Started by upstream project "BIOFORMATS-test-repo" build number 249
originally caused by:
 Started by upstream project "Trigger" build number 273
 originally caused by:
  Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@3
[BIOFORMATS-test-folder@3] $ /bin/bash -xe /tmp/jenkins13711709429308976562.sh
+ '[' pcx = slidebook ']'
++ date +%u
+ '[' 5 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_39153_merge_ci -v /uod/idr/repos/curated/pcx:/data -v /uod/idr-scratch/merge-ci/curated/pcx:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
     [echo] isSnapshot = true

init-title:
     [echo] ----------=========== bio-formats-testing-framework ===========----------

init-timestamp:

init:

copy-resources:

compile:
[resolver:resolve] Resolving artifacts

compile-tests:
[resolver:resolve] Resolving artifacts
    [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test

test-automated:
   [testng] File leak detector installed
   [testng] 00:21:33,332 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
   [testng] 00:21:33,333 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - No custom configurators were discovered as a service.
   [testng] 00:21:33,333 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 00:21:33,334 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 00:21:33,335 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
   [testng] 00:21:33,335 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
   [testng] 00:21:33,335 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
   [testng] 00:21:33,335 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 00:21:33,336 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 00:21:33,336 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
   [testng] 00:21:33,336 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
   [testng] 00:21:33,336 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
   [testng] 00:21:33,558 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
   [testng] 00:21:33,558 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
   [testng] 00:21:33,592 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
   [testng] 00:21:33,592 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
   [testng] 00:21:33,601 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
   [testng] 00:21:33,602 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
   [testng] 00:21:33,602 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
   [testng] 00:21:33,602 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
   [testng] 00:21:33,602 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@7a69b07 - End of configuration.
   [testng] 00:21:33,603 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@636be97c - Registering current configuration as safe fallback point
   [testng] 00:21:33,603 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 267 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
   [testng] [2024-11-08 00:21:33,613] [main] java.version = 1.8.0_342
   [testng] 00:21:33,616 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
   [testng] 00:21:33,616 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 00:21:33,661 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-11-08_00-21-33.log]
   [testng] 00:21:33,662 |-INFO in ch.qos.logback.core.sift.SiftProcessor@13c9d689 - End of configuration.
   [testng] [2024-11-08 00:21:33,664] [main] testng.directory = /data
   [testng] [2024-11-08 00:21:33,664] [main] testng.configDirectory = /config
   [testng] [2024-11-08 00:21:33,676] [main] testng.multiplier = 1.0
   [testng] [2024-11-08 00:21:33,676] [main] testng.in-memory = false
   [testng] [2024-11-08 00:21:33,676] [main] testng.allow-missing = false
   [testng] [2024-11-08 00:21:33,676] [main] user.language = en
   [testng] [2024-11-08 00:21:33,676] [main] user.country = ${user.country}
   [testng] [2024-11-08 00:21:33,676] [main] Maximum heap size = 13653 MB
   [testng] Scanning for files...
   [testng] [2024-11-08 00:21:34,444] [main] ----------------------------------------
   [testng] [2024-11-08 00:21:34,444] [main] Total files: 36
   [testng] [2024-11-08 00:21:34,444] [main] Scan time: 0.768 s (21 ms/file)
   [testng] [2024-11-08 00:21:34,444] [main] ----------------------------------------
   [testng] Building list of tests...
   [testng] Ready to test 35 files
   [testng] [TestNG] Running:
   [testng]   Bio-Formats software test suite
   [testng] 
   [testng] [2024-11-08 00:21:36,566] [pool-1-thread-1] Initializing /data/generated/mri-stack12.pcx: 
   [testng] 00:21:36,566 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
   [testng] 00:21:36,567 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 00:21:36,567 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-11-08_00-21-36.log]
   [testng] 00:21:36,568 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6d838507 - End of configuration.
   [testng] [2024-11-08 00:21:36,641] [pool-1-thread-12] Initializing /data/josh/Screenshots/fv1000color.pcx: 
   [testng] 00:21:36,641 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
   [testng] 00:21:36,641 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 00:21:36,642 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-11-08_00-21-36.log]
   [testng] 00:21:36,642 |-INFO in ch.qos.logback.core.sift.SiftProcessor@56548515 - End of configuration.
   [testng] [2024-11-08 00:21:36,662] [pool-1-thread-11] Initializing /data/generated/mri-stack16.pcx: 
   [testng] 00:21:36,662 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
   [testng] 00:21:36,662 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 00:21:36,663 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-11-08_00-21-36.log]
   [testng] 00:21:36,663 |-INFO in ch.qos.logback.core.sift.SiftProcessor@10f2d91d - End of configuration.
   [testng] [2024-11-08 00:21:36,677] [pool-1-thread-10] Initializing /data/generated/mri-stack4.pcx: 
   [testng] 00:21:36,677 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
   [testng] 00:21:36,678 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 00:21:36,678 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-11-08_00-21-36.log]
   [testng] 00:21:36,679 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5382370 - End of configuration.
   [testng] [2024-11-08 00:21:36,694] [pool-1-thread-9] Initializing /data/generated/mri-stack6.pcx: 
   [testng] 00:21:36,694 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
   [testng] 00:21:36,694 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 00:21:36,695 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-11-08_00-21-36.log]
   [testng] 00:21:36,695 |-INFO in ch.qos.logback.core.sift.SiftProcessor@38c494a9 - End of configuration.
   [testng] [2024-11-08 00:21:36,711] [pool-1-thread-8] Initializing /data/generated/mri-stack10.pcx: 
   [testng] 00:21:36,711 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
   [testng] 00:21:36,711 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 00:21:36,711 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-11-08_00-21-36.log]
   [testng] 00:21:36,712 |-INFO in ch.qos.logback.core.sift.SiftProcessor@37954796 - End of configuration.
   [testng] [2024-11-08 00:21:36,725] [pool-1-thread-7] Initializing /data/josh/Screenshots/slidebooksamezposition.pcx: 
   [testng] 00:21:36,725 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
   [testng] 00:21:36,725 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 00:21:36,725 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-11-08_00-21-36.log]
   [testng] 00:21:36,726 |-INFO in ch.qos.logback.core.sift.SiftProcessor@66983719 - End of configuration.
   [testng] [2024-11-08 00:21:36,743] [pool-1-thread-6] Initializing /data/generated/mri-stack3.pcx: 
   [testng] 00:21:36,744 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
   [testng] 00:21:36,744 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 00:21:36,744 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-11-08_00-21-36.log]
   [testng] 00:21:36,745 |-INFO in ch.qos.logback.core.sift.SiftProcessor@330e82a4 - End of configuration.
   [testng] [2024-11-08 00:21:36,756] [pool-1-thread-5] Initializing /data/generated/mri-stack14.pcx: 
   [testng] 00:21:36,756 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
   [testng] 00:21:36,756 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 00:21:36,757 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-11-08_00-21-36.log]
   [testng] 00:21:36,757 |-INFO in ch.qos.logback.core.sift.SiftProcessor@877dac4 - End of configuration.
   [testng] [2024-11-08 00:21:36,771] [pool-1-thread-4] Initializing /data/generated/mri-stack19.pcx: 
   [testng] 00:21:36,771 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
   [testng] 00:21:36,771 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 00:21:36,771 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-11-08_00-21-36.log]
   [testng] 00:21:36,772 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7e8baa8a - End of configuration.
   [testng] [2024-11-08 00:21:36,780] [pool-1-thread-3] Initializing /data/generated/mri-stack17.pcx: 
   [testng] 00:21:36,780 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
   [testng] 00:21:36,780 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 00:21:36,781 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-11-08_00-21-36.log]
   [testng] 00:21:36,781 |-INFO in ch.qos.logback.core.sift.SiftProcessor@39d58301 - End of configuration.
   [testng] [2024-11-08 00:21:36,789] [pool-1-thread-2] Initializing /data/generated/mri-stack7.pcx: 
   [testng] 00:21:36,790 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
   [testng] 00:21:36,790 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 00:21:36,790 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-11-08_00-21-36.log]
   [testng] 00:21:36,790 |-INFO in ch.qos.logback.core.sift.SiftProcessor@56f78f24 - End of configuration.
   [testng] [2024-11-08 00:21:39,954] [pool-1-thread-8] Initializing /data/generated/mri-stack22.pcx: 
   [testng] [2024-11-08 00:21:39,963] [pool-1-thread-11] Initializing /data/generated/mri-stack2.pcx: 
   [testng] [2024-11-08 00:21:39,981] [pool-1-thread-6] Initializing /data/generated/mri-stack18.pcx: 
   [testng] [2024-11-08 00:21:39,999] [pool-1-thread-4] Initializing /data/josh/Screenshots/leica-lif.pcx: 
   [testng] [2024-11-08 00:21:40,026] [pool-1-thread-3] Initializing /data/generated/mri-stack15.pcx: 
   [testng] [2024-11-08 00:21:40,034] [pool-1-thread-10] Initializing /data/josh/Screenshots/nd2 color.pcx: 
   [testng] [2024-11-08 00:21:40,045] [pool-1-thread-12] Initializing /data/generated/mri-stack0.pcx: 
   [testng] [2024-11-08 00:21:40,054] [pool-1-thread-7] Initializing /data/generated/mri-stack23.pcx: 
   [testng] [2024-11-08 00:21:40,063] [pool-1-thread-5] Initializing /data/generated/mri-stack20.pcx: 
   [testng] [2024-11-08 00:21:40,077] [pool-1-thread-1] Initializing /data/josh/Screenshots/Metamorph image-stack.pcx: 
   [testng] [2024-11-08 00:21:40,092] [pool-1-thread-9] Initializing /data/generated/mri-stack9.pcx: 
   [testng] [2024-11-08 00:21:40,102] [pool-1-thread-2] Initializing /data/generated/mri-stack26.pcx: 
   [testng] [2024-11-08 00:21:41,097] [pool-1-thread-8] Initializing /data/generated/mri-stack21.pcx: 
   [testng] [2024-11-08 00:21:41,119] [pool-1-thread-9] Initializing /data/generated/mri-stack24.pcx: 
   [testng] [2024-11-08 00:21:41,159] [pool-1-thread-11] Initializing /data/generated/mri-stack8.pcx: 
   [testng] [2024-11-08 00:21:41,217] [pool-1-thread-2] Initializing /data/generated/mri-stack25.pcx: 
   [testng] [2024-11-08 00:21:41,247] [pool-1-thread-6] Initializing /data/generated/mri-stack13.pcx: 
   [testng] [2024-11-08 00:21:41,272] [pool-1-thread-12] Initializing /data/josh/Screenshots/biorad color off.pcx: 
   [testng] [2024-11-08 00:21:41,302] [pool-1-thread-5] Initializing /data/generated/mri-stack5.pcx: 
   [testng] [2024-11-08 00:21:41,329] [pool-1-thread-7] Initializing /data/josh/Screenshots/deltavision.pcx: 
   [testng] [2024-11-08 00:21:41,346] [pool-1-thread-3] Initializing /data/generated/mri-stack11.pcx: 
   [testng] [2024-11-08 00:21:41,734] [pool-1-thread-4] Initializing /data/josh/Screenshots/epscolor.pcx: 
   [testng] [2024-11-08 00:21:41,775] [pool-1-thread-11] Initializing /data/generated/mri-stack1.pcx: 
   [testng] 
   [testng] ===============================================
   [testng] Bio-Formats software test suite
   [testng] Total tests run: 1855, Failures: 0, Skips: 0
   [testng] ===============================================
   [testng] 

BUILD SUCCESSFUL
Total time: 11 seconds
Finished: SUCCESS