Started by upstream project "BIOFORMATS-test-repo" build number 240
originally caused by:
Started by upstream project "Trigger" build number 265
originally caused by:
Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@5
[BIOFORMATS-test-folder@5] $ /bin/bash -xe /tmp/jenkins11182434652246312522.sh
+ '[' gatan = slidebook ']'
++ date +%u
+ '[' 4 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_37679_merge_ci -v /uod/idr/repos/curated/gatan:/data -v /uod/idr-scratch/merge-ci/curated/gatan:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
[echo] isSnapshot = true
init-title:
[echo] ----------=========== bio-formats-testing-framework ===========----------
init-timestamp:
init:
copy-resources:
compile:
[resolver:resolve] Resolving artifacts
compile-tests:
[resolver:resolve] Resolving artifacts
[javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
[javac] warning: [options] bootstrap class path not set in conjunction with -source 8
[javac] warning: [options] source value 8 is obsolete and will be removed in a future release
[javac] warning: [options] target value 8 is obsolete and will be removed in a future release
[javac] warning: [options] To suppress warnings about obsolete options, use -Xlint:-options.
[javac] 4 warnings
test-automated:
[testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket
[testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket
[testng] File leak detector installed
[testng] 00:21:40,886 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
[testng] 00:21:40,887 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - No custom configurators were discovered as a service.
[testng] 00:21:40,887 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 00:21:40,888 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 00:21:40,889 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
[testng] 00:21:40,889 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
[testng] 00:21:40,889 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
[testng] 00:21:40,889 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 00:21:40,890 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 00:21:40,890 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
[testng] 00:21:40,891 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
[testng] 00:21:40,891 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
[testng] 00:21:41,060 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
[testng] 00:21:41,060 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
[testng] 00:21:41,086 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
[testng] 00:21:41,086 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
[testng] 00:21:41,093 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
[testng] 00:21:41,093 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
[testng] 00:21:41,093 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
[testng] 00:21:41,093 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
[testng] 00:21:41,093 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@29215f06 - End of configuration.
[testng] 00:21:41,094 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@b9b00e0 - Registering current configuration as safe fallback point
[testng] 00:21:41,094 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 204 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
[testng] [2024-10-31 00:21:41,103] [main] java.version = 21
[testng] 00:21:41,106 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
[testng] 00:21:41,106 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:21:41,151 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-10-31_00-21-41.log]
[testng] 00:21:41,153 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1b919693 - End of configuration.
[testng] [2024-10-31 00:21:41,155] [main] testng.directory = /data
[testng] [2024-10-31 00:21:41,155] [main] testng.configDirectory = /config
[testng] [2024-10-31 00:21:41,164] [main] testng.multiplier = 1.0
[testng] [2024-10-31 00:21:41,165] [main] testng.in-memory = false
[testng] [2024-10-31 00:21:41,165] [main] testng.allow-missing = false
[testng] [2024-10-31 00:21:41,165] [main] user.language = en
[testng] [2024-10-31 00:21:41,165] [main] user.country = ${user.country}
[testng] [2024-10-31 00:21:41,165] [main] Maximum heap size = 15360 MB
[testng] Scanning for files...
[testng] [2024-10-31 00:21:43,682] [main] ----------------------------------------
[testng] [2024-10-31 00:21:43,682] [main] Total files: 103
[testng] [2024-10-31 00:21:43,682] [main] Scan time: 2.517 s (24 ms/file)
[testng] [2024-10-31 00:21:43,682] [main] ----------------------------------------
[testng] Building list of tests...
[testng] Ready to test 98 files
[testng] [TestNG] Running:
[testng] Bio-Formats software test suite
[testng]
[testng] [2024-10-31 00:21:58,163] [pool-1-thread-1] Initializing /data/jay/samples/APC2a-e4.tif:
[testng] 00:21:58,164 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
[testng] 00:21:58,164 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:21:58,165 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-10-31_00-21-58.log]
[testng] 00:21:58,166 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6a1fbf1d - End of configuration.
[testng] [2024-10-31 00:21:58,828] [pool-1-thread-12] Initializing /data/public/imagesc-36590/SmallMontage0002.dm4:
[testng] 00:21:58,828 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
[testng] 00:21:58,828 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:21:58,829 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-10-31_00-21-58.log]
[testng] 00:21:58,829 |-INFO in ch.qos.logback.core.sift.SiftProcessor@43a7d7c - End of configuration.
[testng] [2024-10-31 00:21:58,901] [pool-1-thread-11] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0000.dm4:
[testng] 00:21:58,902 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
[testng] 00:21:58,902 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:21:58,903 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-10-31_00-21-58.log]
[testng] 00:21:58,903 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5161eacf - End of configuration.
[testng] [2024-10-31 00:21:59,003] [pool-1-thread-10] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0005.dm4:
[testng] 00:21:59,003 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
[testng] 00:21:59,003 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:21:59,004 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-10-31_00-21-59.log]
[testng] 00:21:59,004 |-INFO in ch.qos.logback.core.sift.SiftProcessor@266e47f5 - End of configuration.
[testng] [2024-10-31 00:21:59,118] [pool-1-thread-9] Initializing /data/public/imagesc-36590/SmallMontage0006.dm4:
[testng] 00:21:59,118 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
[testng] 00:21:59,118 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:21:59,119 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-10-31_00-21-59.log]
[testng] 00:21:59,120 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6ad6f042 - End of configuration.
[testng] [2024-10-31 00:21:59,221] [pool-1-thread-8] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0015.dm4:
[testng] 00:21:59,221 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
[testng] 00:21:59,221 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:21:59,222 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-10-31_00-21-59.log]
[testng] 00:21:59,222 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2d3e9773 - End of configuration.
[testng] [2024-10-31 00:21:59,312] [pool-1-thread-7] Initializing /data/jay/biosamplefullframetif.tif:
[testng] 00:21:59,312 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
[testng] 00:21:59,312 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:21:59,313 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-10-31_00-21-59.log]
[testng] 00:21:59,313 |-INFO in ch.qos.logback.core.sift.SiftProcessor@246e4a0a - End of configuration.
[testng] [2024-10-31 00:22:00,235] [pool-1-thread-6] Initializing /data/jay/Carbon.34.dm3:
[testng] 00:22:00,235 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
[testng] 00:22:00,235 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:22:00,236 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-10-31_00-22-00.log]
[testng] 00:22:00,236 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6a2ef527 - End of configuration.
[testng] [2024-10-31 00:22:00,373] [pool-1-thread-5] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-360.dm3:
[testng] 00:22:00,373 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
[testng] 00:22:00,373 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:22:00,374 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-10-31_00-22-00.log]
[testng] 00:22:00,374 |-INFO in ch.qos.logback.core.sift.SiftProcessor@27ef0e2d - End of configuration.
[testng] [2024-10-31 00:22:00,555] [pool-1-thread-4] Initializing /data/public/EMPIAR/EMPIAR-10013/BGal_000438_frames.dm4:
[testng] 00:22:00,555 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
[testng] 00:22:00,556 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:22:00,557 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-10-31_00-22-00.log]
[testng] 00:22:00,557 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7909862b - End of configuration.
[testng] [2024-10-31 00:22:00,691] [pool-1-thread-3] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0007.dm4:
[testng] 00:22:00,692 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
[testng] 00:22:00,692 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:22:00,692 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-10-31_00-22-00.log]
[testng] 00:22:00,693 |-INFO in ch.qos.logback.core.sift.SiftProcessor@718c0848 - End of configuration.
[testng] [2024-10-31 00:22:00,851] [pool-1-thread-2] Initializing /data/jayne/AM-2/MonGb3-S3.dm3:
[testng] 00:22:00,851 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
[testng] 00:22:00,851 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:22:00,852 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-10-31_00-22-00.log]
[testng] 00:22:00,852 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2d183be5 - End of configuration.
[testng] [2024-10-31 00:22:03,968] [pool-1-thread-9] Initializing /data/jay/recAmag6500dm.dm3:
[testng] [2024-10-31 00:22:04,099] [pool-1-thread-12] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0046.dm4:
[testng] [2024-10-31 00:22:05,139] [pool-1-thread-8] Initializing /data/jayne/AM-2/MonGb2-S9.dm3:
[testng] [2024-10-31 00:22:05,366] [pool-1-thread-11] Initializing /data/public/imagesc-36590/SmallMontage0004.dm4:
[testng] [2024-10-31 00:22:05,709] [pool-1-thread-10] Initializing /data/sindhu/cropped/JC76-G1-80000.0V-15000X-Sindhu-362-1020x1020.tif:
[testng] [2024-10-31 00:22:06,716] [pool-1-thread-3] Initializing /data/jay/DMtest.dm3:
[testng] [2024-10-31 00:22:06,930] [pool-1-thread-4] Initializing /data/jay/smallerfile.dm3:
[testng] [2024-10-31 00:22:07,295] [pool-1-thread-2] Initializing /data/jay/dnasample.tif:
[testng] [2024-10-31 00:22:08,244] [pool-1-thread-5] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0049.dm4:
[testng] [2024-10-31 00:22:08,428] [pool-1-thread-6] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0009.dm4:
[testng] [2024-10-31 00:22:08,710] [pool-1-thread-1] Initializing /data/qa-7642/8.dm4:
[testng] [2024-10-31 00:22:09,827] [pool-1-thread-7] Initializing /data/qa-21647/Sample2_L1-0002.dm4:
[testng] [2024-10-31 00:22:09,961] [pool-1-thread-11] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-363.dm3:
[testng] [2024-10-31 00:22:10,117] [pool-1-thread-9] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-362.tif:
[testng] [2024-10-31 00:22:11,089] [pool-1-thread-4] Initializing /data/melissa/annotation-test.tif:
[testng] [2024-10-31 00:22:12,599] [pool-1-thread-3] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0053.dm4:
[testng] [2024-10-31 00:22:12,738] [pool-1-thread-8] Initializing /data/public/imagesc-36590/SmallMontage0001.dm4:
[testng] [2024-10-31 00:22:12,902] [pool-1-thread-7] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0050.dm4:
[testng] [2024-10-31 00:22:13,390] [pool-1-thread-6] Initializing /data/jayne/AM-2/MonGb3-S1.dm3:
[testng] [2024-10-31 00:22:14,005] [pool-1-thread-1] Initializing /data/jay/samples/APC2a-e3.dm3:
[testng] [2024-10-31 00:22:15,075] [pool-1-thread-10] Initializing /data/imagesc-3719/Prefix_BSE_slice_0001.dm4:
[testng] [2024-10-31 00:22:15,233] [pool-1-thread-8] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0003.dm4:
[testng] [2024-10-31 00:22:16,310] [pool-1-thread-11] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0047.dm4:
[testng] [2024-10-31 00:22:16,782] [pool-1-thread-1] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-360.tif:
[testng] [2024-10-31 00:22:17,687] [pool-1-thread-4] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0048.dm4:
[testng] [2024-10-31 00:22:18,196] [pool-1-thread-2] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0008.dm4:
[testng] [2024-10-31 00:22:18,891] [pool-1-thread-8] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-256x256.tif:
[testng] [2024-10-31 00:22:19,903] [pool-1-thread-6] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0016.dm4:
[testng] [2024-10-31 00:22:20,309] [pool-1-thread-12] Initializing /data/jay/samples/APC2a-e4.dm3:
[testng] [2024-10-31 00:22:21,410] [pool-1-thread-9] Initializing /data/jay/DMtest2.dm3:
[testng] [2024-10-31 00:22:22,281] [pool-1-thread-2] Initializing /data/jayne/AM-2/MonGb2-S8.dm3:
[testng] [2024-10-31 00:22:22,980] [pool-1-thread-12] Initializing /data/ofra/lowloss.dm3:
[testng] [2024-10-31 00:22:23,610] [pool-1-thread-6] Initializing /data/samples/test-tiles.dm3:
[testng] [2024-10-31 00:22:24,424] [pool-1-thread-12] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0017.dm4:
[testng] [2024-10-31 00:22:25,071] [pool-1-thread-8] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-362-smaller.tif:
[testng] [2024-10-31 00:22:26,033] [pool-1-thread-6] Initializing /data/jay/samples/APC2a-e5.dm3:
[testng] [2024-10-31 00:22:26,893] [pool-1-thread-2] Initializing /data/jay/dnasample1.dm3:
[testng] [2024-10-31 00:22:27,147] [pool-1-thread-9] Initializing /data/jay/samples/APC2a-e3.tif:
[testng] [2024-10-31 00:22:28,335] [pool-1-thread-5] Initializing /data/public/imagesc-36590/SmallMontage0003.dm4:
[testng] [2024-10-31 00:22:29,055] [pool-1-thread-6] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-364.dm3:
[testng] [2024-10-31 00:22:29,209] [pool-1-thread-12] Initializing /data/public/imagesc-36590/SmallMontage0000.dm4:
[testng] [2024-10-31 00:22:29,433] [pool-1-thread-1] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-360.tif:
[testng] [2024-10-31 00:22:30,768] [pool-1-thread-3] Initializing /data/nuno/Prefix_3VBSED_stack_30_slice_0290.dm3:
[testng] [2024-10-31 00:22:30,923] [pool-1-thread-7] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0018.dm4:
[testng] [2024-10-31 00:22:31,106] [pool-1-thread-10] Initializing /data/thorsten/60kx_HAADF_03.dm3:
[testng] [2024-10-31 00:22:31,613] [pool-1-thread-5] Initializing /data/public/imagesc-36590/SmallMontage0005.dm4:
[testng] [2024-10-31 00:22:32,259] [pool-1-thread-12] Initializing /data/jay/biosamplefullframe.dm3:
[testng] [2024-10-31 00:22:33,033] [pool-1-thread-10] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-128x128.tif:
[testng] [2024-10-31 00:22:33,945] [pool-1-thread-8] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0013.dm4:
[testng] [2024-10-31 00:22:34,124] [pool-1-thread-11] Initializing /data/public/imagesc-36590/SmallMontage0008.dm4:
[testng] [2024-10-31 00:22:34,281] [pool-1-thread-5] Initializing /data/nuno/Prefix_3VBSED_slice_0011.dm3:
[testng] [2024-10-31 00:22:34,544] [pool-1-thread-7] Initializing /data/imagesc-3719/Heart_BSE_slice_0019.dm4:
[testng] [2024-10-31 00:22:34,758] [pool-1-thread-4] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0012.dm4:
[testng] [2024-10-31 00:22:35,011] [pool-1-thread-6] Initializing /data/qa-8007/Prefix_3VBSED_slice_0011.dm3:
[testng] [2024-10-31 00:22:35,174] [pool-1-thread-2] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0052.dm4:
[testng] [2024-10-31 00:22:35,390] [pool-1-thread-9] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-364.tif:
[testng] [2024-10-31 00:22:37,811] [pool-1-thread-11] Initializing /data/jay/samples/APC2a-e5.tif:
[testng] [2024-10-31 00:22:38,806] [pool-1-thread-12] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0045.dm4:
[testng] [2024-10-31 00:22:39,279] [pool-1-thread-6] Initializing /data/qa-21652/E coli phage H2O_100000.0V_67000X.tif:
[testng] [2024-10-31 00:22:40,201] [pool-1-thread-5] Initializing /data/jay/camtest1.dm3:
[testng] [2024-10-31 00:22:40,656] [pool-1-thread-8] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0002.dm4:
[testng] [2024-10-31 00:22:40,985] [pool-1-thread-4] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0010.dm4:
[testng] [2024-10-31 00:22:41,642] [pool-1-thread-3] Initializing /data/chip/Nanogold-1.dm3:
[testng] [2024-10-31 00:22:42,150] [pool-1-thread-10] Initializing /data/melissa/annotation-test.dm3:
[testng] [2024-10-31 00:22:42,290] [pool-1-thread-1] Initializing /data/jay/recAmaghi.dm3:
[testng] [2024-10-31 00:22:43,194] [pool-1-thread-7] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-96x96.tif:
[testng] [2024-10-31 00:22:44,973] [pool-1-thread-10] Initializing /data/public/imagesc-36590/SmallMontage0007.dm4:
[testng] [2024-10-31 00:22:45,327] [pool-1-thread-8] Initializing /data/samples/mode-metadata/mode_format_test.dm3:
[testng] [2024-10-31 00:22:45,482] [pool-1-thread-4] Initializing /data/sindhu/cropped/JC76-G1-80000.0V-15000X-Sindhu-362-799x799.tif:
[testng] [2024-10-31 00:22:46,794] [pool-1-thread-5] Initializing /data/qa-21652/E coli phage H2O_100000.0V_67000X.dm4:
[testng] [2024-10-31 00:22:47,591] [pool-1-thread-10] Initializing /data/qa-11392/Example_Gatan_File.dm4:
[testng] [2024-10-31 00:22:47,779] [pool-1-thread-1] Initializing /data/jay/ViewDMtest.dm3:
[testng] [2024-10-31 00:22:48,077] [pool-1-thread-11] Initializing /data/jayne/AM-2/MonGb2-S7.dm3:
[testng] [2024-10-31 00:22:48,736] [pool-1-thread-6] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0019.dm4:
[testng] [2024-10-31 00:22:48,927] [pool-1-thread-5] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0004.dm4:
[testng] [2024-10-31 00:22:49,602] [pool-1-thread-9] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0014.dm4:
[testng] [2024-10-31 00:22:49,786] [pool-1-thread-3] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-362.tif:
[testng] [2024-10-31 00:22:51,277] [pool-1-thread-7] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0051.dm4:
[testng] [2024-10-31 00:22:51,443] [pool-1-thread-8] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0001.dm4:
[testng] [2024-10-31 00:22:52,186] [pool-1-thread-11] Initializing /data/qa-21761/example.dm4:
[testng] [2024-10-31 00:22:52,766] [pool-1-thread-6] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0006.dm4:
[testng] [2024-10-31 00:22:53,048] [pool-1-thread-5] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0011.dm4:
[testng] [2024-10-31 00:22:53,663] [pool-1-thread-1] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-480x480.tif:
[testng] [2024-10-31 00:22:54,595] [pool-1-thread-4] Initializing /data/jay/graphitedm3.dm3:
[testng] [2024-10-31 00:22:54,732] [pool-1-thread-9] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-26000X-Sindhu-364.tif:
[testng] [2024-10-31 00:22:56,130] [pool-1-thread-12] Initializing /data/ofra/Co on INT 28-12-10.11.dm3:
[testng]
[testng] ===============================================
[testng] Bio-Formats software test suite
[testng] Total tests run: 5194, Failures: 0, Skips: 0
[testng] ===============================================
[testng]
BUILD SUCCESSFUL
Total time: 1 minute 29 seconds
Finished: SUCCESS