Started by upstream project "BIOFORMATS-test-repo" build number 245
originally caused by:
Started by upstream project "Trigger" build number 269
originally caused by:
Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@6
[BIOFORMATS-test-folder@6] $ /bin/bash -xe /tmp/jenkins17344697279230386549.sh
+ '[' sxm = slidebook ']'
++ date +%u
+ '[' 1 -le 1 ']'
+ DOCKER_ARGS='-Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR'
+ sudo docker run --rm --name BIOFORMATS-test-folder_38585_merge_ci -v /uod/idr/repos/curated/sxm:/data -v /uod/idr-scratch/merge-ci/curated/sxm:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
[echo] isSnapshot = true
init-title:
[echo] ----------=========== bio-formats-testing-framework ===========----------
init-timestamp:
init:
copy-resources:
compile:
[resolver:resolve] Resolving artifacts
compile-tests:
[resolver:resolve] Resolving artifacts
[javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
test-automated:
[testng] File leak detector installed
[testng] 05:36:04,228 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
[testng] 05:36:04,230 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - No custom configurators were discovered as a service.
[testng] 05:36:04,230 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 05:36:04,231 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 05:36:04,231 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
[testng] 05:36:04,231 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
[testng] 05:36:04,231 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
[testng] 05:36:04,231 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 05:36:04,232 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 05:36:04,232 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
[testng] 05:36:04,232 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
[testng] 05:36:04,232 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
[testng] 05:36:04,451 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
[testng] 05:36:04,452 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
[testng] 05:36:04,478 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
[testng] 05:36:04,479 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
[testng] 05:36:04,486 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
[testng] 05:36:04,486 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
[testng] 05:36:04,486 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
[testng] 05:36:04,487 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
[testng] 05:36:04,487 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@7a69b07 - End of configuration.
[testng] 05:36:04,488 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@636be97c - Registering current configuration as safe fallback point
[testng] 05:36:04,488 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 256 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
[testng] [2024-11-04 05:36:04,497] [main] java.version = 1.8.0_342
[testng] 05:36:04,501 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
[testng] 05:36:04,501 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 05:36:04,544 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-11-04_05-36-04.log]
[testng] 05:36:04,546 |-INFO in ch.qos.logback.core.sift.SiftProcessor@13c9d689 - End of configuration.
[testng] [2024-11-04 05:36:04,548] [main] testng.directory = /data
[testng] [2024-11-04 05:36:04,548] [main] testng.configDirectory = /config
[testng] [2024-11-04 05:36:04,560] [main] testng.multiplier = 1.0
[testng] [2024-11-04 05:36:04,560] [main] testng.in-memory = false
[testng] [2024-11-04 05:36:04,560] [main] testng.allow-missing = false
[testng] [2024-11-04 05:36:04,560] [main] user.language = fr
[testng] [2024-11-04 05:36:04,560] [main] user.country = FR
[testng] [2024-11-04 05:36:04,560] [main] Maximum heap size = 13653 MB
[testng] Scanning for files...
[testng] [2024-11-04 05:49:49,043] [main] ----------------------------------------
[testng] [2024-11-04 05:49:49,044] [main] Total files: 268
[testng] [2024-11-04 05:49:49,044] [main] Scan time: 824.483 s (3076 ms/file)
[testng] [2024-11-04 05:49:49,044] [main] ----------------------------------------
[testng] Building list of tests...
[testng] Ready to test 160 files
[testng] [TestNG] Running:
[testng] Bio-Formats software test suite
[testng]
[testng] [2024-11-04 06:14:06,767] [pool-1-thread-1] Initializing /data/steve/Gatan/Gatan (Sue D)/THE FLY A:
[testng] 06:14:06,767 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
[testng] 06:14:06,767 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 06:14:06,768 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-11-04_06-14-06.log]
[testng] 06:14:06,768 |-INFO in ch.qos.logback.core.sift.SiftProcessor@68cbc47c - End of configuration.
[testng] [2024-11-04 06:14:07,804] [pool-1-thread-12] Initializing /data/steve/TIFF/Macrophage cell images/D1-A-1 1392 36-bit.tif:
[testng] 06:14:07,804 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
[testng] 06:14:07,804 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 06:14:07,804 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-11-04_06-14-07.log]
[testng] 06:14:07,805 |-INFO in ch.qos.logback.core.sift.SiftProcessor@204b25cd - End of configuration.
[testng] [2024-11-04 06:14:10,123] [pool-1-thread-11] Initializing /data/steve/VG SAM (Karen)/BGND.DTI:
[testng] 06:14:10,123 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
[testng] 06:14:10,124 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 06:14:10,124 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-11-04_06-14-10.log]
[testng] 06:14:10,125 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6eafbe6f - End of configuration.
[testng] [2024-11-04 06:14:11,058] [pool-1-thread-10] Initializing /data/steve/SM-Camera/Orhan + IPES rig:
[testng] 06:14:11,058 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
[testng] 06:14:11,058 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 06:14:11,059 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-11-04_06-14-11.log]
[testng] 06:14:11,059 |-INFO in ch.qos.logback.core.sift.SiftProcessor@433fe316 - End of configuration.
[testng] [2024-11-04 06:14:19,165] [pool-1-thread-9] Initializing /data/steve/Quesant Instr/Quesant v1.2 (Marc F)/stm2.afm:
[testng] 06:14:19,165 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
[testng] 06:14:19,165 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 06:14:19,166 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-11-04_06-14-19.log]
[testng] 06:14:19,166 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6e6b8c41 - End of configuration.
[testng] [2024-11-04 06:14:21,803] [pool-1-thread-8] Initializing /data/steve/Misc SXM test images/BMP images/m20_p.bmp:
[testng] 06:14:21,803 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
[testng] 06:14:21,804 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 06:14:21,804 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-11-04_06-14-21.log]
[testng] 06:14:21,804 |-INFO in ch.qos.logback.core.sift.SiftProcessor@17cbe5a2 - End of configuration.
[testng] [2024-11-04 06:14:22,518] [pool-1-thread-7] Initializing /data/steve/Hamamatsu (Keith B)/HIS-8bit.HIS:
[testng] 06:14:22,518 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
[testng] 06:14:22,518 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 06:14:22,519 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-11-04_06-14-22.log]
[testng] 06:14:22,519 |-INFO in ch.qos.logback.core.sift.SiftProcessor@8ac62ad - End of configuration.
[testng] [2024-11-04 06:14:24,698] [pool-1-thread-6] Initializing /data/steve/Gatan/Gatan TIFF/THE FLY 4 TIFF:
[testng] 06:14:24,698 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
[testng] 06:14:24,698 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 06:14:24,699 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-11-04_06-14-24.log]
[testng] 06:14:24,699 |-INFO in ch.qos.logback.core.sift.SiftProcessor@483eb7cb - End of configuration.
[testng] [2024-11-04 06:14:34,079] [pool-1-thread-5] Initializing /data/steve/TopoMetrix/Topo STM (Liam McD)/GRID1.TFR:
[testng] 06:14:34,079 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
[testng] 06:14:34,079 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 06:14:34,080 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-11-04_06-14-34.log]
[testng] 06:14:34,080 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6ddf3eab - End of configuration.
[testng] [2024-11-04 06:14:36,998] [pool-1-thread-4] Initializing /data/steve/TopoMetrix/Topo MFM (SC)/NDPOL-01.TFR:
[testng] 06:14:36,998 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
[testng] 06:14:36,998 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 06:14:36,999 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-11-04_06-14-36.log]
[testng] 06:14:36,999 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2c600b7 - End of configuration.
[testng] [2024-11-04 06:14:39,774] [pool-1-thread-3] Initializing /data/steve/Quesant Instr/Quesant v1.2 (Marc F)/afm1.afm:
[testng] 06:14:39,774 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
[testng] 06:14:39,774 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 06:14:39,775 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-11-04_06-14-39.log]
[testng] 06:14:39,775 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3aebbfc4 - End of configuration.
[testng] [2024-11-04 06:14:41,657] [pool-1-thread-2] Initializing /data/steve/TopoMetrix/Topo SFM (SC)/PA7.TFR:
[testng] 06:14:41,657 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
[testng] 06:14:41,657 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 06:14:41,658 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-11-04_06-14-41.log]
[testng] 06:14:41,658 |-INFO in ch.qos.logback.core.sift.SiftProcessor@776b4315 - End of configuration.
[testng] [2024-11-04 06:14:54,227] [pool-1-thread-8] Initializing /data/steve/Quesant Instr/Quesant v1.2 (Marc F)/afm2.afm:
[testng] [2024-11-04 06:14:59,462] [pool-1-thread-1] Initializing /data/steve/Leica TCS (Keith B)/25_5BJ.SXM:
[testng] [2024-11-04 06:15:10,035] [pool-1-thread-11] Initializing /data/steve/RHK Tech/RHK (Mark Flowers)/Demo04.sm2:
[testng] [2024-11-04 06:15:16,935] [pool-1-thread-2] Initializing /data/steve/Zeiss LSM/Zeiss LSM (Ewald B)/FGD006.TIF:
[testng] [2024-11-04 06:15:27,391] [pool-1-thread-4] Initializing /data/steve/Gatan/Gatan TIFF/BALL TIFF:
[testng] [2024-11-04 06:15:34,756] [pool-1-thread-3] Initializing /data/steve/TIFF/ta123 stack TIFF:
[testng] [2024-11-04 06:15:41,033] [pool-1-thread-9] Initializing /data/steve/JEOL/WinSem (Sue)/RICK1.IMG:
[testng] [2024-11-04 06:15:44,067] [pool-1-thread-5] Initializing /data/steve/RHK Tech/RHK-XPM Pro (Lydie L)/B70417000K.SM3:
[testng] [2024-11-04 06:15:46,815] [pool-1-thread-7] Initializing /data/steve/RHK Tech/RHK (Bob Baker)/Examp_01.SM2:
[testng] [2024-11-04 06:15:51,749] [pool-1-thread-12] Initializing /data/steve/Oxford Instr (Yoshimasa)/80619a.top:
[testng] [2024-11-04 06:15:54,633] [pool-1-thread-8] Initializing /data/steve/Burleigh/Burleigh v2/Burleigh v2 (Phil W)/0_h4_4.img:
[testng] [2024-11-04 06:16:06,302] [pool-1-thread-11] Initializing /data/steve/FITS/Meade DSI/M31bG1.fts:
[testng] [2024-11-04 06:16:12,769] [pool-1-thread-5] Initializing /data/steve/Hamamatsu (Keith B)/HIS-16bit-packed.HIS:
[testng] [2024-11-04 06:16:14,477] [pool-1-thread-7] Initializing /data/steve/Misc SXM test images/Stacks/Fred's stack:
[testng] [2024-11-04 06:16:23,169] [pool-1-thread-6] Initializing /data/steve/FITS/M13.fits:
[testng] [2024-11-04 06:16:23,751] [pool-1-thread-10] Initializing /data/steve/FITS/M51.fits:
[testng] [2024-11-04 06:16:24,544] [pool-1-thread-12] Initializing /data/steve/JPK Instr (Christian L)/Anti-reflex-coating.jpk:
[testng] [2024-11-04 06:16:31,052] [pool-1-thread-11] Initializing /data/steve/JPK Instr (Christian L)/Titanium-implant.jpk:
[testng] [2024-11-04 06:16:38,346] [pool-1-thread-10] Initializing /data/steve/Hamamatsu (Keith B)/HIS-12bit-3.HIS:
[testng] [2024-11-04 06:16:41,074] [pool-1-thread-6] Initializing /data/steve/TIFF/Macrophage cell images/RT1-f-24 1600 24-bit.tif:
[testng] [2024-11-04 06:16:46,888] [pool-1-thread-9] Initializing /data/steve/Leica TCS (Keith B)/25_5BB.SXM:
[testng] [2024-11-04 06:16:51,851] [pool-1-thread-1] Initializing /data/steve/Gatan/TEM (Larry Thomas)/TEM 10 KX:
[testng] [2024-11-04 06:16:58,311] [pool-1-thread-2] Initializing /data/steve/Seiko Instr (Hwansoo)/05808001-3.xqd:
[testng] [2024-11-04 06:17:01,321] [pool-1-thread-4] Initializing /data/steve/Philips (Markus G)/135-30.IMG:
[testng] [2024-11-04 06:17:04,419] [pool-1-thread-3] Initializing /data/steve/Gatan/Gatan (Sue D)/THE FLY 3:
[testng] [2024-11-04 06:17:06,199] [pool-1-thread-5] Initializing /data/steve/TIFF/Macrophage cell images/T48-44 800 24-bit.tif:
[testng] [2024-11-04 06:17:22,649] [pool-1-thread-1] Initializing /data/steve/UBM (Rosset)/SG2.PR3:
[testng] [2024-11-04 06:17:29,275] [pool-1-thread-11] Initializing /data/steve/JEOL/SPM (Hiroyuki Isobe)/990301c.tif:
[testng] [2024-11-04 06:17:38,561] [pool-1-thread-12] Initializing /data/steve/Gatan/Gatan (Patrick Burton)/PDB_DARK_25k.dm2:
[testng] [2024-11-04 06:17:40,158] [pool-1-thread-10] Initializing /data/steve/TIFF/CONCRETE TIFF:
[testng] [2024-11-04 06:17:47,831] [pool-1-thread-8] Initializing /data/steve/JEOL/SEM (Steve Foulds)/IPS2000.DAT:
[testng] [2024-11-04 06:17:51,744] [pool-1-thread-4] Initializing /data/steve/TIFF/Macrophage cell images/T24-24 1600 36_48-bit.tif:
[testng] [2024-11-04 06:17:57,456] [pool-1-thread-2] Initializing /data/steve/Molecular Imaging/Mol Imag v4.18 (Reinat)/npc-liq-sharO_003.STP:
[testng] [2024-11-04 06:17:59,411] [pool-1-thread-7] Initializing /data/steve/TopoMetrix/Topo STM v4 (Gabriella)/159HF02.ZFP:
[testng] [2024-11-04 06:18:05,871] [pool-1-thread-3] Initializing /data/steve/Molecular Imaging/Mol Imag v5.2 (Steve Higgins)/014.STP:
[testng] [2024-11-04 06:18:16,730] [pool-1-thread-1] Initializing /data/steve/Oxford Instr (Yoshimasa)/98042103.TIF:
[testng] [2024-11-04 06:18:26,579] [pool-1-thread-12] Initializing /data/steve/Quesant Instr/Quesant v2.0 (Brad Taft)/03031004.afm:
[testng] [2024-11-04 06:18:32,903] [pool-1-thread-9] Initializing /data/steve/TopoMetrix/Topo STM v5 (Ewald B)/c80-50zfr.tif:
[testng] [2024-11-04 06:18:39,472] [pool-1-thread-7] Initializing /data/steve/Molecular Imaging/Mol Imag v5.2 (Steve Higgins)/015.STP:
[testng] [2024-11-04 06:18:41,701] [pool-1-thread-6] Initializing /data/steve/RHK Tech/RHK (Oliver Leifeld)/SM02_08.SM2:
[testng] [2024-11-04 06:18:44,881] [pool-1-thread-2] Initializing /data/steve/Burleigh/Burleigh v2/Burleigh v2 (Phil W)/0_h4_3.img:
[testng] [2024-11-04 06:18:53,776] [pool-1-thread-5] Initializing /data/steve/Zeiss LSM/Zeiss LSM (John S)/Zeiss LSM 1 sample:pixel/ug6proj3.lsm:
[testng] [2024-11-04 06:18:58,173] [pool-1-thread-8] Initializing /data/steve/Misc SXM test images/Chromosome images/HKGmaizeMitose5.pict:
[testng] [2024-11-04 06:19:00,013] [pool-1-thread-3] Initializing /data/steve/Hamamatsu (Keith B)/HIS-12bit-1a.HIS:
[testng] [2024-11-04 06:19:09,088] [pool-1-thread-12] Initializing /data/steve/TIFF/Little owl TIFF:
[testng] [2024-11-04 06:19:15,259] [pool-1-thread-6] Initializing /data/steve/JEOL/WinSem (Sue)/CONCRETE.IMG:
[testng] [2024-11-04 06:19:18,150] [pool-1-thread-7] Initializing /data/steve/Gatan/Gatan PC (Eric Leroy)/Oxygen map 1.dm3:
[testng] [2024-11-04 06:19:21,448] [pool-1-thread-8] Initializing /data/steve/Molecular Imaging/Mol Imag v4.18 (Reinat)/car-mac-con-g_003.STP:
[testng] [2024-11-04 06:19:24,397] [pool-1-thread-10] Initializing /data/steve/JEOL/WinSem (Sue)/SIC2.IMG:
[testng] [2024-11-04 06:19:29,149] [pool-1-thread-4] Initializing /data/steve/Unisoku (Takashi)/Sample.HDR:
[testng] [2024-11-04 06:19:32,575] [pool-1-thread-11] Initializing /data/steve/TIFF/CD-ROM TIFF:
[testng] [2024-11-04 06:19:39,742] [pool-1-thread-1] Initializing /data/steve/FITS/Meade DSI/M31bB1.fts:
[testng] [2024-11-04 06:19:41,861] [pool-1-thread-3] Initializing /data/steve/Hamamatsu (Keith B)/HIS-16bit-nopack.HIS:
[testng] [2024-11-04 06:19:46,106] [pool-1-thread-9] Initializing /data/steve/Philips (Markus G)/302.IMG:
[testng] [2024-11-04 06:19:46,991] [pool-1-thread-5] Initializing /data/steve/JEOL/WinSem (Sue)/TA.IMG:
[testng] [2024-11-04 06:19:50,564] [pool-1-thread-2] Initializing /data/steve/Misc SXM test images/AVI movie/Clean Cu(110) LEED.avi:
[testng] [2024-11-04 06:19:53,525] [pool-1-thread-7] Initializing /data/steve/TopoMetrix/Topo STM v5 (Ewald B)/c80-50.ffr:
[testng] [2024-11-04 06:19:56,481] [pool-1-thread-1] Initializing /data/steve/Bio-Rad (Nico Lindegger)/a.PIC:
[testng] [2024-11-04 06:19:59,519] [pool-1-thread-8] Initializing /data/steve/FITS/M104.fits:
[testng] [2024-11-04 06:20:06,503] [pool-1-thread-3] Initializing /data/steve/TopoMetrix/Topo SFM (SC)/IM_P1.TFR:
[testng] [2024-11-04 06:20:08,005] [pool-1-thread-6] Initializing /data/steve/JEOL/SPM (Masashi N)/FFM204.TIF:
[testng] [2024-11-04 06:20:17,538] [pool-1-thread-2] Initializing /data/steve/Quesant Instr/Quesant v1.2 (Marc F)/afm3.afm:
[testng] [2024-11-04 06:20:20,661] [pool-1-thread-12] Initializing /data/steve/RHK Tech/RHK (Bob Baker)/Examp_04.SM2:
[testng] [2024-11-04 06:20:22,349] [pool-1-thread-9] Initializing /data/steve/TopoMetrix/Topo SFM (SC)/PA2.TFR:
[testng] [2024-11-04 06:20:26,362] [pool-1-thread-8] Initializing /data/steve/Philips (Markus G)/135-32.IMG:
[testng] [2024-11-04 06:20:28,683] [pool-1-thread-7] Initializing /data/steve/Burleigh/Burleigh v1/Burleigh.IMG:
[testng] [2024-11-04 06:20:34,921] [pool-1-thread-11] Initializing /data/steve/Bio-Rad (Nico Lindegger)/b.PIC:
[testng] [2024-11-04 06:20:37,641] [pool-1-thread-10] Initializing /data/steve/TIFF/Macrophage cell images/Pre-d-0 1392 36-bit.tif:
[testng] [2024-11-04 06:20:41,406] [pool-1-thread-1] Initializing /data/steve/FITS/Meade DSI/M31bR1.fts:
[testng] [2024-11-04 06:20:44,736] [pool-1-thread-3] Initializing /data/steve/JEOL/SPM (Hiroyuki Isobe)/HOPG.tif:
[testng] [2024-11-04 06:20:51,259] [pool-1-thread-5] Initializing /data/steve/RHK Tech/RHK (Bob Baker)/Examp_05.SM2:
[testng] [2024-11-04 06:20:53,254] [pool-1-thread-9] Initializing /data/steve/JEOL/SPM (Hiroyuki Isobe)/990304j.tif:
[testng] [2024-11-04 06:20:59,261] [pool-1-thread-2] Initializing /data/steve/JEOL/SPM (Hiroyuki Isobe)/JEOL3.tif:
[testng] [2024-11-04 06:21:06,818] [pool-1-thread-12] Initializing /data/steve/Misc SXM test images/Stacks/DoF test stack (Ahnelt):
[testng] [2024-11-04 06:21:13,844] [pool-1-thread-4] Initializing /data/steve/Molecular Imaging/Mol Imag v5.0 (Lionel S)/Cu#18-NaOH-035.STP:
[testng] [2024-11-04 06:21:18,847] [pool-1-thread-1] Initializing /data/steve/RHK Tech/RHK IV (Koji N)/02042603.sm2:
[testng] [2024-11-04 06:21:20,174] [pool-1-thread-8] Initializing /data/steve/Misc SXM test images/Chromosome images/Chironomus2.pict:
[testng] [2024-11-04 06:21:24,980] [pool-1-thread-11] Initializing /data/steve/RHK Tech/RHK (Mark Flowers)/Silicon.sm2:
[testng] [2024-11-04 06:21:28,572] [pool-1-thread-5] Initializing /data/steve/TopoMetrix/Topo STM v5 (Ewald B)/c80-50.zfr:
[testng] [2024-11-04 06:21:35,618] [pool-1-thread-10] Initializing /data/steve/RHK Tech/RHK-XPM Pro (Lydie L)/B70417000Q.SM3:
[testng] [2024-11-04 06:21:37,325] [pool-1-thread-6] Initializing /data/steve/Philips (Markus G)/135-33.IMG:
[testng] [2024-11-04 06:21:38,641] [pool-1-thread-4] Initializing /data/steve/Misc SXM test images/Hough transform/Nathalie's test:
[testng] [2024-11-04 06:21:41,867] [pool-1-thread-8] Initializing /data/steve/Zeiss LSM/Zeiss LSM (John S)/Zeiss LSM 2 samples:pixel/coltubfitc1proj.lsm:
[testng] [2024-11-04 06:21:43,877] [pool-1-thread-7] Initializing /data/steve/TopoMetrix/Topo SFM (SC)/FFT test:
[testng] [2024-11-04 06:21:47,539] [pool-1-thread-1] Initializing /data/steve/Burleigh/Burleigh v2/Burleigh v2 (Phil W)/1_2h2_3.img:
[testng] [2024-11-04 06:21:50,480] [pool-1-thread-3] Initializing /data/steve/TIFF/Macrophage cell images/T08-08 1600 24-bit.tif:
[testng] [2024-11-04 06:21:52,410] [pool-1-thread-11] Initializing /data/steve/Gatan/Gatan (Sue D)/WOODLOUSE:
[testng] [2024-11-04 06:21:53,873] [pool-1-thread-9] Initializing /data/steve/Quesant Instr/Quesant v2.0 (Hal E)/2-18-05A.afm:
[testng] [2024-11-04 06:21:55,263] [pool-1-thread-2] Initializing /data/steve/Burleigh/Burleigh v2/Graphite:
[testng] [2024-11-04 06:22:02,090] [pool-1-thread-12] Initializing /data/steve/TIFF/Hough test TIFF:
[testng] [2024-11-04 06:22:14,049] [pool-1-thread-5] Initializing /data/steve/RHK Tech/RHK STS (Peter Sloan)/SloanSpec.SM2:
[testng] [2024-11-04 06:22:16,810] [pool-1-thread-6] Initializing /data/steve/Misc SXM test images/Fake STM/Fake STM (8 rpts) TIFF:
[testng] [2024-11-04 06:22:25,464] [pool-1-thread-10] Initializing /data/steve/RHK Tech/RHK (Bob Baker)/Examp_02.SM2:
[testng] [2024-11-04 06:22:26,703] [pool-1-thread-11] Initializing /data/steve/Quesant Instr/Quesant v1.2 (Marc F)/stm1.afm:
[testng] [2024-11-04 06:22:28,975] [pool-1-thread-9] Initializing /data/steve/Gatan/Gatan (Patrick Burton)/PDB_DARK_25k.dm3:
[testng] [2024-11-04 06:22:39,373] [pool-1-thread-5] Initializing /data/steve/Philips (Markus G)/302.TIF:
[testng] [2024-11-04 06:22:47,491] [pool-1-thread-8] Initializing /data/steve/Quesant Instr/Quesant v2.0 (Hal E)/03-17-05A.afm:
[testng] [2024-11-04 06:22:51,766] [pool-1-thread-9] Initializing /data/steve/SBIG/M81 H 250s Tr=5s:
[testng] [2024-11-04 06:22:59,930] [pool-1-thread-11] Initializing /data/steve/Gatan/Gatan Mac (Guy Mayor)/Digital Micrograph 3.4:
[testng] [2024-11-04 06:23:00,873] [pool-1-thread-10] Initializing /data/steve/Gatan/Gatan PC (Eric Leroy)/Iron map 10.dm3:
[testng] [2024-11-04 06:23:02,033] [pool-1-thread-4] Initializing /data/steve/Quesant Instr/Quesant v2.0 (Brad Taft)/03031020.afm:
[testng] [2024-11-04 06:23:08,614] [pool-1-thread-2] Initializing /data/steve/Misc SXM test images/Hough transform/Dale's bubbles:
[testng] [2024-11-04 06:23:15,703] [pool-1-thread-7] Initializing /data/steve/Molecular Imaging/Mol Imag v4.18 (Reinat)/TwoDots.STP:
[testng] [2024-11-04 06:23:19,211] [pool-1-thread-3] Initializing /data/steve/Oxford Instr (Yoshimasa)/98042103.top:
[testng] [2024-11-04 06:23:21,738] [pool-1-thread-12] Initializing /data/steve/Gatan/Gatan PC (Eric Leroy)/BF super alliage.dm3:
[testng] [2024-11-04 06:23:23,007] [pool-1-thread-8] Initializing /data/steve/Hamamatsu (Keith B)/HIS-12bit-2b.HIS:
[testng] [2024-11-04 06:23:25,478] [pool-1-thread-1] Initializing /data/steve/Misc SXM test images/Chromosome images/HKGmaizeMei3.pict:
[testng] [2024-11-04 06:23:26,876] [pool-1-thread-6] Initializing /data/steve/JEOL/WinSem (Sue)/Shuttle tile ceramic/SHUTTLEA.IMG:
[testng] [2024-11-04 06:23:34,145] [pool-1-thread-11] Initializing /data/steve/JEOL/WinSem (Sue)/Shuttle tile ceramic/SHUTTLEB.IMG:
[testng] [2024-11-04 06:23:36,944] [pool-1-thread-10] Initializing /data/steve/Targa/Test.TGA:
[testng] [2024-11-04 06:23:40,086] [pool-1-thread-12] Initializing /data/steve/RHK Tech/RHK (Bob Baker)/Examp_03.SM2:
[testng] [2024-11-04 06:23:43,118] [pool-1-thread-4] Initializing /data/steve/Philips (Markus G)/135-31.IMG:
[testng] [2024-11-04 06:23:46,104] [pool-1-thread-5] Initializing /data/steve/Seiko Instr (Hwansoo)/05808001-2.xqd:
[testng] [2024-11-04 06:23:49,356] [pool-1-thread-1] Initializing /data/steve/Gatan/Gatan (Sue D)/THE FLY:
[testng] [2024-11-04 06:23:50,304] [pool-1-thread-7] Initializing /data/steve/Quesant Instr/Quesant v1.2 (Marc F)/stm3.afm:
[testng] [2024-11-04 06:23:51,771] [pool-1-thread-3] Initializing /data/steve/TopoMetrix/Topo MFM (SC)/NDR2-1.2FL:
[testng] [2024-11-04 06:23:53,698] [pool-1-thread-8] Initializing /data/steve/RHK Tech/RHK (Mark Flowers)/Demo07.sm2:
[testng] [2024-11-04 06:24:03,856] [pool-1-thread-10] Initializing /data/steve/Seiko Instr (Hwansoo)/05808002.xqf:
[testng] [2024-11-04 06:24:06,341] [pool-1-thread-9] Initializing /data/steve/SM-Camera/W(110)+Fe,5nA,30min@110eV:
[testng] [2024-11-04 06:24:11,288] [pool-1-thread-12] Initializing /data/steve/Gatan/Gatan (Sue D)/Honey Bee:
[testng] [2024-11-04 06:24:11,996] [pool-1-thread-4] Initializing /data/steve/JEOL/WinSem (Sue)/Shuttle tile ceramic/SHUTTLEE.IMG:
[testng] [2024-11-04 06:24:14,914] [pool-1-thread-5] Initializing /data/steve/Misc SXM test images/Chromosome images/HRhuman1.pict:
[testng] [2024-11-04 06:24:16,123] [pool-1-thread-6] Initializing /data/steve/TIFF/8MAR03A.TIFF:
[testng] [2024-11-04 06:24:20,500] [pool-1-thread-2] Initializing /data/steve/Zeiss LSM/Zeiss LSM - 2 samp:pix (??)/16bcutagain.lsm:
[testng] [2024-11-04 06:24:22,753] [pool-1-thread-7] Initializing /data/steve/JPK Instr (Christian L)/Virus.jpk:
[testng] [2024-11-04 06:24:26,730] [pool-1-thread-3] Initializing /data/steve/VG SAM (Karen)/PEAK.DTI:
[testng] [2024-11-04 06:24:27,905] [pool-1-thread-8] Initializing /data/steve/Gatan/Gatan Mac (Guy Mayor)/Digital Micrograph 2.5:
[testng] [2024-11-04 06:24:28,526] [pool-1-thread-1] Initializing /data/steve/TIFF/ta269 TIFF:
[testng] [2024-11-04 06:24:36,531] [pool-1-thread-11] Initializing /data/steve/SBIG/M82 H 100s Tr=10s:
[testng] [2024-11-04 06:24:47,533] [pool-1-thread-12] Initializing /data/steve/JEOL/SPM (Masashi N)/AFM204.TIF:
[testng] [2024-11-04 06:24:53,385] [pool-1-thread-10] Initializing /data/steve/Seiko Instr (Hwansoo)/05808001.xqd:
[testng] [2024-11-04 06:24:55,551] [pool-1-thread-5] Initializing /data/steve/Zeiss LSM/Zeiss LSM (John S)/Zeiss LSM 1 sample:pixel/ug6stack3.lsm:
[testng] [2024-11-04 06:24:59,596] [pool-1-thread-8] Initializing /data/steve/TopoMetrix/Topo STM v5 (Ewald B)/c80-50ffr.tif:
[testng] [2024-11-04 06:25:05,479] [pool-1-thread-3] Initializing /data/steve/Gatan/Gatan TIFF/Si CHIP TIFF:
[testng] [2024-11-04 06:25:14,970] [pool-1-thread-2] Initializing /data/steve/RHK Tech/RHK STS (Peter Sloan)/B50303AS.SM2:
[testng] [2024-11-04 06:25:18,768] [pool-1-thread-9] Initializing /data/steve/SBIG/M81 M 40s:
[testng] [2024-11-04 06:25:26,139] [pool-1-thread-4] Initializing /data/steve/Zeiss LSM/Zeiss LSM (John S)/Zeiss LSM 2 samples:pixel/coltubfitc1.lsm:
[testng] [2024-11-04 06:25:28,302] [pool-1-thread-7] Initializing /data/steve/TIFF/HAFF SEM:
[testng] [2024-11-04 06:25:30,522] [pool-1-thread-6] Initializing /data/steve/Gatan/Gatan (Sue D)/THE FLY 2:
[testng] [2024-11-04 06:25:31,597] [pool-1-thread-10] Initializing /data/steve/Molecular Imaging/Mol Imag v4.19 (Michael Z)/Wafer_vesicles_2min_010.STP:
[testng] [2024-11-04 06:25:33,301] [pool-1-thread-1] Initializing /data/steve/JEOL/WinSem (Sue)/BALLS.IMG:
[testng] [2024-11-04 06:25:36,080] [pool-1-thread-11] Initializing /data/steve/Gatan/Gatan (Sue D)/SEM 500X (Larry):
[testng] [2024-11-04 06:25:41,734] [pool-1-thread-5] Initializing /data/steve/RHK Tech/RHK (Bob Baker)/SCREEN1.PICT:
[testng] [2024-11-04 06:25:44,392] [pool-1-thread-2] Initializing /data/steve/JEOL/WinSem (Sue)/Shuttle tile ceramic/SHUTTLEC.IMG:
[testng] [2024-11-04 06:25:48,433] [pool-1-thread-6] Initializing /data/steve/Misc SXM test images/Fake STM/Fake STM (4 rpts) TIFF:
[testng] [2024-11-04 06:25:54,575] [pool-1-thread-12] Initializing /data/steve/JEOL/JSM (Inger Ekvell)/g11@0.IMG:
[testng] [2024-11-04 06:25:57,968] [pool-1-thread-10] Initializing /data/steve/JEOL/WinSem (Sue)/Shuttle tile ceramic/SHUTTLED.IMG:
[testng] [2024-11-04 06:26:06,485] [pool-1-thread-11] Initializing /data/steve/Zeiss LSM/Zeiss LSM (Ewald B)/NIALDIAN.TIF:
[testng]
[testng] ===============================================
[testng] Bio-Formats software test suite
[testng] Total tests run: 8480, Failures: 0, Skips: 0
[testng] ===============================================
[testng]
BUILD SUCCESSFUL
Total time: 50 minutes 46 seconds
Finished: SUCCESS