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Started by upstream project "BIOFORMATS-test-repo" build number 243 originally caused by: Started by user devspace Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder [BIOFORMATS-test-folder] $ /bin/bash -xe /tmp/jenkins17057846704817999666.sh + '[' zeiss-tiff = slidebook ']' ++ date +%u + '[' 6 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_38297_merge_ci -v /uod/idr/repos/curated/zeiss-tiff:/data -v /uod/idr-scratch/merge-ci/curated/zeiss-tiff:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] 1 warning test-automated: [testng] WARNING: An illegal reflective access operation has occurred [testng] WARNING: Illegal reflective access by org.kohsuke.file_leak_detector.Listener (file:/home/build/.m2/repository/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar) to field java.net.SocketImpl.socket [testng] WARNING: Please consider reporting this to the maintainers of org.kohsuke.file_leak_detector.Listener [testng] WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations [testng] WARNING: All illegal access operations will be denied in a future release [testng] File leak detector installed [testng] 16:28:39,079 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 16:28:39,081 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - No custom configurators were discovered as a service. [testng] 16:28:39,081 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 16:28:39,082 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 16:28:39,083 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 16:28:39,083 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 16:28:39,084 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 2 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 16:28:39,084 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 16:28:39,084 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 16:28:39,085 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 16:28:39,085 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 16:28:39,085 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 16:28:39,257 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 16:28:39,257 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 16:28:39,280 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 16:28:39,280 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 16:28:39,286 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 16:28:39,286 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 16:28:39,286 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 16:28:39,287 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 16:28:39,287 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@45099dd3 - End of configuration. [testng] 16:28:39,287 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@60099951 - Registering current configuration as safe fallback point [testng] 16:28:39,288 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 204 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-11-02 16:28:39,297] [main] java.version = 11.0.16 [testng] 16:28:39,300 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 16:28:39,300 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 16:28:39,343 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-11-02_16-28-39.log] [testng] 16:28:39,345 |-INFO in ch.qos.logback.core.sift.SiftProcessor@21be3395 - End of configuration. [testng] [2024-11-02 16:28:39,347] [main] testng.directory = /data [testng] [2024-11-02 16:28:39,347] [main] testng.configDirectory = /config [testng] [2024-11-02 16:28:39,357] [main] testng.multiplier = 1.0 [testng] [2024-11-02 16:28:39,358] [main] testng.in-memory = false [testng] [2024-11-02 16:28:39,359] [main] testng.allow-missing = false [testng] [2024-11-02 16:28:39,359] [main] user.language = en [testng] [2024-11-02 16:28:39,359] [main] user.country = ${user.country} [testng] [2024-11-02 16:28:39,359] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2024-11-02 16:30:03,168] [main] ---------------------------------------- [testng] [2024-11-02 16:30:03,168] [main] Total files: 15735 [testng] [2024-11-02 16:30:03,169] [main] Scan time: 83.809 s (5 ms/file) [testng] [2024-11-02 16:30:03,169] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 125 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-11-02 16:32:26,686] [pool-1-thread-1] Initializing /data/qa-21570/250618_J1_diff_D3-2-0002.tif: [testng] 16:32:26,687 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 16:32:26,687 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 16:32:26,688 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-11-02_16-32-26.log] [testng] 16:32:26,689 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5eb952d2 - End of configuration. [testng] [2024-11-02 16:32:27,275] [pool-1-thread-12] Initializing /data/converted/jeffrey/750-30-03.tif: [testng] 16:32:27,276 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 16:32:27,276 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 16:32:27,276 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-11-02_16-32-27.log] [testng] 16:32:27,277 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6d909b53 - End of configuration. [testng] [2024-11-02 16:32:27,880] [pool-1-thread-11] Initializing /data/converted/shalin/ibidiuslide1-timelapse3_mid2.tif: [testng] 16:32:27,880 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 16:32:27,880 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 16:32:27,881 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-11-02_16-32-27.log] [testng] 16:32:27,881 |-INFO in ch.qos.logback.core.sift.SiftProcessor@597c7938 - End of configuration. [testng] [2024-11-02 16:32:28,650] [pool-1-thread-10] Initializing /data/converted/susan/BY4741NQ2.tif: [testng] 16:32:28,650 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 16:32:28,650 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 16:32:28,651 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-11-02_16-32-28.log] [testng] 16:32:28,651 |-INFO in ch.qos.logback.core.sift.SiftProcessor@620ca6fa - End of configuration. [testng] [2024-11-02 16:32:29,733] [pool-1-thread-9] Initializing /data/converted/rolf/example_1-2010_11_25.tif: [testng] 16:32:29,733 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 16:32:29,733 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 16:32:29,734 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-11-02_16-32-29.log] [testng] 16:32:29,734 |-INFO in ch.qos.logback.core.sift.SiftProcessor@25caec40 - End of configuration. [testng] [2024-11-02 16:32:30,771] [pool-1-thread-8] Initializing /data/converted/dietmar/137.tif: [testng] 16:32:30,771 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 16:32:30,772 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 16:32:30,772 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-11-02_16-32-30.log] [testng] 16:32:30,773 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7cd7b6a6 - End of configuration. [testng] [2024-11-02 16:32:31,684] [pool-1-thread-7] Initializing /data/converted/markus/Branchiostoma_6x12_MosaiX_Tiles_color.tif: [testng] 16:32:31,684 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 16:32:31,684 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 16:32:31,685 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-11-02_16-32-31.log] [testng] 16:32:31,685 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4902387b - End of configuration. [testng] [2024-11-02 16:32:32,582] [pool-1-thread-6] Initializing /data/converted/thomas/test_axiocam_3_1.tif: [testng] 16:32:32,582 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 16:32:32,582 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 16:32:32,583 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-11-02_16-32-32.log] [testng] 16:32:32,583 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1cbfa95c - End of configuration. [testng] [2024-11-02 16:32:33,144] [pool-1-thread-5] Initializing /data/converted/markus/PC12_neuroblastoma_Fura2_exp#9.tif: [testng] 16:32:33,144 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 16:32:33,144 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 16:32:33,144 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-11-02_16-32-33.log] [testng] 16:32:33,145 |-INFO in ch.qos.logback.core.sift.SiftProcessor@a3d0551 - End of configuration. [testng] [2024-11-02 16:32:34,137] [pool-1-thread-4] Initializing /data/converted/joseph/E-2009-0001a.tif: [testng] 16:32:34,137 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 16:32:34,137 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 16:32:34,137 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-11-02_16-32-34.log] [testng] 16:32:34,138 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5619e4c0 - End of configuration. [testng] [2024-11-02 16:32:35,449] [pool-1-thread-3] Initializing /data/converted/darren/section0002_w1.tif: [testng] 16:32:35,449 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 16:32:35,449 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 16:32:35,450 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-11-02_16-32-35.log] [testng] 16:32:35,450 |-INFO in ch.qos.logback.core.sift.SiftProcessor@da5387 - End of configuration. [testng] [2024-11-02 16:32:36,315] [pool-1-thread-2] Initializing /data/converted/markus/MosaiX_irregular_Z-stack_with_autofocus.tif: [testng] 16:32:36,315 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 16:32:36,315 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 16:32:36,315 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-11-02_16-32-36.log] [testng] 16:32:36,316 |-INFO in ch.qos.logback.core.sift.SiftProcessor@504c24b - End of configuration. [testng] [2024-11-02 16:32:53,804] [pool-1-thread-1] Initializing /data/converted/eirinn/pharm3-saline2-0147_11.tif: [testng] [2024-11-02 16:32:57,133] [pool-1-thread-9] Initializing /data/converted/dietmar/hmads-bac1-bac7-af488-rho-af647_pre-2006-03-30-0016.tif: [testng] [2024-11-02 16:32:58,158] [pool-1-thread-10] Initializing /data/converted/michel/d.tif: [testng] [2024-11-02 16:32:59,102] [pool-1-thread-3] Initializing /data/converted/strand/2Colors1Plane.tif: [testng] [2024-11-02 16:33:02,156] [pool-1-thread-6] Initializing /data/scott/Slide133-08.tif: [testng] [2024-11-02 16:33:03,382] [pool-1-thread-12] Initializing /data/converted/nicolas/image.tif: [testng] [2024-11-02 16:33:21,617] [pool-1-thread-12] Initializing /data/converted/markus/Confidence_ratio_image_PC12_neuroblastoma_Fura2_exp#9-2.tif: [testng] [2024-11-02 16:33:24,413] [pool-1-thread-10] Initializing /data/converted/markus/Material_color_image_HRc_microscanned_4x3K.tif: [testng] [2024-11-02 16:33:25,576] [pool-1-thread-6] Initializing /data/converted/converted/damian-compressed.tif: [testng] [2024-11-02 16:33:42,095] [pool-1-thread-3] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_9.tif: [testng] [2024-11-02 16:33:43,581] [pool-1-thread-6] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_1.tif: [testng] [2024-11-02 16:33:47,918] [pool-1-thread-10] Initializing /data/converted/sebastien/test.tif: [testng] [2024-11-02 16:34:58,683] [pool-1-thread-9] Initializing /data/scott/Slide133-04.tif: [testng] [2024-11-02 16:35:08,600] [pool-1-thread-11] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_12.tif: [testng] [2024-11-02 16:35:23,113] [pool-1-thread-9] Initializing /data/qa-21570/20150421_HepG2_yH2AX_DAPI_0.5h_5GyDOWN_1512_cell04_SIR_ALX.dv_comp.tif: [testng] [2024-11-02 16:35:29,767] [pool-1-thread-9] Initializing /data/converted/karsten/247096n3s3s9.tif: [testng] [2024-11-02 16:36:58,233] [pool-1-thread-9] Initializing /data/converted/joseph/BEST_EXAMPLE_LONGER_EXPOSURE.tif: [testng] [2024-11-02 16:37:22,947] [pool-1-thread-1] Initializing /data/converted/ville/MultiCh-RGB/pollen_rgb.tif: [testng] [2024-11-02 16:37:39,102] [pool-1-thread-7] Initializing /data/qa-21570/250618_J1_diff_D3-2-0004.tif: [testng] [2024-11-02 16:37:45,069] [pool-1-thread-8] Initializing /data/converted/rolf/example_2-2010_11_25.tif: [testng] [2024-11-02 16:37:46,252] [pool-1-thread-1] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_13.tif: [testng] [2024-11-02 16:37:50,673] [pool-1-thread-9] Initializing /data/converted/lior/live+cf5b.tif: [testng] [2024-11-02 16:37:57,375] [pool-1-thread-7] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_24.tif: [testng] [2024-11-02 16:38:07,982] [pool-1-thread-8] Initializing /data/converted/othmar/mozaic.tif: [testng] [2024-11-02 16:38:23,083] [pool-1-thread-9] Initializing /data/converted/kelsey/432x342BW.tif: [testng] [2024-11-02 16:38:27,855] [pool-1-thread-6] Initializing /data/converted/lior/live+cf2b.tif: [testng] [2024-11-02 16:38:39,537] [pool-1-thread-9] Initializing /data/converted/markus/HeLa-Reggie-GFP_ZT_fast-DCV-CI-measured-PSF.tif: [testng] [2024-11-02 16:38:52,059] [pool-1-thread-3] Initializing /data/converted/converted/wtzer_series76_z003_ch00.tif: [testng] [2024-11-02 16:39:01,133] [pool-1-thread-6] Initializing /data/converted/dan/zstack_convalaria.tif: [testng] [2024-11-02 16:39:08,141] [pool-1-thread-4] Initializing /data/othmar/mozaic.tif: [testng] [2024-11-02 16:39:09,257] [pool-1-thread-3] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_23.tif: [testng] [2024-11-02 16:39:12,291] [pool-1-thread-2] Initializing /data/converted/kelsey/650x514BW.tif: [testng] [2024-11-02 16:39:24,175] [pool-1-thread-6] Initializing /data/converted/monica/Monica_elegans_movie.tif: [testng] [2024-11-02 16:39:30,448] [pool-1-thread-2] Initializing /data/converted/markus/Mouse-newborn-panorama_JPEG_5percent_compressed.tif: [testng] [2024-11-02 16:39:31,616] [pool-1-thread-10] Initializing /data/converted/cecilia/day 1 naked nb positive 1-2007-0055.tif: [testng] [2024-11-02 16:39:55,195] [pool-1-thread-10] Initializing /data/converted/markus/Mouse-newborn-panorama.tif: [testng] [2024-11-02 16:40:02,278] [pool-1-thread-2] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_14.tif: [testng] [2024-11-02 16:40:16,920] [pool-1-thread-11] Initializing /data/converted/stephan/notok1.tif: [testng] [2024-11-02 16:40:30,317] [pool-1-thread-10] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_21.tif: [testng] [2024-11-02 16:40:50,310] [pool-1-thread-8] Initializing /data/converted/converted/mri-stack.tif: [testng] [2024-11-02 16:41:05,718] [pool-1-thread-8] Initializing /data/converted/sebastien/F1.tif: [testng] [2024-11-02 16:41:32,043] [pool-1-thread-11] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_2.tif: [testng] [2024-11-02 16:41:39,872] [pool-1-thread-4] Initializing /data/converted/markus/HighSpeedParas.tif: [testng] [2024-11-02 16:42:44,488] [pool-1-thread-1] Initializing /data/converted/michel/e.tif: [testng] [2024-11-02 16:43:19,936] [pool-1-thread-7] Initializing /data/converted/vladan/vladan.tif: [testng] [2024-11-02 16:43:27,321] [pool-1-thread-8] Initializing /data/converted/michel/b.tif: [testng] [2024-11-02 16:43:28,469] [pool-1-thread-1] Initializing /data/converted/dietmar/hmads-bac1-bac7-af488-rho-af647_pre-2006-03-30-ten.tif: [testng] [2024-11-02 16:43:58,049] [pool-1-thread-8] Initializing /data/converted/eirinn/demo-tile.tif: [testng] [2024-11-02 16:44:53,081] [pool-1-thread-8] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_3.tif: [testng] [2024-11-02 16:45:28,525] [pool-1-thread-3] Initializing /data/converted/karsten/Bild1.tif: [testng] [2024-11-02 16:46:18,277] [pool-1-thread-3] Initializing /data/converted/converted/deconvolve6_pseudo_tl000_zs000.tif: [testng] [2024-11-02 16:46:49,724] [pool-1-thread-3] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_22.tif: [testng] [2024-11-02 16:46:52,459] [pool-1-thread-2] Initializing /data/converted/jan/SampleStack_Mosaic4x5_comb.tif: [testng] [2024-11-02 16:47:30,798] [pool-1-thread-10] Initializing /data/converted/eirinn/11_10_2009-01-lcstim-15-10-09_position(1).tif: [testng] [2024-11-02 16:48:17,813] [pool-1-thread-12] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_18.tif: [testng] [2024-11-02 16:48:27,319] [pool-1-thread-1] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_25.tif: [testng] [2024-11-02 16:48:41,280] [pool-1-thread-11] Initializing /data/converted/dietmar/138.tif: [testng] [2024-11-02 16:49:55,070] [pool-1-thread-7] Initializing /data/converted/rachel/40K 30s A1.tif: [testng] [2024-11-02 16:50:25,814] [pool-1-thread-7] Initializing /data/scott/Slide133-11.tif: [testng] [2024-11-02 16:50:52,257] [pool-1-thread-7] Initializing /data/converted/darren/section0001_w1.tif: [testng] [2024-11-02 16:51:15,865] [pool-1-thread-10] Initializing /data/converted/jonas/10_0907_multidrug-0001_AB01_08.tif: [testng] [2024-11-02 16:51:21,813] [pool-1-thread-7] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast-widefield.tif: [testng] [2024-11-02 16:52:33,337] [pool-1-thread-8] Initializing /data/converted/markus/Brain_high_dynamic_range_imaging_Z-stack.tif: [testng] [2024-11-02 16:54:05,468] [pool-1-thread-3] Initializing /data/converted/michel/a.tif: [testng] [2024-11-02 16:54:23,950] [pool-1-thread-3] Initializing /data/converted/othmar/z-stack.tif: [testng] [2024-11-02 16:55:06,338] [pool-1-thread-11] Initializing /data/converted/dietmar/dapi-texasred-0015.tif: [testng] [2024-11-02 16:55:23,914] [pool-1-thread-12] Initializing /data/samples/mri-stack/mri-stack.tif: [testng] [2024-11-02 16:55:31,775] [pool-1-thread-8] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_11.tif: [testng] [2024-11-02 16:55:40,243] [pool-1-thread-1] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_5.tif: [testng] [2024-11-02 16:55:47,074] [pool-1-thread-12] Initializing /data/converted/eirinn/12_2_2009-16-hes5-brdu-proper_position(52).tif: [testng] [2024-11-02 16:59:28,469] [pool-1-thread-12] Initializing /data/converted/converted/damian.tif: [testng] [2024-11-02 16:59:47,943] [pool-1-thread-12] Initializing /data/converted/joseph/E-2009-0004.tif: [testng] [2024-11-02 17:00:23,123] [pool-1-thread-11] Initializing /data/converted/markus/Hypocampus_Tiles_with_stiching.tif: [testng] [2024-11-02 17:00:37,367] [pool-1-thread-7] Initializing /data/converted/converted/2chz.tif: [testng] [2024-11-02 17:01:38,818] [pool-1-thread-5] Initializing /data/converted/converted/wtzer_series76_z003_ch00-with-rois.tif: [testng] [2024-11-02 17:02:02,420] [pool-1-thread-9] Initializing /data/converted/eirinn/12_16_2009-01-tara-hd-triple-5to15_position(1)5.tif: [testng] [2024-11-02 17:02:06,669] [pool-1-thread-5] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_4.tif: [testng] [2024-11-02 17:02:42,163] [pool-1-thread-1] Initializing /data/converted/miso/Aufnahme-184058-0002.tif: [testng] [2024-11-02 17:02:50,102] [pool-1-thread-8] Initializing /data/qa-21570/250618_J1_diff_D3-2-0003.tif: [testng] [2024-11-02 17:03:10,395] [pool-1-thread-1] Initializing /data/converted/ville/MultiCh-RGB/pollen_bw.tif: [testng] [2024-11-02 17:03:12,360] [pool-1-thread-11] Initializing /data/converted/eirinn/5_6_2009-dj9-03_a01_01.tif: [testng] [2024-11-02 17:03:17,985] [pool-1-thread-8] Initializing /data/converted/dan/adultnr1.tif: [testng] [2024-11-02 17:03:48,254] [pool-1-thread-1] Initializing /data/converted/james/Sylvain_run3_1Gy_Live7-2008-0019.tif: [testng] [2024-11-02 17:04:00,549] [pool-1-thread-7] Initializing /data/converted/dietmar/hmads-24h-bac1-7-af647-af488-rho-1day-hyb-csk-2007-06-29-0008_position(113).tif: [testng] [2024-11-02 17:04:04,834] [pool-1-thread-11] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_8.tif: [testng] [2024-11-02 17:04:29,563] [pool-1-thread-8] Initializing /data/converted/converted/2chzt.tif: [testng] [2024-11-02 17:05:57,443] [pool-1-thread-1] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_10.tif: [testng] [2024-11-02 17:07:16,519] [pool-1-thread-10] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_15.tif: [testng] [2024-11-02 17:08:04,022] [pool-1-thread-9] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_19.tif: [testng] [2024-11-02 17:09:17,689] [pool-1-thread-12] Initializing /data/converted/markus/Long_TL_CElegans.tif: [testng] [2024-11-02 17:09:28,017] [pool-1-thread-3] Initializing /data/converted/dietmar/hmads-bac1-bac7-af488-rho-af647_pre-2006-03-30-six.tif: [testng] [2024-11-02 17:09:38,013] [pool-1-thread-5] Initializing /data/converted/michel/c.tif: [testng] [2024-11-02 17:10:15,884] [pool-1-thread-5] Initializing /data/converted/rachel/40K 30s A2.tif: [testng] [2024-11-02 17:10:50,203] [pool-1-thread-5] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_6.tif: [testng] [2024-11-02 17:11:07,317] [pool-1-thread-2] Initializing /data/converted/joseph/Alike_best_example_but_WORKS_FINE_maybe_cause_shorter_expose.tif: [testng] [2024-11-02 17:11:42,748] [pool-1-thread-7] Initializing /data/converted/markus/Smart_Experiment_4ch-T-time-stitched.tif: [testng] [2024-11-02 17:11:55,304] [pool-1-thread-11] Initializing /data/converted/karsten/Bild2.tif: [testng] [2024-11-02 17:12:30,862] [pool-1-thread-11] Initializing /data/scott/Slide133-01.tif: [testng] [2024-11-02 17:13:00,019] [pool-1-thread-11] Initializing /data/converted/joseph/E-2009_0022.tif: [testng] [2024-11-02 17:13:03,985] [pool-1-thread-2] Initializing /data/dorai/F_ZImage10_(X10)_C.tif: [testng] [2024-11-02 17:13:12,520] [pool-1-thread-1] Initializing /data/converted/markus/30channels_exposure-series.tif: [testng] [2024-11-02 17:13:36,483] [pool-1-thread-2] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast-sectioned.tif: [testng] [2024-11-02 17:13:48,733] [pool-1-thread-3] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast.tif: [testng] [2024-11-02 17:15:13,056] [pool-1-thread-10] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_16.tif: [testng] [2024-11-02 17:15:33,984] [pool-1-thread-1] Initializing /data/converted/markus/Mouse-newborn-panorama_lossless_compressed.tif: [testng] [2024-11-02 17:16:20,964] [pool-1-thread-1] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_17.tif: [testng] [2024-11-02 17:16:35,995] [pool-1-thread-9] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast-sidebyside.tif: [testng] [2024-11-02 17:18:14,970] [pool-1-thread-5] Initializing /data/converted/markus/6ch-Z-stack_deconvolved.tif: [testng] [2024-11-02 17:24:16,664] [pool-1-thread-11] Initializing /data/converted/david/snap-181518-0001.tif: [testng] [2024-11-02 17:24:20,874] [pool-1-thread-10] Initializing /data/converted/kelsey/1300x1030BW.tif: [testng] [2024-11-02 17:24:45,828] [pool-1-thread-10] Initializing /data/converted/markus/PhaseGFP-MosaiX-Timelapse_Tiles.tif: [testng] [2024-11-02 17:24:47,885] [pool-1-thread-11] Initializing /data/converted/jonas/10_0907_multidrug-0001_AB01_03.tif: [testng] [2024-11-02 17:25:22,315] [pool-1-thread-2] Initializing /data/converted/stephan/notok2.tif: [testng] 18:00:58,595 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 18:00:58,595 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 18:00:58,596 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-11-02_18-00-58.log] [testng] 18:00:58,597 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2d0ea3a9 - End of configuration. [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 6625, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 92 minutes 23 seconds Finished: SUCCESS