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Started by upstream project "BIOFORMATS-test-repo" build number 250 originally caused by: Started by upstream project "Trigger" build number 274 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@5 [BIOFORMATS-test-folder@5] $ /bin/bash -xe /tmp/jenkins10928678992190089676.sh + '[' gatan = slidebook ']' ++ date +%u + '[' 6 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_39319_merge_ci -v /uod/idr/repos/curated/gatan:/data -v /uod/idr-scratch/merge-ci/curated/gatan:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] 1 warning test-automated: [testng] WARNING: An illegal reflective access operation has occurred [testng] WARNING: Illegal reflective access by org.kohsuke.file_leak_detector.Listener (file:/home/build/.m2/repository/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar) to field java.net.SocketImpl.socket [testng] WARNING: Please consider reporting this to the maintainers of org.kohsuke.file_leak_detector.Listener [testng] WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations [testng] WARNING: All illegal access operations will be denied in a future release [testng] File leak detector installed [testng] 00:21:58,361 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 00:21:58,363 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - No custom configurators were discovered as a service. [testng] 00:21:58,363 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 00:21:58,364 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 00:21:58,364 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 00:21:58,365 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 00:21:58,365 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 00:21:58,365 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 00:21:58,366 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 00:21:58,366 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 00:21:58,367 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 00:21:58,367 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 00:21:58,558 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 00:21:58,558 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 00:21:58,585 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 00:21:58,585 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 00:21:58,591 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 00:21:58,591 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 00:21:58,591 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 00:21:58,591 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 00:21:58,591 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@45099dd3 - End of configuration. [testng] 00:21:58,592 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@60099951 - Registering current configuration as safe fallback point [testng] 00:21:58,592 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 226 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-11-09 00:21:58,602] [main] java.version = 11.0.16 [testng] 00:21:58,605 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 00:21:58,605 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:21:58,648 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-11-09_00-21-58.log] [testng] 00:21:58,650 |-INFO in ch.qos.logback.core.sift.SiftProcessor@21be3395 - End of configuration. [testng] [2024-11-09 00:21:58,652] [main] testng.directory = /data [testng] [2024-11-09 00:21:58,652] [main] testng.configDirectory = /config [testng] [2024-11-09 00:21:58,661] [main] testng.multiplier = 1.0 [testng] [2024-11-09 00:21:58,662] [main] testng.in-memory = false [testng] [2024-11-09 00:21:58,663] [main] testng.allow-missing = false [testng] [2024-11-09 00:21:58,663] [main] user.language = en [testng] [2024-11-09 00:21:58,663] [main] user.country = ${user.country} [testng] [2024-11-09 00:21:58,663] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2024-11-09 00:22:05,360] [main] ---------------------------------------- [testng] [2024-11-09 00:22:05,360] [main] Total files: 103 [testng] [2024-11-09 00:22:05,360] [main] Scan time: 6.697 s (65 ms/file) [testng] [2024-11-09 00:22:05,360] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 98 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-11-09 00:22:26,663] [pool-1-thread-1] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-364.dm3: [testng] 00:22:26,664 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 00:22:26,664 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:22:26,666 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-11-09_00-22-26.log] [testng] 00:22:26,666 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7cb2c34b - End of configuration. [testng] [2024-11-09 00:22:26,760] [pool-1-thread-12] Initializing /data/jay/smallerfile.dm3: [testng] 00:22:26,761 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 00:22:26,761 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:22:26,783 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-11-09_00-22-26.log] [testng] 00:22:26,783 |-INFO in ch.qos.logback.core.sift.SiftProcessor@625d44db - End of configuration. [testng] [2024-11-09 00:22:26,895] [pool-1-thread-11] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-96x96.tif: [testng] 00:22:26,895 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 00:22:26,895 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:22:26,896 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-11-09_00-22-26.log] [testng] 00:22:26,896 |-INFO in ch.qos.logback.core.sift.SiftProcessor@42344517 - End of configuration. [testng] [2024-11-09 00:22:27,440] [pool-1-thread-10] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0001.dm4: [testng] 00:22:27,440 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 00:22:27,441 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:22:27,441 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-11-09_00-22-27.log] [testng] 00:22:27,441 |-INFO in ch.qos.logback.core.sift.SiftProcessor@61caa8d7 - End of configuration. [testng] [2024-11-09 00:22:27,495] [pool-1-thread-9] Initializing /data/jay/biosamplefullframe.dm3: [testng] 00:22:27,495 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 00:22:27,495 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:22:27,496 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-11-09_00-22-27.log] [testng] 00:22:27,496 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7b531779 - End of configuration. [testng] [2024-11-09 00:22:27,573] [pool-1-thread-8] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-363.dm3: [testng] 00:22:27,573 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 00:22:27,573 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:22:27,573 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-11-09_00-22-27.log] [testng] 00:22:27,574 |-INFO in ch.qos.logback.core.sift.SiftProcessor@c88d79d - End of configuration. [testng] [2024-11-09 00:22:27,687] [pool-1-thread-7] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-26000X-Sindhu-364.tif: [testng] 00:22:27,687 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 00:22:27,687 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:22:27,688 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-11-09_00-22-27.log] [testng] 00:22:27,688 |-INFO in ch.qos.logback.core.sift.SiftProcessor@36ab2a2a - End of configuration. [testng] [2024-11-09 00:22:28,340] [pool-1-thread-6] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0014.dm4: [testng] 00:22:28,340 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 00:22:28,340 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:22:28,341 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-11-09_00-22-28.log] [testng] 00:22:28,341 |-INFO in ch.qos.logback.core.sift.SiftProcessor@93d1b98 - End of configuration. [testng] [2024-11-09 00:22:28,446] [pool-1-thread-5] Initializing /data/public/imagesc-36590/SmallMontage0008.dm4: [testng] 00:22:28,446 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 00:22:28,446 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:22:28,447 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-11-09_00-22-28.log] [testng] 00:22:28,447 |-INFO in ch.qos.logback.core.sift.SiftProcessor@37ba8f6a - End of configuration. [testng] [2024-11-09 00:22:28,527] [pool-1-thread-4] Initializing /data/melissa/annotation-test.tif: [testng] 00:22:28,527 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 00:22:28,527 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:22:28,528 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-11-09_00-22-28.log] [testng] 00:22:28,528 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2bce9cdc - End of configuration. [testng] [2024-11-09 00:22:28,964] [pool-1-thread-3] Initializing /data/jay/Carbon.34.dm3: [testng] 00:22:28,964 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 00:22:28,965 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:22:28,965 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-11-09_00-22-28.log] [testng] 00:22:28,965 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4fa3eb9b - End of configuration. [testng] [2024-11-09 00:22:29,027] [pool-1-thread-2] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0046.dm4: [testng] 00:22:29,027 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 00:22:29,027 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:22:29,028 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-11-09_00-22-29.log] [testng] 00:22:29,028 |-INFO in ch.qos.logback.core.sift.SiftProcessor@10033bd5 - End of configuration. [testng] [2024-11-09 00:22:32,323] [pool-1-thread-5] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0017.dm4: [testng] [2024-11-09 00:22:32,680] [pool-1-thread-12] Initializing /data/samples/mode-metadata/mode_format_test.dm3: [testng] [2024-11-09 00:22:33,311] [pool-1-thread-6] Initializing /data/public/EMPIAR/EMPIAR-10013/BGal_000438_frames.dm4: [testng] [2024-11-09 00:22:33,408] [pool-1-thread-10] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0047.dm4: [testng] [2024-11-09 00:22:35,608] [pool-1-thread-11] Initializing /data/jay/dnasample.tif: [testng] [2024-11-09 00:22:36,378] [pool-1-thread-4] Initializing /data/imagesc-3719/Heart_BSE_slice_0019.dm4: [testng] [2024-11-09 00:22:36,702] [pool-1-thread-9] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0019.dm4: [testng] [2024-11-09 00:22:36,783] [pool-1-thread-3] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0005.dm4: [testng] [2024-11-09 00:22:36,881] [pool-1-thread-8] Initializing /data/jay/DMtest2.dm3: [testng] [2024-11-09 00:22:36,980] [pool-1-thread-5] Initializing /data/public/imagesc-36590/SmallMontage0004.dm4: [testng] [2024-11-09 00:22:37,213] [pool-1-thread-1] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0045.dm4: [testng] [2024-11-09 00:22:37,348] [pool-1-thread-12] Initializing /data/jay/recAmaghi.dm3: [testng] [2024-11-09 00:22:39,554] [pool-1-thread-5] Initializing /data/jay/ViewDMtest.dm3: [testng] [2024-11-09 00:22:39,809] [pool-1-thread-7] Initializing /data/jay/samples/APC2a-e3.dm3: [testng] [2024-11-09 00:22:40,198] [pool-1-thread-6] Initializing /data/samples/test-tiles.dm3: [testng] [2024-11-09 00:22:40,584] [pool-1-thread-3] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0016.dm4: [testng] [2024-11-09 00:22:40,730] [pool-1-thread-9] Initializing /data/qa-21647/Sample2_L1-0002.dm4: [testng] [2024-11-09 00:22:42,037] [pool-1-thread-6] Initializing /data/nuno/Prefix_3VBSED_slice_0011.dm3: [testng] [2024-11-09 00:22:42,272] [pool-1-thread-7] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-256x256.tif: [testng] [2024-11-09 00:22:42,642] [pool-1-thread-8] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-362.tif: [testng] [2024-11-09 00:22:43,225] [pool-1-thread-4] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-360.dm3: [testng] [2024-11-09 00:22:43,636] [pool-1-thread-3] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0049.dm4: [testng] [2024-11-09 00:22:43,809] [pool-1-thread-12] Initializing /data/public/imagesc-36590/SmallMontage0006.dm4: [testng] [2024-11-09 00:22:43,927] [pool-1-thread-9] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0015.dm4: [testng] [2024-11-09 00:22:44,695] [pool-1-thread-5] Initializing /data/jayne/AM-2/MonGb3-S1.dm3: [testng] [2024-11-09 00:22:45,392] [pool-1-thread-6] Initializing /data/imagesc-3719/Prefix_BSE_slice_0001.dm4: [testng] [2024-11-09 00:22:46,617] [pool-1-thread-12] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0051.dm4: [testng] [2024-11-09 00:22:46,832] [pool-1-thread-11] Initializing /data/jayne/AM-2/MonGb2-S7.dm3: [testng] [2024-11-09 00:22:48,694] [pool-1-thread-9] Initializing /data/jay/samples/APC2a-e3.tif: [testng] [2024-11-09 00:22:50,548] [pool-1-thread-2] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-360.tif: [testng] [2024-11-09 00:22:52,122] [pool-1-thread-4] Initializing /data/melissa/annotation-test.dm3: [testng] [2024-11-09 00:22:52,456] [pool-1-thread-7] Initializing /data/sindhu/cropped/JC76-G1-80000.0V-15000X-Sindhu-362-1020x1020.tif: [testng] [2024-11-09 00:22:53,672] [pool-1-thread-10] Initializing /data/nuno/Prefix_3VBSED_stack_30_slice_0290.dm3: [testng] [2024-11-09 00:22:54,730] [pool-1-thread-5] Initializing /data/ofra/lowloss.dm3: [testng] [2024-11-09 00:22:55,978] [pool-1-thread-1] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0050.dm4: [testng] [2024-11-09 00:22:56,578] [pool-1-thread-4] Initializing /data/qa-8007/Prefix_3VBSED_slice_0011.dm3: [testng] [2024-11-09 00:22:57,154] [pool-1-thread-11] Initializing /data/jay/recAmag6500dm.dm3: [testng] [2024-11-09 00:22:58,475] [pool-1-thread-5] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0013.dm4: [testng] [2024-11-09 00:23:00,840] [pool-1-thread-8] Initializing /data/jay/graphitedm3.dm3: [testng] [2024-11-09 00:23:01,213] [pool-1-thread-4] Initializing /data/public/imagesc-36590/SmallMontage0007.dm4: [testng] [2024-11-09 00:23:01,554] [pool-1-thread-3] Initializing /data/jay/biosamplefullframetif.tif: [testng] [2024-11-09 00:23:03,389] [pool-1-thread-12] Initializing /data/qa-11392/Example_Gatan_File.dm4: [testng] [2024-11-09 00:23:04,085] [pool-1-thread-11] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-360.tif: [testng] [2024-11-09 00:23:05,491] [pool-1-thread-9] Initializing /data/jay/dnasample1.dm3: [testng] [2024-11-09 00:23:05,752] [pool-1-thread-10] Initializing /data/sindhu/cropped/JC76-G1-80000.0V-15000X-Sindhu-362-799x799.tif: [testng] [2024-11-09 00:23:07,293] [pool-1-thread-6] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0008.dm4: [testng] [2024-11-09 00:23:07,554] [pool-1-thread-5] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0002.dm4: [testng] [2024-11-09 00:23:08,393] [pool-1-thread-7] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0003.dm4: [testng] [2024-11-09 00:23:09,221] [pool-1-thread-4] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0007.dm4: [testng] [2024-11-09 00:23:09,512] [pool-1-thread-2] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-362.tif: [testng] [2024-11-09 00:23:11,428] [pool-1-thread-1] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0000.dm4: [testng] [2024-11-09 00:23:11,995] [pool-1-thread-8] Initializing /data/qa-21652/E coli phage H2O_100000.0V_67000X.tif: [testng] [2024-11-09 00:23:14,127] [pool-1-thread-6] Initializing /data/jayne/AM-2/MonGb3-S3.dm3: [testng] [2024-11-09 00:23:14,405] [pool-1-thread-9] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0053.dm4: [testng] [2024-11-09 00:23:14,798] [pool-1-thread-7] Initializing /data/jay/samples/APC2a-e5.dm3: [testng] [2024-11-09 00:23:15,050] [pool-1-thread-5] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0012.dm4: [testng] [2024-11-09 00:23:16,074] [pool-1-thread-4] Initializing /data/public/imagesc-36590/SmallMontage0002.dm4: [testng] [2024-11-09 00:23:16,453] [pool-1-thread-1] Initializing /data/thorsten/60kx_HAADF_03.dm3: [testng] [2024-11-09 00:23:18,502] [pool-1-thread-7] Initializing /data/qa-7642/8.dm4: [testng] [2024-11-09 00:23:19,273] [pool-1-thread-5] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0052.dm4: [testng] [2024-11-09 00:23:19,721] [pool-1-thread-6] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0048.dm4: [testng] [2024-11-09 00:23:19,984] [pool-1-thread-4] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-128x128.tif: [testng] [2024-11-09 00:23:21,803] [pool-1-thread-1] Initializing /data/public/imagesc-36590/SmallMontage0005.dm4: [testng] [2024-11-09 00:23:22,031] [pool-1-thread-10] Initializing /data/qa-21761/example.dm4: [testng] [2024-11-09 00:23:22,255] [pool-1-thread-3] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0004.dm4: [testng] [2024-11-09 00:23:22,527] [pool-1-thread-12] Initializing /data/jayne/AM-2/MonGb2-S8.dm3: [testng] [2024-11-09 00:23:24,396] [pool-1-thread-11] Initializing /data/public/imagesc-36590/SmallMontage0003.dm4: [testng] [2024-11-09 00:23:25,557] [pool-1-thread-8] Initializing /data/jay/samples/APC2a-e4.tif: [testng] [2024-11-09 00:23:27,070] [pool-1-thread-7] Initializing /data/qa-21652/E coli phage H2O_100000.0V_67000X.dm4: [testng] [2024-11-09 00:23:27,343] [pool-1-thread-1] Initializing /data/jayne/AM-2/MonGb2-S9.dm3: [testng] [2024-11-09 00:23:27,876] [pool-1-thread-10] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0011.dm4: [testng] [2024-11-09 00:23:28,446] [pool-1-thread-2] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0010.dm4: [testng] [2024-11-09 00:23:28,895] [pool-1-thread-3] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-480x480.tif: [testng] [2024-11-09 00:23:30,815] [pool-1-thread-9] Initializing /data/jay/camtest1.dm3: [testng] [2024-11-09 00:23:31,051] [pool-1-thread-11] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-362-smaller.tif: [testng] [2024-11-09 00:23:32,527] [pool-1-thread-12] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0009.dm4: [testng] [2024-11-09 00:23:33,556] [pool-1-thread-7] Initializing /data/jay/samples/APC2a-e4.dm3: [testng] [2024-11-09 00:23:34,539] [pool-1-thread-10] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-364.tif: [testng] [2024-11-09 00:23:36,018] [pool-1-thread-2] Initializing /data/public/imagesc-36590/SmallMontage0001.dm4: [testng] [2024-11-09 00:23:36,498] [pool-1-thread-5] Initializing /data/chip/Nanogold-1.dm3: [testng] [2024-11-09 00:23:37,085] [pool-1-thread-4] Initializing /data/jay/DMtest.dm3: [testng] [2024-11-09 00:23:37,469] [pool-1-thread-1] Initializing /data/ofra/Co on INT 28-12-10.11.dm3: [testng] [2024-11-09 00:23:38,395] [pool-1-thread-12] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0006.dm4: [testng] [2024-11-09 00:23:38,733] [pool-1-thread-6] Initializing /data/public/imagesc-36590/SmallMontage0000.dm4: [testng] [2024-11-09 00:23:39,023] [pool-1-thread-7] Initializing /data/jay/samples/APC2a-e5.tif: [testng] [2024-11-09 00:23:40,878] [pool-1-thread-9] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0018.dm4: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 5194, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 1 minute 54 seconds Finished: SUCCESS