Started by upstream project "BIOFORMATS-test-repo" build number 252 originally caused by: Started by upstream project "Trigger" build number 276 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@10 [BIOFORMATS-test-folder@10] $ /bin/bash -xe /tmp/jenkins1907738033717273985.sh + '[' zeiss-tiff = slidebook ']' ++ date +%u + '[' 1 -le 1 ']' + DOCKER_ARGS='-Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR' + sudo docker run --rm --name BIOFORMATS-test-folder_39773_merge_ci -v /uod/idr/repos/curated/zeiss-tiff:/data -v /uod/idr-scratch/merge-ci/curated/zeiss-tiff:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test test-automated: [testng] File leak detector installed [testng] 04:22:55,553 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 04:22:55,555 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - No custom configurators were discovered as a service. [testng] 04:22:55,555 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 04:22:55,557 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 04:22:55,557 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 04:22:55,557 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 04:22:55,558 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 04:22:55,558 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 04:22:55,558 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 04:22:55,559 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 04:22:55,559 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 04:22:55,559 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 04:22:55,781 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 04:22:55,782 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 04:22:55,811 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 04:22:55,811 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 04:22:55,819 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 04:22:55,819 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 04:22:55,819 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 04:22:55,819 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 04:22:55,819 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@7a69b07 - End of configuration. [testng] 04:22:55,820 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@636be97c - Registering current configuration as safe fallback point [testng] 04:22:55,820 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 262 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-11-11 04:22:55,830] [main] java.version = 1.8.0_342 [testng] 04:22:55,833 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 04:22:55,833 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:22:55,878 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-11-11_04-22-55.log] [testng] 04:22:55,879 |-INFO in ch.qos.logback.core.sift.SiftProcessor@13c9d689 - End of configuration. [testng] [2024-11-11 04:22:55,881] [main] testng.directory = /data [testng] [2024-11-11 04:22:55,881] [main] testng.configDirectory = /config [testng] [2024-11-11 04:22:55,893] [main] testng.multiplier = 1.0 [testng] [2024-11-11 04:22:55,893] [main] testng.in-memory = false [testng] [2024-11-11 04:22:55,893] [main] testng.allow-missing = false [testng] [2024-11-11 04:22:55,893] [main] user.language = fr [testng] [2024-11-11 04:22:55,893] [main] user.country = FR [testng] [2024-11-11 04:22:55,894] [main] Maximum heap size = 13653 MB [testng] Scanning for files... [testng] [2024-11-11 04:25:52,177] [main] ---------------------------------------- [testng] [2024-11-11 04:25:52,178] [main] Total files: 15735 [testng] [2024-11-11 04:25:52,178] [main] Scan time: 176.283 s (11 ms/file) [testng] [2024-11-11 04:25:52,178] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 125 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-11-11 04:30:16,239] [pool-1-thread-1] Initializing /data/converted/converted/mri-stack.tif: [testng] 04:30:16,240 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 04:30:16,240 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:30:16,241 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-11-11_04-30-16.log] [testng] 04:30:16,241 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6001e428 - End of configuration. [testng] [2024-11-11 04:30:19,716] [pool-1-thread-12] Initializing /data/converted/joseph/BEST_EXAMPLE_LONGER_EXPOSURE.tif: [testng] 04:30:19,717 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 04:30:19,717 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:30:19,717 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-11-11_04-30-19.log] [testng] 04:30:19,718 |-INFO in ch.qos.logback.core.sift.SiftProcessor@481a2aa9 - End of configuration. [testng] [2024-11-11 04:30:21,810] [pool-1-thread-11] Initializing /data/converted/shalin/ibidiuslide1-timelapse3_mid2.tif: [testng] 04:30:21,810 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 04:30:21,810 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:30:21,811 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-11-11_04-30-21.log] [testng] 04:30:21,811 |-INFO in ch.qos.logback.core.sift.SiftProcessor@425e94af - End of configuration. [testng] [2024-11-11 04:30:23,598] [pool-1-thread-10] Initializing /data/converted/kelsey/432x342BW.tif: [testng] 04:30:23,598 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 04:30:23,599 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:30:23,599 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-11-11_04-30-23.log] [testng] 04:30:23,599 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7f9f2fdc - End of configuration. [testng] [2024-11-11 04:30:25,585] [pool-1-thread-9] Initializing /data/converted/eirinn/pharm3-saline2-0147_11.tif: [testng] 04:30:25,585 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 04:30:25,585 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:30:25,586 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-11-11_04-30-25.log] [testng] 04:30:25,586 |-INFO in ch.qos.logback.core.sift.SiftProcessor@f655b4c - End of configuration. [testng] [2024-11-11 04:30:27,965] [pool-1-thread-8] Initializing /data/converted/converted/2chz.tif: [testng] 04:30:27,965 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 04:30:27,965 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:30:27,966 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-11-11_04-30-27.log] [testng] 04:30:27,966 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6792447e - End of configuration. [testng] [2024-11-11 04:30:30,654] [pool-1-thread-7] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_1.tif: [testng] 04:30:30,655 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 04:30:30,655 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:30:30,655 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-11-11_04-30-30.log] [testng] 04:30:30,656 |-INFO in ch.qos.logback.core.sift.SiftProcessor@79ca0e5c - End of configuration. [testng] [2024-11-11 04:30:33,196] [pool-1-thread-6] Initializing /data/converted/dietmar/138.tif: [testng] 04:30:33,196 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 04:30:33,196 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:30:33,197 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-11-11_04-30-33.log] [testng] 04:30:33,198 |-INFO in ch.qos.logback.core.sift.SiftProcessor@512e3564 - End of configuration. [testng] [2024-11-11 04:30:35,730] [pool-1-thread-5] Initializing /data/converted/jan/SampleStack_Mosaic4x5_comb.tif: [testng] 04:30:35,731 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 04:30:35,731 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:30:35,731 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-11-11_04-30-35.log] [testng] 04:30:35,732 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6c66e1a4 - End of configuration. [testng] [2024-11-11 04:30:39,340] [pool-1-thread-4] Initializing /data/converted/markus/Brain_high_dynamic_range_imaging_Z-stack.tif: [testng] 04:30:39,340 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 04:30:39,340 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:30:39,341 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-11-11_04-30-39.log] [testng] 04:30:39,341 |-INFO in ch.qos.logback.core.sift.SiftProcessor@764f50e6 - End of configuration. [testng] [2024-11-11 04:30:40,978] [pool-1-thread-3] Initializing /data/converted/kelsey/650x514BW.tif: [testng] 04:30:40,978 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 04:30:40,978 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:30:40,979 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-11-11_04-30-40.log] [testng] 04:30:40,979 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5000ca90 - End of configuration. [testng] [2024-11-11 04:30:44,192] [pool-1-thread-2] Initializing /data/converted/converted/damian.tif: [testng] 04:30:44,193 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 04:30:44,193 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:30:44,193 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-11-11_04-30-44.log] [testng] 04:30:44,194 |-INFO in ch.qos.logback.core.sift.SiftProcessor@20f30c92 - End of configuration. [testng] [2024-11-11 04:31:16,378] [pool-1-thread-2] Initializing /data/converted/converted/deconvolve6_pseudo_tl000_zs000.tif: [testng] [2024-11-11 04:31:19,674] [pool-1-thread-1] Initializing /data/converted/dietmar/hmads-bac1-bac7-af488-rho-af647_pre-2006-03-30-ten.tif: [testng] [2024-11-11 04:31:21,535] [pool-1-thread-10] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_14.tif: [testng] [2024-11-11 04:31:24,044] [pool-1-thread-3] Initializing /data/scott/Slide133-04.tif: [testng] [2024-11-11 04:31:57,735] [pool-1-thread-2] Initializing /data/converted/karsten/Bild1.tif: [testng] [2024-11-11 04:32:04,622] [pool-1-thread-3] Initializing /data/converted/darren/section0002_w1.tif: [testng] [2024-11-11 04:32:35,958] [pool-1-thread-12] Initializing /data/converted/monica/Monica_elegans_movie.tif: [testng] [2024-11-11 04:32:48,859] [pool-1-thread-3] Initializing /data/converted/markus/Long_TL_CElegans.tif: [testng] [2024-11-11 04:32:55,365] [pool-1-thread-2] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast-widefield.tif: [testng] [2024-11-11 04:35:00,533] [pool-1-thread-8] Initializing /data/converted/dan/zstack_convalaria.tif: [testng] [2024-11-11 04:35:38,120] [pool-1-thread-11] Initializing /data/scott/Slide133-11.tif: [testng] [2024-11-11 04:35:45,172] [pool-1-thread-8] Initializing /data/converted/rolf/example_1-2010_11_25.tif: [testng] [2024-11-11 04:35:47,014] [pool-1-thread-4] Initializing /data/converted/lior/live+cf2b.tif: [testng] [2024-11-11 04:36:15,363] [pool-1-thread-11] Initializing /data/samples/mri-stack/mri-stack.tif: [testng] [2024-11-11 04:36:26,346] [pool-1-thread-8] Initializing /data/converted/eirinn/12_16_2009-01-tara-hd-triple-5to15_position(1)5.tif: [testng] [2024-11-11 04:36:42,256] [pool-1-thread-11] Initializing /data/qa-21570/250618_J1_diff_D3-2-0004.tif: [testng] [2024-11-11 04:36:44,188] [pool-1-thread-4] Initializing /data/converted/joseph/E-2009-0001a.tif: [testng] [2024-11-11 04:36:59,222] [pool-1-thread-1] Initializing /data/converted/markus/PC12_neuroblastoma_Fura2_exp#9.tif: [testng] [2024-11-11 04:37:14,904] [pool-1-thread-11] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_13.tif: [testng] [2024-11-11 04:38:37,451] [pool-1-thread-9] Initializing /data/qa-21570/250618_J1_diff_D3-2-0002.tif: [testng] [2024-11-11 04:39:06,841] [pool-1-thread-9] Initializing /data/converted/converted/wtzer_series76_z003_ch00.tif: [testng] [2024-11-11 04:39:19,332] [pool-1-thread-7] Initializing /data/converted/markus/Material_color_image_HRc_microscanned_4x3K.tif: [testng] [2024-11-11 04:39:37,716] [pool-1-thread-9] Initializing /data/converted/eirinn/11_10_2009-01-lcstim-15-10-09_position(1).tif: [testng] [2024-11-11 04:39:52,955] [pool-1-thread-7] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_24.tif: [testng] [2024-11-11 04:39:57,103] [pool-1-thread-6] Initializing /data/converted/joseph/E-2009-0004.tif: [testng] [2024-11-11 04:41:00,677] [pool-1-thread-10] Initializing /data/converted/markus/Smart_Experiment_4ch-T-time-stitched.tif: [testng] [2024-11-11 04:42:37,814] [pool-1-thread-8] Initializing /data/othmar/mozaic.tif: [testng] [2024-11-11 04:43:56,738] [pool-1-thread-9] Initializing /data/converted/markus/Confidence_ratio_image_PC12_neuroblastoma_Fura2_exp#9-2.tif: [testng] [2024-11-11 04:45:18,797] [pool-1-thread-2] Initializing /data/converted/othmar/z-stack.tif: [testng] [2024-11-11 04:45:50,401] [pool-1-thread-11] Initializing /data/converted/sebastien/F1.tif: [testng] [2024-11-11 04:47:19,081] [pool-1-thread-8] Initializing /data/converted/thomas/test_axiocam_3_1.tif: [testng] [2024-11-11 04:47:47,147] [pool-1-thread-4] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast.tif: [testng] [2024-11-11 04:48:01,445] [pool-1-thread-8] Initializing /data/converted/converted/wtzer_series76_z003_ch00-with-rois.tif: [testng] [2024-11-11 04:48:25,586] [pool-1-thread-8] Initializing /data/converted/jonas/10_0907_multidrug-0001_AB01_03.tif: [testng] [2024-11-11 04:49:06,789] [pool-1-thread-7] Initializing /data/converted/dan/adultnr1.tif: [testng] [2024-11-11 04:49:45,422] [pool-1-thread-11] Initializing /data/scott/Slide133-01.tif: [testng] [2024-11-11 04:50:07,534] [pool-1-thread-6] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_3.tif: [testng] [2024-11-11 04:50:09,346] [pool-1-thread-7] Initializing /data/converted/kelsey/1300x1030BW.tif: [testng] [2024-11-11 04:50:14,942] [pool-1-thread-11] Initializing /data/converted/markus/HighSpeedParas.tif: [testng] [2024-11-11 04:50:36,303] [pool-1-thread-7] Initializing /data/converted/eirinn/12_2_2009-16-hes5-brdu-proper_position(52).tif: [testng] [2024-11-11 04:54:12,220] [pool-1-thread-7] Initializing /data/converted/jeffrey/750-30-03.tif: [testng] [2024-11-11 04:54:44,156] [pool-1-thread-7] Initializing /data/converted/markus/HeLa-Reggie-GFP_ZT_fast-DCV-CI-measured-PSF.tif: [testng] [2024-11-11 04:58:00,891] [pool-1-thread-6] Initializing /data/converted/vladan/vladan.tif: [testng] [2024-11-11 04:58:44,507] [pool-1-thread-5] Initializing /data/converted/karsten/Bild2.tif: [testng] [2024-11-11 04:58:57,658] [pool-1-thread-10] Initializing /data/converted/miso/Aufnahme-184058-0002.tif: [testng] [2024-11-11 04:59:03,486] [pool-1-thread-4] Initializing /data/converted/dietmar/137.tif: [testng] [2024-11-11 04:59:38,902] [pool-1-thread-10] Initializing /data/converted/converted/2chzt.tif: [testng] [2024-11-11 04:59:51,972] [pool-1-thread-5] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_11.tif: [testng] [2024-11-11 05:03:16,145] [pool-1-thread-2] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_2.tif: [testng] [2024-11-11 05:08:32,711] [pool-1-thread-6] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast-sectioned.tif: [testng] [2024-11-11 05:09:14,881] [pool-1-thread-9] Initializing /data/converted/markus/Hypocampus_Tiles_with_stiching.tif: [testng] [2024-11-11 05:10:36,246] [pool-1-thread-8] Initializing /data/converted/markus/6ch-Z-stack_deconvolved.tif: [testng] [2024-11-11 05:12:15,969] [pool-1-thread-4] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_6.tif: [testng] [2024-11-11 05:13:17,069] [pool-1-thread-5] Initializing /data/converted/dietmar/hmads-bac1-bac7-af488-rho-af647_pre-2006-03-30-0016.tif: [testng] [2024-11-11 05:14:07,792] [pool-1-thread-9] Initializing /data/converted/sebastien/test.tif: [testng] [2024-11-11 05:17:07,519] [pool-1-thread-2] Initializing /data/converted/stephan/notok2.tif: [testng] [2024-11-11 05:18:56,707] [pool-1-thread-3] Initializing /data/converted/markus/Branchiostoma_6x12_MosaiX_Tiles_color.tif: [testng] [2024-11-11 05:19:09,468] [pool-1-thread-5] Initializing /data/converted/karsten/247096n3s3s9.tif: [testng] [2024-11-11 05:20:43,459] [pool-1-thread-2] Initializing /data/converted/dietmar/hmads-24h-bac1-7-af647-af488-rho-1day-hyb-csk-2007-06-29-0008_position(113).tif: [testng] [2024-11-11 05:22:57,425] [pool-1-thread-5] Initializing /data/converted/markus/PhaseGFP-MosaiX-Timelapse_Tiles.tif: [testng] [2024-11-11 05:25:53,128] [pool-1-thread-4] Initializing /data/converted/michel/c.tif: [testng] [2024-11-11 05:26:07,359] [pool-1-thread-1] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast-sidebyside.tif: [testng] [2024-11-11 05:27:00,195] [pool-1-thread-4] Initializing /data/converted/rolf/example_2-2010_11_25.tif: [testng] [2024-11-11 05:27:46,669] [pool-1-thread-8] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_9.tif: [testng] [2024-11-11 05:27:54,368] [pool-1-thread-4] Initializing /data/converted/rachel/40K 30s A2.tif: [testng] [2024-11-11 05:28:09,874] [pool-1-thread-6] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_16.tif: [testng] [2024-11-11 05:29:01,186] [pool-1-thread-4] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_17.tif: [testng] [2024-11-11 05:29:25,733] [pool-1-thread-9] Initializing /data/converted/markus/Mouse-newborn-panorama_JPEG_5percent_compressed.tif: [testng] [2024-11-11 05:30:26,793] [pool-1-thread-3] Initializing /data/converted/michel/e.tif: [testng] [2024-11-11 05:30:44,606] [pool-1-thread-9] Initializing /data/converted/nicolas/image.tif: [testng] [2024-11-11 05:31:29,997] [pool-1-thread-9] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_5.tif: [testng] [2024-11-11 05:32:11,460] [pool-1-thread-3] Initializing /data/converted/cecilia/day 1 naked nb positive 1-2007-0055.tif: [testng] [2024-11-11 05:33:20,451] [pool-1-thread-3] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_23.tif: [testng] [2024-11-11 05:33:52,584] [pool-1-thread-2] Initializing /data/converted/markus/30channels_exposure-series.tif: [testng] [2024-11-11 05:37:59,884] [pool-1-thread-2] Initializing /data/converted/david/snap-181518-0001.tif: [testng] [2024-11-11 05:38:49,681] [pool-1-thread-2] Initializing /data/converted/strand/2Colors1Plane.tif: [testng] [2024-11-11 05:40:27,939] [pool-1-thread-7] Initializing /data/converted/darren/section0001_w1.tif: [testng] [2024-11-11 05:40:31,383] [pool-1-thread-5] Initializing /data/converted/eirinn/demo-tile.tif: [testng] [2024-11-11 05:40:34,545] [pool-1-thread-2] Initializing /data/converted/eirinn/5_6_2009-dj9-03_a01_01.tif: [testng] [2024-11-11 05:41:10,431] [pool-1-thread-8] Initializing /data/converted/michel/a.tif: [testng] [2024-11-11 05:41:20,495] [pool-1-thread-7] Initializing /data/converted/rachel/40K 30s A1.tif: [testng] [2024-11-11 05:41:54,687] [pool-1-thread-5] Initializing /data/converted/joseph/E-2009_0022.tif: [testng] [2024-11-11 05:42:07,822] [pool-1-thread-8] Initializing /data/converted/converted/damian-compressed.tif: [testng] [2024-11-11 05:42:15,685] [pool-1-thread-2] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_19.tif: [testng] [2024-11-11 05:42:34,018] [pool-1-thread-7] Initializing /data/converted/ville/MultiCh-RGB/pollen_rgb.tif: [testng] [2024-11-11 05:42:41,727] [pool-1-thread-6] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_4.tif: [testng] [2024-11-11 05:42:58,409] [pool-1-thread-8] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_22.tif: [testng] [2024-11-11 05:43:19,014] [pool-1-thread-4] Initializing /data/converted/joseph/Alike_best_example_but_WORKS_FINE_maybe_cause_shorter_expose.tif: [testng] [2024-11-11 05:43:38,622] [pool-1-thread-7] Initializing /data/converted/susan/BY4741NQ2.tif: [testng] [2024-11-11 05:44:31,231] [pool-1-thread-9] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_18.tif: [testng] [2024-11-11 05:44:39,143] [pool-1-thread-7] Initializing /data/converted/dietmar/dapi-texasred-0015.tif: [testng] [2024-11-11 05:45:23,940] [pool-1-thread-1] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_25.tif: [testng] [2024-11-11 05:46:56,547] [pool-1-thread-4] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_10.tif: [testng] [2024-11-11 05:48:18,922] [pool-1-thread-3] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_15.tif: [testng] [2024-11-11 05:55:00,566] [pool-1-thread-7] Initializing /data/converted/michel/b.tif: [testng] [2024-11-11 05:55:18,614] [pool-1-thread-6] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_8.tif: [testng] [2024-11-11 05:56:02,990] [pool-1-thread-7] Initializing /data/converted/markus/Mouse-newborn-panorama_lossless_compressed.tif: [testng] 05:56:23,923 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 05:56:23,923 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 05:56:23,924 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-11-11_05-56-23.log] [testng] 05:56:23,924 |-INFO in ch.qos.logback.core.sift.SiftProcessor@453e5833 - End of configuration. [testng] [2024-11-11 05:56:44,829] [pool-1-thread-8] Initializing /data/converted/michel/d.tif: [testng] [2024-11-11 05:57:00,740] [pool-1-thread-2] Initializing /data/dorai/F_ZImage10_(X10)_C.tif: [testng] [2024-11-11 05:57:12,652] [pool-1-thread-7] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_12.tif: [testng] [2024-11-11 05:57:39,776] [pool-1-thread-8] Initializing /data/converted/markus/Mouse-newborn-panorama.tif: [testng] [2024-11-11 05:57:50,108] [pool-1-thread-2] Initializing /data/qa-21570/20150421_HepG2_yH2AX_DAPI_0.5h_5GyDOWN_1512_cell04_SIR_ALX.dv_comp.tif: [testng] [2024-11-11 05:58:07,253] [pool-1-thread-2] Initializing /data/converted/jonas/10_0907_multidrug-0001_AB01_08.tif: [testng] [2024-11-11 05:58:32,914] [pool-1-thread-9] Initializing /data/converted/james/Sylvain_run3_1Gy_Live7-2008-0019.tif: [testng] [2024-11-11 05:58:48,175] [pool-1-thread-10] Initializing /data/converted/markus/MosaiX_irregular_Z-stack_with_autofocus.tif: [testng] [2024-11-11 05:58:54,457] [pool-1-thread-8] Initializing /data/converted/dietmar/hmads-bac1-bac7-af488-rho-af647_pre-2006-03-30-six.tif: [testng] [2024-11-11 05:58:57,536] [pool-1-thread-4] Initializing /data/converted/stephan/notok1.tif: [testng] [2024-11-11 05:59:32,640] [pool-1-thread-1] Initializing /data/qa-21570/250618_J1_diff_D3-2-0003.tif: [testng] [2024-11-11 05:59:44,342] [pool-1-thread-5] Initializing /data/scott/Slide133-08.tif: [testng] [2024-11-11 06:00:14,892] [pool-1-thread-1] Initializing /data/converted/othmar/mozaic.tif: [testng] [2024-11-11 06:00:29,363] [pool-1-thread-5] Initializing /data/converted/ville/MultiCh-RGB/pollen_bw.tif: [testng] [2024-11-11 06:01:11,387] [pool-1-thread-3] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_21.tif: [testng] [2024-11-11 06:01:27,301] [pool-1-thread-5] Initializing /data/converted/lior/live+cf5b.tif: [testng] 06:53:20,513 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 06:53:20,513 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 06:53:20,516 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-11-11_06-53-20.log] [testng] 06:53:20,516 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3cff099b - End of configuration. [testng] 06:56:52,212 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 06:56:52,213 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 06:56:52,214 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-11-11_06-56-52.log] [testng] 06:56:52,214 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2b85fc - End of configuration. [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 6625, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 154 minutes 0 seconds Finished: SUCCESS