Started by upstream project "BIOFORMATS-test-repo" build number 241
originally caused by:
Started by upstream project "Trigger" build number 266
originally caused by:
Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@5
[BIOFORMATS-test-folder@5] $ /bin/bash -xe /tmp/jenkins16057527241135472693.sh
+ '[' hitachi = slidebook ']'
++ date +%u
+ '[' 5 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_37856_merge_ci -v /uod/idr/repos/curated/hitachi:/data -v /uod/idr-scratch/merge-ci/curated/hitachi:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
[echo] isSnapshot = true
init-title:
[echo] ----------=========== bio-formats-testing-framework ===========----------
init-timestamp:
init:
copy-resources:
compile:
[resolver:resolve] Resolving artifacts
compile-tests:
[resolver:resolve] Resolving artifacts
[javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
test-automated:
[testng] File leak detector installed
[testng] 00:24:17,978 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
[testng] 00:24:17,980 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - No custom configurators were discovered as a service.
[testng] 00:24:17,980 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 00:24:17,982 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 00:24:17,982 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
[testng] 00:24:17,982 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
[testng] 00:24:17,982 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 0 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
[testng] 00:24:17,982 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 00:24:17,983 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 00:24:17,983 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
[testng] 00:24:17,983 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
[testng] 00:24:17,983 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
[testng] 00:24:18,225 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
[testng] 00:24:18,225 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
[testng] 00:24:18,255 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
[testng] 00:24:18,256 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
[testng] 00:24:18,264 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
[testng] 00:24:18,265 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
[testng] 00:24:18,265 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
[testng] 00:24:18,265 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
[testng] 00:24:18,265 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@7a69b07 - End of configuration.
[testng] 00:24:18,266 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@636be97c - Registering current configuration as safe fallback point
[testng] 00:24:18,266 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 283 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
[testng] [2024-11-01 00:24:18,276] [main] java.version = 1.8.0_342
[testng] 00:24:18,280 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
[testng] 00:24:18,280 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:24:18,328 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-11-01_00-24-18.log]
[testng] 00:24:18,330 |-INFO in ch.qos.logback.core.sift.SiftProcessor@13c9d689 - End of configuration.
[testng] [2024-11-01 00:24:18,332] [main] testng.directory = /data
[testng] [2024-11-01 00:24:18,333] [main] testng.configDirectory = /config
[testng] [2024-11-01 00:24:18,346] [main] testng.multiplier = 1.0
[testng] [2024-11-01 00:24:18,346] [main] testng.in-memory = false
[testng] [2024-11-01 00:24:18,346] [main] testng.allow-missing = false
[testng] [2024-11-01 00:24:18,347] [main] user.language = en
[testng] [2024-11-01 00:24:18,347] [main] user.country = ${user.country}
[testng] [2024-11-01 00:24:18,347] [main] Maximum heap size = 13653 MB
[testng] Scanning for files...
[testng] [2024-11-01 00:24:34,235] [main] ----------------------------------------
[testng] [2024-11-01 00:24:34,235] [main] Total files: 21
[testng] [2024-11-01 00:24:34,236] [main] Scan time: 15.888 s (756 ms/file)
[testng] [2024-11-01 00:24:34,236] [main] ----------------------------------------
[testng] Building list of tests...
[testng] Ready to test 18 files
[testng] [TestNG] Running:
[testng] Bio-Formats software test suite
[testng]
[testng] [2024-11-01 00:25:06,701] [pool-1-thread-1] Initializing /data/stefan/001_q04.txt:
[testng] 00:25:06,702 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
[testng] 00:25:06,702 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:25:06,703 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-11-01_00-25-06.log]
[testng] 00:25:06,703 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3a670173 - End of configuration.
[testng] [2024-11-01 00:25:07,679] [pool-1-thread-12] Initializing /data/stefan/001_q11.txt:
[testng] 00:25:07,680 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
[testng] 00:25:07,680 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:25:07,680 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-11-01_00-25-07.log]
[testng] 00:25:07,681 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3ebbac8 - End of configuration.
[testng] [2024-11-01 00:25:09,500] [pool-1-thread-11] Initializing /data/stefan/001_q03.txt:
[testng] 00:25:09,500 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
[testng] 00:25:09,500 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:25:09,501 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-11-01_00-25-09.log]
[testng] 00:25:09,501 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5eefb97d - End of configuration.
[testng] [2024-11-01 00:25:10,463] [pool-1-thread-10] Initializing /data/stefan/001_q07.txt:
[testng] 00:25:10,463 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
[testng] 00:25:10,464 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:25:10,464 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-11-01_00-25-10.log]
[testng] 00:25:10,464 |-INFO in ch.qos.logback.core.sift.SiftProcessor@19b5c702 - End of configuration.
[testng] [2024-11-01 00:25:12,323] [pool-1-thread-9] Initializing /data/stefan/001_q13.txt:
[testng] 00:25:12,323 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
[testng] 00:25:12,324 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:25:12,324 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-11-01_00-25-12.log]
[testng] 00:25:12,325 |-INFO in ch.qos.logback.core.sift.SiftProcessor@11a6b54c - End of configuration.
[testng] [2024-11-01 00:25:13,276] [pool-1-thread-8] Initializing /data/stefan/001_q18.txt:
[testng] 00:25:13,277 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
[testng] 00:25:13,277 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:25:13,277 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-11-01_00-25-13.log]
[testng] 00:25:13,278 |-INFO in ch.qos.logback.core.sift.SiftProcessor@e439840 - End of configuration.
[testng] [2024-11-01 00:25:14,373] [pool-1-thread-7] Initializing /data/stefan/001_q01.txt:
[testng] 00:25:14,374 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
[testng] 00:25:14,374 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:25:14,374 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-11-01_00-25-14.log]
[testng] 00:25:14,375 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7b025643 - End of configuration.
[testng] [2024-11-01 00:25:16,118] [pool-1-thread-6] Initializing /data/stefan/001_q15.txt:
[testng] 00:25:16,119 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
[testng] 00:25:16,119 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:25:16,119 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-11-01_00-25-16.log]
[testng] 00:25:16,120 |-INFO in ch.qos.logback.core.sift.SiftProcessor@153b8741 - End of configuration.
[testng] [2024-11-01 00:25:17,876] [pool-1-thread-5] Initializing /data/stefan/001_q10.txt:
[testng] 00:25:17,877 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
[testng] 00:25:17,877 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:25:17,877 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-11-01_00-25-17.log]
[testng] 00:25:17,878 |-INFO in ch.qos.logback.core.sift.SiftProcessor@42b1cf19 - End of configuration.
[testng] [2024-11-01 00:25:20,604] [pool-1-thread-4] Initializing /data/stefan/001_q05.txt:
[testng] 00:25:20,604 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
[testng] 00:25:20,604 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:25:20,605 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-11-01_00-25-20.log]
[testng] 00:25:20,605 |-INFO in ch.qos.logback.core.sift.SiftProcessor@510f8af3 - End of configuration.
[testng] [2024-11-01 00:25:22,421] [pool-1-thread-3] Initializing /data/stefan/001_q09.txt:
[testng] 00:25:22,421 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
[testng] 00:25:22,421 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:25:22,422 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-11-01_00-25-22.log]
[testng] 00:25:22,422 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4cf392a4 - End of configuration.
[testng] [2024-11-01 00:25:24,370] [pool-1-thread-2] Initializing /data/stefan/001_q06.txt:
[testng] 00:25:24,370 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
[testng] 00:25:24,370 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:25:24,371 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-11-01_00-25-24.log]
[testng] 00:25:24,372 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5c1aaa54 - End of configuration.
[testng] [2024-11-01 00:25:43,026] [pool-1-thread-7] Initializing /data/stefan/001_q14.txt:
[testng] [2024-11-01 00:25:44,857] [pool-1-thread-11] Initializing /data/stefan/001_q16.txt:
[testng] [2024-11-01 00:25:46,896] [pool-1-thread-1] Initializing /data/stefan/001_q08.txt:
[testng] [2024-11-01 00:25:48,863] [pool-1-thread-6] Initializing /data/stefan/001_q12.txt:
[testng] [2024-11-01 00:25:51,408] [pool-1-thread-4] Initializing /data/stefan/001_q02.txt:
[testng] [2024-11-01 00:25:52,358] [pool-1-thread-9] Initializing /data/stefan/001_q17.txt:
[testng]
[testng] ===============================================
[testng] Bio-Formats software test suite
[testng] Total tests run: 954, Failures: 0, Skips: 0
[testng] ===============================================
[testng]
BUILD SUCCESSFUL
Total time: 2 minutes 0 seconds
Finished: SUCCESS