Started by upstream project "BIOFORMATS-test-repo" build number 239
originally caused by:
Started by upstream project "Trigger" build number 264
originally caused by:
Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@5
[BIOFORMATS-test-folder@5] $ /bin/bash -xe /tmp/jenkins2527780826297663468.sh
+ '[' sxm = slidebook ']'
++ date +%u
+ '[' 3 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_37601_merge_ci -v /uod/idr/repos/curated/sxm:/data -v /uod/idr-scratch/merge-ci/curated/sxm:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
[echo] isSnapshot = true
init-title:
[echo] ----------=========== bio-formats-testing-framework ===========----------
init-timestamp:
init:
copy-resources:
compile:
[resolver:resolve] Resolving artifacts
compile-tests:
[resolver:resolve] Resolving artifacts
[javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
[javac] warning: [options] bootstrap class path not set in conjunction with -source 8
[javac] 1 warning
test-automated:
[testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket
[testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket
[testng] File leak detector installed
[testng] 01:51:37,193 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
[testng] 01:51:37,194 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - No custom configurators were discovered as a service.
[testng] 01:51:37,194 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 01:51:37,195 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 01:51:37,196 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
[testng] 01:51:37,196 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
[testng] 01:51:37,196 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
[testng] 01:51:37,196 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 01:51:37,197 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 01:51:37,197 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
[testng] 01:51:37,197 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
[testng] 01:51:37,198 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
[testng] 01:51:37,364 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
[testng] 01:51:37,364 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
[testng] 01:51:37,387 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
[testng] 01:51:37,387 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
[testng] 01:51:37,392 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
[testng] 01:51:37,392 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
[testng] 01:51:37,392 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
[testng] 01:51:37,393 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
[testng] 01:51:37,393 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@2e3967ea - End of configuration.
[testng] 01:51:37,394 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@2e6a8155 - Registering current configuration as safe fallback point
[testng] 01:51:37,394 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 197 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
[testng] [2024-10-30 01:51:37,403] [main] java.version = 17.0.2
[testng] 01:51:37,406 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
[testng] 01:51:37,406 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:51:37,447 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-10-30_01-51-37.log]
[testng] 01:51:37,448 |-INFO in ch.qos.logback.core.sift.SiftProcessor@798162bc - End of configuration.
[testng] [2024-10-30 01:51:37,450] [main] testng.directory = /data
[testng] [2024-10-30 01:51:37,451] [main] testng.configDirectory = /config
[testng] [2024-10-30 01:51:37,459] [main] testng.multiplier = 1.0
[testng] [2024-10-30 01:51:37,460] [main] testng.in-memory = false
[testng] [2024-10-30 01:51:37,460] [main] testng.allow-missing = false
[testng] [2024-10-30 01:51:37,460] [main] user.language = en
[testng] [2024-10-30 01:51:37,460] [main] user.country = ${user.country}
[testng] [2024-10-30 01:51:37,460] [main] Maximum heap size = 15360 MB
[testng] Scanning for files...
[testng] [2024-10-30 01:55:49,125] [main] ----------------------------------------
[testng] [2024-10-30 01:55:49,125] [main] Total files: 268
[testng] [2024-10-30 01:55:49,125] [main] Scan time: 251.665 s (939 ms/file)
[testng] [2024-10-30 01:55:49,125] [main] ----------------------------------------
[testng] Building list of tests...
[testng] Ready to test 160 files
[testng] [TestNG] Running:
[testng] Bio-Formats software test suite
[testng]
[testng] [2024-10-30 02:01:07,357] [pool-1-thread-1] Initializing /data/steve/JEOL/WinSem (Sue)/SIC2.IMG:
[testng] 02:01:07,357 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
[testng] 02:01:07,358 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:01:07,359 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-10-30_02-01-07.log]
[testng] 02:01:07,359 |-INFO in ch.qos.logback.core.sift.SiftProcessor@31d0f685 - End of configuration.
[testng] [2024-10-30 02:01:08,405] [pool-1-thread-12] Initializing /data/steve/Philips (Markus G)/302.IMG:
[testng] 02:01:08,406 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
[testng] 02:01:08,406 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:01:08,406 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-10-30_02-01-08.log]
[testng] 02:01:08,407 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7b608c42 - End of configuration.
[testng] [2024-10-30 02:01:08,979] [pool-1-thread-11] Initializing /data/steve/Molecular Imaging/Mol Imag v4.18 (Reinat)/TwoDots.STP:
[testng] 02:01:08,979 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
[testng] 02:01:08,979 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:01:08,980 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-10-30_02-01-08.log]
[testng] 02:01:08,980 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5cb27aec - End of configuration.
[testng] [2024-10-30 02:01:09,527] [pool-1-thread-10] Initializing /data/steve/TopoMetrix/Topo STM (Liam McD)/GRID1.TFR:
[testng] 02:01:09,527 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
[testng] 02:01:09,527 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:01:09,528 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-10-30_02-01-09.log]
[testng] 02:01:09,528 |-INFO in ch.qos.logback.core.sift.SiftProcessor@46e8bae1 - End of configuration.
[testng] [2024-10-30 02:01:10,273] [pool-1-thread-9] Initializing /data/steve/Quesant Instr/Quesant v1.2 (Marc F)/stm1.afm:
[testng] 02:01:10,273 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
[testng] 02:01:10,273 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:01:10,274 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-10-30_02-01-10.log]
[testng] 02:01:10,274 |-INFO in ch.qos.logback.core.sift.SiftProcessor@552eaeb - End of configuration.
[testng] [2024-10-30 02:01:10,910] [pool-1-thread-8] Initializing /data/steve/TopoMetrix/Topo MFM (SC)/NDR2-1.2FL:
[testng] 02:01:10,910 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
[testng] 02:01:10,910 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:01:10,911 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-10-30_02-01-10.log]
[testng] 02:01:10,911 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6423d2ec - End of configuration.
[testng] [2024-10-30 02:01:11,569] [pool-1-thread-7] Initializing /data/steve/TIFF/HAFF SEM:
[testng] 02:01:11,569 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
[testng] 02:01:11,569 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:01:11,570 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-10-30_02-01-11.log]
[testng] 02:01:11,570 |-INFO in ch.qos.logback.core.sift.SiftProcessor@61a01686 - End of configuration.
[testng] [2024-10-30 02:01:13,711] [pool-1-thread-6] Initializing /data/steve/Philips (Markus G)/135-32.IMG:
[testng] 02:01:13,712 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
[testng] 02:01:13,712 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:01:13,712 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-10-30_02-01-13.log]
[testng] 02:01:13,713 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1d384eb3 - End of configuration.
[testng] [2024-10-30 02:01:14,190] [pool-1-thread-5] Initializing /data/steve/Quesant Instr/Quesant v1.2 (Marc F)/stm2.afm:
[testng] 02:01:14,190 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
[testng] 02:01:14,190 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:01:14,191 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-10-30_02-01-14.log]
[testng] 02:01:14,191 |-INFO in ch.qos.logback.core.sift.SiftProcessor@76c950a8 - End of configuration.
[testng] [2024-10-30 02:01:14,715] [pool-1-thread-4] Initializing /data/steve/FITS/M51.fits:
[testng] 02:01:14,715 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
[testng] 02:01:14,715 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:01:14,716 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-10-30_02-01-14.log]
[testng] 02:01:14,716 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2bf042b4 - End of configuration.
[testng] [2024-10-30 02:01:14,896] [pool-1-thread-3] Initializing /data/steve/JEOL/SPM (Hiroyuki Isobe)/JEOL3.tif:
[testng] 02:01:14,896 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
[testng] 02:01:14,896 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:01:14,897 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-10-30_02-01-14.log]
[testng] 02:01:14,897 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4f5a20f2 - End of configuration.
[testng] [2024-10-30 02:01:16,882] [pool-1-thread-2] Initializing /data/steve/TIFF/Macrophage cell images/T24-24 1600 36_48-bit.tif:
[testng] 02:01:16,882 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
[testng] 02:01:16,882 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:01:16,883 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-10-30_02-01-16.log]
[testng] 02:01:16,883 |-INFO in ch.qos.logback.core.sift.SiftProcessor@12e33669 - End of configuration.
[testng] [2024-10-30 02:01:22,111] [pool-1-thread-4] Initializing /data/steve/Zeiss LSM/Zeiss LSM (John S)/Zeiss LSM 2 samples:pixel/coltubfitc1proj.lsm:
[testng] [2024-10-30 02:01:24,791] [pool-1-thread-8] Initializing /data/steve/RHK Tech/RHK (Mark Flowers)/Demo07.sm2:
[testng] [2024-10-30 02:01:25,461] [pool-1-thread-10] Initializing /data/steve/Targa/Test.TGA:
[testng] [2024-10-30 02:01:26,072] [pool-1-thread-5] Initializing /data/steve/JEOL/SPM (Hiroyuki Isobe)/HOPG.tif:
[testng] [2024-10-30 02:01:28,398] [pool-1-thread-9] Initializing /data/steve/VG SAM (Karen)/PEAK.DTI:
[testng] [2024-10-30 02:01:29,057] [pool-1-thread-6] Initializing /data/steve/Burleigh/Burleigh v2/Graphite:
[testng] [2024-10-30 02:01:31,255] [pool-1-thread-12] Initializing /data/steve/Zeiss LSM/Zeiss LSM (Ewald B)/NIALDIAN.TIF:
[testng] [2024-10-30 02:01:33,430] [pool-1-thread-11] Initializing /data/steve/Gatan/Gatan Mac (Guy Mayor)/Digital Micrograph 3.4:
[testng] [2024-10-30 02:01:37,042] [pool-1-thread-11] Initializing /data/steve/JEOL/WinSem (Sue)/Shuttle tile ceramic/SHUTTLEE.IMG:
[testng] [2024-10-30 02:01:38,094] [pool-1-thread-4] Initializing /data/steve/Seiko Instr (Hwansoo)/05808001-2.xqd:
[testng] [2024-10-30 02:01:38,935] [pool-1-thread-1] Initializing /data/steve/Gatan/Gatan Mac (Guy Mayor)/Digital Micrograph 2.5:
[testng] [2024-10-30 02:01:39,423] [pool-1-thread-9] Initializing /data/steve/TIFF/CONCRETE TIFF:
[testng] [2024-10-30 02:01:41,646] [pool-1-thread-10] Initializing /data/steve/Leica TCS (Keith B)/25_5BJ.SXM:
[testng] [2024-10-30 02:01:43,313] [pool-1-thread-8] Initializing /data/steve/TopoMetrix/Topo MFM (SC)/NDPOL-01.TFR:
[testng] [2024-10-30 02:01:44,009] [pool-1-thread-3] Initializing /data/steve/Zeiss LSM/Zeiss LSM (John S)/Zeiss LSM 1 sample:pixel/ug6stack3.lsm:
[testng] [2024-10-30 02:01:45,143] [pool-1-thread-7] Initializing /data/steve/RHK Tech/RHK (Bob Baker)/Examp_05.SM2:
[testng] [2024-10-30 02:01:46,548] [pool-1-thread-2] Initializing /data/steve/Philips (Markus G)/135-31.IMG:
[testng] [2024-10-30 02:01:48,524] [pool-1-thread-4] Initializing /data/steve/JPK Instr (Christian L)/Anti-reflex-coating.jpk:
[testng] [2024-10-30 02:01:50,497] [pool-1-thread-1] Initializing /data/steve/TopoMetrix/Topo SFM (SC)/FFT test:
[testng] [2024-10-30 02:01:52,927] [pool-1-thread-6] Initializing /data/steve/Gatan/TEM (Larry Thomas)/TEM 10 KX:
[testng] [2024-10-30 02:01:53,884] [pool-1-thread-8] Initializing /data/steve/Misc SXM test images/BMP images/m20_p.bmp:
[testng] [2024-10-30 02:01:54,104] [pool-1-thread-7] Initializing /data/steve/SM-Camera/Orhan + IPES rig:
[testng] [2024-10-30 02:01:56,262] [pool-1-thread-12] Initializing /data/steve/Zeiss LSM/Zeiss LSM (John S)/Zeiss LSM 2 samples:pixel/coltubfitc1.lsm:
[testng] [2024-10-30 02:01:57,331] [pool-1-thread-11] Initializing /data/steve/JEOL/WinSem (Sue)/CONCRETE.IMG:
[testng] [2024-10-30 02:01:58,194] [pool-1-thread-5] Initializing /data/steve/Gatan/Gatan (Sue D)/SEM 500X (Larry):
[testng] [2024-10-30 02:01:58,563] [pool-1-thread-3] Initializing /data/steve/JEOL/WinSem (Sue)/Shuttle tile ceramic/SHUTTLED.IMG:
[testng] [2024-10-30 02:01:59,467] [pool-1-thread-2] Initializing /data/steve/VG SAM (Karen)/BGND.DTI:
[testng] [2024-10-30 02:02:00,944] [pool-1-thread-8] Initializing /data/steve/Zeiss LSM/Zeiss LSM (Ewald B)/FGD006.TIF:
[testng] [2024-10-30 02:02:04,306] [pool-1-thread-6] Initializing /data/steve/Quesant Instr/Quesant v1.2 (Marc F)/afm3.afm:
[testng] [2024-10-30 02:02:05,125] [pool-1-thread-4] Initializing /data/steve/RHK Tech/RHK IV (Koji N)/02042603.sm2:
[testng] [2024-10-30 02:02:07,204] [pool-1-thread-5] Initializing /data/steve/JEOL/WinSem (Sue)/BALLS.IMG:
[testng] [2024-10-30 02:02:08,536] [pool-1-thread-9] Initializing /data/steve/Quesant Instr/Quesant v1.2 (Marc F)/afm1.afm:
[testng] [2024-10-30 02:02:09,370] [pool-1-thread-2] Initializing /data/steve/SBIG/M82 H 100s Tr=10s:
[testng] [2024-10-30 02:02:11,663] [pool-1-thread-10] Initializing /data/steve/Quesant Instr/Quesant v2.0 (Brad Taft)/03031020.afm:
[testng] [2024-10-30 02:02:12,395] [pool-1-thread-12] Initializing /data/steve/Burleigh/Burleigh v2/Burleigh v2 (Phil W)/0_h4_4.img:
[testng] [2024-10-30 02:02:15,050] [pool-1-thread-1] Initializing /data/steve/RHK Tech/RHK (Oliver Leifeld)/SM02_08.SM2:
[testng] [2024-10-30 02:02:16,447] [pool-1-thread-7] Initializing /data/steve/Gatan/Gatan (Sue D)/WOODLOUSE:
[testng] [2024-10-30 02:02:16,931] [pool-1-thread-6] Initializing /data/steve/Seiko Instr (Hwansoo)/05808002.xqf:
[testng] [2024-10-30 02:02:17,632] [pool-1-thread-11] Initializing /data/steve/TIFF/Hough test TIFF:
[testng] [2024-10-30 02:02:19,864] [pool-1-thread-3] Initializing /data/steve/Burleigh/Burleigh v1/Burleigh.IMG:
[testng] [2024-10-30 02:02:22,411] [pool-1-thread-4] Initializing /data/steve/Misc SXM test images/Fake STM/Fake STM (8 rpts) TIFF:
[testng] [2024-10-30 02:02:24,660] [pool-1-thread-8] Initializing /data/steve/Zeiss LSM/Zeiss LSM (John S)/Zeiss LSM 1 sample:pixel/ug6proj3.lsm:
[testng] [2024-10-30 02:02:25,695] [pool-1-thread-9] Initializing /data/steve/Gatan/Gatan (Patrick Burton)/PDB_DARK_25k.dm3:
[testng] [2024-10-30 02:02:26,046] [pool-1-thread-10] Initializing /data/steve/RHK Tech/RHK (Bob Baker)/SCREEN1.PICT:
[testng] [2024-10-30 02:02:28,683] [pool-1-thread-7] Initializing /data/steve/FITS/M104.fits:
[testng] [2024-10-30 02:02:29,526] [pool-1-thread-1] Initializing /data/steve/FITS/Meade DSI/M31bB1.fts:
[testng] [2024-10-30 02:02:30,106] [pool-1-thread-6] Initializing /data/steve/JEOL/SPM (Hiroyuki Isobe)/990304j.tif:
[testng] [2024-10-30 02:02:32,497] [pool-1-thread-5] Initializing /data/steve/Misc SXM test images/Stacks/DoF test stack (Ahnelt):
[testng] [2024-10-30 02:02:35,602] [pool-1-thread-9] Initializing /data/steve/Misc SXM test images/Stacks/Fred's stack:
[testng] [2024-10-30 02:02:38,017] [pool-1-thread-7] Initializing /data/steve/Gatan/Gatan TIFF/THE FLY 4 TIFF:
[testng] [2024-10-30 02:02:40,354] [pool-1-thread-1] Initializing /data/steve/Bio-Rad (Nico Lindegger)/b.PIC:
[testng] [2024-10-30 02:02:41,362] [pool-1-thread-2] Initializing /data/steve/TIFF/Macrophage cell images/T08-08 1600 24-bit.tif:
[testng] [2024-10-30 02:02:43,742] [pool-1-thread-12] Initializing /data/steve/Oxford Instr (Yoshimasa)/98042103.TIF:
[testng] [2024-10-30 02:02:45,670] [pool-1-thread-10] Initializing /data/steve/TIFF/ta123 stack TIFF:
[testng] [2024-10-30 02:02:47,951] [pool-1-thread-8] Initializing /data/steve/JEOL/SEM (Steve Foulds)/IPS2000.DAT:
[testng] [2024-10-30 02:02:49,195] [pool-1-thread-4] Initializing /data/steve/RHK Tech/RHK (Bob Baker)/Examp_03.SM2:
[testng] [2024-10-30 02:02:50,023] [pool-1-thread-3] Initializing /data/steve/Oxford Instr (Yoshimasa)/80619a.top:
[testng] [2024-10-30 02:02:50,626] [pool-1-thread-11] Initializing /data/steve/Gatan/Gatan PC (Eric Leroy)/Oxygen map 1.dm3:
[testng] [2024-10-30 02:02:54,100] [pool-1-thread-11] Initializing /data/steve/Philips (Markus G)/135-33.IMG:
[testng] [2024-10-30 02:02:55,502] [pool-1-thread-1] Initializing /data/steve/Misc SXM test images/Chromosome images/HKGmaizeMitose5.pict:
[testng] [2024-10-30 02:02:56,151] [pool-1-thread-8] Initializing /data/steve/TIFF/ta269 TIFF:
[testng] [2024-10-30 02:02:58,164] [pool-1-thread-3] Initializing /data/steve/Molecular Imaging/Mol Imag v4.18 (Reinat)/npc-liq-sharO_003.STP:
[testng] [2024-10-30 02:02:58,809] [pool-1-thread-6] Initializing /data/steve/TIFF/Macrophage cell images/D1-A-1 1392 36-bit.tif:
[testng] [2024-10-30 02:02:59,683] [pool-1-thread-4] Initializing /data/steve/Gatan/Gatan PC (Eric Leroy)/Iron map 10.dm3:
[testng] [2024-10-30 02:02:59,993] [pool-1-thread-5] Initializing /data/steve/Gatan/Gatan (Patrick Burton)/PDB_DARK_25k.dm2:
[testng] [2024-10-30 02:03:00,402] [pool-1-thread-9] Initializing /data/steve/JEOL/SPM (Masashi N)/FFM204.TIF:
[testng] [2024-10-30 02:03:02,590] [pool-1-thread-12] Initializing /data/steve/TopoMetrix/Topo STM v5 (Ewald B)/c80-50.ffr:
[testng] [2024-10-30 02:03:04,020] [pool-1-thread-10] Initializing /data/steve/Hamamatsu (Keith B)/HIS-12bit-1a.HIS:
[testng] [2024-10-30 02:03:04,681] [pool-1-thread-7] Initializing /data/steve/TopoMetrix/Topo STM v5 (Ewald B)/c80-50ffr.tif:
[testng] [2024-10-30 02:03:07,256] [pool-1-thread-1] Initializing /data/steve/Seiko Instr (Hwansoo)/05808001-3.xqd:
[testng] [2024-10-30 02:03:07,969] [pool-1-thread-4] Initializing /data/steve/Philips (Markus G)/302.TIF:
[testng] [2024-10-30 02:03:09,893] [pool-1-thread-2] Initializing /data/steve/Bio-Rad (Nico Lindegger)/a.PIC:
[testng] [2024-10-30 02:03:10,878] [pool-1-thread-11] Initializing /data/steve/Misc SXM test images/Hough transform/Dale's bubbles:
[testng] [2024-10-30 02:03:12,963] [pool-1-thread-3] Initializing /data/steve/Misc SXM test images/Chromosome images/Chironomus2.pict:
[testng] [2024-10-30 02:03:14,258] [pool-1-thread-5] Initializing /data/steve/JPK Instr (Christian L)/Titanium-implant.jpk:
[testng] [2024-10-30 02:03:15,766] [pool-1-thread-12] Initializing /data/steve/Misc SXM test images/Hough transform/Nathalie's test:
[testng] [2024-10-30 02:03:17,874] [pool-1-thread-8] Initializing /data/steve/UBM (Rosset)/SG2.PR3:
[testng] [2024-10-30 02:03:18,552] [pool-1-thread-1] Initializing /data/steve/Burleigh/Burleigh v2/Burleigh v2 (Phil W)/1_2h2_3.img:
[testng] [2024-10-30 02:03:20,787] [pool-1-thread-10] Initializing /data/steve/Unisoku (Takashi)/Sample.HDR:
[testng] [2024-10-30 02:03:22,018] [pool-1-thread-9] Initializing /data/steve/Gatan/Gatan (Sue D)/Honey Bee:
[testng] [2024-10-30 02:03:22,540] [pool-1-thread-6] Initializing /data/steve/Gatan/Gatan (Sue D)/THE FLY A:
[testng] [2024-10-30 02:03:23,015] [pool-1-thread-3] Initializing /data/steve/Quesant Instr/Quesant v2.0 (Brad Taft)/03031004.afm:
[testng] [2024-10-30 02:03:24,906] [pool-1-thread-2] Initializing /data/steve/TopoMetrix/Topo SFM (SC)/PA2.TFR:
[testng] [2024-10-30 02:03:25,971] [pool-1-thread-8] Initializing /data/steve/JEOL/SPM (Masashi N)/AFM204.TIF:
[testng] [2024-10-30 02:03:28,003] [pool-1-thread-5] Initializing /data/steve/TopoMetrix/Topo SFM (SC)/IM_P1.TFR:
[testng] [2024-10-30 02:03:28,610] [pool-1-thread-4] Initializing /data/steve/Gatan/Gatan (Sue D)/THE FLY:
[testng] [2024-10-30 02:03:29,135] [pool-1-thread-7] Initializing /data/steve/Hamamatsu (Keith B)/HIS-12bit-3.HIS:
[testng] [2024-10-30 02:03:29,995] [pool-1-thread-9] Initializing /data/steve/Gatan/Gatan TIFF/Si CHIP TIFF:
[testng] [2024-10-30 02:03:32,080] [pool-1-thread-11] Initializing /data/steve/Zeiss LSM/Zeiss LSM - 2 samp:pix (??)/16bcutagain.lsm:
[testng] [2024-10-30 02:03:33,156] [pool-1-thread-12] Initializing /data/steve/Gatan/Gatan TIFF/BALL TIFF:
[testng] [2024-10-30 02:03:35,325] [pool-1-thread-6] Initializing /data/steve/RHK Tech/RHK (Bob Baker)/Examp_02.SM2:
[testng] [2024-10-30 02:03:36,020] [pool-1-thread-3] Initializing /data/steve/FITS/Meade DSI/M31bG1.fts:
[testng] [2024-10-30 02:03:36,405] [pool-1-thread-2] Initializing /data/steve/Oxford Instr (Yoshimasa)/98042103.top:
[testng] [2024-10-30 02:03:37,000] [pool-1-thread-1] Initializing /data/steve/Quesant Instr/Quesant v2.0 (Hal E)/2-18-05A.afm:
[testng] [2024-10-30 02:03:38,772] [pool-1-thread-4] Initializing /data/steve/Quesant Instr/Quesant v2.0 (Hal E)/03-17-05A.afm:
[testng] [2024-10-30 02:03:39,636] [pool-1-thread-5] Initializing /data/steve/RHK Tech/RHK (Bob Baker)/Examp_01.SM2:
[testng] [2024-10-30 02:03:40,369] [pool-1-thread-7] Initializing /data/steve/RHK Tech/RHK (Mark Flowers)/Silicon.sm2:
[testng] [2024-10-30 02:03:41,111] [pool-1-thread-11] Initializing /data/steve/FITS/Meade DSI/M31bR1.fts:
[testng] [2024-10-30 02:03:41,333] [pool-1-thread-3] Initializing /data/steve/JEOL/WinSem (Sue)/Shuttle tile ceramic/SHUTTLEA.IMG:
[testng] [2024-10-30 02:03:43,424] [pool-1-thread-10] Initializing /data/steve/Hamamatsu (Keith B)/HIS-16bit-nopack.HIS:
[testng] [2024-10-30 02:03:44,017] [pool-1-thread-6] Initializing /data/steve/TopoMetrix/Topo SFM (SC)/PA7.TFR:
[testng] [2024-10-30 02:03:44,563] [pool-1-thread-1] Initializing /data/steve/TopoMetrix/Topo STM v5 (Ewald B)/c80-50zfr.tif:
[testng] [2024-10-30 02:03:46,371] [pool-1-thread-2] Initializing /data/steve/TIFF/Macrophage cell images/T48-44 800 24-bit.tif:
[testng] [2024-10-30 02:03:48,187] [pool-1-thread-8] Initializing /data/steve/Molecular Imaging/Mol Imag v5.0 (Lionel S)/Cu#18-NaOH-035.STP:
[testng] [2024-10-30 02:03:49,141] [pool-1-thread-4] Initializing /data/steve/FITS/M13.fits:
[testng] [2024-10-30 02:03:49,557] [pool-1-thread-5] Initializing /data/steve/TIFF/Macrophage cell images/RT1-f-24 1600 24-bit.tif:
[testng] [2024-10-30 02:03:51,667] [pool-1-thread-7] Initializing /data/steve/SBIG/M81 H 250s Tr=5s:
[testng] [2024-10-30 02:03:53,833] [pool-1-thread-9] Initializing /data/steve/Misc SXM test images/Chromosome images/HRhuman1.pict:
[testng] [2024-10-30 02:03:54,383] [pool-1-thread-11] Initializing /data/steve/RHK Tech/RHK (Bob Baker)/Examp_04.SM2:
[testng] [2024-10-30 02:03:55,690] [pool-1-thread-4] Initializing /data/steve/Hamamatsu (Keith B)/HIS-16bit-packed.HIS:
[testng] [2024-10-30 02:03:56,379] [pool-1-thread-12] Initializing /data/steve/JEOL/WinSem (Sue)/TA.IMG:
[testng] [2024-10-30 02:03:57,826] [pool-1-thread-10] Initializing /data/steve/Quesant Instr/Quesant v1.2 (Marc F)/afm2.afm:
[testng] [2024-10-30 02:03:58,529] [pool-1-thread-6] Initializing /data/steve/Burleigh/Burleigh v2/Burleigh v2 (Phil W)/0_h4_3.img:
[testng] [2024-10-30 02:04:00,685] [pool-1-thread-8] Initializing /data/steve/Gatan/Gatan (Sue D)/THE FLY 3:
[testng] [2024-10-30 02:04:01,863] [pool-1-thread-3] Initializing /data/steve/JEOL/WinSem (Sue)/RICK1.IMG:
[testng] [2024-10-30 02:04:02,748] [pool-1-thread-9] Initializing /data/steve/RHK Tech/RHK STS (Peter Sloan)/SloanSpec.SM2:
[testng] [2024-10-30 02:04:03,403] [pool-1-thread-11] Initializing /data/steve/SBIG/M81 M 40s:
[testng] [2024-10-30 02:04:05,541] [pool-1-thread-4] Initializing /data/steve/Hamamatsu (Keith B)/HIS-8bit.HIS:
[testng] [2024-10-30 02:04:06,850] [pool-1-thread-1] Initializing /data/steve/JEOL/WinSem (Sue)/Shuttle tile ceramic/SHUTTLEC.IMG:
[testng] [2024-10-30 02:04:07,745] [pool-1-thread-2] Initializing /data/steve/RHK Tech/RHK-XPM Pro (Lydie L)/B70417000Q.SM3:
[testng] [2024-10-30 02:04:08,443] [pool-1-thread-10] Initializing /data/steve/Gatan/Gatan PC (Eric Leroy)/BF super alliage.dm3:
[testng] [2024-10-30 02:04:08,857] [pool-1-thread-8] Initializing /data/steve/Hamamatsu (Keith B)/HIS-12bit-2b.HIS:
[testng] [2024-10-30 02:04:09,543] [pool-1-thread-7] Initializing /data/steve/TIFF/Little owl TIFF:
[testng] [2024-10-30 02:04:12,775] [pool-1-thread-9] Initializing /data/steve/Misc SXM test images/Fake STM/Fake STM (4 rpts) TIFF:
[testng] [2024-10-30 02:04:14,709] [pool-1-thread-5] Initializing /data/steve/SM-Camera/W(110)+Fe,5nA,30min@110eV:
[testng] [2024-10-30 02:04:16,899] [pool-1-thread-4] Initializing /data/steve/TIFF/CD-ROM TIFF:
[testng] [2024-10-30 02:04:19,052] [pool-1-thread-12] Initializing /data/steve/Molecular Imaging/Mol Imag v4.19 (Michael Z)/Wafer_vesicles_2min_010.STP:
[testng] [2024-10-30 02:04:19,820] [pool-1-thread-10] Initializing /data/steve/JEOL/SPM (Hiroyuki Isobe)/990301c.tif:
[testng] [2024-10-30 02:04:22,065] [pool-1-thread-6] Initializing /data/steve/TIFF/8MAR03A.TIFF:
[testng] [2024-10-30 02:04:24,538] [pool-1-thread-2] Initializing /data/steve/Gatan/Gatan (Sue D)/THE FLY 2:
[testng] [2024-10-30 02:04:25,197] [pool-1-thread-11] Initializing /data/steve/Molecular Imaging/Mol Imag v5.2 (Steve Higgins)/015.STP:
[testng] [2024-10-30 02:04:25,924] [pool-1-thread-8] Initializing /data/steve/RHK Tech/RHK-XPM Pro (Lydie L)/B70417000K.SM3:
[testng] [2024-10-30 02:04:26,563] [pool-1-thread-3] Initializing /data/steve/RHK Tech/RHK STS (Peter Sloan)/B50303AS.SM2:
[testng] [2024-10-30 02:04:28,722] [pool-1-thread-12] Initializing /data/steve/JEOL/JSM (Inger Ekvell)/g11@0.IMG:
[testng] [2024-10-30 02:04:29,840] [pool-1-thread-2] Initializing /data/steve/Misc SXM test images/AVI movie/Clean Cu(110) LEED.avi:
[testng] [2024-10-30 02:04:30,384] [pool-1-thread-1] Initializing /data/steve/Misc SXM test images/Chromosome images/HKGmaizeMei3.pict:
[testng] [2024-10-30 02:04:30,975] [pool-1-thread-11] Initializing /data/steve/JEOL/WinSem (Sue)/Shuttle tile ceramic/SHUTTLEB.IMG:
[testng] [2024-10-30 02:04:31,890] [pool-1-thread-9] Initializing /data/steve/Seiko Instr (Hwansoo)/05808001.xqd:
[testng] [2024-10-30 02:04:32,440] [pool-1-thread-7] Initializing /data/steve/Molecular Imaging/Mol Imag v5.2 (Steve Higgins)/014.STP:
[testng] [2024-10-30 02:04:33,154] [pool-1-thread-8] Initializing /data/steve/TopoMetrix/Topo STM v4 (Gabriella)/159HF02.ZFP:
[testng] [2024-10-30 02:04:33,815] [pool-1-thread-10] Initializing /data/steve/Philips (Markus G)/135-30.IMG:
[testng] [2024-10-30 02:04:34,463] [pool-1-thread-4] Initializing /data/steve/Leica TCS (Keith B)/25_5BB.SXM:
[testng] [2024-10-30 02:04:36,013] [pool-1-thread-5] Initializing /data/steve/Quesant Instr/Quesant v1.2 (Marc F)/stm3.afm:
[testng] [2024-10-30 02:04:36,564] [pool-1-thread-3] Initializing /data/steve/TIFF/Macrophage cell images/Pre-d-0 1392 36-bit.tif:
[testng] [2024-10-30 02:04:38,668] [pool-1-thread-2] Initializing /data/steve/TopoMetrix/Topo STM v5 (Ewald B)/c80-50.zfr:
[testng] [2024-10-30 02:04:39,326] [pool-1-thread-1] Initializing /data/steve/JPK Instr (Christian L)/Virus.jpk:
[testng] [2024-10-30 02:04:40,337] [pool-1-thread-6] Initializing /data/steve/Molecular Imaging/Mol Imag v4.18 (Reinat)/car-mac-con-g_003.STP:
[testng] [2024-10-30 02:04:40,879] [pool-1-thread-12] Initializing /data/steve/RHK Tech/RHK (Mark Flowers)/Demo04.sm2:
[testng]
[testng] ===============================================
[testng] Bio-Formats software test suite
[testng] Total tests run: 8480, Failures: 0, Skips: 0
[testng] ===============================================
[testng]
BUILD SUCCESSFUL
Total time: 13 minutes 17 seconds
Finished: SUCCESS