Started by upstream project "BIOFORMATS-test-repo" build number 254
originally caused by:
 Started by upstream project "Trigger" build number 278
 originally caused by:
  Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@9
[BIOFORMATS-test-folder@9] $ /bin/bash -xe /tmp/jenkins11898156135074312512.sh
+ '[' sxm = slidebook ']'
++ date +%u
+ '[' 3 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_40061_merge_ci -v /uod/idr/repos/curated/sxm:/data -v /uod/idr-scratch/merge-ci/curated/sxm:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
     [echo] isSnapshot = true

init-title:
     [echo] ----------=========== bio-formats-testing-framework ===========----------

init-timestamp:

init:

copy-resources:

compile:
[resolver:resolve] Resolving artifacts

compile-tests:
[resolver:resolve] Resolving artifacts
    [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
    [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
    [javac] 1 warning

test-automated:
   [testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket
   [testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket
   [testng] File leak detector installed
   [testng] 01:46:26,297 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
   [testng] 01:46:26,298 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - No custom configurators were discovered as a service.
   [testng] 01:46:26,298 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 01:46:26,299 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 01:46:26,300 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
   [testng] 01:46:26,300 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
   [testng] 01:46:26,300 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
   [testng] 01:46:26,300 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 01:46:26,301 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 01:46:26,301 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
   [testng] 01:46:26,302 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
   [testng] 01:46:26,302 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
   [testng] 01:46:26,462 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
   [testng] 01:46:26,462 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
   [testng] 01:46:26,484 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
   [testng] 01:46:26,484 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
   [testng] 01:46:26,490 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
   [testng] 01:46:26,490 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
   [testng] 01:46:26,490 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
   [testng] 01:46:26,490 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
   [testng] 01:46:26,490 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@2e3967ea - End of configuration.
   [testng] 01:46:26,491 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@2e6a8155 - Registering current configuration as safe fallback point
   [testng] 01:46:26,491 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 190 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
   [testng] [2024-11-13 01:46:26,500] [main] java.version = 17.0.2
   [testng] 01:46:26,503 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
   [testng] 01:46:26,504 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:46:26,542 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-11-13_01-46-26.log]
   [testng] 01:46:26,544 |-INFO in ch.qos.logback.core.sift.SiftProcessor@798162bc - End of configuration.
   [testng] [2024-11-13 01:46:26,546] [main] testng.directory = /data
   [testng] [2024-11-13 01:46:26,546] [main] testng.configDirectory = /config
   [testng] [2024-11-13 01:46:26,577] [main] testng.multiplier = 1.0
   [testng] [2024-11-13 01:46:26,578] [main] testng.in-memory = false
   [testng] [2024-11-13 01:46:26,578] [main] testng.allow-missing = false
   [testng] [2024-11-13 01:46:26,578] [main] user.language = en
   [testng] [2024-11-13 01:46:26,578] [main] user.country = ${user.country}
   [testng] [2024-11-13 01:46:26,578] [main] Maximum heap size = 15360 MB
   [testng] Scanning for files...
   [testng] [2024-11-13 01:49:08,836] [main] ----------------------------------------
   [testng] [2024-11-13 01:49:08,837] [main] Total files: 268
   [testng] [2024-11-13 01:49:08,837] [main] Scan time: 162.258 s (605 ms/file)
   [testng] [2024-11-13 01:49:08,837] [main] ----------------------------------------
   [testng] Building list of tests...
   [testng] Ready to test 160 files
   [testng] [TestNG] Running:
   [testng]   Bio-Formats software test suite
   [testng] 
   [testng] [2024-11-13 01:52:28,984] [pool-1-thread-1] Initializing /data/steve/JEOL/WinSem (Sue)/SIC2.IMG: 
   [testng] 01:52:28,984 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
   [testng] 01:52:28,984 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:52:28,986 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-11-13_01-52-28.log]
   [testng] 01:52:28,986 |-INFO in ch.qos.logback.core.sift.SiftProcessor@370996a7 - End of configuration.
   [testng] [2024-11-13 01:52:29,280] [pool-1-thread-12] Initializing /data/steve/Philips (Markus G)/302.IMG: 
   [testng] 01:52:29,280 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
   [testng] 01:52:29,280 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:52:29,281 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-11-13_01-52-29.log]
   [testng] 01:52:29,281 |-INFO in ch.qos.logback.core.sift.SiftProcessor@51e8ecea - End of configuration.
   [testng] [2024-11-13 01:52:29,461] [pool-1-thread-11] Initializing /data/steve/Molecular Imaging/Mol Imag v4.18 (Reinat)/TwoDots.STP: 
   [testng] 01:52:29,461 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
   [testng] 01:52:29,461 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:52:29,462 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-11-13_01-52-29.log]
   [testng] 01:52:29,462 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1ce81cb5 - End of configuration.
   [testng] [2024-11-13 01:52:29,681] [pool-1-thread-10] Initializing /data/steve/TopoMetrix/Topo STM (Liam McD)/GRID1.TFR: 
   [testng] 01:52:29,681 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
   [testng] 01:52:29,681 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:52:29,682 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-11-13_01-52-29.log]
   [testng] 01:52:29,682 |-INFO in ch.qos.logback.core.sift.SiftProcessor@68fcde7f - End of configuration.
   [testng] [2024-11-13 01:52:29,861] [pool-1-thread-9] Initializing /data/steve/Quesant Instr/Quesant v1.2 (Marc F)/stm1.afm: 
   [testng] 01:52:29,861 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
   [testng] 01:52:29,861 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:52:29,862 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-11-13_01-52-29.log]
   [testng] 01:52:29,862 |-INFO in ch.qos.logback.core.sift.SiftProcessor@e7ec891 - End of configuration.
   [testng] [2024-11-13 01:52:30,072] [pool-1-thread-8] Initializing /data/steve/TopoMetrix/Topo MFM (SC)/NDR2-1.2FL: 
   [testng] 01:52:30,072 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
   [testng] 01:52:30,072 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:52:30,073 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-11-13_01-52-30.log]
   [testng] 01:52:30,073 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6f7b66ba - End of configuration.
   [testng] [2024-11-13 01:52:30,243] [pool-1-thread-7] Initializing /data/steve/TIFF/HAFF SEM: 
   [testng] 01:52:30,243 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
   [testng] 01:52:30,243 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:52:30,244 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-11-13_01-52-30.log]
   [testng] 01:52:30,244 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3a6a98e - End of configuration.
   [testng] [2024-11-13 01:52:30,933] [pool-1-thread-6] Initializing /data/steve/Philips (Markus G)/135-32.IMG: 
   [testng] 01:52:30,933 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
   [testng] 01:52:30,933 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:52:30,934 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-11-13_01-52-30.log]
   [testng] 01:52:30,934 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2d6f31f6 - End of configuration.
   [testng] [2024-11-13 01:52:31,104] [pool-1-thread-5] Initializing /data/steve/Quesant Instr/Quesant v1.2 (Marc F)/stm2.afm: 
   [testng] 01:52:31,104 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
   [testng] 01:52:31,104 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:52:31,105 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-11-13_01-52-31.log]
   [testng] 01:52:31,105 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5f53afc4 - End of configuration.
   [testng] [2024-11-13 01:52:31,311] [pool-1-thread-4] Initializing /data/steve/FITS/M51.fits: 
   [testng] 01:52:31,312 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
   [testng] 01:52:31,312 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:52:31,312 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-11-13_01-52-31.log]
   [testng] 01:52:31,313 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5cd5c641 - End of configuration.
   [testng] [2024-11-13 01:52:31,373] [pool-1-thread-3] Initializing /data/steve/JEOL/SPM (Hiroyuki Isobe)/JEOL3.tif: 
   [testng] 01:52:31,373 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
   [testng] 01:52:31,373 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:52:31,373 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-11-13_01-52-31.log]
   [testng] 01:52:31,374 |-INFO in ch.qos.logback.core.sift.SiftProcessor@787116e - End of configuration.
   [testng] [2024-11-13 01:52:32,005] [pool-1-thread-2] Initializing /data/steve/TIFF/Macrophage cell images/T24-24 1600 36_48-bit.tif: 
   [testng] 01:52:32,005 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
   [testng] 01:52:32,005 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:52:32,006 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-11-13_01-52-32.log]
   [testng] 01:52:32,006 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7d3d2da - End of configuration.
   [testng] [2024-11-13 01:52:34,648] [pool-1-thread-4] Initializing /data/steve/Zeiss LSM/Zeiss LSM (John S)/Zeiss LSM 2 samples:pixel/coltubfitc1proj.lsm: 
   [testng] [2024-11-13 01:52:35,642] [pool-1-thread-8] Initializing /data/steve/RHK Tech/RHK (Mark Flowers)/Demo07.sm2: 
   [testng] [2024-11-13 01:52:35,875] [pool-1-thread-5] Initializing /data/steve/Targa/Test.TGA: 
   [testng] [2024-11-13 01:52:36,078] [pool-1-thread-9] Initializing /data/steve/JEOL/SPM (Hiroyuki Isobe)/HOPG.tif: 
   [testng] [2024-11-13 01:52:36,816] [pool-1-thread-11] Initializing /data/steve/VG SAM (Karen)/PEAK.DTI: 
   [testng] [2024-11-13 01:52:37,034] [pool-1-thread-10] Initializing /data/steve/Zeiss LSM/Zeiss LSM (Ewald B)/NIALDIAN.TIF: 
   [testng] [2024-11-13 01:52:37,744] [pool-1-thread-6] Initializing /data/steve/Burleigh/Burleigh v2/Graphite: 
   [testng] [2024-11-13 01:52:38,728] [pool-1-thread-12] Initializing /data/steve/Gatan/Gatan Mac (Guy Mayor)/Digital Micrograph 3.4: 
   [testng] [2024-11-13 01:52:40,376] [pool-1-thread-11] Initializing /data/steve/JEOL/WinSem (Sue)/Shuttle tile ceramic/SHUTTLEE.IMG: 
   [testng] [2024-11-13 01:52:40,869] [pool-1-thread-8] Initializing /data/steve/Seiko Instr (Hwansoo)/05808001-2.xqd: 
   [testng] [2024-11-13 01:52:41,217] [pool-1-thread-5] Initializing /data/steve/Gatan/Gatan Mac (Guy Mayor)/Digital Micrograph 2.5: 
   [testng] [2024-11-13 01:52:41,414] [pool-1-thread-1] Initializing /data/steve/TIFF/CONCRETE TIFF: 
   [testng] [2024-11-13 01:52:42,191] [pool-1-thread-4] Initializing /data/steve/Leica TCS (Keith B)/25_5BJ.SXM: 
   [testng] [2024-11-13 01:52:42,748] [pool-1-thread-7] Initializing /data/steve/TopoMetrix/Topo MFM (SC)/NDPOL-01.TFR: 
   [testng] [2024-11-13 01:52:43,003] [pool-1-thread-3] Initializing /data/steve/Zeiss LSM/Zeiss LSM (John S)/Zeiss LSM 1 sample:pixel/ug6stack3.lsm: 
   [testng] [2024-11-13 01:52:43,405] [pool-1-thread-2] Initializing /data/steve/RHK Tech/RHK (Bob Baker)/Examp_05.SM2: 
   [testng] [2024-11-13 01:52:43,739] [pool-1-thread-12] Initializing /data/steve/Philips (Markus G)/135-31.IMG: 
   [testng] [2024-11-13 01:52:45,349] [pool-1-thread-5] Initializing /data/steve/JPK Instr (Christian L)/Anti-reflex-coating.jpk: 
   [testng] [2024-11-13 01:52:45,744] [pool-1-thread-8] Initializing /data/steve/TopoMetrix/Topo SFM (SC)/FFT test: 
   [testng] [2024-11-13 01:52:46,385] [pool-1-thread-6] Initializing /data/steve/Gatan/TEM (Larry Thomas)/TEM 10 KX: 
   [testng] [2024-11-13 01:52:46,523] [pool-1-thread-7] Initializing /data/steve/Misc SXM test images/BMP images/m20_p.bmp: 
   [testng] [2024-11-13 01:52:46,904] [pool-1-thread-11] Initializing /data/steve/SM-Camera/Orhan + IPES rig: 
   [testng] [2024-11-13 01:52:47,697] [pool-1-thread-10] Initializing /data/steve/Zeiss LSM/Zeiss LSM (John S)/Zeiss LSM 2 samples:pixel/coltubfitc1.lsm: 
   [testng] [2024-11-13 01:52:48,144] [pool-1-thread-9] Initializing /data/steve/Gatan/Gatan (Sue D)/SEM 500X (Larry): 
   [testng] [2024-11-13 01:52:48,535] [pool-1-thread-2] Initializing /data/steve/JEOL/WinSem (Sue)/CONCRETE.IMG: 
   [testng] [2024-11-13 01:52:49,027] [pool-1-thread-12] Initializing /data/steve/JEOL/WinSem (Sue)/Shuttle tile ceramic/SHUTTLED.IMG: 
   [testng] [2024-11-13 01:52:49,496] [pool-1-thread-3] Initializing /data/steve/VG SAM (Karen)/BGND.DTI: 
   [testng] [2024-11-13 01:52:50,083] [pool-1-thread-7] Initializing /data/steve/Zeiss LSM/Zeiss LSM (Ewald B)/FGD006.TIF: 
   [testng] [2024-11-13 01:52:51,569] [pool-1-thread-6] Initializing /data/steve/Quesant Instr/Quesant v1.2 (Marc F)/afm3.afm: 
   [testng] [2024-11-13 01:52:51,941] [pool-1-thread-1] Initializing /data/steve/RHK Tech/RHK IV (Koji N)/02042603.sm2: 
   [testng] [2024-11-13 01:52:52,613] [pool-1-thread-9] Initializing /data/steve/JEOL/WinSem (Sue)/BALLS.IMG: 
   [testng] [2024-11-13 01:52:53,155] [pool-1-thread-5] Initializing /data/steve/Quesant Instr/Quesant v1.2 (Marc F)/afm1.afm: 
   [testng] [2024-11-13 01:52:53,436] [pool-1-thread-4] Initializing /data/steve/Quesant Instr/Quesant v2.0 (Brad Taft)/03031020.afm: 
   [testng] [2024-11-13 01:52:53,739] [pool-1-thread-3] Initializing /data/steve/SBIG/M82 H 100s Tr=10s: 
   [testng] [2024-11-13 01:52:54,906] [pool-1-thread-8] Initializing /data/steve/Burleigh/Burleigh v2/Burleigh v2 (Phil W)/0_h4_4.img: 
   [testng] [2024-11-13 01:52:55,848] [pool-1-thread-10] Initializing /data/steve/RHK Tech/RHK (Oliver Leifeld)/SM02_08.SM2: 
   [testng] [2024-11-13 01:52:56,261] [pool-1-thread-11] Initializing /data/steve/Gatan/Gatan (Sue D)/WOODLOUSE: 
   [testng] [2024-11-13 01:52:56,552] [pool-1-thread-2] Initializing /data/steve/Seiko Instr (Hwansoo)/05808002.xqf: 
   [testng] [2024-11-13 01:52:58,101] [pool-1-thread-6] Initializing /data/steve/TIFF/Hough test TIFF: 
   [testng] [2024-11-13 01:52:59,325] [pool-1-thread-1] Initializing /data/steve/Burleigh/Burleigh v1/Burleigh.IMG: 
   [testng] [2024-11-13 01:53:00,460] [pool-1-thread-12] Initializing /data/steve/Misc SXM test images/Fake STM/Fake STM (8 rpts) TIFF: 
   [testng] [2024-11-13 01:53:01,826] [pool-1-thread-4] Initializing /data/steve/Gatan/Gatan (Patrick Burton)/PDB_DARK_25k.dm3: 
   [testng] [2024-11-13 01:53:02,037] [pool-1-thread-5] Initializing /data/steve/Zeiss LSM/Zeiss LSM (John S)/Zeiss LSM 1 sample:pixel/ug6proj3.lsm: 
   [testng] [2024-11-13 01:53:02,733] [pool-1-thread-7] Initializing /data/steve/RHK Tech/RHK (Bob Baker)/SCREEN1.PICT: 
   [testng] [2024-11-13 01:53:04,023] [pool-1-thread-11] Initializing /data/steve/FITS/M104.fits: 
   [testng] [2024-11-13 01:53:04,763] [pool-1-thread-10] Initializing /data/steve/FITS/Meade DSI/M31bB1.fts: 
   [testng] [2024-11-13 01:53:05,546] [pool-1-thread-9] Initializing /data/steve/JEOL/SPM (Hiroyuki Isobe)/990304j.tif: 
   [testng] [2024-11-13 01:53:07,135] [pool-1-thread-2] Initializing /data/steve/Misc SXM test images/Stacks/DoF test stack (Ahnelt): 
   [testng] [2024-11-13 01:53:09,212] [pool-1-thread-4] Initializing /data/steve/Misc SXM test images/Stacks/Fred's stack: 
   [testng] [2024-11-13 01:53:10,965] [pool-1-thread-11] Initializing /data/steve/Gatan/Gatan TIFF/THE FLY 4 TIFF: 
   [testng] [2024-11-13 01:53:12,763] [pool-1-thread-10] Initializing /data/steve/Bio-Rad (Nico Lindegger)/b.PIC: 
   [testng] [2024-11-13 01:53:13,997] [pool-1-thread-7] Initializing /data/steve/Oxford Instr (Yoshimasa)/98042103.TIF: 
   [testng] [2024-11-13 01:53:18,259] [pool-1-thread-5] Initializing /data/steve/TIFF/Macrophage cell images/T08-08 1600 24-bit.tif: 
   [testng] [2024-11-13 01:53:21,476] [pool-1-thread-8] Initializing /data/steve/TIFF/ta123 stack TIFF: 
   [testng] [2024-11-13 01:53:25,220] [pool-1-thread-3] Initializing /data/steve/JEOL/SEM (Steve Foulds)/IPS2000.DAT: 
   [testng] [2024-11-13 01:53:26,597] [pool-1-thread-12] Initializing /data/steve/RHK Tech/RHK (Bob Baker)/Examp_03.SM2: 
   [testng] [2024-11-13 01:53:27,116] [pool-1-thread-1] Initializing /data/steve/Oxford Instr (Yoshimasa)/80619a.top: 
   [testng] [2024-11-13 01:53:27,477] [pool-1-thread-6] Initializing /data/steve/Gatan/Gatan PC (Eric Leroy)/Oxygen map 1.dm3: 
   [testng] [2024-11-13 01:53:29,238] [pool-1-thread-10] Initializing /data/steve/Philips (Markus G)/135-33.IMG: 
   [testng] [2024-11-13 01:53:30,007] [pool-1-thread-6] Initializing /data/steve/Misc SXM test images/Chromosome images/HKGmaizeMitose5.pict: 
   [testng] [2024-11-13 01:53:30,474] [pool-1-thread-9] Initializing /data/steve/TIFF/ta269 TIFF: 
   [testng] [2024-11-13 01:53:31,674] [pool-1-thread-2] Initializing /data/steve/Molecular Imaging/Mol Imag v4.18 (Reinat)/npc-liq-sharO_003.STP: 
   [testng] [2024-11-13 01:53:32,005] [pool-1-thread-4] Initializing /data/steve/Gatan/Gatan PC (Eric Leroy)/Iron map 10.dm3: 
   [testng] [2024-11-13 01:53:32,193] [pool-1-thread-3] Initializing /data/steve/TIFF/Macrophage cell images/D1-A-1 1392 36-bit.tif: 
   [testng] [2024-11-13 01:53:32,689] [pool-1-thread-1] Initializing /data/steve/Gatan/Gatan (Patrick Burton)/PDB_DARK_25k.dm2: 
   [testng] [2024-11-13 01:53:32,865] [pool-1-thread-12] Initializing /data/steve/TopoMetrix/Topo STM v5 (Ewald B)/c80-50.ffr: 
   [testng] [2024-11-13 01:53:33,194] [pool-1-thread-11] Initializing /data/steve/JEOL/SPM (Masashi N)/FFM204.TIF: 
   [testng] [2024-11-13 01:53:34,277] [pool-1-thread-7] Initializing /data/steve/Hamamatsu (Keith B)/HIS-12bit-1a.HIS: 
   [testng] [2024-11-13 01:53:36,443] [pool-1-thread-6] Initializing /data/steve/TopoMetrix/Topo STM v5 (Ewald B)/c80-50ffr.tif: 
   [testng] [2024-11-13 01:53:37,748] [pool-1-thread-4] Initializing /data/steve/Seiko Instr (Hwansoo)/05808001-3.xqd: 
   [testng] [2024-11-13 01:53:38,197] [pool-1-thread-10] Initializing /data/steve/Philips (Markus G)/302.TIF: 
   [testng] [2024-11-13 01:53:39,236] [pool-1-thread-1] Initializing /data/steve/Bio-Rad (Nico Lindegger)/a.PIC: 
   [testng] [2024-11-13 01:53:39,982] [pool-1-thread-8] Initializing /data/steve/Misc SXM test images/Hough transform/Dale's bubbles: 
   [testng] [2024-11-13 01:53:41,126] [pool-1-thread-5] Initializing /data/steve/Misc SXM test images/Chromosome images/Chironomus2.pict: 
   [testng] [2024-11-13 01:53:41,468] [pool-1-thread-2] Initializing /data/steve/JPK Instr (Christian L)/Titanium-implant.jpk: 
   [testng] [2024-11-13 01:53:42,051] [pool-1-thread-12] Initializing /data/steve/Misc SXM test images/Hough transform/Nathalie's test: 
   [testng] [2024-11-13 01:53:43,034] [pool-1-thread-7] Initializing /data/steve/UBM (Rosset)/SG2.PR3: 
   [testng] [2024-11-13 01:53:43,784] [pool-1-thread-9] Initializing /data/steve/Burleigh/Burleigh v2/Burleigh v2 (Phil W)/1_2h2_3.img: 
   [testng] [2024-11-13 01:53:45,927] [pool-1-thread-4] Initializing /data/steve/Unisoku (Takashi)/Sample.HDR: 
   [testng] [2024-11-13 01:53:47,352] [pool-1-thread-1] Initializing /data/steve/Gatan/Gatan (Sue D)/Honey Bee: 
   [testng] [2024-11-13 01:53:47,567] [pool-1-thread-5] Initializing /data/steve/Gatan/Gatan (Sue D)/THE FLY A: 
   [testng] [2024-11-13 01:53:47,764] [pool-1-thread-11] Initializing /data/steve/TopoMetrix/Topo SFM (SC)/PA2.TFR: 
   [testng] [2024-11-13 01:53:48,211] [pool-1-thread-3] Initializing /data/steve/Quesant Instr/Quesant v2.0 (Brad Taft)/03031004.afm: 
   [testng] [2024-11-13 01:53:48,580] [pool-1-thread-7] Initializing /data/steve/JEOL/SPM (Masashi N)/AFM204.TIF: 
   [testng] [2024-11-13 01:53:50,611] [pool-1-thread-10] Initializing /data/steve/TopoMetrix/Topo SFM (SC)/IM_P1.TFR: 
   [testng] [2024-11-13 01:53:51,022] [pool-1-thread-6] Initializing /data/steve/Gatan/Gatan (Sue D)/THE FLY: 
   [testng] [2024-11-13 01:53:51,775] [pool-1-thread-2] Initializing /data/steve/Hamamatsu (Keith B)/HIS-12bit-3.HIS: 
   [testng] [2024-11-13 01:53:52,948] [pool-1-thread-5] Initializing /data/steve/Gatan/Gatan TIFF/Si CHIP TIFF: 
   [testng] [2024-11-13 01:53:54,246] [pool-1-thread-1] Initializing /data/steve/Zeiss LSM/Zeiss LSM - 2 samp:pix (??)/16bcutagain.lsm: 
   [testng] [2024-11-13 01:53:54,875] [pool-1-thread-11] Initializing /data/steve/RHK Tech/RHK (Bob Baker)/Examp_02.SM2: 
   [testng] [2024-11-13 01:53:55,188] [pool-1-thread-3] Initializing /data/steve/Gatan/Gatan TIFF/BALL TIFF: 
   [testng] [2024-11-13 01:53:56,189] [pool-1-thread-8] Initializing /data/steve/FITS/Meade DSI/M31bG1.fts: 
   [testng] [2024-11-13 01:53:56,795] [pool-1-thread-6] Initializing /data/steve/Oxford Instr (Yoshimasa)/98042103.top: 
   [testng] [2024-11-13 01:53:57,187] [pool-1-thread-12] Initializing /data/steve/Quesant Instr/Quesant v2.0 (Hal E)/2-18-05A.afm: 
   [testng] [2024-11-13 01:53:57,625] [pool-1-thread-10] Initializing /data/steve/Quesant Instr/Quesant v2.0 (Hal E)/03-17-05A.afm: 
   [testng] [2024-11-13 01:53:58,079] [pool-1-thread-9] Initializing /data/steve/RHK Tech/RHK (Bob Baker)/Examp_01.SM2: 
   [testng] [2024-11-13 01:53:59,069] [pool-1-thread-8] Initializing /data/steve/RHK Tech/RHK (Mark Flowers)/Silicon.sm2: 
   [testng] [2024-11-13 01:53:59,533] [pool-1-thread-2] Initializing /data/steve/FITS/Meade DSI/M31bR1.fts: 
   [testng] [2024-11-13 01:53:59,707] [pool-1-thread-4] Initializing /data/steve/JEOL/WinSem (Sue)/Shuttle tile ceramic/SHUTTLEA.IMG: 
   [testng] [2024-11-13 01:54:00,922] [pool-1-thread-11] Initializing /data/steve/Hamamatsu (Keith B)/HIS-16bit-nopack.HIS: 
   [testng] [2024-11-13 01:54:01,404] [pool-1-thread-7] Initializing /data/steve/TopoMetrix/Topo SFM (SC)/PA7.TFR: 
   [testng] [2024-11-13 01:54:01,878] [pool-1-thread-6] Initializing /data/steve/Molecular Imaging/Mol Imag v5.0 (Lionel S)/Cu#18-NaOH-035.STP: 
   [testng] [2024-11-13 01:54:02,344] [pool-1-thread-1] Initializing /data/steve/TIFF/Macrophage cell images/T48-44 800 24-bit.tif: 
   [testng] [2024-11-13 01:54:03,351] [pool-1-thread-12] Initializing /data/steve/TopoMetrix/Topo STM v5 (Ewald B)/c80-50zfr.tif: 
   [testng] [2024-11-13 01:54:04,321] [pool-1-thread-10] Initializing /data/steve/FITS/M13.fits: 
   [testng] [2024-11-13 01:54:05,054] [pool-1-thread-2] Initializing /data/steve/TIFF/Macrophage cell images/RT1-f-24 1600 24-bit.tif: 
   [testng] [2024-11-13 01:54:06,678] [pool-1-thread-9] Initializing /data/steve/SBIG/M81 H 250s Tr=5s: 
   [testng] [2024-11-13 01:54:08,079] [pool-1-thread-8] Initializing /data/steve/Misc SXM test images/Chromosome images/HRhuman1.pict: 
   [testng] [2024-11-13 01:54:08,664] [pool-1-thread-11] Initializing /data/steve/RHK Tech/RHK (Bob Baker)/Examp_04.SM2: 
   [testng] [2024-11-13 01:54:09,084] [pool-1-thread-10] Initializing /data/steve/Hamamatsu (Keith B)/HIS-16bit-packed.HIS: 
   [testng] [2024-11-13 01:54:09,721] [pool-1-thread-7] Initializing /data/steve/JEOL/WinSem (Sue)/TA.IMG: 
   [testng] [2024-11-13 01:54:10,299] [pool-1-thread-5] Initializing /data/steve/Quesant Instr/Quesant v1.2 (Marc F)/afm2.afm: 
   [testng] [2024-11-13 01:54:10,731] [pool-1-thread-3] Initializing /data/steve/Burleigh/Burleigh v2/Burleigh v2 (Phil W)/0_h4_3.img: 
   [testng] [2024-11-13 01:54:11,964] [pool-1-thread-4] Initializing /data/steve/Gatan/Gatan (Sue D)/THE FLY 3: 
   [testng] [2024-11-13 01:54:12,232] [pool-1-thread-6] Initializing /data/steve/JEOL/WinSem (Sue)/RICK1.IMG: 
   [testng] [2024-11-13 01:54:13,855] [pool-1-thread-8] Initializing /data/steve/RHK Tech/RHK STS (Peter Sloan)/SloanSpec.SM2: 
   [testng] [2024-11-13 01:54:14,825] [pool-1-thread-10] Initializing /data/steve/SBIG/M81 M 40s: 
   [testng] [2024-11-13 01:54:15,993] [pool-1-thread-11] Initializing /data/steve/Hamamatsu (Keith B)/HIS-8bit.HIS: 
   [testng] [2024-11-13 01:54:16,974] [pool-1-thread-5] Initializing /data/steve/JEOL/WinSem (Sue)/Shuttle tile ceramic/SHUTTLEC.IMG: 
   [testng] [2024-11-13 01:54:17,594] [pool-1-thread-12] Initializing /data/steve/RHK Tech/RHK-XPM Pro (Lydie L)/B70417000Q.SM3: 
   [testng] [2024-11-13 01:54:17,970] [pool-1-thread-1] Initializing /data/steve/Gatan/Gatan PC (Eric Leroy)/BF super alliage.dm3: 
   [testng] [2024-11-13 01:54:18,140] [pool-1-thread-4] Initializing /data/steve/Hamamatsu (Keith B)/HIS-12bit-2b.HIS: 
   [testng] [2024-11-13 01:54:18,523] [pool-1-thread-7] Initializing /data/steve/TIFF/Little owl TIFF: 
   [testng] [2024-11-13 01:54:19,939] [pool-1-thread-2] Initializing /data/steve/Misc SXM test images/Fake STM/Fake STM (4 rpts) TIFF: 
   [testng] [2024-11-13 01:54:21,218] [pool-1-thread-9] Initializing /data/steve/SM-Camera/W(110)+Fe,5nA,30min@110eV: 
   [testng] [2024-11-13 01:54:22,241] [pool-1-thread-3] Initializing /data/steve/TIFF/CD-ROM TIFF: 
   [testng] [2024-11-13 01:54:24,381] [pool-1-thread-8] Initializing /data/steve/Molecular Imaging/Mol Imag v4.19 (Michael Z)/Wafer_vesicles_2min_010.STP: 
   [testng] [2024-11-13 01:54:24,863] [pool-1-thread-6] Initializing /data/steve/JEOL/SPM (Hiroyuki Isobe)/990301c.tif: 
   [testng] [2024-11-13 01:54:26,272] [pool-1-thread-11] Initializing /data/steve/TIFF/8MAR03A.TIFF: 
   [testng] [2024-11-13 01:54:27,412] [pool-1-thread-1] Initializing /data/steve/Gatan/Gatan (Sue D)/THE FLY 2: 
   [testng] [2024-11-13 01:54:27,616] [pool-1-thread-4] Initializing /data/steve/RHK Tech/RHK-XPM Pro (Lydie L)/B70417000K.SM3: 
   [testng] [2024-11-13 01:54:27,973] [pool-1-thread-12] Initializing /data/steve/Molecular Imaging/Mol Imag v5.2 (Steve Higgins)/015.STP: 
   [testng] [2024-11-13 01:54:28,272] [pool-1-thread-10] Initializing /data/steve/RHK Tech/RHK STS (Peter Sloan)/B50303AS.SM2: 
   [testng] [2024-11-13 01:54:30,120] [pool-1-thread-5] Initializing /data/steve/JEOL/JSM (Inger Ekvell)/g11@0.IMG: 
   [testng] [2024-11-13 01:54:30,583] [pool-1-thread-8] Initializing /data/steve/Misc SXM test images/AVI movie/Clean Cu(110) LEED.avi: 
   [testng] [2024-11-13 01:54:31,036] [pool-1-thread-1] Initializing /data/steve/Misc SXM test images/Chromosome images/HKGmaizeMei3.pict: 
   [testng] [2024-11-13 01:54:31,665] [pool-1-thread-4] Initializing /data/steve/JEOL/WinSem (Sue)/Shuttle tile ceramic/SHUTTLEB.IMG: 
   [testng] [2024-11-13 01:54:32,232] [pool-1-thread-12] Initializing /data/steve/Seiko Instr (Hwansoo)/05808001.xqd: 
   [testng] [2024-11-13 01:54:32,661] [pool-1-thread-7] Initializing /data/steve/Molecular Imaging/Mol Imag v5.2 (Steve Higgins)/014.STP: 
   [testng] [2024-11-13 01:54:33,046] [pool-1-thread-10] Initializing /data/steve/TopoMetrix/Topo STM v4 (Gabriella)/159HF02.ZFP: 
   [testng] [2024-11-13 01:54:33,393] [pool-1-thread-2] Initializing /data/steve/Quesant Instr/Quesant v1.2 (Marc F)/stm3.afm: 
   [testng] [2024-11-13 01:54:33,739] [pool-1-thread-9] Initializing /data/steve/Philips (Markus G)/135-30.IMG: 
   [testng] [2024-11-13 01:54:34,887] [pool-1-thread-3] Initializing /data/steve/Leica TCS (Keith B)/25_5BB.SXM: 
   [testng] [2024-11-13 01:54:36,458] [pool-1-thread-8] Initializing /data/steve/TIFF/Macrophage cell images/Pre-d-0 1392 36-bit.tif: 
   [testng] [2024-11-13 01:54:36,961] [pool-1-thread-1] Initializing /data/steve/TopoMetrix/Topo STM v5 (Ewald B)/c80-50.zfr: 
   [testng] [2024-11-13 01:54:37,811] [pool-1-thread-5] Initializing /data/steve/JPK Instr (Christian L)/Virus.jpk: 
   [testng] [2024-11-13 01:54:38,524] [pool-1-thread-11] Initializing /data/steve/Molecular Imaging/Mol Imag v4.18 (Reinat)/car-mac-con-g_003.STP: 
   [testng] [2024-11-13 01:54:38,891] [pool-1-thread-6] Initializing /data/steve/RHK Tech/RHK (Mark Flowers)/Demo04.sm2: 
   [testng] 
   [testng] ===============================================
   [testng] Bio-Formats software test suite
   [testng] Total tests run: 8480, Failures: 0, Skips: 0
   [testng] ===============================================
   [testng] 

BUILD SUCCESSFUL
Total time: 8 minutes 23 seconds
Finished: SUCCESS