Started by upstream project "BIOFORMATS-test-repo" build number 242
originally caused by:
Started by upstream project "Trigger" build number 267
originally caused by:
Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@7
[BIOFORMATS-test-folder@7] $ /bin/bash -xe /tmp/jenkins11603806190540624858.sh
+ '[' sxm = slidebook ']'
++ date +%u
+ '[' 6 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_38093_merge_ci -v /uod/idr/repos/curated/sxm:/data -v /uod/idr-scratch/merge-ci/curated/sxm:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
[echo] isSnapshot = true
init-title:
[echo] ----------=========== bio-formats-testing-framework ===========----------
init-timestamp:
init:
copy-resources:
compile:
[resolver:resolve] Resolving artifacts
compile-tests:
[resolver:resolve] Resolving artifacts
[javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
[javac] warning: [options] bootstrap class path not set in conjunction with -source 8
[javac] 1 warning
test-automated:
[testng] WARNING: An illegal reflective access operation has occurred
[testng] WARNING: Illegal reflective access by org.kohsuke.file_leak_detector.Listener (file:/home/build/.m2/repository/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar) to field java.net.SocketImpl.socket
[testng] WARNING: Please consider reporting this to the maintainers of org.kohsuke.file_leak_detector.Listener
[testng] WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations
[testng] WARNING: All illegal access operations will be denied in a future release
[testng] File leak detector installed
[testng] 01:48:43,460 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
[testng] 01:48:43,461 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - No custom configurators were discovered as a service.
[testng] 01:48:43,461 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 01:48:43,462 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 01:48:43,463 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
[testng] 01:48:43,463 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
[testng] 01:48:43,464 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 2 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
[testng] 01:48:43,464 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 01:48:43,464 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 01:48:43,465 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
[testng] 01:48:43,465 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
[testng] 01:48:43,465 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
[testng] 01:48:43,639 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
[testng] 01:48:43,639 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
[testng] 01:48:43,662 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
[testng] 01:48:43,662 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
[testng] 01:48:43,668 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
[testng] 01:48:43,668 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
[testng] 01:48:43,668 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
[testng] 01:48:43,669 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
[testng] 01:48:43,669 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@45099dd3 - End of configuration.
[testng] 01:48:43,670 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@60099951 - Registering current configuration as safe fallback point
[testng] 01:48:43,670 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 206 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
[testng] [2024-11-02 01:48:43,679] [main] java.version = 11.0.16
[testng] 01:48:43,682 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
[testng] 01:48:43,683 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:48:43,727 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-11-02_01-48-43.log]
[testng] 01:48:43,729 |-INFO in ch.qos.logback.core.sift.SiftProcessor@21be3395 - End of configuration.
[testng] [2024-11-02 01:48:43,731] [main] testng.directory = /data
[testng] [2024-11-02 01:48:43,732] [main] testng.configDirectory = /config
[testng] [2024-11-02 01:48:43,742] [main] testng.multiplier = 1.0
[testng] [2024-11-02 01:48:43,744] [main] testng.in-memory = false
[testng] [2024-11-02 01:48:43,744] [main] testng.allow-missing = false
[testng] [2024-11-02 01:48:43,744] [main] user.language = en
[testng] [2024-11-02 01:48:43,744] [main] user.country = ${user.country}
[testng] [2024-11-02 01:48:43,744] [main] Maximum heap size = 15360 MB
[testng] Scanning for files...
[testng] [2024-11-02 01:52:31,721] [main] ----------------------------------------
[testng] [2024-11-02 01:52:31,721] [main] Total files: 268
[testng] [2024-11-02 01:52:31,721] [main] Scan time: 227.977 s (850 ms/file)
[testng] [2024-11-02 01:52:31,721] [main] ----------------------------------------
[testng] Building list of tests...
[testng] Ready to test 160 files
[testng] [TestNG] Running:
[testng] Bio-Formats software test suite
[testng]
[testng] [2024-11-02 01:56:14,478] [pool-1-thread-1] Initializing /data/steve/JEOL/WinSem (Sue)/RICK1.IMG:
[testng] 01:56:14,478 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
[testng] 01:56:14,479 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:56:14,481 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-11-02_01-56-14.log]
[testng] 01:56:14,481 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5d17ba6 - End of configuration.
[testng] [2024-11-02 01:56:14,885] [pool-1-thread-12] Initializing /data/steve/Philips (Markus G)/135-33.IMG:
[testng] 01:56:14,885 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
[testng] 01:56:14,885 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:56:14,887 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-11-02_01-56-14.log]
[testng] 01:56:14,887 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6e43c550 - End of configuration.
[testng] [2024-11-02 01:56:15,127] [pool-1-thread-11] Initializing /data/steve/Misc SXM test images/Stacks/Fred's stack:
[testng] 01:56:15,127 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
[testng] 01:56:15,127 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:56:15,128 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-11-02_01-56-15.log]
[testng] 01:56:15,128 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3eeb5544 - End of configuration.
[testng] [2024-11-02 01:56:16,075] [pool-1-thread-10] Initializing /data/steve/TopoMetrix/Topo SFM (SC)/PA7.TFR:
[testng] 01:56:16,075 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
[testng] 01:56:16,075 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:56:16,076 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-11-02_01-56-16.log]
[testng] 01:56:16,076 |-INFO in ch.qos.logback.core.sift.SiftProcessor@753072a9 - End of configuration.
[testng] [2024-11-02 01:56:16,326] [pool-1-thread-9] Initializing /data/steve/Quesant Instr/Quesant v1.2 (Marc F)/afm3.afm:
[testng] 01:56:16,326 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
[testng] 01:56:16,326 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:56:16,326 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-11-02_01-56-16.log]
[testng] 01:56:16,327 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3ac6ae65 - End of configuration.
[testng] [2024-11-02 01:56:16,568] [pool-1-thread-8] Initializing /data/steve/TopoMetrix/Topo MFM (SC)/NDPOL-01.TFR:
[testng] 01:56:16,568 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
[testng] 01:56:16,568 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:56:16,569 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-11-02_01-56-16.log]
[testng] 01:56:16,569 |-INFO in ch.qos.logback.core.sift.SiftProcessor@573ffa8a - End of configuration.
[testng] [2024-11-02 01:56:16,829] [pool-1-thread-7] Initializing /data/steve/TIFF/CONCRETE TIFF:
[testng] 01:56:16,829 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
[testng] 01:56:16,829 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:56:16,830 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-11-02_01-56-16.log]
[testng] 01:56:16,830 |-INFO in ch.qos.logback.core.sift.SiftProcessor@8686a2f - End of configuration.
[testng] [2024-11-02 01:56:17,766] [pool-1-thread-6] Initializing /data/steve/Philips (Markus G)/135-31.IMG:
[testng] 01:56:17,767 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
[testng] 01:56:17,767 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:56:17,767 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-11-02_01-56-17.log]
[testng] 01:56:17,768 |-INFO in ch.qos.logback.core.sift.SiftProcessor@624de0bf - End of configuration.
[testng] [2024-11-02 01:56:17,996] [pool-1-thread-5] Initializing /data/steve/Quesant Instr/Quesant v1.2 (Marc F)/stm1.afm:
[testng] 01:56:17,996 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
[testng] 01:56:17,996 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:56:17,997 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-11-02_01-56-17.log]
[testng] 01:56:17,997 |-INFO in ch.qos.logback.core.sift.SiftProcessor@75fc7c2 - End of configuration.
[testng] [2024-11-02 01:56:18,253] [pool-1-thread-4] Initializing /data/steve/FITS/M13.fits:
[testng] 01:56:18,253 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
[testng] 01:56:18,253 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:56:18,254 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-11-02_01-56-18.log]
[testng] 01:56:18,254 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1483c1a3 - End of configuration.
[testng] [2024-11-02 01:56:18,336] [pool-1-thread-3] Initializing /data/steve/JEOL/SPM (Hiroyuki Isobe)/HOPG.tif:
[testng] 01:56:18,337 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
[testng] 01:56:18,337 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:56:18,337 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-11-02_01-56-18.log]
[testng] 01:56:18,338 |-INFO in ch.qos.logback.core.sift.SiftProcessor@39f49bb6 - End of configuration.
[testng] [2024-11-02 01:56:19,546] [pool-1-thread-2] Initializing /data/steve/TIFF/Macrophage cell images/T08-08 1600 24-bit.tif:
[testng] 01:56:19,546 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
[testng] 01:56:19,546 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:56:19,547 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-11-02_01-56-19.log]
[testng] 01:56:19,547 |-INFO in ch.qos.logback.core.sift.SiftProcessor@54496c6d - End of configuration.
[testng] [2024-11-02 01:56:23,021] [pool-1-thread-4] Initializing /data/steve/Zeiss LSM/Zeiss LSM (John S)/Zeiss LSM 2 samples:pixel/coltubfitc1.lsm:
[testng] [2024-11-02 01:56:24,541] [pool-1-thread-8] Initializing /data/steve/RHK Tech/RHK (Mark Flowers)/Demo04.sm2:
[testng] [2024-11-02 01:56:25,040] [pool-1-thread-9] Initializing /data/steve/TIFF/ta269 TIFF:
[testng] [2024-11-02 01:56:26,235] [pool-1-thread-5] Initializing /data/steve/JEOL/SPM (Hiroyuki Isobe)/990304j.tif:
[testng] [2024-11-02 01:56:27,249] [pool-1-thread-10] Initializing /data/steve/VG SAM (Karen)/BGND.DTI:
[testng] [2024-11-02 01:56:27,524] [pool-1-thread-6] Initializing /data/steve/Burleigh/Burleigh v2/Burleigh v2 (Phil W)/1_2h2_3.img:
[testng] [2024-11-02 01:56:28,491] [pool-1-thread-12] Initializing /data/steve/Zeiss LSM/Zeiss LSM (Ewald B)/FGD006.TIF:
[testng] [2024-11-02 01:56:32,877] [pool-1-thread-10] Initializing /data/steve/Gatan/Gatan Mac (Guy Mayor)/Digital Micrograph 2.5:
[testng] [2024-11-02 01:56:33,119] [pool-1-thread-8] Initializing /data/steve/JEOL/WinSem (Sue)/Shuttle tile ceramic/SHUTTLED.IMG:
[testng] [2024-11-02 01:56:33,738] [pool-1-thread-4] Initializing /data/steve/SM-Camera/W(110)+Fe,5nA,30min@110eV:
[testng] [2024-11-02 01:56:35,070] [pool-1-thread-3] Initializing /data/steve/TIFF/CD-ROM TIFF:
[testng] [2024-11-02 01:56:36,414] [pool-1-thread-1] Initializing /data/steve/Leica TCS (Keith B)/25_5BB.SXM:
[testng] [2024-11-02 01:56:37,540] [pool-1-thread-11] Initializing /data/steve/Gatan/Gatan (Sue D)/WOODLOUSE:
[testng] [2024-11-02 01:56:37,721] [pool-1-thread-7] Initializing /data/steve/Zeiss LSM/Zeiss LSM (John S)/Zeiss LSM 1 sample:pixel/ug6proj3.lsm:
[testng] [2024-11-02 01:56:38,228] [pool-1-thread-2] Initializing /data/steve/Targa/Test.TGA:
[testng] [2024-11-02 01:56:41,003] [pool-1-thread-11] Initializing /data/steve/RHK Tech/RHK (Bob Baker)/Examp_04.SM2:
[testng] [2024-11-02 01:56:41,542] [pool-1-thread-10] Initializing /data/steve/Philips (Markus G)/135-30.IMG:
[testng] [2024-11-02 01:56:42,350] [pool-1-thread-2] Initializing /data/steve/JEOL/WinSem (Sue)/TA.IMG:
[testng] [2024-11-02 01:56:43,006] [pool-1-thread-9] Initializing /data/steve/TopoMetrix/Topo MFM (SC)/NDR2-1.2FL:
[testng] [2024-11-02 01:56:43,414] [pool-1-thread-6] Initializing /data/steve/SBIG/M82 H 100s Tr=10s:
[testng] [2024-11-02 01:56:44,823] [pool-1-thread-5] Initializing /data/steve/Misc SXM test images/AVI movie/Clean Cu(110) LEED.avi:
[testng] [2024-11-02 01:56:45,070] [pool-1-thread-12] Initializing /data/steve/Gatan/Gatan TIFF/THE FLY 4 TIFF:
[testng] [2024-11-02 01:56:46,409] [pool-1-thread-7] Initializing /data/steve/Zeiss LSM/Zeiss LSM (John S)/Zeiss LSM 1 sample:pixel/ug6stack3.lsm:
[testng] [2024-11-02 01:56:48,788] [pool-1-thread-11] Initializing /data/steve/Gatan/Gatan (Sue D)/Honey Bee:
[testng] [2024-11-02 01:56:49,076] [pool-1-thread-10] Initializing /data/steve/JEOL/WinSem (Sue)/BALLS.IMG:
[testng] [2024-11-02 01:56:50,276] [pool-1-thread-8] Initializing /data/steve/JEOL/WinSem (Sue)/Shuttle tile ceramic/SHUTTLEC.IMG:
[testng] [2024-11-02 01:56:50,995] [pool-1-thread-5] Initializing /data/steve/Unisoku (Takashi)/Sample.HDR:
[testng] [2024-11-02 01:56:51,499] [pool-1-thread-3] Initializing /data/steve/Quesant Instr/Quesant v1.2 (Marc F)/afm2.afm:
[testng] [2024-11-02 01:56:51,867] [pool-1-thread-4] Initializing /data/steve/VG SAM (Karen)/PEAK.DTI:
[testng] [2024-11-02 01:56:52,235] [pool-1-thread-9] Initializing /data/steve/RHK Tech/RHK (Oliver Leifeld)/SM02_08.SM2:
[testng] [2024-11-02 01:56:52,711] [pool-1-thread-2] Initializing /data/steve/JEOL/SPM (Masashi N)/FFM204.TIF:
[testng] [2024-11-02 01:56:54,178] [pool-1-thread-7] Initializing /data/steve/Philips (Markus G)/302.TIF:
[testng] [2024-11-02 01:56:55,421] [pool-1-thread-1] Initializing /data/steve/Quesant Instr/Quesant v2.0 (Brad Taft)/03031004.afm:
[testng] [2024-11-02 01:56:56,824] [pool-1-thread-11] Initializing /data/steve/SBIG/M81 M 40s:
[testng] [2024-11-02 01:56:59,026] [pool-1-thread-4] Initializing /data/steve/Burleigh/Burleigh v2/Burleigh v2 (Phil W)/0_h4_3.img:
[testng] [2024-11-02 01:57:00,419] [pool-1-thread-3] Initializing /data/steve/RHK Tech/RHK (Mark Flowers)/Silicon.sm2:
[testng] [2024-11-02 01:57:00,867] [pool-1-thread-9] Initializing /data/steve/Gatan/Gatan (Sue D)/THE FLY A:
[testng] [2024-11-02 01:57:01,237] [pool-1-thread-12] Initializing /data/steve/Seiko Instr (Hwansoo)/05808001.xqd:
[testng] [2024-11-02 01:57:01,827] [pool-1-thread-10] Initializing /data/steve/TIFF/HAFF SEM:
[testng] [2024-11-02 01:57:03,258] [pool-1-thread-6] Initializing /data/steve/Bio-Rad (Nico Lindegger)/b.PIC:
[testng] [2024-11-02 01:57:04,192] [pool-1-thread-1] Initializing /data/steve/Misc SXM test images/Fake STM/Fake STM (4 rpts) TIFF:
[testng] [2024-11-02 01:57:06,088] [pool-1-thread-8] Initializing /data/steve/Zeiss LSM/Zeiss LSM (Ewald B)/NIALDIAN.TIF:
[testng] [2024-11-02 01:57:07,775] [pool-1-thread-9] Initializing /data/steve/Gatan/Gatan (Patrick Burton)/PDB_DARK_25k.dm2:
[testng] [2024-11-02 01:57:08,396] [pool-1-thread-12] Initializing /data/steve/RHK Tech/RHK (Bob Baker)/Examp_05.SM2:
[testng] [2024-11-02 01:57:08,820] [pool-1-thread-3] Initializing /data/steve/Burleigh/Burleigh v2/Graphite:
[testng] [2024-11-02 01:57:10,125] [pool-1-thread-2] Initializing /data/steve/FITS/M51.fits:
[testng] [2024-11-02 01:57:10,281] [pool-1-thread-7] Initializing /data/steve/JEOL/SPM (Hiroyuki Isobe)/990301c.tif:
[testng] [2024-11-02 01:57:11,778] [pool-1-thread-5] Initializing /data/steve/Misc SXM test images/Hough transform/Nathalie's test:
[testng] [2024-11-02 01:57:13,239] [pool-1-thread-11] Initializing /data/steve/Misc SXM test images/Stacks/DoF test stack (Ahnelt):
[testng] [2024-11-02 01:57:14,373] [pool-1-thread-4] Initializing /data/steve/Bio-Rad (Nico Lindegger)/a.PIC:
[testng] [2024-11-02 01:57:14,912] [pool-1-thread-6] Initializing /data/steve/Gatan/Gatan TIFF/Si CHIP TIFF:
[testng] [2024-11-02 01:57:16,745] [pool-1-thread-2] Initializing /data/steve/Oxford Instr (Yoshimasa)/80619a.top:
[testng] [2024-11-02 01:57:17,342] [pool-1-thread-1] Initializing /data/steve/TIFF/Macrophage cell images/RT1-f-24 1600 24-bit.tif:
[testng] [2024-11-02 01:57:19,256] [pool-1-thread-9] Initializing /data/steve/TIFF/Macrophage cell images/T48-44 800 24-bit.tif:
[testng] [2024-11-02 01:57:21,723] [pool-1-thread-12] Initializing /data/steve/JEOL/JSM (Inger Ekvell)/g11@0.IMG:
[testng] [2024-11-02 01:57:22,371] [pool-1-thread-8] Initializing /data/steve/RHK Tech/RHK (Bob Baker)/Examp_02.SM2:
[testng] [2024-11-02 01:57:22,872] [pool-1-thread-10] Initializing /data/steve/Gatan/Gatan PC (Eric Leroy)/Iron map 10.dm3:
[testng] [2024-11-02 01:57:23,125] [pool-1-thread-2] Initializing /data/steve/Molecular Imaging/Mol Imag v5.2 (Steve Higgins)/015.STP:
[testng] [2024-11-02 01:57:23,550] [pool-1-thread-4] Initializing /data/steve/Philips (Markus G)/135-32.IMG:
[testng] [2024-11-02 01:57:24,557] [pool-1-thread-3] Initializing /data/steve/Misc SXM test images/Chromosome images/HKGmaizeMei3.pict:
[testng] [2024-11-02 01:57:25,022] [pool-1-thread-7] Initializing /data/steve/TIFF/ta123 stack TIFF:
[testng] [2024-11-02 01:57:27,079] [pool-1-thread-10] Initializing /data/steve/Molecular Imaging/Mol Imag v4.18 (Reinat)/car-mac-con-g_003.STP:
[testng] [2024-11-02 01:57:27,774] [pool-1-thread-11] Initializing /data/steve/Gatan/Gatan PC (Eric Leroy)/BF super alliage.dm3:
[testng] [2024-11-02 01:57:28,502] [pool-1-thread-8] Initializing /data/steve/TIFF/Little owl TIFF:
[testng] [2024-11-02 01:57:30,447] [pool-1-thread-12] Initializing /data/steve/FITS/Meade DSI/M31bR1.fts:
[testng] [2024-11-02 01:57:30,663] [pool-1-thread-5] Initializing /data/steve/TopoMetrix/Topo STM v4 (Gabriella)/159HF02.ZFP:
[testng] [2024-11-02 01:57:31,216] [pool-1-thread-6] Initializing /data/steve/JEOL/SPM (Masashi N)/AFM204.TIF:
[testng] [2024-11-02 01:57:33,021] [pool-1-thread-3] Initializing /data/steve/Gatan/TEM (Larry Thomas)/TEM 10 KX:
[testng] [2024-11-02 01:57:33,435] [pool-1-thread-2] Initializing /data/steve/TopoMetrix/Topo STM v5 (Ewald B)/c80-50.zfr:
[testng] [2024-11-02 01:57:34,079] [pool-1-thread-4] Initializing /data/steve/Seiko Instr (Hwansoo)/05808001-2.xqd:
[testng] [2024-11-02 01:57:34,717] [pool-1-thread-9] Initializing /data/steve/Philips (Markus G)/302.IMG:
[testng] [2024-11-02 01:57:35,256] [pool-1-thread-1] Initializing /data/steve/Misc SXM test images/Fake STM/Fake STM (8 rpts) TIFF:
[testng] [2024-11-02 01:57:37,845] [pool-1-thread-11] Initializing /data/steve/Misc SXM test images/BMP images/m20_p.bmp:
[testng] [2024-11-02 01:57:38,020] [pool-1-thread-12] Initializing /data/steve/Misc SXM test images/Hough transform/Dale's bubbles:
[testng] [2024-11-02 01:57:39,915] [pool-1-thread-10] Initializing /data/steve/JPK Instr (Christian L)/Anti-reflex-coating.jpk:
[testng] [2024-11-02 01:57:41,978] [pool-1-thread-3] Initializing /data/steve/TopoMetrix/Topo STM v5 (Ewald B)/c80-50zfr.tif:
[testng] [2024-11-02 01:57:44,272] [pool-1-thread-5] Initializing /data/steve/Zeiss LSM/Zeiss LSM - 2 samp:pix (??)/16bcutagain.lsm:
[testng] [2024-11-02 01:57:45,300] [pool-1-thread-4] Initializing /data/steve/Burleigh/Burleigh v2/Burleigh v2 (Phil W)/0_h4_4.img:
[testng] [2024-11-02 01:57:47,171] [pool-1-thread-2] Initializing /data/steve/UBM (Rosset)/SG2.PR3:
[testng] [2024-11-02 01:57:47,695] [pool-1-thread-7] Initializing /data/steve/Gatan/Gatan (Patrick Burton)/PDB_DARK_25k.dm3:
[testng] [2024-11-02 01:57:47,990] [pool-1-thread-9] Initializing /data/steve/Gatan/Gatan (Sue D)/THE FLY 3:
[testng] [2024-11-02 01:57:48,399] [pool-1-thread-8] Initializing /data/steve/Quesant Instr/Quesant v1.2 (Marc F)/stm3.afm:
[testng] [2024-11-02 01:57:49,240] [pool-1-thread-11] Initializing /data/steve/TopoMetrix/Topo SFM (SC)/IM_P1.TFR:
[testng] [2024-11-02 01:57:49,914] [pool-1-thread-6] Initializing /data/steve/JEOL/SPM (Hiroyuki Isobe)/JEOL3.tif:
[testng] [2024-11-02 01:57:52,884] [pool-1-thread-7] Initializing /data/steve/TopoMetrix/Topo SFM (SC)/FFT test:
[testng] [2024-11-02 01:57:55,535] [pool-1-thread-9] Initializing /data/steve/Gatan/Gatan (Sue D)/SEM 500X (Larry):
[testng] [2024-11-02 01:57:55,877] [pool-1-thread-2] Initializing /data/steve/Hamamatsu (Keith B)/HIS-12bit-2b.HIS:
[testng] [2024-11-02 01:57:56,382] [pool-1-thread-10] Initializing /data/steve/Gatan/Gatan TIFF/BALL TIFF:
[testng] [2024-11-02 01:57:58,436] [pool-1-thread-8] Initializing /data/steve/Zeiss LSM/Zeiss LSM (John S)/Zeiss LSM 2 samples:pixel/coltubfitc1proj.lsm:
[testng] [2024-11-02 01:57:59,487] [pool-1-thread-1] Initializing /data/steve/RHK Tech/RHK (Bob Baker)/Examp_01.SM2:
[testng] [2024-11-02 01:58:00,053] [pool-1-thread-5] Initializing /data/steve/Gatan/Gatan PC (Eric Leroy)/Oxygen map 1.dm3:
[testng] [2024-11-02 01:58:00,360] [pool-1-thread-11] Initializing /data/steve/FITS/Meade DSI/M31bB1.fts:
[testng] [2024-11-02 01:58:00,516] [pool-1-thread-12] Initializing /data/steve/Quesant Instr/Quesant v2.0 (Hal E)/03-17-05A.afm:
[testng] [2024-11-02 01:58:01,127] [pool-1-thread-3] Initializing /data/steve/Oxford Instr (Yoshimasa)/98042103.TIF:
[testng] [2024-11-02 01:58:04,071] [pool-1-thread-4] Initializing /data/steve/Quesant Instr/Quesant v2.0 (Brad Taft)/03031020.afm:
[testng] [2024-11-02 01:58:04,873] [pool-1-thread-9] Initializing /data/steve/Quesant Instr/Quesant v2.0 (Hal E)/2-18-05A.afm:
[testng] [2024-11-02 01:58:05,942] [pool-1-thread-2] Initializing /data/steve/RHK Tech/RHK (Mark Flowers)/Demo07.sm2:
[testng] [2024-11-02 01:58:06,566] [pool-1-thread-11] Initializing /data/steve/FITS/Meade DSI/M31bG1.fts:
[testng] [2024-11-02 01:58:07,143] [pool-1-thread-5] Initializing /data/steve/JEOL/WinSem (Sue)/SIC2.IMG:
[testng] [2024-11-02 01:58:08,026] [pool-1-thread-6] Initializing /data/steve/Hamamatsu (Keith B)/HIS-12bit-3.HIS:
[testng] [2024-11-02 01:58:09,088] [pool-1-thread-7] Initializing /data/steve/TopoMetrix/Topo SFM (SC)/PA2.TFR:
[testng] [2024-11-02 01:58:09,733] [pool-1-thread-1] Initializing /data/steve/Molecular Imaging/Mol Imag v4.19 (Michael Z)/Wafer_vesicles_2min_010.STP:
[testng] [2024-11-02 01:58:10,308] [pool-1-thread-12] Initializing /data/steve/TIFF/Macrophage cell images/T24-24 1600 36_48-bit.tif:
[testng] [2024-11-02 01:58:12,227] [pool-1-thread-4] Initializing /data/steve/TopoMetrix/Topo STM v5 (Ewald B)/c80-50ffr.tif:
[testng] [2024-11-02 01:58:13,922] [pool-1-thread-8] Initializing /data/steve/RHK Tech/RHK-XPM Pro (Lydie L)/B70417000Q.SM3:
[testng] [2024-11-02 01:58:14,477] [pool-1-thread-11] Initializing /data/steve/TIFF/Macrophage cell images/Pre-d-0 1392 36-bit.tif:
[testng] [2024-11-02 01:58:15,328] [pool-1-thread-9] Initializing /data/steve/FITS/M104.fits:
[testng] [2024-11-02 01:58:15,468] [pool-1-thread-3] Initializing /data/steve/Misc SXM test images/Chromosome images/HKGmaizeMitose5.pict:
[testng] [2024-11-02 01:58:15,904] [pool-1-thread-10] Initializing /data/steve/RHK Tech/RHK (Bob Baker)/Examp_03.SM2:
[testng] [2024-11-02 01:58:17,978] [pool-1-thread-2] Initializing /data/steve/Hamamatsu (Keith B)/HIS-16bit-nopack.HIS:
[testng] [2024-11-02 01:58:18,943] [pool-1-thread-7] Initializing /data/steve/JEOL/WinSem (Sue)/Shuttle tile ceramic/SHUTTLEE.IMG:
[testng] [2024-11-02 01:58:19,820] [pool-1-thread-9] Initializing /data/steve/Quesant Instr/Quesant v1.2 (Marc F)/afm1.afm:
[testng] [2024-11-02 01:58:20,457] [pool-1-thread-6] Initializing /data/steve/Burleigh/Burleigh v1/Burleigh.IMG:
[testng] [2024-11-02 01:58:23,077] [pool-1-thread-3] Initializing /data/steve/Gatan/Gatan (Sue D)/THE FLY 2:
[testng] [2024-11-02 01:58:24,267] [pool-1-thread-8] Initializing /data/steve/JEOL/WinSem (Sue)/CONCRETE.IMG:
[testng] [2024-11-02 01:58:25,023] [pool-1-thread-1] Initializing /data/steve/SBIG/M81 H 250s Tr=5s:
[testng] [2024-11-02 01:58:26,824] [pool-1-thread-10] Initializing /data/steve/RHK Tech/RHK STS (Peter Sloan)/B50303AS.SM2:
[testng] [2024-11-02 01:58:27,291] [pool-1-thread-5] Initializing /data/steve/Hamamatsu (Keith B)/HIS-16bit-packed.HIS:
[testng] [2024-11-02 01:58:27,732] [pool-1-thread-2] Initializing /data/steve/JEOL/WinSem (Sue)/Shuttle tile ceramic/SHUTTLEB.IMG:
[testng] [2024-11-02 01:58:29,917] [pool-1-thread-4] Initializing /data/steve/RHK Tech/RHK-XPM Pro (Lydie L)/B70417000K.SM3:
[testng] [2024-11-02 01:58:30,903] [pool-1-thread-3] Initializing /data/steve/Gatan/Gatan Mac (Guy Mayor)/Digital Micrograph 3.4:
[testng] [2024-11-02 01:58:31,302] [pool-1-thread-9] Initializing /data/steve/Hamamatsu (Keith B)/HIS-12bit-1a.HIS:
[testng] [2024-11-02 01:58:32,003] [pool-1-thread-11] Initializing /data/steve/TIFF/Hough test TIFF:
[testng] [2024-11-02 01:58:35,049] [pool-1-thread-7] Initializing /data/steve/Misc SXM test images/Chromosome images/HRhuman1.pict:
[testng] [2024-11-02 01:58:35,595] [pool-1-thread-12] Initializing /data/steve/SM-Camera/Orhan + IPES rig:
[testng] [2024-11-02 01:58:37,734] [pool-1-thread-5] Initializing /data/steve/TIFF/8MAR03A.TIFF:
[testng] [2024-11-02 01:58:39,820] [pool-1-thread-10] Initializing /data/steve/Molecular Imaging/Mol Imag v4.18 (Reinat)/npc-liq-sharO_003.STP:
[testng] [2024-11-02 01:58:40,415] [pool-1-thread-6] Initializing /data/steve/Seiko Instr (Hwansoo)/05808002.xqf:
[testng] [2024-11-02 01:58:40,911] [pool-1-thread-3] Initializing /data/steve/JEOL/SEM (Steve Foulds)/IPS2000.DAT:
[testng] [2024-11-02 01:58:41,633] [pool-1-thread-4] Initializing /data/steve/Gatan/Gatan (Sue D)/THE FLY:
[testng] [2024-11-02 01:58:43,884] [pool-1-thread-7] Initializing /data/steve/Molecular Imaging/Mol Imag v5.2 (Steve Higgins)/014.STP:
[testng] [2024-11-02 01:58:44,500] [pool-1-thread-2] Initializing /data/steve/RHK Tech/RHK STS (Peter Sloan)/SloanSpec.SM2:
[testng] [2024-11-02 01:58:45,178] [pool-1-thread-8] Initializing /data/steve/Hamamatsu (Keith B)/HIS-8bit.HIS:
[testng] [2024-11-02 01:58:45,709] [pool-1-thread-9] Initializing /data/steve/RHK Tech/RHK IV (Koji N)/02042603.sm2:
[testng] [2024-11-02 01:58:47,286] [pool-1-thread-4] Initializing /data/steve/Leica TCS (Keith B)/25_5BJ.SXM:
[testng] [2024-11-02 01:58:48,722] [pool-1-thread-1] Initializing /data/steve/Misc SXM test images/Chromosome images/Chironomus2.pict:
[testng] [2024-11-02 01:58:49,300] [pool-1-thread-10] Initializing /data/steve/JEOL/WinSem (Sue)/Shuttle tile ceramic/SHUTTLEA.IMG:
[testng] [2024-11-02 01:58:50,126] [pool-1-thread-6] Initializing /data/steve/Seiko Instr (Hwansoo)/05808001-3.xqd:
[testng] [2024-11-02 01:58:50,737] [pool-1-thread-11] Initializing /data/steve/TopoMetrix/Topo STM (Liam McD)/GRID1.TFR:
[testng] [2024-11-02 01:58:51,375] [pool-1-thread-3] Initializing /data/steve/Molecular Imaging/Mol Imag v5.0 (Lionel S)/Cu#18-NaOH-035.STP:
[testng] [2024-11-02 01:58:52,029] [pool-1-thread-7] Initializing /data/steve/Oxford Instr (Yoshimasa)/98042103.top:
[testng] [2024-11-02 01:58:53,235] [pool-1-thread-12] Initializing /data/steve/Quesant Instr/Quesant v1.2 (Marc F)/stm2.afm:
[testng] [2024-11-02 01:58:54,412] [pool-1-thread-5] Initializing /data/steve/JPK Instr (Christian L)/Virus.jpk:
[testng] [2024-11-02 01:58:55,490] [pool-1-thread-2] Initializing /data/steve/TIFF/Macrophage cell images/D1-A-1 1392 36-bit.tif:
[testng] [2024-11-02 01:58:56,416] [pool-1-thread-9] Initializing /data/steve/JPK Instr (Christian L)/Titanium-implant.jpk:
[testng] [2024-11-02 01:58:57,403] [pool-1-thread-8] Initializing /data/steve/TopoMetrix/Topo STM v5 (Ewald B)/c80-50.ffr:
[testng] [2024-11-02 01:58:58,005] [pool-1-thread-1] Initializing /data/steve/Molecular Imaging/Mol Imag v4.18 (Reinat)/TwoDots.STP:
[testng] [2024-11-02 01:58:59,993] [pool-1-thread-7] Initializing /data/steve/RHK Tech/RHK (Bob Baker)/SCREEN1.PICT:
[testng]
[testng] ===============================================
[testng] Bio-Formats software test suite
[testng] Total tests run: 8480, Failures: 0, Skips: 0
[testng] ===============================================
[testng]
BUILD SUCCESSFUL
Total time: 10 minutes 24 seconds
Finished: SUCCESS