Started by upstream project "BIOFORMATS-test-repo" build number 245
originally caused by:
Started by upstream project "Trigger" build number 269
originally caused by:
Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@5
[BIOFORMATS-test-folder@5] $ /bin/bash -xe /tmp/jenkins851177049508869750.sh
+ '[' lim = slidebook ']'
++ date +%u
+ '[' 1 -le 1 ']'
+ DOCKER_ARGS='-Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR'
+ sudo docker run --rm --name BIOFORMATS-test-folder_38511_merge_ci -v /uod/idr/repos/curated/lim:/data -v /uod/idr-scratch/merge-ci/curated/lim:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
[echo] isSnapshot = true
init-title:
[echo] ----------=========== bio-formats-testing-framework ===========----------
init-timestamp:
init:
copy-resources:
compile:
[resolver:resolve] Resolving artifacts
compile-tests:
[resolver:resolve] Resolving artifacts
[javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
test-automated:
[testng] File leak detector installed
[testng] 00:24:12,782 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
[testng] 00:24:12,783 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - No custom configurators were discovered as a service.
[testng] 00:24:12,783 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 00:24:12,784 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 00:24:12,784 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
[testng] 00:24:12,785 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
[testng] 00:24:12,785 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
[testng] 00:24:12,785 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 00:24:12,785 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 00:24:12,786 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
[testng] 00:24:12,786 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
[testng] 00:24:12,786 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
[testng] 00:24:13,001 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
[testng] 00:24:13,001 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
[testng] 00:24:13,027 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
[testng] 00:24:13,027 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
[testng] 00:24:13,035 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
[testng] 00:24:13,035 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
[testng] 00:24:13,035 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
[testng] 00:24:13,035 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
[testng] 00:24:13,035 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@7a69b07 - End of configuration.
[testng] 00:24:13,036 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@636be97c - Registering current configuration as safe fallback point
[testng] 00:24:13,036 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 251 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
[testng] [2024-11-04 00:24:13,046] [main] java.version = 1.8.0_342
[testng] 00:24:13,049 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
[testng] 00:24:13,049 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:24:13,092 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-11-04_00-24-13.log]
[testng] 00:24:13,093 |-INFO in ch.qos.logback.core.sift.SiftProcessor@13c9d689 - End of configuration.
[testng] [2024-11-04 00:24:13,095] [main] testng.directory = /data
[testng] [2024-11-04 00:24:13,095] [main] testng.configDirectory = /config
[testng] [2024-11-04 00:24:13,106] [main] testng.multiplier = 1.0
[testng] [2024-11-04 00:24:13,107] [main] testng.in-memory = false
[testng] [2024-11-04 00:24:13,107] [main] testng.allow-missing = false
[testng] [2024-11-04 00:24:13,107] [main] user.language = fr
[testng] [2024-11-04 00:24:13,107] [main] user.country = FR
[testng] [2024-11-04 00:24:13,107] [main] Maximum heap size = 13653 MB
[testng] Scanning for files...
[testng] [2024-11-04 00:24:13,909] [main] ----------------------------------------
[testng] [2024-11-04 00:24:13,910] [main] Total files: 21
[testng] [2024-11-04 00:24:13,910] [main] Scan time: 0.802 s (38 ms/file)
[testng] [2024-11-04 00:24:13,910] [main] ----------------------------------------
[testng] Building list of tests...
[testng] Ready to test 20 files
[testng] [TestNG] Running:
[testng] Bio-Formats software test suite
[testng]
[testng] [2024-11-04 00:24:41,694] [pool-1-thread-1] Initializing /data/venu/Kontrolle0003.lim:
[testng] 00:24:41,694 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
[testng] 00:24:41,695 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:24:41,695 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-11-04_00-24-41.log]
[testng] 00:24:41,696 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7b9e1068 - End of configuration.
[testng] [2024-11-04 00:24:43,874] [pool-1-thread-12] Initializing /data/venu/Kontrolle0016.lim:
[testng] 00:24:43,874 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
[testng] 00:24:43,875 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:24:43,875 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-11-04_00-24-43.log]
[testng] 00:24:43,876 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6376be71 - End of configuration.
[testng] [2024-11-04 00:24:45,068] [pool-1-thread-11] Initializing /data/venu/Kontrolle0019.lim:
[testng] 00:24:45,068 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
[testng] 00:24:45,068 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:24:45,068 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-11-04_00-24-45.log]
[testng] 00:24:45,069 |-INFO in ch.qos.logback.core.sift.SiftProcessor@16fd7289 - End of configuration.
[testng] [2024-11-04 00:24:45,927] [pool-1-thread-10] Initializing /data/venu/Kontrolle0010.lim:
[testng] 00:24:45,927 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
[testng] 00:24:45,927 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:24:45,928 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-11-04_00-24-45.log]
[testng] 00:24:45,928 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5a4a49ba - End of configuration.
[testng] [2024-11-04 00:24:46,972] [pool-1-thread-9] Initializing /data/venu/Kontrolle0007.lim:
[testng] 00:24:46,972 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
[testng] 00:24:46,972 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:24:46,973 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-11-04_00-24-46.log]
[testng] 00:24:46,973 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4a473ed6 - End of configuration.
[testng] [2024-11-04 00:24:48,358] [pool-1-thread-8] Initializing /data/venu/Kontrolle0018.lim:
[testng] 00:24:48,358 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
[testng] 00:24:48,358 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:24:48,359 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-11-04_00-24-48.log]
[testng] 00:24:48,360 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6354a827 - End of configuration.
[testng] [2024-11-04 00:24:50,047] [pool-1-thread-7] Initializing /data/venu/Kontrolle0009.lim:
[testng] 00:24:50,047 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
[testng] 00:24:50,047 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:24:50,048 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-11-04_00-24-50.log]
[testng] 00:24:50,048 |-INFO in ch.qos.logback.core.sift.SiftProcessor@15903fda - End of configuration.
[testng] [2024-11-04 00:24:51,406] [pool-1-thread-6] Initializing /data/venu/Kontrolle0008.lim:
[testng] 00:24:51,407 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
[testng] 00:24:51,407 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:24:51,407 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-11-04_00-24-51.log]
[testng] 00:24:51,408 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2129769 - End of configuration.
[testng] [2024-11-04 00:24:52,428] [pool-1-thread-5] Initializing /data/venu/Kontrolle0005.lim:
[testng] 00:24:52,428 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
[testng] 00:24:52,428 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:24:52,429 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-11-04_00-24-52.log]
[testng] 00:24:52,429 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2b19f54c - End of configuration.
[testng] [2024-11-04 00:24:54,022] [pool-1-thread-4] Initializing /data/venu/Kontrolle0004.lim:
[testng] 00:24:54,022 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
[testng] 00:24:54,022 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:24:54,023 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-11-04_00-24-54.log]
[testng] 00:24:54,023 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4092618a - End of configuration.
[testng] [2024-11-04 00:24:55,826] [pool-1-thread-3] Initializing /data/venu/Kontrolle0014.lim:
[testng] 00:24:55,827 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
[testng] 00:24:55,827 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:24:55,827 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-11-04_00-24-55.log]
[testng] 00:24:55,828 |-INFO in ch.qos.logback.core.sift.SiftProcessor@73d2419e - End of configuration.
[testng] [2024-11-04 00:24:57,299] [pool-1-thread-2] Initializing /data/venu/Kontrolle0001.lim:
[testng] 00:24:57,299 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
[testng] 00:24:57,299 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:24:57,300 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-11-04_00-24-57.log]
[testng] 00:24:57,300 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7b9039e0 - End of configuration.
[testng] [2024-11-04 00:25:13,824] [pool-1-thread-11] Initializing /data/venu/Kontrolle0020.lim:
[testng] [2024-11-04 00:25:15,178] [pool-1-thread-9] Initializing /data/venu/Kontrolle0015.lim:
[testng] [2024-11-04 00:25:16,467] [pool-1-thread-5] Initializing /data/venu/Kontrolle0013.lim:
[testng] [2024-11-04 00:25:17,424] [pool-1-thread-12] Initializing /data/venu/Kontrolle0021.lim:
[testng] [2024-11-04 00:25:18,733] [pool-1-thread-8] Initializing /data/venu/Kontrolle0017.lim:
[testng] [2024-11-04 00:25:20,270] [pool-1-thread-3] Initializing /data/venu/Kontrolle0002.lim:
[testng] [2024-11-04 00:25:21,705] [pool-1-thread-7] Initializing /data/venu/Kontrolle0011.lim:
[testng] [2024-11-04 00:25:23,526] [pool-1-thread-1] Initializing /data/venu/Kontrolle0012.lim:
[testng]
[testng] ===============================================
[testng] Bio-Formats software test suite
[testng] Total tests run: 1060, Failures: 0, Skips: 0
[testng] ===============================================
[testng]
BUILD SUCCESSFUL
Total time: 1 minute 30 seconds
Finished: SUCCESS