Started by upstream project "BIOFORMATS-test-repo" build number 245
originally caused by:
 Started by upstream project "Trigger" build number 269
 originally caused by:
  Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@2
[BIOFORMATS-test-folder@2] $ /bin/bash -xe /tmp/jenkins7547965979595815741.sh
+ '[' sis = slidebook ']'
++ date +%u
+ '[' 1 -le 1 ']'
+ DOCKER_ARGS='-Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR'
+ sudo docker run --rm --name BIOFORMATS-test-folder_38578_merge_ci -v /uod/idr/repos/curated/sis:/data -v /uod/idr-scratch/merge-ci/curated/sis:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
     [echo] isSnapshot = true

init-title:
     [echo] ----------=========== bio-formats-testing-framework ===========----------

init-timestamp:

init:

copy-resources:

compile:
[resolver:resolve] Resolving artifacts

compile-tests:
[resolver:resolve] Resolving artifacts
    [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test

test-automated:
   [testng] File leak detector installed
   [testng] 05:15:47,016 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
   [testng] 05:15:47,017 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - No custom configurators were discovered as a service.
   [testng] 05:15:47,017 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 05:15:47,018 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 05:15:47,019 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
   [testng] 05:15:47,019 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
   [testng] 05:15:47,019 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
   [testng] 05:15:47,019 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 05:15:47,020 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 05:15:47,020 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
   [testng] 05:15:47,020 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
   [testng] 05:15:47,020 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
   [testng] 05:15:47,244 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
   [testng] 05:15:47,244 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
   [testng] 05:15:47,272 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
   [testng] 05:15:47,272 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
   [testng] 05:15:47,280 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
   [testng] 05:15:47,280 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
   [testng] 05:15:47,280 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
   [testng] 05:15:47,281 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
   [testng] 05:15:47,281 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@7a69b07 - End of configuration.
   [testng] 05:15:47,281 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@636be97c - Registering current configuration as safe fallback point
   [testng] 05:15:47,282 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 263 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
   [testng] [2024-11-04 05:15:47,291] [main] java.version = 1.8.0_342
   [testng] 05:15:47,295 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
   [testng] 05:15:47,295 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 05:15:47,339 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-11-04_05-15-47.log]
   [testng] 05:15:47,341 |-INFO in ch.qos.logback.core.sift.SiftProcessor@13c9d689 - End of configuration.
   [testng] [2024-11-04 05:15:47,343] [main] testng.directory = /data
   [testng] [2024-11-04 05:15:47,343] [main] testng.configDirectory = /config
   [testng] [2024-11-04 05:15:47,355] [main] testng.multiplier = 1.0
   [testng] [2024-11-04 05:15:47,355] [main] testng.in-memory = false
   [testng] [2024-11-04 05:15:47,355] [main] testng.allow-missing = false
   [testng] [2024-11-04 05:15:47,355] [main] user.language = fr
   [testng] [2024-11-04 05:15:47,355] [main] user.country = FR
   [testng] [2024-11-04 05:15:47,355] [main] Maximum heap size = 13653 MB
   [testng] Scanning for files...
   [testng] [2024-11-04 05:16:05,170] [main] ----------------------------------------
   [testng] [2024-11-04 05:16:05,171] [main] Total files: 13
   [testng] [2024-11-04 05:16:05,171] [main] Scan time: 17.815 s (1370 ms/file)
   [testng] [2024-11-04 05:16:05,171] [main] ----------------------------------------
   [testng] Building list of tests...
   [testng] Ready to test 11 files
   [testng] [TestNG] Running:
   [testng]   Bio-Formats software test suite
   [testng] 
   [testng] [2024-11-04 05:17:47,130] [pool-1-thread-1] Initializing /data/russell/Arbacia 2week ADL.tif: 
   [testng] 05:17:47,131 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
   [testng] 05:17:47,131 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 05:17:47,132 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-11-04_05-17-47.log]
   [testng] 05:17:47,132 |-INFO in ch.qos.logback.core.sift.SiftProcessor@68b9cec4 - End of configuration.
   [testng] [2024-11-04 05:17:55,359] [pool-1-thread-11] Initializing /data/glen/L1468a-2_4_15000X.tif: 
   [testng] 05:17:55,359 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
   [testng] 05:17:55,359 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 05:17:55,360 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-11-04_05-17-55.log]
   [testng] 05:17:55,360 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1b6d84ce - End of configuration.
   [testng] [2024-11-04 05:18:02,614] [pool-1-thread-10] Initializing /data/glen/L1500k P_4_7500X.tif: 
   [testng] 05:18:02,614 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
   [testng] 05:18:02,614 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 05:18:02,615 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-11-04_05-18-02.log]
   [testng] 05:18:02,615 |-INFO in ch.qos.logback.core.sift.SiftProcessor@172c99b5 - End of configuration.
   [testng] [2024-11-04 05:18:08,056] [pool-1-thread-9] Initializing /data/strand/MIA.tif: 
   [testng] 05:18:08,056 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
   [testng] 05:18:08,056 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 05:18:08,057 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-11-04_05-18-08.log]
   [testng] 05:18:08,057 |-INFO in ch.qos.logback.core.sift.SiftProcessor@49f82dc1 - End of configuration.
   [testng] [2024-11-04 05:18:16,082] [pool-1-thread-8] Initializing /data/glen/CG 3.31 10K.tif: 
   [testng] 05:18:16,083 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
   [testng] 05:18:16,083 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 05:18:16,083 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-11-04_05-18-16.log]
   [testng] 05:18:16,084 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6f4e816e - End of configuration.
   [testng] [2024-11-04 05:18:23,757] [pool-1-thread-7] Initializing /data/dimitri/ELN-ARM_00049_38.tif: 
   [testng] 05:18:23,757 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
   [testng] 05:18:23,757 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 05:18:23,758 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-11-04_05-18-23.log]
   [testng] 05:18:23,758 |-INFO in ch.qos.logback.core.sift.SiftProcessor@32b30196 - End of configuration.
   [testng] [2024-11-04 05:18:31,494] [pool-1-thread-6] Initializing /data/pki/Tv2.tif: 
   [testng] 05:18:31,494 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
   [testng] 05:18:31,494 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 05:18:31,495 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-11-04_05-18-31.log]
   [testng] 05:18:31,495 |-INFO in ch.qos.logback.core.sift.SiftProcessor@72587cb4 - End of configuration.
   [testng] [2024-11-04 05:18:38,782] [pool-1-thread-5] Initializing /data/glen/CG 3.31 20K.tif: 
   [testng] 05:18:38,782 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
   [testng] 05:18:38,782 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 05:18:38,783 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-11-04_05-18-38.log]
   [testng] 05:18:38,783 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7054967c - End of configuration.
   [testng] [2024-11-04 05:18:44,040] [pool-1-thread-4] Initializing /data/glen/L1500k P_3_7500X.tif: 
   [testng] 05:18:44,040 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
   [testng] 05:18:44,040 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 05:18:44,041 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-11-04_05-18-44.log]
   [testng] 05:18:44,041 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2da123a8 - End of configuration.
   [testng] [2024-11-04 05:18:49,606] [pool-1-thread-3] Initializing /data/glen/CG 3.31 15K.tif: 
   [testng] 05:18:49,606 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
   [testng] 05:18:49,606 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 05:18:49,607 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-11-04_05-18-49.log]
   [testng] 05:18:49,607 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4cad303 - End of configuration.
   [testng] [2024-11-04 05:18:53,870] [pool-1-thread-2] Initializing /data/strand/FS44-1-254.tif: 
   [testng] 05:18:53,870 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
   [testng] 05:18:53,871 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 05:18:53,871 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-11-04_05-18-53.log]
   [testng] 05:18:53,872 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2e1d044f - End of configuration.
   [testng] 
   [testng] ===============================================
   [testng] Bio-Formats software test suite
   [testng] Total tests run: 583, Failures: 0, Skips: 0
   [testng] ===============================================
   [testng] 

BUILD SUCCESSFUL
Total time: 3 minutes 59 seconds
Finished: SUCCESS