-1-thread-2] Initializing /data/converted/jan/SampleStack_Mosaic4x5_comb.tif: [testng] [2024-10-29 03:11:27,477] [pool-1-thread-12] Initializing /data/converted/eirinn/11_10_2009-01-lcstim-15-10-09_position(1).tif: [testng] [2024-10-29 03:11:52,281] [pool-1-thread-3] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_18.tif: [testng] [2024-10-29 03:12:09,626] [pool-1-thread-7] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_25.tif: [testng] [2024-10-29 03:12:16,476] [pool-1-thread-11] Initializing /data/converted/dietmar/138.tif: [testng] [2024-10-29 03:13:31,661] [pool-1-thread-1] Initializing /data/converted/rachel/40K 30s A1.tif: [testng] [2024-10-29 03:14:00,637] [pool-1-thread-1] Initializing /data/scott/Slide133-11.tif: [testng] [2024-10-29 03:14:26,329] [pool-1-thread-1] Initializing /data/converted/darren/section0001_w1.tif: [testng] [2024-10-29 03:14:44,994] [pool-1-thread-12] Initializing /data/converted/jonas/10_0907_multidrug-0001_AB01_08.tif: [testng] [2024-10-29 03:14:52,819] [pool-1-thread-1] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast-widefield.tif: [testng] [2024-10-29 03:15:55,706] [pool-1-thread-10] Initializing /data/converted/markus/Brain_high_dynamic_range_imaging_Z-stack.tif: [testng] [2024-10-29 03:17:17,096] [pool-1-thread-9] Initializing /data/converted/michel/a.tif: [testng] [2024-10-29 03:17:35,205] [pool-1-thread-9] Initializing /data/converted/othmar/z-stack.tif: [testng] [2024-10-29 03:18:13,012] [pool-1-thread-11] Initializing /data/converted/dietmar/dapi-texasred-0015.tif: [testng] [2024-10-29 03:18:26,719] [pool-1-thread-3] Initializing /data/samples/mri-stack/mri-stack.tif: [testng] [2024-10-29 03:18:40,693] [pool-1-thread-10] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_11.tif: [testng] [2024-10-29 03:18:44,853] [pool-1-thread-3] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_5.tif: [testng] [2024-10-29 03:18:49,218] [pool-1-thread-7] Initializing /data/converted/eirinn/12_2_2009-16-hes5-brdu-proper_position(52).tif: [testng] [2024-10-29 03:22:10,980] [pool-1-thread-7] Initializing /data/converted/converted/damian.tif: [testng] [2024-10-29 03:22:29,793] [pool-1-thread-7] Initializing /data/converted/joseph/E-2009-0004.tif: [testng] [2024-10-29 03:23:06,958] [pool-1-thread-11] Initializing /data/converted/markus/Hypocampus_Tiles_with_stiching.tif: [testng] [2024-10-29 03:23:37,395] [pool-1-thread-1] Initializing /data/converted/converted/2chz.tif: [testng] [2024-10-29 03:24:22,507] [pool-1-thread-5] Initializing /data/converted/converted/wtzer_series76_z003_ch00-with-rois.tif: [testng] [2024-10-29 03:24:45,665] [pool-1-thread-5] Initializing /data/converted/eirinn/12_16_2009-01-tara-hd-triple-5to15_position(1)5.tif: [testng] [2024-10-29 03:24:55,789] [pool-1-thread-6] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_4.tif: [testng] [2024-10-29 03:25:18,387] [pool-1-thread-3] Initializing /data/converted/miso/Aufnahme-184058-0002.tif: [testng] [2024-10-29 03:25:30,519] [pool-1-thread-10] Initializing /data/qa-21570/250618_J1_diff_D3-2-0003.tif: [testng] [2024-10-29 03:25:42,400] [pool-1-thread-11] Initializing /data/converted/ville/MultiCh-RGB/pollen_bw.tif: [testng] [2024-10-29 03:25:44,057] [pool-1-thread-3] Initializing /data/converted/eirinn/5_6_2009-dj9-03_a01_01.tif: [testng] [2024-10-29 03:25:54,668] [pool-1-thread-10] Initializing /data/converted/dan/adultnr1.tif: [testng] [2024-10-29 03:26:17,552] [pool-1-thread-11] Initializing /data/converted/james/Sylvain_run3_1Gy_Live7-2008-0019.tif: [testng] [2024-10-29 03:26:30,330] [pool-1-thread-3] Initializing /data/converted/dietmar/hmads-24h-bac1-7-af647-af488-rho-1day-hyb-csk-2007-06-29-0008_position(113).tif: [testng] [2024-10-29 03:26:37,785] [pool-1-thread-1] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_8.tif: [testng] [2024-10-29 03:27:01,133] [pool-1-thread-10] Initializing /data/converted/converted/2chzt.tif: [testng] [2024-10-29 03:28:21,406] [pool-1-thread-11] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_10.tif: [testng] [2024-10-29 03:29:47,530] [pool-1-thread-12] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_15.tif: [testng] [2024-10-29 03:30:26,343] [pool-1-thread-5] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_19.tif: [testng] [2024-10-29 03:31:40,948] [pool-1-thread-7] Initializing /data/converted/markus/Long_TL_CElegans.tif: [testng] [2024-10-29 03:31:46,006] [pool-1-thread-9] Initializing /data/converted/dietmar/hmads-bac1-bac7-af488-rho-af647_pre-2006-03-30-six.tif: [testng] [2024-10-29 03:32:08,058] [pool-1-thread-6] Initializing /data/converted/michel/c.tif: [testng] [2024-10-29 03:32:44,898] [pool-1-thread-6] Initializing /data/converted/rachel/40K 30s A2.tif: [testng] [2024-10-29 03:33:19,644] [pool-1-thread-6] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_6.tif: [testng] [2024-10-29 03:33:42,099] [pool-1-thread-2] Initializing /data/converted/joseph/Alike_best_example_but_WORKS_FINE_maybe_cause_shorter_expose.tif: [testng] [2024-10-29 03:34:03,260] [pool-1-thread-3] Initializing /data/converted/markus/Smart_Experiment_4ch-T-time-stitched.tif: [testng] [2024-10-29 03:34:18,233] [pool-1-thread-1] Initializing /data/converted/karsten/Bild2.tif: [testng] [2024-10-29 03:34:51,735] [pool-1-thread-1] Initializing /data/scott/Slide133-01.tif: [testng] [2024-10-29 03:35:20,961] [pool-1-thread-1] Initializing /data/converted/joseph/E-2009_0022.tif: [testng] [2024-10-29 03:35:26,360] [pool-1-thread-11] Initializing /data/dorai/F_ZImage10_(X10)_C.tif: [testng] [2024-10-29 03:35:31,203] [pool-1-thread-2] Initializing /data/converted/markus/30channels_exposure-series.tif: [testng] [2024-10-29 03:35:53,825] [pool-1-thread-11] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast-sectioned.tif: [testng] [2024-10-29 03:35:55,843] [pool-1-thread-9] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast.tif: [testng] [2024-10-29 03:37:16,077] [pool-1-thread-12] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_16.tif: [testng] [2024-10-29 03:37:32,977] [pool-1-thread-2] Initializing /data/converted/markus/Mouse-newborn-panorama_lossless_compressed.tif: [testng] [2024-10-29 03:38:12,641] [pool-1-thread-2] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_17.tif: [testng] [2024-10-29 03:38:21,675] [pool-1-thread-5] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast-sidebyside.tif: [testng] [2024-10-29 03:39:58,069] [pool-1-thread-6] Initializing /data/converted/markus/6ch-Z-stack_deconvolved.tif: [testng] [2024-10-29 03:44:39,262] [pool-1-thread-1] Initializing /data/converted/david/snap-181518-0001.tif: [testng] [2024-10-29 03:44:42,572] [pool-1-thread-12] Initializing /data/converted/kelsey/1300x1030BW.tif: [testng] [2024-10-29 03:45:03,401] [pool-1-thread-12] Initializing /data/converted/markus/PhaseGFP-MosaiX-Timelapse_Tiles.tif: [testng] [2024-10-29 03:45:05,678] [pool-1-thread-1] Initializing /data/converted/jonas/10_0907_multidrug-0001_AB01_03.tif: [testng] [2024-10-29 03:45:27,179] [pool-1-thread-9] Initializing /data/converted/stephan/notok2.tif: [testng] 04:19:40,829 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 04:19:40,829 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:19:40,830 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-10-29_04-19-40.log] [testng] 04:19:40,831 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2d0ea3a9 - End of configuration. [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 6625, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 82 minutes 30 seconds Finished: SUCCESS