Started by upstream project "BIOFORMATS-test-repo" build number 244
originally caused by:
Started by upstream project "Trigger" build number 268
originally caused by:
Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@5
[BIOFORMATS-test-folder@5] $ /bin/bash -xe /tmp/jenkins9276697952995929890.sh
+ '[' lim = slidebook ']'
++ date +%u
+ '[' 7 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_38347_merge_ci -v /uod/idr/repos/curated/lim:/data -v /uod/idr-scratch/merge-ci/curated/lim:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
[echo] isSnapshot = true
init-title:
[echo] ----------=========== bio-formats-testing-framework ===========----------
init-timestamp:
init:
copy-resources:
compile:
[resolver:resolve] Resolving artifacts
compile-tests:
[resolver:resolve] Resolving artifacts
[javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
[javac] warning: [options] bootstrap class path not set in conjunction with -source 8
[javac] 1 warning
test-automated:
[testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket
[testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket
[testng] File leak detector installed
[testng] 00:22:18,383 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
[testng] 00:22:18,406 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
[testng] 00:22:18,427 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
[testng] 00:22:18,427 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
[testng] 00:22:18,432 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
[testng] 00:22:18,432 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
[testng] 00:22:18,432 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
[testng] 00:22:18,432 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
[testng] 00:22:18,432 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@5d534f5d - End of configuration.
[testng] 00:22:18,433 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@51c668e3 - Registering current configuration as safe fallback point
[testng] 00:22:18,433 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2e6a8155 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 425 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
[testng] [2024-11-03 00:22:18,443] [main] java.version = 17.0.2
[testng] 00:22:18,446 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
[testng] 00:22:18,446 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:22:18,485 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-11-03_00-22-18.log]
[testng] 00:22:18,487 |-INFO in ch.qos.logback.core.sift.SiftProcessor@798162bc - End of configuration.
[testng] [2024-11-03 00:22:18,489] [main] testng.directory = /data
[testng] [2024-11-03 00:22:18,489] [main] testng.configDirectory = /config
[testng] [2024-11-03 00:22:18,497] [main] testng.multiplier = 1.0
[testng] [2024-11-03 00:22:18,498] [main] testng.in-memory = false
[testng] [2024-11-03 00:22:18,498] [main] testng.allow-missing = false
[testng] [2024-11-03 00:22:18,498] [main] user.language = en
[testng] [2024-11-03 00:22:18,498] [main] user.country = ${user.country}
[testng] [2024-11-03 00:22:18,498] [main] Maximum heap size = 15360 MB
[testng] Scanning for files...
[testng] [2024-11-03 00:22:19,061] [main] ----------------------------------------
[testng] [2024-11-03 00:22:19,061] [main] Total files: 21
[testng] [2024-11-03 00:22:19,061] [main] Scan time: 0.563 s (26 ms/file)
[testng] [2024-11-03 00:22:19,062] [main] ----------------------------------------
[testng] Building list of tests...
[testng] Ready to test 20 files
[testng] [TestNG] Running:
[testng] Bio-Formats software test suite
[testng]
[testng] [2024-11-03 00:22:24,103] [pool-1-thread-1] Initializing /data/venu/Kontrolle0007.lim:
[testng] 00:22:24,104 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
[testng] 00:22:24,104 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:22:24,106 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-11-03_00-22-24.log]
[testng] 00:22:24,107 |-INFO in ch.qos.logback.core.sift.SiftProcessor@460a0a6f - End of configuration.
[testng] [2024-11-03 00:22:24,374] [pool-1-thread-12] Initializing /data/venu/Kontrolle0003.lim:
[testng] 00:22:24,374 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
[testng] 00:22:24,374 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:22:24,375 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-11-03_00-22-24.log]
[testng] 00:22:24,375 |-INFO in ch.qos.logback.core.sift.SiftProcessor@42518032 - End of configuration.
[testng] [2024-11-03 00:22:24,572] [pool-1-thread-11] Initializing /data/venu/Kontrolle0005.lim:
[testng] 00:22:24,573 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
[testng] 00:22:24,573 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:22:24,574 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-11-03_00-22-24.log]
[testng] 00:22:24,575 |-INFO in ch.qos.logback.core.sift.SiftProcessor@722e9eb6 - End of configuration.
[testng] [2024-11-03 00:22:24,785] [pool-1-thread-10] Initializing /data/venu/Kontrolle0012.lim:
[testng] 00:22:24,785 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
[testng] 00:22:24,785 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:22:24,786 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-11-03_00-22-24.log]
[testng] 00:22:24,786 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5014699 - End of configuration.
[testng] [2024-11-03 00:22:24,997] [pool-1-thread-9] Initializing /data/venu/Kontrolle0008.lim:
[testng] 00:22:24,997 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
[testng] 00:22:24,998 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:22:24,999 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-11-03_00-22-24.log]
[testng] 00:22:24,999 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1b0ab901 - End of configuration.
[testng] [2024-11-03 00:22:25,201] [pool-1-thread-8] Initializing /data/venu/Kontrolle0021.lim:
[testng] 00:22:25,201 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
[testng] 00:22:25,201 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:22:25,202 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-11-03_00-22-25.log]
[testng] 00:22:25,202 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5cf1ffcb - End of configuration.
[testng] [2024-11-03 00:22:25,409] [pool-1-thread-7] Initializing /data/venu/Kontrolle0010.lim:
[testng] 00:22:25,409 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
[testng] 00:22:25,409 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:22:25,410 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-11-03_00-22-25.log]
[testng] 00:22:25,411 |-INFO in ch.qos.logback.core.sift.SiftProcessor@70c3f091 - End of configuration.
[testng] [2024-11-03 00:22:25,601] [pool-1-thread-6] Initializing /data/venu/Kontrolle0016.lim:
[testng] 00:22:25,601 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
[testng] 00:22:25,601 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:22:25,602 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-11-03_00-22-25.log]
[testng] 00:22:25,602 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5c8d263e - End of configuration.
[testng] [2024-11-03 00:22:25,810] [pool-1-thread-5] Initializing /data/venu/Kontrolle0017.lim:
[testng] 00:22:25,810 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
[testng] 00:22:25,811 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:22:25,811 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-11-03_00-22-25.log]
[testng] 00:22:25,812 |-INFO in ch.qos.logback.core.sift.SiftProcessor@66123dd0 - End of configuration.
[testng] [2024-11-03 00:22:26,013] [pool-1-thread-4] Initializing /data/venu/Kontrolle0009.lim:
[testng] 00:22:26,013 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
[testng] 00:22:26,014 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:22:26,014 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-11-03_00-22-26.log]
[testng] 00:22:26,014 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6f51bdec - End of configuration.
[testng] [2024-11-03 00:22:26,233] [pool-1-thread-3] Initializing /data/venu/Kontrolle0014.lim:
[testng] 00:22:26,233 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
[testng] 00:22:26,233 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:22:26,234 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-11-03_00-22-26.log]
[testng] 00:22:26,234 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4b62e28d - End of configuration.
[testng] [2024-11-03 00:22:26,436] [pool-1-thread-2] Initializing /data/venu/Kontrolle0001.lim:
[testng] 00:22:26,436 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
[testng] 00:22:26,436 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:22:26,436 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-11-03_00-22-26.log]
[testng] 00:22:26,437 |-INFO in ch.qos.logback.core.sift.SiftProcessor@284f671b - End of configuration.
[testng] [2024-11-03 00:22:32,070] [pool-1-thread-8] Initializing /data/venu/Kontrolle0004.lim:
[testng] [2024-11-03 00:22:32,266] [pool-1-thread-9] Initializing /data/venu/Kontrolle0015.lim:
[testng] [2024-11-03 00:22:32,455] [pool-1-thread-5] Initializing /data/venu/Kontrolle0020.lim:
[testng] [2024-11-03 00:22:32,640] [pool-1-thread-12] Initializing /data/venu/Kontrolle0013.lim:
[testng] [2024-11-03 00:22:32,843] [pool-1-thread-2] Initializing /data/venu/Kontrolle0011.lim:
[testng] [2024-11-03 00:22:33,054] [pool-1-thread-1] Initializing /data/venu/Kontrolle0019.lim:
[testng] [2024-11-03 00:22:33,227] [pool-1-thread-10] Initializing /data/venu/Kontrolle0002.lim:
[testng] [2024-11-03 00:22:33,409] [pool-1-thread-4] Initializing /data/venu/Kontrolle0018.lim:
[testng]
[testng] ===============================================
[testng] Bio-Formats software test suite
[testng] Total tests run: 1060, Failures: 0, Skips: 0
[testng] ===============================================
[testng]
BUILD SUCCESSFUL
Total time: 24 seconds
Finished: SUCCESS