Started by upstream project "BIOFORMATS-test-repo" build number 240
originally caused by:
Started by upstream project "Trigger" build number 265
originally caused by:
Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@3
[BIOFORMATS-test-folder@3] $ /bin/bash -xe /tmp/jenkins8203275507443741665.sh
+ '[' zeiss-tiff = slidebook ']'
++ date +%u
+ '[' 4 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_37805_merge_ci -v /uod/idr/repos/curated/zeiss-tiff:/data -v /uod/idr-scratch/merge-ci/curated/zeiss-tiff:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
[echo] isSnapshot = true
init-title:
[echo] ----------=========== bio-formats-testing-framework ===========----------
init-timestamp:
init:
copy-resources:
compile:
[resolver:resolve] Resolving artifacts
compile-tests:
[resolver:resolve] Resolving artifacts
[javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
[javac] warning: [options] bootstrap class path not set in conjunction with -source 8
[javac] warning: [options] source value 8 is obsolete and will be removed in a future release
[javac] warning: [options] target value 8 is obsolete and will be removed in a future release
[javac] warning: [options] To suppress warnings about obsolete options, use -Xlint:-options.
[javac] 4 warnings
test-automated:
[testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket
[testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket
[testng] File leak detector installed
[testng] 02:47:21,377 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
[testng] 02:47:21,378 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - No custom configurators were discovered as a service.
[testng] 02:47:21,378 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 02:47:21,379 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 02:47:21,380 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
[testng] 02:47:21,380 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
[testng] 02:47:21,380 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
[testng] 02:47:21,380 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 02:47:21,381 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 02:47:21,381 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
[testng] 02:47:21,382 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
[testng] 02:47:21,382 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
[testng] 02:47:21,577 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
[testng] 02:47:21,577 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
[testng] 02:47:21,616 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
[testng] 02:47:21,616 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
[testng] 02:47:21,626 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
[testng] 02:47:21,626 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
[testng] 02:47:21,626 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
[testng] 02:47:21,626 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
[testng] 02:47:21,627 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@29215f06 - End of configuration.
[testng] 02:47:21,627 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@b9b00e0 - Registering current configuration as safe fallback point
[testng] 02:47:21,628 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 247 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
[testng] [2024-10-31 02:47:21,638] [main] java.version = 21
[testng] 02:47:21,642 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
[testng] 02:47:21,642 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:47:21,688 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-10-31_02-47-21.log]
[testng] 02:47:21,690 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1b919693 - End of configuration.
[testng] [2024-10-31 02:47:21,692] [main] testng.directory = /data
[testng] [2024-10-31 02:47:21,692] [main] testng.configDirectory = /config
[testng] [2024-10-31 02:47:21,701] [main] testng.multiplier = 1.0
[testng] [2024-10-31 02:47:21,702] [main] testng.in-memory = false
[testng] [2024-10-31 02:47:21,702] [main] testng.allow-missing = false
[testng] [2024-10-31 02:47:21,702] [main] user.language = en
[testng] [2024-10-31 02:47:21,702] [main] user.country = ${user.country}
[testng] [2024-10-31 02:47:21,702] [main] Maximum heap size = 15360 MB
[testng] Scanning for files...
[testng] [2024-10-31 02:48:37,302] [main] ----------------------------------------
[testng] [2024-10-31 02:48:37,302] [main] Total files: 15735
[testng] [2024-10-31 02:48:37,302] [main] Scan time: 75.6 s (4 ms/file)
[testng] [2024-10-31 02:48:37,303] [main] ----------------------------------------
[testng] Building list of tests...
[testng] Ready to test 125 files
[testng] [TestNG] Running:
[testng] Bio-Formats software test suite
[testng]
[testng] [2024-10-31 02:51:07,837] [pool-1-thread-1] Initializing /data/converted/markus/PC12_neuroblastoma_Fura2_exp#9.tif:
[testng] 02:51:07,838 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
[testng] 02:51:07,838 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:51:07,839 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-10-31_02-51-07.log]
[testng] 02:51:07,840 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6e2487e8 - End of configuration.
[testng] [2024-10-31 02:51:08,851] [pool-1-thread-12] Initializing /data/converted/joseph/E-2009_0022.tif:
[testng] 02:51:08,852 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
[testng] 02:51:08,852 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:51:08,853 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-10-31_02-51-08.log]
[testng] 02:51:08,854 |-INFO in ch.qos.logback.core.sift.SiftProcessor@16d2926d - End of configuration.
[testng] [2024-10-31 02:51:10,289] [pool-1-thread-11] Initializing /data/samples/mri-stack/mri-stack.tif:
[testng] 02:51:10,289 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
[testng] 02:51:10,290 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:51:10,290 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-10-31_02-51-10.log]
[testng] 02:51:10,291 |-INFO in ch.qos.logback.core.sift.SiftProcessor@38682ecb - End of configuration.
[testng] [2024-10-31 02:51:11,217] [pool-1-thread-10] Initializing /data/converted/monica/Monica_elegans_movie.tif:
[testng] 02:51:11,217 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
[testng] 02:51:11,217 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:51:11,218 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-10-31_02-51-11.log]
[testng] 02:51:11,218 |-INFO in ch.qos.logback.core.sift.SiftProcessor@67b2b86 - End of configuration.
[testng] [2024-10-31 02:51:13,271] [pool-1-thread-9] Initializing /data/converted/dan/zstack_convalaria.tif:
[testng] 02:51:13,271 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
[testng] 02:51:13,271 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:51:13,272 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-10-31_02-51-13.log]
[testng] 02:51:13,272 |-INFO in ch.qos.logback.core.sift.SiftProcessor@567fb3f1 - End of configuration.
[testng] [2024-10-31 02:51:13,935] [pool-1-thread-8] Initializing /data/converted/lior/live+cf5b.tif:
[testng] 02:51:13,935 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
[testng] 02:51:13,935 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:51:13,936 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-10-31_02-51-13.log]
[testng] 02:51:13,936 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4353f70d - End of configuration.
[testng] [2024-10-31 02:51:15,125] [pool-1-thread-7] Initializing /data/scott/Slide133-01.tif:
[testng] 02:51:15,126 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
[testng] 02:51:15,126 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:51:15,127 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-10-31_02-51-15.log]
[testng] 02:51:15,127 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4b6882a5 - End of configuration.
[testng] [2024-10-31 02:51:16,268] [pool-1-thread-6] Initializing /data/scott/Slide133-04.tif:
[testng] 02:51:16,268 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
[testng] 02:51:16,268 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:51:16,269 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-10-31_02-51-16.log]
[testng] 02:51:16,269 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5476e175 - End of configuration.
[testng] [2024-10-31 02:51:17,152] [pool-1-thread-5] Initializing /data/converted/markus/Brain_high_dynamic_range_imaging_Z-stack.tif:
[testng] 02:51:17,152 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
[testng] 02:51:17,152 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:51:17,153 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-10-31_02-51-17.log]
[testng] 02:51:17,153 |-INFO in ch.qos.logback.core.sift.SiftProcessor@50a1e1d5 - End of configuration.
[testng] [2024-10-31 02:51:18,052] [pool-1-thread-4] Initializing /data/converted/jeffrey/750-30-03.tif:
[testng] 02:51:18,052 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
[testng] 02:51:18,052 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:51:18,053 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-10-31_02-51-18.log]
[testng] 02:51:18,054 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3d416c16 - End of configuration.
[testng] [2024-10-31 02:51:18,766] [pool-1-thread-3] Initializing /data/qa-21570/250618_J1_diff_D3-2-0004.tif:
[testng] 02:51:18,766 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
[testng] 02:51:18,766 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:51:18,767 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-10-31_02-51-18.log]
[testng] 02:51:18,767 |-INFO in ch.qos.logback.core.sift.SiftProcessor@750ddb90 - End of configuration.
[testng] [2024-10-31 02:51:19,449] [pool-1-thread-2] Initializing /data/scott/Slide133-08.tif:
[testng] 02:51:19,449 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
[testng] 02:51:19,449 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:51:19,450 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-10-31_02-51-19.log]
[testng] 02:51:19,450 |-INFO in ch.qos.logback.core.sift.SiftProcessor@509508d6 - End of configuration.
[testng] [2024-10-31 02:51:36,757] [pool-1-thread-11] Initializing /data/converted/michel/c.tif:
[testng] [2024-10-31 02:51:37,799] [pool-1-thread-3] Initializing /data/converted/dietmar/hmads-bac1-bac7-af488-rho-af647_pre-2006-03-30-ten.tif:
[testng] [2024-10-31 02:51:42,170] [pool-1-thread-7] Initializing /data/converted/markus/Mouse-newborn-panorama.tif:
[testng] [2024-10-31 02:51:43,091] [pool-1-thread-6] Initializing /data/converted/converted/damian.tif:
[testng] [2024-10-31 02:51:44,058] [pool-1-thread-2] Initializing /data/converted/converted/deconvolve6_pseudo_tl000_zs000.tif:
[testng] [2024-10-31 02:51:45,086] [pool-1-thread-9] Initializing /data/converted/eirinn/12_2_2009-16-hes5-brdu-proper_position(52).tif:
[testng] [2024-10-31 02:51:46,333] [pool-1-thread-4] Initializing /data/converted/sebastien/F1.tif:
[testng] [2024-10-31 02:51:53,626] [pool-1-thread-8] Initializing /data/converted/rachel/40K 30s A2.tif:
[testng] [2024-10-31 02:52:01,882] [pool-1-thread-6] Initializing /data/converted/eirinn/12_16_2009-01-tara-hd-triple-5to15_position(1)5.tif:
[testng] [2024-10-31 02:52:05,389] [pool-1-thread-11] Initializing /data/converted/kelsey/1300x1030BW.tif:
[testng] [2024-10-31 02:52:07,924] [pool-1-thread-2] Initializing /data/converted/markus/Branchiostoma_6x12_MosaiX_Tiles_color.tif:
[testng] [2024-10-31 02:52:19,377] [pool-1-thread-8] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast.tif:
[testng] [2024-10-31 02:52:20,436] [pool-1-thread-7] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_2.tif:
[testng] [2024-10-31 02:52:21,616] [pool-1-thread-11] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_24.tif:
[testng] [2024-10-31 02:53:46,733] [pool-1-thread-5] Initializing /data/converted/markus/Hypocampus_Tiles_with_stiching.tif:
[testng] [2024-10-31 02:54:07,211] [pool-1-thread-4] Initializing /data/scott/Slide133-11.tif:
[testng] [2024-10-31 02:54:19,634] [pool-1-thread-9] Initializing /data/converted/rachel/40K 30s A1.tif:
[testng] [2024-10-31 02:54:27,559] [pool-1-thread-3] Initializing /data/converted/markus/PhaseGFP-MosaiX-Timelapse_Tiles.tif:
[testng] [2024-10-31 02:54:29,002] [pool-1-thread-4] Initializing /data/converted/thomas/test_axiocam_3_1.tif:
[testng] [2024-10-31 02:54:42,811] [pool-1-thread-9] Initializing /data/converted/converted/wtzer_series76_z003_ch00.tif:
[testng] [2024-10-31 02:54:50,030] [pool-1-thread-4] Initializing /data/converted/michel/b.tif:
[testng] [2024-10-31 02:54:58,792] [pool-1-thread-9] Initializing /data/converted/converted/2chzt.tif:
[testng] [2024-10-31 02:55:14,266] [pool-1-thread-4] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_23.tif:
[testng] [2024-10-31 02:55:30,472] [pool-1-thread-5] Initializing /data/converted/joseph/BEST_EXAMPLE_LONGER_EXPOSURE.tif:
[testng] [2024-10-31 02:55:41,530] [pool-1-thread-6] Initializing /data/converted/karsten/Bild2.tif:
[testng] [2024-10-31 02:56:04,973] [pool-1-thread-6] Initializing /data/converted/dan/adultnr1.tif:
[testng] [2024-10-31 02:56:19,793] [pool-1-thread-5] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_19.tif:
[testng] [2024-10-31 02:56:46,034] [pool-1-thread-6] Initializing /data/converted/joseph/E-2009-0001a.tif:
[testng] [2024-10-31 02:56:47,088] [pool-1-thread-2] Initializing /data/converted/markus/Smart_Experiment_4ch-T-time-stitched.tif:
[testng] [2024-10-31 02:57:06,050] [pool-1-thread-7] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast-sectioned.tif:
[testng] [2024-10-31 02:57:36,777] [pool-1-thread-11] Initializing /data/converted/karsten/Bild1.tif:
[testng] [2024-10-31 02:58:00,141] [pool-1-thread-12] Initializing /data/converted/dietmar/dapi-texasred-0015.tif:
[testng] [2024-10-31 02:58:01,405] [pool-1-thread-11] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_1.tif:
[testng] [2024-10-31 02:58:58,636] [pool-1-thread-8] Initializing /data/converted/nicolas/image.tif:
[testng] [2024-10-31 02:59:14,246] [pool-1-thread-8] Initializing /data/converted/james/Sylvain_run3_1Gy_Live7-2008-0019.tif:
[testng] [2024-10-31 03:00:28,765] [pool-1-thread-8] Initializing /data/converted/dietmar/137.tif:
[testng] [2024-10-31 03:00:32,966] [pool-1-thread-4] Initializing /data/converted/eirinn/pharm3-saline2-0147_11.tif:
[testng] [2024-10-31 03:00:49,099] [pool-1-thread-3] Initializing /data/qa-21570/250618_J1_diff_D3-2-0003.tif:
[testng] [2024-10-31 03:01:06,398] [pool-1-thread-3] Initializing /data/converted/markus/Mouse-newborn-panorama_JPEG_5percent_compressed.tif:
[testng] [2024-10-31 03:01:41,770] [pool-1-thread-3] Initializing /data/converted/rolf/example_1-2010_11_25.tif:
[testng] [2024-10-31 03:01:46,875] [pool-1-thread-12] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_22.tif:
[testng] [2024-10-31 03:01:54,295] [pool-1-thread-5] Initializing /data/converted/markus/Long_TL_CElegans.tif:
[testng] [2024-10-31 03:02:04,799] [pool-1-thread-3] Initializing /data/converted/converted/mri-stack.tif:
[testng] [2024-10-31 03:02:25,627] [pool-1-thread-3] Initializing /data/converted/michel/a.tif:
[testng] [2024-10-31 03:02:49,190] [pool-1-thread-3] Initializing /data/converted/sebastien/test.tif:
[testng] [2024-10-31 03:02:52,183] [pool-1-thread-11] Initializing /data/converted/dietmar/hmads-bac1-bac7-af488-rho-af647_pre-2006-03-30-six.tif:
[testng] [2024-10-31 03:03:51,924] [pool-1-thread-6] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_3.tif:
[testng] [2024-10-31 03:05:52,378] [pool-1-thread-7] Initializing /data/converted/ville/MultiCh-RGB/pollen_rgb.tif:
[testng] [2024-10-31 03:06:38,898] [pool-1-thread-7] Initializing /data/othmar/mozaic.tif:
[testng] [2024-10-31 03:07:16,574] [pool-1-thread-4] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_13.tif:
[testng] [2024-10-31 03:08:14,837] [pool-1-thread-11] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_16.tif:
[testng] [2024-10-31 03:08:18,689] [pool-1-thread-8] Initializing /data/converted/rolf/example_2-2010_11_25.tif:
[testng] [2024-10-31 03:08:48,609] [pool-1-thread-8] Initializing /data/converted/converted/2chz.tif:
[testng] [2024-10-31 03:10:26,279] [pool-1-thread-12] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_4.tif:
[testng] [2024-10-31 03:10:36,391] [pool-1-thread-7] Initializing /data/converted/kelsey/650x514BW.tif:
[testng] [2024-10-31 03:10:58,559] [pool-1-thread-7] Initializing /data/dorai/F_ZImage10_(X10)_C.tif:
[testng] [2024-10-31 03:11:14,530] [pool-1-thread-2] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast-sidebyside.tif:
[testng] [2024-10-31 03:11:24,614] [pool-1-thread-7] Initializing /data/converted/darren/section0001_w1.tif:
[testng] [2024-10-31 03:11:36,501] [pool-1-thread-8] Initializing /data/converted/strand/2Colors1Plane.tif:
[testng] [2024-10-31 03:11:52,455] [pool-1-thread-7] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_8.tif:
[testng] [2024-10-31 03:11:56,233] [pool-1-thread-6] Initializing /data/converted/markus/HighSpeedParas.tif:
[testng] [2024-10-31 03:12:05,025] [pool-1-thread-3] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_9.tif:
[testng] [2024-10-31 03:12:29,795] [pool-1-thread-8] Initializing /data/converted/joseph/Alike_best_example_but_WORKS_FINE_maybe_cause_shorter_expose.tif:
[testng] [2024-10-31 03:14:02,172] [pool-1-thread-8] Initializing /data/converted/markus/30channels_exposure-series.tif:
[testng] [2024-10-31 03:14:15,101] [pool-1-thread-4] Initializing /data/converted/david/snap-181518-0001.tif:
[testng] [2024-10-31 03:14:39,526] [pool-1-thread-4] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_25.tif:
[testng] [2024-10-31 03:15:21,347] [pool-1-thread-11] Initializing /data/qa-21570/250618_J1_diff_D3-2-0002.tif:
[testng] [2024-10-31 03:15:42,072] [pool-1-thread-11] Initializing /data/converted/eirinn/11_10_2009-01-lcstim-15-10-09_position(1).tif:
[testng] [2024-10-31 03:15:56,661] [pool-1-thread-8] Initializing /data/converted/ville/MultiCh-RGB/pollen_bw.tif:
[testng] [2024-10-31 03:16:23,569] [pool-1-thread-8] Initializing /data/converted/jan/SampleStack_Mosaic4x5_comb.tif:
[testng] [2024-10-31 03:16:26,468] [pool-1-thread-12] Initializing /data/converted/vladan/vladan.tif:
[testng] [2024-10-31 03:18:17,585] [pool-1-thread-7] Initializing /data/qa-21570/20150421_HepG2_yH2AX_DAPI_0.5h_5GyDOWN_1512_cell04_SIR_ALX.dv_comp.tif:
[testng] [2024-10-31 03:18:26,479] [pool-1-thread-7] Initializing /data/converted/darren/section0002_w1.tif:
[testng] [2024-10-31 03:18:30,024] [pool-1-thread-3] Initializing /data/converted/joseph/E-2009-0004.tif:
[testng] [2024-10-31 03:18:53,741] [pool-1-thread-7] Initializing /data/converted/converted/damian-compressed.tif:
[testng] [2024-10-31 03:19:07,435] [pool-1-thread-11] Initializing /data/converted/michel/d.tif:
[testng] [2024-10-31 03:19:16,464] [pool-1-thread-7] Initializing /data/converted/jonas/10_0907_multidrug-0001_AB01_08.tif:
[testng] [2024-10-31 03:19:36,509] [pool-1-thread-11] Initializing /data/converted/karsten/247096n3s3s9.tif:
[testng] [2024-10-31 03:20:12,672] [pool-1-thread-1] Initializing /data/converted/dietmar/hmads-bac1-bac7-af488-rho-af647_pre-2006-03-30-0016.tif:
[testng] [2024-10-31 03:20:34,151] [pool-1-thread-2] Initializing /data/converted/markus/6ch-Z-stack_deconvolved.tif:
[testng] [2024-10-31 03:21:41,357] [pool-1-thread-11] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast-widefield.tif:
[testng] [2024-10-31 03:22:00,947] [pool-1-thread-12] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_12.tif:
[testng] [2024-10-31 03:22:10,291] [pool-1-thread-4] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_5.tif:
[testng] [2024-10-31 03:22:53,453] [pool-1-thread-1] Initializing /data/converted/eirinn/demo-tile.tif:
[testng] [2024-10-31 03:23:17,969] [pool-1-thread-9] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_21.tif:
[testng] [2024-10-31 03:23:30,075] [pool-1-thread-1] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_6.tif:
[testng] [2024-10-31 03:27:10,662] [pool-1-thread-3] Initializing /data/converted/markus/Mouse-newborn-panorama_lossless_compressed.tif:
[testng] [2024-10-31 03:28:00,822] [pool-1-thread-3] Initializing /data/converted/kelsey/432x342BW.tif:
[testng] [2024-10-31 03:28:25,680] [pool-1-thread-3] Initializing /data/converted/eirinn/5_6_2009-dj9-03_a01_01.tif:
[testng] [2024-10-31 03:29:16,161] [pool-1-thread-3] Initializing /data/converted/lior/live+cf2b.tif:
[testng] [2024-10-31 03:29:22,414] [pool-1-thread-4] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_18.tif:
[testng] [2024-10-31 03:29:39,479] [pool-1-thread-2] Initializing /data/converted/jonas/10_0907_multidrug-0001_AB01_03.tif:
[testng] [2024-10-31 03:29:42,246] [pool-1-thread-12] Initializing /data/converted/markus/MosaiX_irregular_Z-stack_with_autofocus.tif:
[testng] [2024-10-31 03:30:11,266] [pool-1-thread-3] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_11.tif:
[testng] [2024-10-31 03:31:15,087] [pool-1-thread-1] Initializing /data/converted/markus/Confidence_ratio_image_PC12_neuroblastoma_Fura2_exp#9-2.tif:
[testng] [2024-10-31 03:31:30,853] [pool-1-thread-9] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_15.tif:
[testng] [2024-10-31 03:32:28,649] [pool-1-thread-11] Initializing /data/converted/dietmar/hmads-24h-bac1-7-af647-af488-rho-1day-hyb-csk-2007-06-29-0008_position(113).tif:
[testng] [2024-10-31 03:36:23,797] [pool-1-thread-7] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_10.tif:
[testng] [2024-10-31 03:36:46,698] [pool-1-thread-5] Initializing /data/converted/miso/Aufnahme-184058-0002.tif:
[testng] [2024-10-31 03:37:14,760] [pool-1-thread-5] Initializing /data/converted/markus/HeLa-Reggie-GFP_ZT_fast-DCV-CI-measured-PSF.tif:
[testng] [2024-10-31 03:38:09,134] [pool-1-thread-4] Initializing /data/converted/othmar/mozaic.tif:
[testng] [2024-10-31 03:38:17,798] [pool-1-thread-3] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_14.tif:
[testng] [2024-10-31 03:39:35,382] [pool-1-thread-9] Initializing /data/converted/cecilia/day 1 naked nb positive 1-2007-0055.tif:
[testng] [2024-10-31 03:39:48,532] [pool-1-thread-12] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_17.tif:
[testng] [2024-10-31 03:40:07,969] [pool-1-thread-11] Initializing /data/converted/stephan/notok1.tif:
[testng] [2024-10-31 03:40:14,973] [pool-1-thread-9] Initializing /data/converted/stephan/notok2.tif:
[testng] [2024-10-31 03:41:27,366] [pool-1-thread-8] Initializing /data/converted/converted/wtzer_series76_z003_ch00-with-rois.tif:
[testng] [2024-10-31 03:41:49,797] [pool-1-thread-8] Initializing /data/converted/susan/BY4741NQ2.tif:
[testng] [2024-10-31 03:41:53,931] [pool-1-thread-4] Initializing /data/converted/markus/Material_color_image_HRc_microscanned_4x3K.tif:
[testng] [2024-10-31 03:41:55,562] [pool-1-thread-11] Initializing /data/converted/othmar/z-stack.tif:
[testng] [2024-10-31 03:42:01,064] [pool-1-thread-9] Initializing /data/converted/michel/e.tif:
[testng] [2024-10-31 03:42:18,051] [pool-1-thread-8] Initializing /data/converted/dietmar/138.tif:
[testng] [2024-10-31 03:42:23,094] [pool-1-thread-4] Initializing /data/converted/shalin/ibidiuslide1-timelapse3_mid2.tif:
[testng] 04:24:55,015 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
[testng] 04:24:55,015 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 04:24:55,017 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-10-31_04-24-55.log]
[testng] 04:24:55,017 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3310bb28 - End of configuration.
[testng]
[testng] ===============================================
[testng] Bio-Formats software test suite
[testng] Total tests run: 6625, Failures: 0, Skips: 0
[testng] ===============================================
[testng]
BUILD SUCCESSFUL
Total time: 97 minutes 37 seconds
Finished: SUCCESS