Started by upstream project "BIOFORMATS-test-repo" build number 247
originally caused by:
Started by upstream project "Trigger" build number 271
originally caused by:
Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@5
[BIOFORMATS-test-folder@5] $ /bin/bash -xe /tmp/jenkins9333838779890224431.sh
+ '[' gatan = slidebook ']'
++ date +%u
+ '[' 3 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_38827_merge_ci -v /uod/idr/repos/curated/gatan:/data -v /uod/idr-scratch/merge-ci/curated/gatan:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
[echo] isSnapshot = true
init-title:
[echo] ----------=========== bio-formats-testing-framework ===========----------
init-timestamp:
init:
copy-resources:
compile:
[resolver:resolve] Resolving artifacts
compile-tests:
[resolver:resolve] Resolving artifacts
[javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
[javac] warning: [options] bootstrap class path not set in conjunction with -source 8
[javac] 1 warning
test-automated:
[testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket
[testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket
[testng] File leak detector installed
[testng] 00:21:27,014 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
[testng] 00:21:27,015 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - No custom configurators were discovered as a service.
[testng] 00:21:27,015 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 00:21:27,016 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 00:21:27,016 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
[testng] 00:21:27,017 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
[testng] 00:21:27,017 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
[testng] 00:21:27,017 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 00:21:27,018 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 00:21:27,018 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
[testng] 00:21:27,019 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
[testng] 00:21:27,019 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
[testng] 00:21:27,181 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
[testng] 00:21:27,181 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
[testng] 00:21:27,202 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
[testng] 00:21:27,203 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
[testng] 00:21:27,208 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
[testng] 00:21:27,208 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
[testng] 00:21:27,208 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
[testng] 00:21:27,208 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
[testng] 00:21:27,208 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@2e3967ea - End of configuration.
[testng] 00:21:27,209 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@2e6a8155 - Registering current configuration as safe fallback point
[testng] 00:21:27,210 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 192 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
[testng] [2024-11-06 00:21:27,218] [main] java.version = 17.0.2
[testng] 00:21:27,221 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
[testng] 00:21:27,221 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:21:27,259 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-11-06_00-21-27.log]
[testng] 00:21:27,261 |-INFO in ch.qos.logback.core.sift.SiftProcessor@798162bc - End of configuration.
[testng] [2024-11-06 00:21:27,263] [main] testng.directory = /data
[testng] [2024-11-06 00:21:27,263] [main] testng.configDirectory = /config
[testng] [2024-11-06 00:21:27,271] [main] testng.multiplier = 1.0
[testng] [2024-11-06 00:21:27,272] [main] testng.in-memory = false
[testng] [2024-11-06 00:21:27,272] [main] testng.allow-missing = false
[testng] [2024-11-06 00:21:27,272] [main] user.language = en
[testng] [2024-11-06 00:21:27,272] [main] user.country = ${user.country}
[testng] [2024-11-06 00:21:27,272] [main] Maximum heap size = 15360 MB
[testng] Scanning for files...
[testng] [2024-11-06 00:21:34,306] [main] ----------------------------------------
[testng] [2024-11-06 00:21:34,306] [main] Total files: 103
[testng] [2024-11-06 00:21:34,307] [main] Scan time: 7.034 s (68 ms/file)
[testng] [2024-11-06 00:21:34,307] [main] ----------------------------------------
[testng] Building list of tests...
[testng] Ready to test 98 files
[testng] [TestNG] Running:
[testng] Bio-Formats software test suite
[testng]
[testng] [2024-11-06 00:21:50,761] [pool-1-thread-1] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-128x128.tif:
[testng] 00:21:50,761 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
[testng] 00:21:50,761 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:21:50,763 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-11-06_00-21-50.log]
[testng] 00:21:50,763 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3c76a064 - End of configuration.
[testng] [2024-11-06 00:21:52,414] [pool-1-thread-12] Initializing /data/melissa/annotation-test.tif:
[testng] 00:21:52,415 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
[testng] 00:21:52,415 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:21:52,416 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-11-06_00-21-52.log]
[testng] 00:21:52,416 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2bdda9ec - End of configuration.
[testng] [2024-11-06 00:21:53,086] [pool-1-thread-11] Initializing /data/jayne/AM-2/MonGb3-S1.dm3:
[testng] 00:21:53,087 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
[testng] 00:21:53,087 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:21:53,088 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-11-06_00-21-53.log]
[testng] 00:21:53,088 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1d840ec5 - End of configuration.
[testng] [2024-11-06 00:21:53,151] [pool-1-thread-10] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0005.dm4:
[testng] 00:21:53,151 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
[testng] 00:21:53,151 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:21:53,152 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-11-06_00-21-53.log]
[testng] 00:21:53,152 |-INFO in ch.qos.logback.core.sift.SiftProcessor@12d7eaf6 - End of configuration.
[testng] [2024-11-06 00:21:53,227] [pool-1-thread-9] Initializing /data/jay/dnasample1.dm3:
[testng] 00:21:53,228 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
[testng] 00:21:53,228 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:21:53,229 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-11-06_00-21-53.log]
[testng] 00:21:53,229 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5bf8f086 - End of configuration.
[testng] [2024-11-06 00:21:53,310] [pool-1-thread-8] Initializing /data/sindhu/cropped/JC76-G1-80000.0V-15000X-Sindhu-362-799x799.tif:
[testng] 00:21:53,310 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
[testng] 00:21:53,310 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:21:53,311 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-11-06_00-21-53.log]
[testng] 00:21:53,311 |-INFO in ch.qos.logback.core.sift.SiftProcessor@11205854 - End of configuration.
[testng] [2024-11-06 00:21:53,681] [pool-1-thread-7] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-363.dm3:
[testng] 00:21:53,681 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
[testng] 00:21:53,681 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:21:53,682 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-11-06_00-21-53.log]
[testng] 00:21:53,682 |-INFO in ch.qos.logback.core.sift.SiftProcessor@15d1621 - End of configuration.
[testng] [2024-11-06 00:21:53,742] [pool-1-thread-6] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0018.dm4:
[testng] 00:21:53,742 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
[testng] 00:21:53,742 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:21:53,743 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-11-06_00-21-53.log]
[testng] 00:21:53,743 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1da02012 - End of configuration.
[testng] [2024-11-06 00:21:53,805] [pool-1-thread-5] Initializing /data/qa-21652/E coli phage H2O_100000.0V_67000X.tif:
[testng] 00:21:53,805 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
[testng] 00:21:53,805 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:21:53,806 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-11-06_00-21-53.log]
[testng] 00:21:53,806 |-INFO in ch.qos.logback.core.sift.SiftProcessor@666d49aa - End of configuration.
[testng] [2024-11-06 00:21:54,188] [pool-1-thread-4] Initializing /data/ofra/lowloss.dm3:
[testng] 00:21:54,188 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
[testng] 00:21:54,188 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:21:54,188 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-11-06_00-21-54.log]
[testng] 00:21:54,189 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7499353d - End of configuration.
[testng] [2024-11-06 00:21:54,246] [pool-1-thread-3] Initializing /data/jay/biosamplefullframe.dm3:
[testng] 00:21:54,246 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
[testng] 00:21:54,246 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:21:54,247 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-11-06_00-21-54.log]
[testng] 00:21:54,247 |-INFO in ch.qos.logback.core.sift.SiftProcessor@37fa8409 - End of configuration.
[testng] [2024-11-06 00:21:54,307] [pool-1-thread-2] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0050.dm4:
[testng] 00:21:54,307 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
[testng] 00:21:54,307 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:21:54,308 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-11-06_00-21-54.log]
[testng] 00:21:54,308 |-INFO in ch.qos.logback.core.sift.SiftProcessor@de27ca - End of configuration.
[testng] [2024-11-06 00:21:57,139] [pool-1-thread-4] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-362.tif:
[testng] [2024-11-06 00:21:58,279] [pool-1-thread-6] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0048.dm4:
[testng] [2024-11-06 00:21:58,383] [pool-1-thread-10] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0051.dm4:
[testng] [2024-11-06 00:21:59,072] [pool-1-thread-9] Initializing /data/jay/recAmaghi.dm3:
[testng] [2024-11-06 00:21:59,164] [pool-1-thread-11] Initializing /data/nuno/Prefix_3VBSED_stack_30_slice_0290.dm3:
[testng] [2024-11-06 00:21:59,340] [pool-1-thread-3] Initializing /data/jay/DMtest2.dm3:
[testng] [2024-11-06 00:21:59,499] [pool-1-thread-7] Initializing /data/public/imagesc-36590/SmallMontage0008.dm4:
[testng] [2024-11-06 00:22:01,449] [pool-1-thread-1] Initializing /data/jay/camtest1.dm3:
[testng] [2024-11-06 00:22:01,543] [pool-1-thread-12] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0009.dm4:
[testng] [2024-11-06 00:22:01,630] [pool-1-thread-8] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0049.dm4:
[testng] [2024-11-06 00:22:01,794] [pool-1-thread-5] Initializing /data/jay/samples/APC2a-e4.tif:
[testng] [2024-11-06 00:22:02,734] [pool-1-thread-7] Initializing /data/jay/dnasample.tif:
[testng] [2024-11-06 00:22:05,195] [pool-1-thread-12] Initializing /data/jay/samples/APC2a-e5.dm3:
[testng] [2024-11-06 00:22:05,371] [pool-1-thread-9] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-26000X-Sindhu-364.tif:
[testng] [2024-11-06 00:22:05,833] [pool-1-thread-3] Initializing /data/melissa/annotation-test.dm3:
[testng] [2024-11-06 00:22:06,459] [pool-1-thread-1] Initializing /data/qa-7642/8.dm4:
[testng] [2024-11-06 00:22:06,822] [pool-1-thread-12] Initializing /data/public/EMPIAR/EMPIAR-10013/BGal_000438_frames.dm4:
[testng] [2024-11-06 00:22:07,029] [pool-1-thread-3] Initializing /data/sindhu/cropped/JC76-G1-80000.0V-15000X-Sindhu-362-1020x1020.tif:
[testng] [2024-11-06 00:22:08,360] [pool-1-thread-5] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-364.dm3:
[testng] [2024-11-06 00:22:08,540] [pool-1-thread-4] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0053.dm4:
[testng] [2024-11-06 00:22:08,673] [pool-1-thread-11] Initializing /data/qa-21647/Sample2_L1-0002.dm4:
[testng] [2024-11-06 00:22:09,964] [pool-1-thread-1] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0019.dm4:
[testng] [2024-11-06 00:22:10,851] [pool-1-thread-11] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0002.dm4:
[testng] [2024-11-06 00:22:11,700] [pool-1-thread-7] Initializing /data/jay/ViewDMtest.dm3:
[testng] [2024-11-06 00:22:11,893] [pool-1-thread-2] Initializing /data/public/imagesc-36590/SmallMontage0001.dm4:
[testng] [2024-11-06 00:22:12,118] [pool-1-thread-12] Initializing /data/jayne/AM-2/MonGb3-S3.dm3:
[testng] [2024-11-06 00:22:12,685] [pool-1-thread-1] Initializing /data/jay/samples/APC2a-e5.tif:
[testng] [2024-11-06 00:22:13,257] [pool-1-thread-3] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-364.tif:
[testng] [2024-11-06 00:22:13,997] [pool-1-thread-5] Initializing /data/ofra/Co on INT 28-12-10.11.dm3:
[testng] [2024-11-06 00:22:14,238] [pool-1-thread-11] Initializing /data/imagesc-3719/Prefix_BSE_slice_0001.dm4:
[testng] [2024-11-06 00:22:14,347] [pool-1-thread-9] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-480x480.tif:
[testng] [2024-11-06 00:22:15,241] [pool-1-thread-6] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0045.dm4:
[testng] [2024-11-06 00:22:15,383] [pool-1-thread-10] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0047.dm4:
[testng] [2024-11-06 00:22:15,502] [pool-1-thread-2] Initializing /data/public/imagesc-36590/SmallMontage0000.dm4:
[testng] [2024-11-06 00:22:16,224] [pool-1-thread-5] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-362-smaller.tif:
[testng] [2024-11-06 00:22:17,027] [pool-1-thread-8] Initializing /data/jay/samples/APC2a-e4.dm3:
[testng] [2024-11-06 00:22:17,636] [pool-1-thread-7] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0017.dm4:
[testng] [2024-11-06 00:22:17,758] [pool-1-thread-12] Initializing /data/jay/samples/APC2a-e3.tif:
[testng] [2024-11-06 00:22:18,391] [pool-1-thread-2] Initializing /data/qa-21652/E coli phage H2O_100000.0V_67000X.dm4:
[testng] [2024-11-06 00:22:19,488] [pool-1-thread-8] Initializing /data/jay/graphitedm3.dm3:
[testng] [2024-11-06 00:22:19,552] [pool-1-thread-1] Initializing /data/qa-21761/example.dm4:
[testng] [2024-11-06 00:22:20,105] [pool-1-thread-2] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-360.dm3:
[testng] [2024-11-06 00:22:20,933] [pool-1-thread-7] Initializing /data/jay/samples/APC2a-e3.dm3:
[testng] [2024-11-06 00:22:21,067] [pool-1-thread-9] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-96x96.tif:
[testng] [2024-11-06 00:22:23,237] [pool-1-thread-4] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0012.dm4:
[testng] [2024-11-06 00:22:23,534] [pool-1-thread-1] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0006.dm4:
[testng] [2024-11-06 00:22:24,104] [pool-1-thread-5] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0007.dm4:
[testng] [2024-11-06 00:22:24,668] [pool-1-thread-7] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0011.dm4:
[testng] [2024-11-06 00:22:24,786] [pool-1-thread-3] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-362.tif:
[testng] [2024-11-06 00:22:25,226] [pool-1-thread-12] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0004.dm4:
[testng] [2024-11-06 00:22:25,600] [pool-1-thread-8] Initializing /data/jay/Carbon.34.dm3:
[testng] [2024-11-06 00:22:25,902] [pool-1-thread-2] Initializing /data/samples/mode-metadata/mode_format_test.dm3:
[testng] [2024-11-06 00:22:26,078] [pool-1-thread-1] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0003.dm4:
[testng] [2024-11-06 00:22:26,197] [pool-1-thread-4] Initializing /data/public/imagesc-36590/SmallMontage0003.dm4:
[testng] [2024-11-06 00:22:26,760] [pool-1-thread-5] Initializing /data/jayne/AM-2/MonGb2-S8.dm3:
[testng] [2024-11-06 00:22:27,589] [pool-1-thread-11] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0016.dm4:
[testng] [2024-11-06 00:22:27,983] [pool-1-thread-7] Initializing /data/public/imagesc-36590/SmallMontage0006.dm4:
[testng] [2024-11-06 00:22:28,099] [pool-1-thread-9] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-360.tif:
[testng] [2024-11-06 00:22:28,445] [pool-1-thread-12] Initializing /data/public/imagesc-36590/SmallMontage0002.dm4:
[testng] [2024-11-06 00:22:28,541] [pool-1-thread-4] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0052.dm4:
[testng] [2024-11-06 00:22:29,128] [pool-1-thread-1] Initializing /data/thorsten/60kx_HAADF_03.dm3:
[testng] [2024-11-06 00:22:29,437] [pool-1-thread-6] Initializing /data/qa-11392/Example_Gatan_File.dm4:
[testng] [2024-11-06 00:22:30,097] [pool-1-thread-7] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0008.dm4:
[testng] [2024-11-06 00:22:30,174] [pool-1-thread-10] Initializing /data/samples/test-tiles.dm3:
[testng] [2024-11-06 00:22:30,313] [pool-1-thread-11] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0000.dm4:
[testng] [2024-11-06 00:22:30,384] [pool-1-thread-12] Initializing /data/public/imagesc-36590/SmallMontage0007.dm4:
[testng] [2024-11-06 00:22:30,491] [pool-1-thread-8] Initializing /data/jayne/AM-2/MonGb2-S7.dm3:
[testng] [2024-11-06 00:22:30,580] [pool-1-thread-2] Initializing /data/qa-8007/Prefix_3VBSED_slice_0011.dm3:
[testng] [2024-11-06 00:22:30,951] [pool-1-thread-5] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0001.dm4:
[testng] [2024-11-06 00:22:31,441] [pool-1-thread-1] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0015.dm4:
[testng] [2024-11-06 00:22:31,691] [pool-1-thread-10] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0014.dm4:
[testng] [2024-11-06 00:22:32,082] [pool-1-thread-12] Initializing /data/jay/recAmag6500dm.dm3:
[testng] [2024-11-06 00:22:32,580] [pool-1-thread-2] Initializing /data/chip/Nanogold-1.dm3:
[testng] [2024-11-06 00:22:32,714] [pool-1-thread-3] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0013.dm4:
[testng] [2024-11-06 00:22:32,859] [pool-1-thread-7] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-360.tif:
[testng] [2024-11-06 00:22:33,194] [pool-1-thread-11] Initializing /data/jay/smallerfile.dm3:
[testng] [2024-11-06 00:22:33,503] [pool-1-thread-5] Initializing /data/imagesc-3719/Heart_BSE_slice_0019.dm4:
[testng] [2024-11-06 00:22:34,000] [pool-1-thread-1] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-256x256.tif:
[testng] [2024-11-06 00:22:34,440] [pool-1-thread-10] Initializing /data/public/imagesc-36590/SmallMontage0005.dm4:
[testng] [2024-11-06 00:22:34,532] [pool-1-thread-8] Initializing /data/jay/DMtest.dm3:
[testng] [2024-11-06 00:22:35,121] [pool-1-thread-11] Initializing /data/jay/biosamplefullframetif.tif:
[testng] [2024-11-06 00:22:36,146] [pool-1-thread-3] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0046.dm4:
[testng] [2024-11-06 00:22:36,419] [pool-1-thread-12] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0010.dm4:
[testng] [2024-11-06 00:22:36,734] [pool-1-thread-10] Initializing /data/public/imagesc-36590/SmallMontage0004.dm4:
[testng] [2024-11-06 00:22:36,856] [pool-1-thread-9] Initializing /data/jayne/AM-2/MonGb2-S9.dm3:
[testng] [2024-11-06 00:22:38,359] [pool-1-thread-10] Initializing /data/nuno/Prefix_3VBSED_slice_0011.dm3:
[testng]
[testng] ===============================================
[testng] Bio-Formats software test suite
[testng] Total tests run: 5194, Failures: 0, Skips: 0
[testng] ===============================================
[testng]
BUILD SUCCESSFUL
Total time: 1 minute 26 seconds
Finished: SUCCESS