Started by upstream project "BIOFORMATS-test-repo" build number 243
originally caused by:
Started by user devspace
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@4
[BIOFORMATS-test-folder@4] $ /bin/bash -xe /tmp/jenkins17549461275417039097.sh
+ '[' olympus-oir = slidebook ']'
++ date +%u
+ '[' 6 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_38179_merge_ci -v /uod/idr/repos/curated/olympus-oir:/data -v /uod/idr-scratch/merge-ci/curated/olympus-oir:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
[echo] isSnapshot = true
init-title:
[echo] ----------=========== bio-formats-testing-framework ===========----------
init-timestamp:
init:
copy-resources:
compile:
[resolver:resolve] Resolving artifacts
compile-tests:
[resolver:resolve] Resolving artifacts
[javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
[javac] warning: [options] bootstrap class path not set in conjunction with -source 8
[javac] 1 warning
test-automated:
[testng] WARNING: An illegal reflective access operation has occurred
[testng] WARNING: Illegal reflective access by org.kohsuke.file_leak_detector.Listener (file:/home/build/.m2/repository/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar) to field java.net.SocketImpl.socket
[testng] WARNING: Please consider reporting this to the maintainers of org.kohsuke.file_leak_detector.Listener
[testng] WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations
[testng] WARNING: All illegal access operations will be denied in a future release
[testng] File leak detector installed
[testng] 14:00:02,336 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
[testng] 14:00:02,338 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - No custom configurators were discovered as a service.
[testng] 14:00:02,338 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 14:00:02,339 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 14:00:02,339 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
[testng] 14:00:02,340 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
[testng] 14:00:02,340 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
[testng] 14:00:02,340 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 14:00:02,341 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 14:00:02,341 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
[testng] 14:00:02,341 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
[testng] 14:00:02,342 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
[testng] 14:00:02,522 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
[testng] 14:00:02,522 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
[testng] 14:00:02,545 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
[testng] 14:00:02,545 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
[testng] 14:00:02,552 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
[testng] 14:00:02,552 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
[testng] 14:00:02,552 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
[testng] 14:00:02,552 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
[testng] 14:00:02,552 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@45099dd3 - End of configuration.
[testng] 14:00:02,553 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@60099951 - Registering current configuration as safe fallback point
[testng] 14:00:02,553 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 212 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
[testng] [2024-11-02 14:00:02,562] [main] java.version = 11.0.16
[testng] 14:00:02,565 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
[testng] 14:00:02,565 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 14:00:02,612 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-11-02_14-00-02.log]
[testng] 14:00:02,614 |-INFO in ch.qos.logback.core.sift.SiftProcessor@21be3395 - End of configuration.
[testng] [2024-11-02 14:00:02,616] [main] testng.directory = /data
[testng] [2024-11-02 14:00:02,616] [main] testng.configDirectory = /config
[testng] [2024-11-02 14:00:02,627] [main] testng.multiplier = 1.0
[testng] [2024-11-02 14:00:02,628] [main] testng.in-memory = false
[testng] [2024-11-02 14:00:02,629] [main] testng.allow-missing = false
[testng] [2024-11-02 14:00:02,629] [main] user.language = en
[testng] [2024-11-02 14:00:02,629] [main] user.country = ${user.country}
[testng] [2024-11-02 14:00:02,629] [main] Maximum heap size = 15360 MB
[testng] Scanning for files...
[testng] [2024-11-02 14:00:24,355] [main] ----------------------------------------
[testng] [2024-11-02 14:00:24,355] [main] Total files: 315
[testng] [2024-11-02 14:00:24,355] [main] Scan time: 21.726 s (68 ms/file)
[testng] [2024-11-02 14:00:24,355] [main] ----------------------------------------
[testng] Building list of tests...
[testng] Ready to test 192 files
[testng] [TestNG] Running:
[testng] Bio-Formats software test suite
[testng]
[testng] [2024-11-02 14:11:20,457] [pool-1-thread-1] Initializing /data/olympus/calcium sparks_XYt.oir:
[testng] 14:11:20,458 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
[testng] 14:11:20,459 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 14:11:20,461 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-11-02_14-11-20.log]
[testng] 14:11:20,461 |-INFO in ch.qos.logback.core.sift.SiftProcessor@45910fd9 - End of configuration.
[testng] [2024-11-02 14:11:21,259] [pool-1-thread-12] Initializing /data/olympus/not_opening_in_ImageJ/Image_0064/Image_0064_0001.ome.tif:
[testng] 14:11:21,259 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
[testng] 14:11:21,259 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 14:11:21,260 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-11-02_14-11-21.log]
[testng] 14:11:21,260 |-INFO in ch.qos.logback.core.sift.SiftProcessor@141bfae8 - End of configuration.
[testng] [2024-11-02 14:11:21,617] [pool-1-thread-11] Initializing /data/qa-21508/Stitch_A01_G008.oir:
[testng] 14:11:21,618 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
[testng] 14:11:21,618 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 14:11:21,618 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-11-02_14-11-21.log]
[testng] 14:11:21,619 |-INFO in ch.qos.logback.core.sift.SiftProcessor@38ebd88b - End of configuration.
[testng] [2024-11-02 14:11:21,847] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0050/Image_0050_0001.ome.tif:
[testng] 14:11:21,848 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
[testng] 14:11:21,848 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 14:11:21,849 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-11-02_14-11-21.log]
[testng] 14:11:21,849 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2d90a55b - End of configuration.
[testng] [2024-11-02 14:11:22,182] [pool-1-thread-9] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001_5ADVMLE.oir.vsi:
[testng] 14:11:22,182 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
[testng] 14:11:22,183 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 14:11:22,183 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-11-02_14-11-22.log]
[testng] 14:11:22,183 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3471bca7 - End of configuration.
[testng] [2024-11-02 14:11:22,369] [pool-1-thread-8] Initializing /data/public/etienne/venus stack.ome.tif:
[testng] 14:11:22,370 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
[testng] 14:11:22,370 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 14:11:22,371 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-11-02_14-11-22.log]
[testng] 14:11:22,371 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5bccbe7 - End of configuration.
[testng] [2024-11-02 14:11:22,696] [pool-1-thread-7] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x_0002.tif:
[testng] 14:11:22,697 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
[testng] 14:11:22,697 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 14:11:22,697 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-11-02_14-11-22.log]
[testng] 14:11:22,698 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4784ae98 - End of configuration.
[testng] [2024-11-02 14:11:23,164] [pool-1-thread-6] Initializing /data/qa-17335/Clipboard-OSR-Z.tif:
[testng] 14:11:23,164 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
[testng] 14:11:23,164 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 14:11:23,165 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-11-02_14-11-23.log]
[testng] 14:11:23,165 |-INFO in ch.qos.logback.core.sift.SiftProcessor@23506dba - End of configuration.
[testng] [2024-11-02 14:11:23,608] [pool-1-thread-5] Initializing /data/olympus/2021-04-20/20x_MATL_Cycle/Stitch_A01_G001.oir:
[testng] 14:11:23,608 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
[testng] 14:11:23,608 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 14:11:23,610 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-11-02_14-11-23.log]
[testng] 14:11:23,610 |-INFO in ch.qos.logback.core.sift.SiftProcessor@21f6d3f3 - End of configuration.
[testng] [2024-11-02 14:11:23,843] [pool-1-thread-4] Initializing /data/qa-16871/XY_0003.ome.tif:
[testng] 14:11:23,844 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
[testng] 14:11:23,844 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 14:11:23,844 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-11-02_14-11-23.log]
[testng] 14:11:23,845 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7e106fa1 - End of configuration.
[testng] [2024-11-02 14:11:24,288] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0091/Clipboard-Image_0091_0001.tif:
[testng] 14:11:24,288 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
[testng] 14:11:24,288 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 14:11:24,289 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-11-02_14-11-24.log]
[testng] 14:11:24,289 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2d357e6c - End of configuration.
[testng] [2024-11-02 14:11:24,694] [pool-1-thread-2] Initializing /data/qa-17270/image1.oir:
[testng] 14:11:24,695 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
[testng] 14:11:24,695 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 14:11:24,696 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-11-02_14-11-24.log]
[testng] 14:11:24,696 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3e964d12 - End of configuration.
[testng] [2024-11-02 14:11:29,930] [pool-1-thread-9] Initializing /data/qa-16881/P10-50 D2_0019.ome.tif:
[testng] [2024-11-02 14:11:30,822] [pool-1-thread-12] Initializing /data/qa-17409/Stitch_A01_G001-exported.ome.tif:
[testng] [2024-11-02 14:11:31,544] [pool-1-thread-4] Initializing /data/olympus/40X_4CH_XY.oir:
[testng] [2024-11-02 14:11:31,915] [pool-1-thread-10] Initializing /data/olympus/Clipboard-stitched 4x4 zstack 10X_XYZ.tif:
[testng] [2024-11-02 14:11:32,661] [pool-1-thread-8] Initializing /data/olympus/2021-04-20/20x_MATL_Cycle/matl.omp2info:
[testng] [2024-11-02 14:11:36,652] [pool-1-thread-6] Initializing /data/qa-17335/Clipboard-stimulation_0001_LSM.tif:
[testng] [2024-11-02 14:11:37,178] [pool-1-thread-3] Initializing /data/olympus/2021-07-19/2021-07-19 15_37_09-Original Metadata - FRAP_0006_LSM.oir.png:
[testng] [2024-11-02 14:11:37,208] [pool-1-thread-7] Initializing /data/qa-16881/W1-135 D6 New 20150818_0010.oir:
[testng] [2024-11-02 14:11:38,715] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Clipboard-Image_0001_0001.tif:
[testng] [2024-11-02 14:11:40,887] [pool-1-thread-1] Initializing /data/olympus/2021-03-23/Dataset02_incl_stitched_image/matl.omp2info:
[testng] [2024-11-02 14:11:44,633] [pool-1-thread-9] Initializing /data/olympus/2017-04-20/mito_0006_0001.oir:
[testng] [2024-11-02 14:11:46,532] [pool-1-thread-10] Initializing /data/public/etienne/coupe shg stack_0001.oir:
[testng] [2024-11-02 14:11:47,424] [pool-1-thread-6] Initializing /data/olympus/2017-04-21/SampleImagesWS/LILY POLLEN.oir:
[testng] [2024-11-02 14:11:48,207] [pool-1-thread-7] Initializing /data/public/gh-4205/zenodo-12773657/DAPI-mCherry_3T_4Z_5Lambda-420-630-w10nm-s50nm.oir:
[testng] [2024-11-02 14:11:49,292] [pool-1-thread-3] Initializing /data/qa-17409/Clipboard.tif:
[testng] [2024-11-02 14:11:49,810] [pool-1-thread-12] Initializing /data/qa-21577/R13L-S2-5_X20_ZOOM1_Z_CONTROL.oir:
[testng] [2024-11-02 14:11:50,650] [pool-1-thread-9] Initializing /data/olympus/2017-04-21/SampleImagesWS/CagedATP CaG10.oir:
[testng] [2024-11-02 14:11:51,102] [pool-1-thread-5] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002_5ADVMLE.oir.vsi:
[testng] [2024-11-02 14:11:53,773] [pool-1-thread-10] Initializing /data/qa-16881/Clipboard-P10-50 D2_0019.tif:
[testng] [2024-11-02 14:11:54,577] [pool-1-thread-5] Initializing /data/qa-17293/Clipboard.tif:
[testng] [2024-11-02 14:11:55,470] [pool-1-thread-3] Initializing /data/olympus/2017-04-21/Clipboard.tif:
[testng] [2024-11-02 14:11:56,014] [pool-1-thread-6] Initializing /data/olympus/2017-04-21/SampleImagesWS/PA-GFPv-2.oir:
[testng] [2024-11-02 14:11:57,376] [pool-1-thread-9] Initializing /data/olympus/2021-04-20/overview 2 x_Cycle_01/matl.omp2info:
[testng] [2024-11-02 14:11:59,686] [pool-1-thread-10] Initializing /data/olympus/XYZt.oir:
[testng] [2024-11-02 14:12:01,469] [pool-1-thread-5] Initializing /data/olympus/XYZt.ome.tif:
[testng] [2024-11-02 14:12:03,033] [pool-1-thread-3] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002.oir:
[testng] [2024-11-02 14:12:03,563] [pool-1-thread-7] Initializing /data/olympus/not_opening_in_ImageJ/Image_0033/Image_0033_0001.oir:
[testng] [2024-11-02 14:12:05,085] [pool-1-thread-6] Initializing /data/olympus/stitched 4x4 zstack 10X_XYZ.ome.tif:
[testng] [2024-11-02 14:12:06,708] [pool-1-thread-11] Initializing /data/qa-16871/Clipboard.tif:
[testng] [2024-11-02 14:12:08,898] [pool-1-thread-5] Initializing /data/qa-17293/2-z-t_0001_LSM.ome.tif:
[testng] [2024-11-02 14:12:09,647] [pool-1-thread-7] Initializing /data/olympus/2017-04-21/SampleImagesWS/Caged Glu-3 point.oir:
[testng] [2024-11-02 14:12:13,102] [pool-1-thread-11] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Image_0055_0001.oir:
[testng] [2024-11-02 14:12:13,385] [pool-1-thread-5] Initializing /data/qa-16881/P10-50 D2.oir:
[testng] [2024-11-02 14:12:13,776] [pool-1-thread-6] Initializing /data/olympus/Stitched_XYZ.ome.tif:
[testng] [2024-11-02 14:12:16,325] [pool-1-thread-7] Initializing /data/qa-16881/P10D1 20150729_0019.ome.tif:
[testng] [2024-11-02 14:12:16,845] [pool-1-thread-10] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x.tif:
[testng] [2024-11-02 14:12:18,544] [pool-1-thread-11] Initializing /data/olympus/XYZt.vsi:
[testng] [2024-11-02 14:12:19,182] [pool-1-thread-4] Initializing /data/qa-16881/W11-180 D3 20151021_0024.ome.tif:
[testng] [2024-11-02 14:12:19,788] [pool-1-thread-5] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-PA-GFPv-2.tif:
[testng] [2024-11-02 14:12:20,236] [pool-1-thread-12] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001.ome.tif:
[testng] [2024-11-02 14:12:20,571] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0064/Clipboard-Image_0064_0001.tif:
[testng] [2024-11-02 14:12:22,545] [pool-1-thread-11] Initializing /data/qa-17922/example_multipart.oir:
[testng] [2024-11-02 14:12:48,577] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Clipboard-Image_0043_0001.tif:
[testng] [2024-11-02 14:12:49,542] [pool-1-thread-7] Initializing /data/olympus/not_opening_in_ImageJ/Image_0079/Clipboard-Image_0079_0001.tif:
[testng] [2024-11-02 14:12:50,675] [pool-1-thread-10] Initializing /data/qa-17917/f10010.oir:
[testng] [2024-11-02 14:13:22,096] [pool-1-thread-4] Initializing /data/qa-16881/Clipboard-W11-180 D3 20151021_0006.tif:
[testng] [2024-11-02 14:13:24,547] [pool-1-thread-5] Initializing /data/qa-16881/P10-50 D2_0006.ome.tif:
[testng] [2024-11-02 14:13:25,011] [pool-1-thread-9] Initializing /data/olympus/2017-04-21/SampleImagesWS/Caged Glu-3 point.ome.tif:
[testng] [2024-11-02 14:13:25,587] [pool-1-thread-12] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/image_Cycle_02.oir:
[testng] [2024-11-02 14:13:26,077] [pool-1-thread-6] Initializing /data/qa-17222/ps245 red tubulin green 60x_5ADVMLE-1.oir.vsi:
[testng] [2024-11-02 14:13:28,859] [pool-1-thread-7] Initializing /data/olympus/2017-04-21/zebra shg.oir:
[testng] [2024-11-02 14:13:30,723] [pool-1-thread-2] Initializing /data/qa-17222/ps245 red tubulin green 60x.ome.tif:
[testng] [2024-11-02 14:13:31,613] [pool-1-thread-4] Initializing /data/qa-18802/20171020_JupGFPHisRFP_L3_30xSI_galvo_p5z_p1xy_better_than_nyquist.oir:
[testng] [2024-11-02 14:13:32,841] [pool-1-thread-9] Initializing /data/qa-17335/OSR-Z.oir:
[testng] [2024-11-02 14:13:33,291] [pool-1-thread-5] Initializing /data/public/gh-4205/zenodo-12773657/DAPI_mCherry_4Z_5Lambda-420-630-w10nm-s50nm.oir:
[testng] [2024-11-02 14:13:33,702] [pool-1-thread-3] Initializing /data/qa-16881/Clipboard-W4-45 D5 New 20150816_0011.tif:
[testng] [2024-11-02 14:13:35,638] [pool-1-thread-6] Initializing /data/olympus/spectral_scan_XYL.oir:
[testng] [2024-11-02 14:13:38,166] [pool-1-thread-12] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Image_0099_0001.ome.tif:
[testng] [2024-11-02 14:13:39,585] [pool-1-thread-2] Initializing /data/qa-16881/P10D1 20150729_0019.oir:
[testng] [2024-11-02 14:13:39,985] [pool-1-thread-9] Initializing /data/olympus/Clipboard-XYZt.tif:
[testng] [2024-11-02 14:13:40,565] [pool-1-thread-3] Initializing /data/olympus/stitched 4x4 zstack 10X_XYZ.oir:
[testng] [2024-11-02 14:13:42,693] [pool-1-thread-12] Initializing /data/olympus/Clipboard-40X_4CH_XY.tif:
[testng] [2024-11-02 14:13:48,032] [pool-1-thread-2] Initializing /data/qa-16881/Clipboard-W4-0 D14 New 20150828_0007.tif:
[testng] [2024-11-02 14:13:49,897] [pool-1-thread-5] Initializing /data/qa-17270/Clipboard-image1.tif:
[testng] [2024-11-02 14:13:51,003] [pool-1-thread-9] Initializing /data/olympus/not_opening_in_ImageJ/Image_0058/Clipboard-Image_0058_0001.tif:
[testng] [2024-11-02 14:13:52,456] [pool-1-thread-3] Initializing /data/olympus/2021-03-23/Dataset02_incl_stitched_image/Stitch_A01_G001.oir:
[testng] [2024-11-02 14:13:54,572] [pool-1-thread-6] Initializing /data/olympus/_calcium sparks_XYt_/stack1/frame_t_0.ets:
[testng] [2024-11-02 14:13:56,279] [pool-1-thread-12] Initializing /data/qa-17270/Clipboard-alexa488.tif:
[testng] [2024-11-02 14:14:01,082] [pool-1-thread-2] Initializing /data/qa-16881/W11-180 D3 20151021_0006.oir:
[testng] [2024-11-02 14:14:01,541] [pool-1-thread-9] Initializing /data/qa-17270/stack1.ome.tif:
[testng] [2024-11-02 14:14:02,180] [pool-1-thread-5] Initializing /data/qa-16881/P10-50 D2.ome.tif:
[testng] [2024-11-02 14:14:02,732] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Clipboard-Image_0055_0001.tif:
[testng] [2024-11-02 14:14:05,009] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0079/Image_0079_0001.ome.tif:
[testng] [2024-11-02 14:14:07,865] [pool-1-thread-12] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002.ome.tif:
[testng] [2024-11-02 14:14:12,055] [pool-1-thread-5] Initializing /data/qa-16881/P10D1 20150729_0024.ome.tif:
[testng] [2024-11-02 14:14:13,174] [pool-1-thread-9] Initializing /data/qa-16881/P10D1 20150729_0024.oir:
[testng] [2024-11-02 14:14:13,815] [pool-1-thread-2] Initializing /data/qa-17335/1.ome.tif:
[testng] [2024-11-02 14:14:14,441] [pool-1-thread-3] Initializing /data/public/etienne/amy slice z stack_0001.ome.tif:
[testng] [2024-11-02 14:14:15,042] [pool-1-thread-6] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/Stitch_A01_G001_0001.oir:
[testng] [2024-11-02 14:14:18,744] [pool-1-thread-12] Initializing /data/qa-16881/W1-135 D6 New 20150818_0010.ome.tif:
[testng] [2024-11-02 14:14:21,223] [pool-1-thread-3] Initializing /data/gh-3779/10kDa.P19.ZDC.7xConcentrationAlexProtocol.HomogenizedDex.oir:
[testng] [2024-11-02 14:14:22,017] [pool-1-thread-5] Initializing /data/public/gh-4205/zenodo-12773657/DAPI_mCherry_4T_5Lambda-420-630-w10nm-s50nm.oir:
[testng] [2024-11-02 14:14:23,200] [pool-1-thread-9] Initializing /data/olympus/not_opening_in_ImageJ/Image_0091/Image_0091_0001.ome.tif:
[testng] [2024-11-02 14:14:24,670] [pool-1-thread-2] Initializing /data/qa-16881/W4-0 D14 New 20150828_0007.ome.tif:
[testng] [2024-11-02 14:14:26,796] [pool-1-thread-12] Initializing /data/olympus/2017-11-20/xytz_golgi/xytz_golgi.oir:
[testng] [2024-11-02 14:14:30,082] [pool-1-thread-6] Initializing /data/qa-16881/W11-180 D3 20151021_0024.oir:
[testng] [2024-11-02 14:14:32,252] [pool-1-thread-9] Initializing /data/qa-17270/Clipboard-stack1.tif:
[testng] [2024-11-02 14:14:35,459] [pool-1-thread-2] Initializing /data/olympus/2017-04-20/mito_0006_0001.ome.tif:
[testng] [2024-11-02 14:14:39,739] [pool-1-thread-6] Initializing /data/olympus/40X_4CH_XY.vsi:
[testng] [2024-11-02 14:14:41,369] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0033/Clipboard-Image_0033_0001.tif:
[testng] [2024-11-02 14:14:42,513] [pool-1-thread-9] Initializing /data/olympus/not_opening_in_ImageJ/Image_0050/Image_0050_0001.oir:
[testng] [2024-11-02 14:14:46,333] [pool-1-thread-6] Initializing /data/qa-17222/ps245 red tubulin green 60x-1.oir.vsi:
[testng] [2024-11-02 14:14:47,065] [pool-1-thread-5] Initializing /data/martin/20170824_JupGFP_HisRFP_wL3_30xSI_4xzoom_0p5z_A01_G001_0001.oir:
[testng] [2024-11-02 14:15:43,782] [pool-1-thread-12] Initializing /data/public/gh-4205/zenodo-12773657/DAPI_mCherry_22Lambda-420-630-w10nm-s10nm.oir:
[testng] [2024-11-02 14:15:47,383] [pool-1-thread-9] Initializing /data/qa-16881/Clipboard-P10D1 20150729_0024.tif:
[testng] [2024-11-02 14:15:48,836] [pool-1-thread-2] Initializing /data/public/etienne/Clipboard-amy slice z stack_0001.tif:
[testng] [2024-11-02 14:15:49,946] [pool-1-thread-6] Initializing /data/olympus/Stitched_XYZ.oir:
[testng] [2024-11-02 14:15:50,700] [pool-1-thread-3] Initializing /data/qa-16881/Clipboard-P10D1 20150729.tif:
[testng] [2024-11-02 14:15:56,938] [pool-1-thread-9] Initializing /data/qa-16881/P10D1 20150729.oir:
[testng] [2024-11-02 14:15:57,422] [pool-1-thread-2] Initializing /data/olympus/_stitched 4x4 zstack 10X_XYZ_/stack1/frame_t_0.ets:
[testng] [2024-11-02 14:15:57,951] [pool-1-thread-4] Initializing /data/qa-16881/P10D1 20150729.ome.tif:
[testng] [2024-11-02 14:15:58,887] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0058/Image_0058_0001.ome.tif:
[testng] [2024-11-02 14:15:59,795] [pool-1-thread-6] Initializing /data/qa-17331/Clipboard.tif:
[testng] [2024-11-02 14:16:05,896] [pool-1-thread-3] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/matl.omp2info:
[testng] [2024-11-02 14:16:09,720] [pool-1-thread-4] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Image_0043_0001.ome.tif:
[testng] [2024-11-02 14:16:10,245] [pool-1-thread-9] Initializing /data/public/etienne/amy slice z stack_0001.oir:
[testng] [2024-11-02 14:16:10,694] [pool-1-thread-6] Initializing /data/qa-17270/image1.ome.tif:
[testng] [2024-11-02 14:16:11,140] [pool-1-thread-2] Initializing /data/public/gh-4205/zenodo-13680725/Stitch_A01_G001.oir:
[testng] [2024-11-02 14:16:15,943] [pool-1-thread-4] Initializing /data/qa-16881/Clipboard-P10-50 D2.tif:
[testng] [2024-11-02 14:16:17,347] [pool-1-thread-12] Initializing /data/qa-17335/OSR-Z.ome.tif:
[testng] [2024-11-02 14:16:19,326] [pool-1-thread-9] Initializing /data/olympus/Stitched_XYZ.vsi:
[testng] [2024-11-02 14:16:19,963] [pool-1-thread-6] Initializing /data/olympus/spectral_scan_XYL.ome.tif:
[testng] [2024-11-02 14:16:23,699] [pool-1-thread-12] Initializing /data/olympus/not_opening_in_ImageJ/Image_0064/Image_0064_0001.oir:
[testng] [2024-11-02 14:16:24,335] [pool-1-thread-9] Initializing /data/qa-17270/alexa488.ome.tif:
[testng] [2024-11-02 14:16:24,864] [pool-1-thread-4] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Image_0001_0001.ome.tif:
[testng] [2024-11-02 14:16:25,323] [pool-1-thread-2] Initializing /data/qa-17335/stimulation_0001_LSM.ome.tif:
[testng] [2024-11-02 14:16:26,273] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0091/Image_0091_0001.oir:
[testng] [2024-11-02 14:16:29,374] [pool-1-thread-12] Initializing /data/qa-16881/P10-50 D2_0006.oir:
[testng] [2024-11-02 14:16:29,812] [pool-1-thread-4] Initializing /data/qa-17331/60x zstack RS.oir:
[testng] [2024-11-02 14:16:30,337] [pool-1-thread-2] Initializing /data/olympus/Clipboard-spectral_scan_XYL.tif:
[testng] [2024-11-02 14:16:31,602] [pool-1-thread-9] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-LILY POLLEN.tif:
[testng] [2024-11-02 14:16:35,359] [pool-1-thread-6] Initializing /data/public/etienne/venus stack.oir:
[testng] [2024-11-02 14:16:38,440] [pool-1-thread-2] Initializing /data/qa-16881/Clipboard-W11-180 D3 20151021_0024.tif:
[testng] [2024-11-02 14:16:39,144] [pool-1-thread-4] Initializing /data/qa-16881/W4-45 D5 New 20150816_0011.ome.tif:
[testng] [2024-11-02 14:16:39,511] [pool-1-thread-12] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Image_0043_0001.oir:
[testng] [2024-11-02 14:16:39,791] [pool-1-thread-9] Initializing /data/public/etienne/coupe shg stack_0001.ome.tif:
[testng] [2024-11-02 14:16:43,368] [pool-1-thread-4] Initializing /data/olympus/40X_4CH_XY.ome.tif:
[testng] [2024-11-02 14:16:43,784] [pool-1-thread-9] Initializing /data/olympus/not_opening_in_ImageJ/Image_0058/Image_0058_0001.oir:
[testng] [2024-11-02 14:16:44,137] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Image_0106_0001.ome.tif:
[testng] [2024-11-02 14:16:44,547] [pool-1-thread-12] Initializing /data/olympus/not_opening_in_ImageJ/Image_0079/Image_0079_0001.oir:
[testng] [2024-11-02 14:16:45,132] [pool-1-thread-2] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001.oir:
[testng] [2024-11-02 14:16:50,322] [pool-1-thread-9] Initializing /data/olympus/calcium sparks.jpg:
[testng] [2024-11-02 14:16:50,542] [pool-1-thread-12] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Image_0055_0001.ome.tif:
[testng] [2024-11-02 14:16:51,262] [pool-1-thread-6] Initializing /data/qa-17409/Stitch_A01_G001.oir:
[testng] [2024-11-02 14:16:52,048] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Clipboard-Image_0106_0001.tif:
[testng] [2024-11-02 14:16:52,771] [pool-1-thread-4] Initializing /data/qa-16881/W4-0 D14 New 20150828_0007.oir:
[testng] [2024-11-02 14:16:55,465] [pool-1-thread-9] Initializing /data/public/etienne/Clipboard-coupe shg stack_0001.tif:
[testng] [2024-11-02 14:16:56,055] [pool-1-thread-12] Initializing /data/qa-16881/W11-180 D3 20151021_0006.ome.tif:
[testng] [2024-11-02 14:16:58,520] [pool-1-thread-1] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-CagedATP Cag10.tif:
[testng] [2024-11-02 14:16:59,709] [pool-1-thread-4] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-Caged Glu-3 point.tif:
[testng] [2024-11-02 14:17:01,331] [pool-1-thread-6] Initializing /data/olympus/calcium sparks_XYt.ome.tif:
[testng] [2024-11-02 14:17:03,832] [pool-1-thread-12] Initializing /data/olympus/2017-04-21/SampleImagesWS/PA-GFPv-2.ome.tif:
[testng] [2024-11-02 14:17:04,993] [pool-1-thread-9] Initializing /data/olympus/2017-11-20/fish_overview/fish-overview-night.oir:
[testng] [2024-11-02 14:17:11,321] [pool-1-thread-1] Initializing /data/qa-17331/60x zstack RS.ome.tif:
[testng] [2024-11-02 14:17:12,135] [pool-1-thread-4] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Image_0099_0001.oir:
[testng] [2024-11-02 14:17:12,528] [pool-1-thread-6] Initializing /data/qa-16881/Clipboard-P10D1 20150729_0019.tif:
[testng] [2024-11-02 14:17:14,995] [pool-1-thread-12] Initializing /data/olympus/2017-04-21/SampleImagesWS/CagedATP CaG10.ome.tif:
[testng] [2024-11-02 14:17:17,287] [pool-1-thread-1] Initializing /data/olympus/2017-11-20/stimulation_exp/stimulation_exp.oir:
[testng] [2024-11-02 14:17:21,274] [pool-1-thread-7] Initializing /data/samples/channel-reorder/Stitched_XYZ-modified.oir:
[testng] [2024-11-02 14:17:22,177] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Image_0001_0001.oir:
[testng] [2024-11-02 14:17:22,516] [pool-1-thread-4] Initializing /data/qa-16881/Clipboard-P10-50 D2_0006.tif:
[testng] [2024-11-02 14:17:24,260] [pool-1-thread-12] Initializing /data/qa-17293/2-z-t_0001_LSM.oir:
[testng] [2024-11-02 14:17:25,775] [pool-1-thread-11] Initializing /data/olympus/2017-04-20/Clipboard.tif:
[testng] [2024-11-02 14:17:27,533] [pool-1-thread-2] Initializing /data/qa-17270/alexa488.oir:
[testng] [2024-11-02 14:17:29,120] [pool-1-thread-6] Initializing /data/qa-16881/Clipboard-W1-75 D11 New 20150825_0004.tif:
[testng] [2024-11-02 14:17:30,277] [pool-1-thread-7] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x_0001.tif:
[testng] [2024-11-02 14:17:31,158] [pool-1-thread-4] Initializing /data/public/gh-4205/zenodo-13680725/matl.omp2info:
[testng] [2024-11-02 14:17:40,010] [pool-1-thread-10] Initializing /data/olympus/2021-07-19/FRAP_0006_LSM.oir:
[testng] [2024-11-02 14:17:42,419] [pool-1-thread-11] Initializing /data/olympus/not_opening_in_ImageJ/Image_0050/Clipboard-Image_0050_0001.tif:
[testng] [2024-11-02 14:17:45,366] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Image_0106_0001.oir:
[testng] [2024-11-02 14:17:45,925] [pool-1-thread-12] Initializing /data/public/etienne/Clipboard-venus stack.tif:
[testng] [2024-11-02 14:17:46,867] [pool-1-thread-7] Initializing /data/qa-17270/stack1.oir:
[testng] [2024-11-02 14:17:50,123] [pool-1-thread-10] Initializing /data/qa-16881/W4-45 D5 New 20150816_0011.oir:
[testng] [2024-11-02 14:17:50,547] [pool-1-thread-11] Initializing /data/qa-16881/W1-75 D11 New 20150825_0004.ome.tif:
[testng] [2024-11-02 14:17:52,275] [pool-1-thread-6] Initializing /data/qa-16881/P10-50 D2_0019.oir:
[testng] [2024-11-02 14:17:53,696] [pool-1-thread-12] Initializing /data/qa-17335/Clipboard-1.tif:
[testng] [2024-11-02 14:17:55,892] [pool-1-thread-11] Initializing /data/cudmore/20190401__0005.oir:
[testng] [2024-11-02 14:18:01,867] [pool-1-thread-10] Initializing /data/olympus/Clipboard-calcium sparks_XYt.tif:
[testng] [2024-11-02 14:18:04,414] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0033/Image_0033_0001.ome.tif:
[testng] [2024-11-02 14:18:05,264] [pool-1-thread-12] Initializing /data/qa-16871/XY_0003.oir:
[testng] [2024-11-02 14:18:07,720] [pool-1-thread-6] Initializing /data/olympus/2017-04-21/SampleImagesWS/LILY POLLEN.ome.tif:
[testng] [2024-11-02 14:18:08,182] [pool-1-thread-10] Initializing /data/olympus/Clipboard-Stitched_XYZ.tif:
[testng] [2024-11-02 14:18:09,948] [pool-1-thread-1] Initializing /data/qa-17335/1.oir:
[testng] [2024-11-02 14:18:11,252] [pool-1-thread-7] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Clipboard-Image_0099_0001.tif:
[testng] [2024-11-02 14:18:13,125] [pool-1-thread-12] Initializing /data/qa-21577/R13L-S2-5_X20_ZOOM1_Z.oir:
[testng] [2024-11-02 14:18:14,888] [pool-1-thread-6] Initializing /data/qa-16881/W1-75 D11 New 20150825_0004.oir:
[testng] [2024-11-02 14:18:16,153] [pool-1-thread-1] Initializing /data/qa-17919/f10187.oir:
[testng] [2024-11-02 14:18:35,450] [pool-1-thread-10] Initializing /data/qa-16881/Clipboard-W1-135 D6 New 20150818_0010.tif:
[testng] [2024-11-02 14:18:36,354] [pool-1-thread-2] Initializing /data/qa-17222/ps245 red tubulin green 60x.oir:
[testng] [2024-11-02 14:18:37,451] [pool-1-thread-7] Initializing /data/qa-17335/stimulation_0001_LSM.oir:
[testng]
[testng] ===============================================
[testng] Bio-Formats software test suite
[testng] Total tests run: 10176, Failures: 0, Skips: 0
[testng] ===============================================
[testng]
BUILD SUCCESSFUL
Total time: 52 minutes 56 seconds
Finished: SUCCESS