Started by upstream project "BIOFORMATS-test-repo" build number 257
originally caused by:
Started by upstream project "Trigger" build number 281
originally caused by:
Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@6
[BIOFORMATS-test-folder@6] $ /bin/bash -xe /tmp/jenkins3404777987310749266.sh
+ '[' fv1000 = slidebook ']'
++ date +%u
+ '[' 6 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_40506_merge_ci -v /uod/idr/repos/curated/fv1000:/data -v /uod/idr-scratch/merge-ci/curated/fv1000:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
[echo] isSnapshot = true
init-title:
[echo] ----------=========== bio-formats-testing-framework ===========----------
init-timestamp:
init:
copy-resources:
compile:
[resolver:resolve] Resolving artifacts
compile-tests:
[resolver:resolve] Resolving artifacts
[javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
[javac] warning: [options] bootstrap class path not set in conjunction with -source 8
[javac] 1 warning
test-automated:
[testng] WARNING: An illegal reflective access operation has occurred
[testng] WARNING: Illegal reflective access by org.kohsuke.file_leak_detector.Listener (file:/home/build/.m2/repository/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar) to field java.net.SocketImpl.socket
[testng] WARNING: Please consider reporting this to the maintainers of org.kohsuke.file_leak_detector.Listener
[testng] WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations
[testng] WARNING: All illegal access operations will be denied in a future release
[testng] File leak detector installed
[testng] 00:43:08,327 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
[testng] 00:43:08,328 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - No custom configurators were discovered as a service.
[testng] 00:43:08,328 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 00:43:08,329 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 00:43:08,330 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
[testng] 00:43:08,330 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
[testng] 00:43:08,330 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
[testng] 00:43:08,330 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 00:43:08,331 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 00:43:08,331 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
[testng] 00:43:08,332 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
[testng] 00:43:08,332 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
[testng] 00:43:08,516 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
[testng] 00:43:08,517 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
[testng] 00:43:08,540 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
[testng] 00:43:08,540 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
[testng] 00:43:08,547 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
[testng] 00:43:08,547 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
[testng] 00:43:08,547 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
[testng] 00:43:08,547 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
[testng] 00:43:08,548 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@45099dd3 - End of configuration.
[testng] 00:43:08,548 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@60099951 - Registering current configuration as safe fallback point
[testng] 00:43:08,548 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 217 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
[testng] [2024-11-16 00:43:08,557] [main] java.version = 11.0.16
[testng] 00:43:08,561 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
[testng] 00:43:08,561 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:43:08,604 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-11-16_00-43-08.log]
[testng] 00:43:08,605 |-INFO in ch.qos.logback.core.sift.SiftProcessor@21be3395 - End of configuration.
[testng] [2024-11-16 00:43:08,607] [main] testng.directory = /data
[testng] [2024-11-16 00:43:08,607] [main] testng.configDirectory = /config
[testng] [2024-11-16 00:43:08,617] [main] testng.multiplier = 1.0
[testng] [2024-11-16 00:43:08,618] [main] testng.in-memory = false
[testng] [2024-11-16 00:43:08,618] [main] testng.allow-missing = false
[testng] [2024-11-16 00:43:08,618] [main] user.language = en
[testng] [2024-11-16 00:43:08,619] [main] user.country = ${user.country}
[testng] [2024-11-16 00:43:08,619] [main] Maximum heap size = 15360 MB
[testng] Scanning for files...
[testng] [2024-11-16 00:43:22,110] [main] ----------------------------------------
[testng] [2024-11-16 00:43:22,110] [main] Total files: 259
[testng] [2024-11-16 00:43:22,110] [main] Scan time: 13.491 s (52 ms/file)
[testng] [2024-11-16 00:43:22,110] [main] ----------------------------------------
[testng] Building list of tests...
[testng] Ready to test 144 files
[testng] [TestNG] Running:
[testng] Bio-Formats software test suite
[testng]
[testng] [2024-11-16 00:49:33,498] [pool-1-thread-1] Initializing /data/brian/CagedATP CaG7.oib:
[testng] 00:49:33,498 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
[testng] 00:49:33,499 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:49:33,501 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-11-16_00-49-33.log]
[testng] 00:49:33,501 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4ac65dca - End of configuration.
[testng] [2024-11-16 00:49:33,774] [pool-1-thread-12] Initializing /data/aryeh/030408 2 1.oib:
[testng] 00:49:33,774 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
[testng] 00:49:33,774 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:49:33,775 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-11-16_00-49-33.log]
[testng] 00:49:33,776 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4d2bd71e - End of configuration.
[testng] [2024-11-16 00:49:34,100] [pool-1-thread-11] Initializing /data/molly/13SH2bUTRtime4b.oib:
[testng] 00:49:34,100 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
[testng] 00:49:34,100 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:49:34,101 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-11-16_00-49-34.log]
[testng] 00:49:34,101 |-INFO in ch.qos.logback.core.sift.SiftProcessor@656b4af5 - End of configuration.
[testng] [2024-11-16 00:49:34,567] [pool-1-thread-10] Initializing /data/marc/V0606J.oib:
[testng] 00:49:34,567 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
[testng] 00:49:34,567 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:49:34,568 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-11-16_00-49-34.log]
[testng] 00:49:34,568 |-INFO in ch.qos.logback.core.sift.SiftProcessor@cd1c8f7 - End of configuration.
[testng] [2024-11-16 00:49:36,221] [pool-1-thread-9] Initializing /data/johannes/step4.bmp:
[testng] 00:49:36,221 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
[testng] 00:49:36,221 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:49:36,222 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-11-16_00-49-36.log]
[testng] 00:49:36,222 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1c2920c5 - End of configuration.
[testng] [2024-11-16 00:49:36,259] [pool-1-thread-8] Initializing /data/karl/Image0009.oib:
[testng] 00:49:36,259 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
[testng] 00:49:36,259 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:49:36,260 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-11-16_00-49-36.log]
[testng] 00:49:36,260 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7827d015 - End of configuration.
[testng] [2024-11-16 00:49:36,424] [pool-1-thread-7] Initializing /data/aryeh/naomi/Brain 2 he1d 1.oib:
[testng] 00:49:36,424 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
[testng] 00:49:36,424 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:49:36,424 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-11-16_00-49-36.log]
[testng] 00:49:36,425 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4f97447d - End of configuration.
[testng] [2024-11-16 00:49:36,920] [pool-1-thread-6] Initializing /data/aryeh/061010 plate 1/Image0002_07.oib:
[testng] 00:49:36,920 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
[testng] 00:49:36,920 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:49:36,921 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-11-16_00-49-36.log]
[testng] 00:49:36,921 |-INFO in ch.qos.logback.core.sift.SiftProcessor@51f371ca - End of configuration.
[testng] [2024-11-16 00:49:37,371] [pool-1-thread-5] Initializing /data/molly/11OCT2.OIF:
[testng] 00:49:37,371 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
[testng] 00:49:37,371 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:49:37,372 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-11-16_00-49-37.log]
[testng] 00:49:37,372 |-INFO in ch.qos.logback.core.sift.SiftProcessor@809be87 - End of configuration.
[testng] [2024-11-16 00:49:43,533] [pool-1-thread-4] Initializing /data/shane/Data Subset/MHC1_control.oif:
[testng] 00:49:43,533 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
[testng] 00:49:43,533 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:49:43,534 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-11-16_00-49-43.log]
[testng] 00:49:43,535 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1fe1045c - End of configuration.
[testng] [2024-11-16 00:49:43,836] [pool-1-thread-3] Initializing /data/glen/15min 200neo lyso SO1.oib:
[testng] 00:49:43,836 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
[testng] 00:49:43,836 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:49:43,836 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-11-16_00-49-43.log]
[testng] 00:49:43,837 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7e9abce8 - End of configuration.
[testng] [2024-11-16 00:49:44,144] [pool-1-thread-2] Initializing /data/brian/Lambda10nm.oib:
[testng] 00:49:44,144 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
[testng] 00:49:44,144 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:49:44,145 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-11-16_00-49-44.log]
[testng] 00:49:44,145 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4d366103 - End of configuration.
[testng] [2024-11-16 00:49:46,918] [pool-1-thread-9] Initializing /data/jcb/200909024/Sup Fig 2/2.oib:
[testng] [2024-11-16 00:49:47,388] [pool-1-thread-8] Initializing /data/glen/simulstack.oif:
[testng] [2024-11-16 00:49:48,659] [pool-1-thread-2] Initializing /data/molly/11OCT4.OIF:
[testng] [2024-11-16 00:49:53,178] [pool-1-thread-1] Initializing /data/brian/MitoRed-POPO3.oib:
[testng] [2024-11-16 00:49:53,648] [pool-1-thread-3] Initializing /data/glen/notsaturated.oib:
[testng] [2024-11-16 00:49:54,161] [pool-1-thread-12] Initializing /data/barbara/Image_with_working_import.oib:
[testng] [2024-11-16 00:49:54,396] [pool-1-thread-7] Initializing /data/brian/NEURON_TIMELAPS_2.oib:
[testng] [2024-11-16 00:49:55,060] [pool-1-thread-11] Initializing /data/glen/simulstack.oib:
[testng] [2024-11-16 00:49:55,980] [pool-1-thread-6] Initializing /data/brian/Caged Glu-3 point.oib:
[testng] [2024-11-16 00:49:58,058] [pool-1-thread-9] Initializing /data/david/Image0016.oif:
[testng] [2024-11-16 00:49:58,955] [pool-1-thread-12] Initializing /data/stefan/cytosol_08b.oif:
[testng] [2024-11-16 00:50:03,074] [pool-1-thread-11] Initializing /data/stefan/test-with-stefan071024.oib:
[testng] [2024-11-16 00:50:04,736] [pool-1-thread-1] Initializing /data/aryeh/PIP2 ESCV control Z 1.oib:
[testng] [2024-11-16 00:50:05,548] [pool-1-thread-3] Initializing /data/shane/Data Subset/EX5-10 fresh sol.oib:
[testng] [2024-11-16 00:50:05,934] [pool-1-thread-7] Initializing /data/qa-17748/Image0098.oib:
[testng] [2024-11-16 00:50:06,268] [pool-1-thread-6] Initializing /data/chris/missegragation-15.oib:
[testng] [2024-11-16 00:50:06,637] [pool-1-thread-4] Initializing /data/simon/used_to_work.oib:
[testng] [2024-11-16 00:50:07,283] [pool-1-thread-10] Initializing /data/brian/LILY POLLEN.oib:
[testng] [2024-11-16 00:50:10,235] [pool-1-thread-6] Initializing /data/johannes/step5b.bmp:
[testng] [2024-11-16 00:50:10,346] [pool-1-thread-7] Initializing /data/johannes/Image0010/Image0010.oif:
[testng] [2024-11-16 00:50:11,080] [pool-1-thread-3] Initializing /data/molly/11OCT10.OIF:
[testng] [2024-11-16 00:50:20,241] [pool-1-thread-4] Initializing /data/molly/11OCT9.OIF:
[testng] [2024-11-16 00:50:31,485] [pool-1-thread-1] Initializing /data/ramon/Image_01_01_01_01.oif:
[testng] [2024-11-16 00:50:32,286] [pool-1-thread-10] Initializing /data/stefan/121206_IHC_Ncad_647_in_515_WT_36hpf_e1.oib:
[testng] [2024-11-16 00:50:32,749] [pool-1-thread-6] Initializing /data/stefan/yc2_live-03.oib:
[testng] [2024-11-16 00:50:36,227] [pool-1-thread-10] Initializing /data/johannes/Image0006/Image0006.oif:
[testng] [2024-11-16 00:50:37,254] [pool-1-thread-11] Initializing /data/shane/Data Subset/EX5-10 fresh plan.oib:
[testng] [2024-11-16 00:50:41,107] [pool-1-thread-11] Initializing /data/molly/11OCT3.OIF:
[testng] [2024-11-16 00:51:13,883] [pool-1-thread-6] Initializing /data/molly/11OCT7.OIF:
[testng] [2024-11-16 00:51:22,889] [pool-1-thread-9] Initializing /data/johannes/Image0016/Image0016.oif:
[testng] [2024-11-16 00:52:21,958] [pool-1-thread-1] Initializing /data/aryeh/PIP2 ESCV Z 1 after.oib:
[testng] [2024-11-16 00:52:24,079] [pool-1-thread-7] Initializing /data/allan/62909#1.oib:
[testng] [2024-11-16 00:52:24,422] [pool-1-thread-10] Initializing /data/alex/31h_pea3_fgf10_01_1.oif:
[testng] [2024-11-16 00:52:28,452] [pool-1-thread-7] Initializing /data/molly/11OCT5.OIF:
[testng] [2024-11-16 00:52:38,245] [pool-1-thread-1] Initializing /data/qa-17748/Image0079.oib:
[testng] [2024-11-16 00:52:41,431] [pool-1-thread-1] Initializing /data/aryeh/BP3 3h ch2.oif:
[testng] [2024-11-16 00:53:49,698] [pool-1-thread-9] Initializing /data/tom/RGB-1.avi:
[testng] [2024-11-16 00:53:52,493] [pool-1-thread-9] Initializing /data/glen/singleseqframe.oif:
[testng] [2024-11-16 00:54:36,448] [pool-1-thread-9] Initializing /data/aryeh/061010 plate 1/Image0002_01.oib:
[testng] [2024-11-16 00:54:43,383] [pool-1-thread-9] Initializing /data/jae/Image0001.oib:
[testng] [2024-11-16 00:54:49,953] [pool-1-thread-9] Initializing /data/shane/Data Subset/Ex3sol.oif:
[testng] [2024-11-16 00:55:28,458] [pool-1-thread-9] Initializing /data/brian/PA-GFPv-2.oib:
[testng] [2024-11-16 00:55:36,565] [pool-1-thread-9] Initializing /data/glen/singlesimul.oif:
[testng] [2024-11-16 00:56:29,942] [pool-1-thread-9] Initializing /data/jcb/200909024/Sup Fig 2/4.oib:
[testng] [2024-11-16 00:56:35,685] [pool-1-thread-9] Initializing /data/michael/CELL3.oib:
[testng] [2024-11-16 00:56:40,322] [pool-1-thread-9] Initializing /data/simon/never_worked.oib:
[testng] [2024-11-16 00:56:45,706] [pool-1-thread-9] Initializing /data/aryeh/control_test.oib:
[testng] [2024-11-16 00:57:15,913] [pool-1-thread-9] Initializing /data/brian/lambda02nm.oib:
[testng] [2024-11-16 00:57:21,713] [pool-1-thread-9] Initializing /data/stephane/817A_3-0003_01.oib:
[testng] [2024-11-16 00:57:27,191] [pool-1-thread-9] Initializing /data/johannes/step1.bmp:
[testng] [2024-11-16 00:57:29,676] [pool-1-thread-9] Initializing /data/dan/outerEV1solu6new.oib:
[testng] [2024-11-16 00:57:35,881] [pool-1-thread-9] Initializing /data/brian/CagedATP CaG7a.oib:
[testng] [2024-11-16 00:57:40,805] [pool-1-thread-9] Initializing /data/yoshihito/XY.oif:
[testng] [2024-11-16 00:58:01,945] [pool-1-thread-9] Initializing /data/lavinia/NM1-RibA-RibB-side.oib:
[testng] [2024-11-16 00:58:08,153] [pool-1-thread-9] Initializing /data/kashif/OIF_V1/Sample_XYZ.oif:
[testng] [2024-11-16 01:00:18,041] [pool-1-thread-8] Initializing /data/glen/111407.oif:
[testng] [2024-11-16 01:03:27,158] [pool-1-thread-2] Initializing /data/brian/FLIP.oib:
[testng] [2024-11-16 01:03:33,049] [pool-1-thread-2] Initializing /data/glen/QuitIJ/06-1728brnc3my.oib:
[testng] [2024-11-16 01:03:40,435] [pool-1-thread-2] Initializing /data/shane/Data Subset/EXX7-10G30% .oib:
[testng] [2024-11-16 01:03:41,106] [pool-1-thread-10] Initializing /data/jean-claude/villositerat0heurea.oib:
[testng] [2024-11-16 01:03:45,186] [pool-1-thread-10] Initializing /data/glen/Null file/test change.oif:
[testng] [2024-11-16 01:03:47,537] [pool-1-thread-2] Initializing /data/aryeh/061010 plate 1/Image0002_04.oib:
[testng] [2024-11-16 01:03:53,988] [pool-1-thread-2] Initializing /data/molly/11OCT8.OIF:
[testng] [2024-11-16 01:04:19,136] [pool-1-thread-10] Initializing /data/paul/Day 4 1 FBS flat - cell 6 - green.oib:
[testng] [2024-11-16 01:04:23,154] [pool-1-thread-10] Initializing /data/bojana/XYT_FirstBolus.oib:
[testng] [2024-11-16 01:04:26,903] [pool-1-thread-10] Initializing /data/molly/11OCT6.OIF:
[testng] [2024-11-16 01:05:53,623] [pool-1-thread-9] Initializing /data/glen/singlesimul.oib:
[testng] [2024-11-16 01:05:57,350] [pool-1-thread-6] Initializing /data/daniel/M1(0 0 146)-r1-drift8_3-6-3s_4Hz_0.006cpp_fillfact-0.25-0.488mspl-3x.oib:
[testng] [2024-11-16 01:06:02,832] [pool-1-thread-9] Initializing /data/christian/20min.oif:
[testng] [2024-11-16 01:06:20,141] [pool-1-thread-9] Initializing /data/marc/V0606L.oib:
[testng] [2024-11-16 01:06:36,135] [pool-1-thread-6] Initializing /data/kashif/OIF_V2/Sample_XYZ.oif:
[testng] [2024-11-16 01:06:40,497] [pool-1-thread-9] Initializing /data/shane/Data Subset/NESTIN_control2.oif:
[testng] [2024-11-16 01:06:59,192] [pool-1-thread-9] Initializing /data/johannes/step4b.bmp:
[testng] [2024-11-16 01:07:00,902] [pool-1-thread-9] Initializing /data/barbara/Image_with_failed_import.oib:
[testng] [2024-11-16 01:07:03,456] [pool-1-thread-9] Initializing /data/aryeh/1h.oib:
[testng] [2024-11-16 01:07:10,751] [pool-1-thread-9] Initializing /data/brian/PA-GFP-3.oib:
[testng] [2024-11-16 01:07:15,541] [pool-1-thread-9] Initializing /data/glen/QuitIJ/4202A2chtest.oif:
[testng] [2024-11-16 01:07:23,220] [pool-1-thread-12] Initializing /data/johannes/Image0006/Image0006.oif.files/Image0006_Thumb.bmp:
[testng] [2024-11-16 01:07:24,132] [pool-1-thread-12] Initializing /data/david/Image0016.oib:
[testng] [2024-11-16 01:07:26,777] [pool-1-thread-12] Initializing /data/monica/Image0056.oif:
[testng] [2024-11-16 01:07:27,610] [pool-1-thread-7] Initializing /data/glen/Image0002.oif:
[testng] [2024-11-16 01:08:02,803] [pool-1-thread-12] Initializing /data/brian/Kaede-Neuron-9 405XYZ1.oib:
[testng] [2024-11-16 01:08:08,621] [pool-1-thread-12] Initializing /data/yasunori/series_1.oib:
[testng] [2024-11-16 01:08:14,006] [pool-1-thread-12] Initializing /data/aryeh/1h_after_pdt.oib:
[testng] [2024-11-16 01:08:42,559] [pool-1-thread-12] Initializing /data/brian/CagedATP CaG+FuraR3_a.oib:
[testng] [2024-11-16 01:08:47,015] [pool-1-thread-12] Initializing /data/aryeh/061010 plate 1/Image0002_09.oib:
[testng] [2024-11-16 01:08:53,109] [pool-1-thread-12] Initializing /data/johannes/step3.bmp:
[testng] [2024-11-16 01:08:57,350] [pool-1-thread-12] Initializing /data/satoshi/60x_5x_1.oif:
[testng] [2024-11-16 01:10:41,499] [pool-1-thread-3] Initializing /data/brian/Kaede-Neuron-9XYZ.oib:
[testng] [2024-11-16 01:10:48,905] [pool-1-thread-3] Initializing /data/kay/IM2pg.oib:
[testng] [2024-11-16 01:10:55,852] [pool-1-thread-3] Initializing /data/aryeh/061010 plate 1/Image0002_02.oib:
[testng] [2024-11-16 01:10:56,667] [pool-1-thread-8] Initializing /data/francesco/fGfp.c15.oib:
[testng] [2024-11-16 01:11:01,004] [pool-1-thread-8] Initializing /data/brian/Al488-yoyo1-2.oib:
[testng] [2024-11-16 01:11:02,818] [pool-1-thread-3] Initializing /data/glen/4205basal106072.oif:
[testng] [2024-11-16 01:11:11,620] [pool-1-thread-8] Initializing /data/aryeh/naomi/Brain 2 he1d 1.oif:
[testng] [2024-11-16 01:12:24,661] [pool-1-thread-12] Initializing /data/aryeh/061010 plate 1/Image0002_10.oib:
[testng] [2024-11-16 01:12:34,519] [pool-1-thread-12] Initializing /data/glen/seqlinestack.oif:
[testng] [2024-11-16 01:14:10,433] [pool-1-thread-6] Initializing /data/stefan/YC2_spectrum-405.oib:
[testng] [2024-11-16 01:14:17,103] [pool-1-thread-6] Initializing /data/glen/singleseqframe.oib:
[testng] [2024-11-16 01:14:23,223] [pool-1-thread-6] Initializing /data/allan/new_30min3_1z2.oib:
[testng] [2024-11-16 01:14:29,701] [pool-1-thread-6] Initializing /data/pedro/plv-test.oib:
[testng] [2024-11-16 01:14:36,172] [pool-1-thread-6] Initializing /data/glen/LUT issue/60x11.oif:
[testng] [2024-11-16 01:18:55,497] [pool-1-thread-9] Initializing /data/glen/ticket-10092/tbn 02-10-12 D7 DT 8300 1.oif:
[testng] [2024-11-16 01:21:10,010] [pool-1-thread-5] Initializing /data/brian/Rhodamine-PI-1.oib:
[testng] [2024-11-16 01:21:20,466] [pool-1-thread-5] Initializing /data/yoshihito/XY.oib:
[testng] [2024-11-16 01:21:29,590] [pool-1-thread-5] Initializing /data/shane/Data Subset/EXX6-10G30%.oib:
[testng] [2024-11-16 01:21:38,784] [pool-1-thread-5] Initializing /data/stefan/cytosol_03e.oib:
[testng] [2024-11-16 01:21:51,449] [pool-1-thread-5] Initializing /data/dan/EGFR-GFP_ptyr-555 FRET test.oib:
[testng] [2024-11-16 01:21:58,567] [pool-1-thread-5] Initializing /data/glen/seqlinestack.oib:
[testng] [2024-11-16 01:22:07,472] [pool-1-thread-5] Initializing /data/sten/01.oib:
[testng] [2024-11-16 01:22:14,657] [pool-1-thread-5] Initializing /data/public/imagesc-71616/20220824_4492_cord_dapi__iba568_60x.oib:
[testng] [2024-11-16 01:22:22,760] [pool-1-thread-5] Initializing /data/johannes/step2.bmp:
[testng] [2024-11-16 01:22:26,088] [pool-1-thread-5] Initializing /data/stefan/cytosol_01a.oif:
[testng] [2024-11-16 01:25:07,046] [pool-1-thread-4] Initializing /data/aryeh/061010 plate 1/Image0002_03.oib:
[testng] [2024-11-16 01:25:13,888] [pool-1-thread-4] Initializing /data/brian/CFP-GFP2.oib:
[testng] [2024-11-16 01:25:19,538] [pool-1-thread-4] Initializing /data/glen/Null file/test no change.oif:
[testng] [2024-11-16 01:25:52,377] [pool-1-thread-4] Initializing /data/brian/CagedATP CaG+FuraR3.oib:
[testng] [2024-11-16 01:25:57,954] [pool-1-thread-4] Initializing /data/aryeh/061010 plate 1/Image0002_06.oib:
[testng] [2024-11-16 01:26:04,846] [pool-1-thread-4] Initializing /data/glen/singleseqline.oib:
[testng] [2024-11-16 01:26:09,567] [pool-1-thread-4] Initializing /data/shane/Data Subset/EXX4-10G40%.oib:
[testng] [2024-11-16 01:26:14,300] [pool-1-thread-4] Initializing /data/glen/QuitIJ/4202A2chtest.oib:
[testng] [2024-11-16 01:26:19,287] [pool-1-thread-4] Initializing /data/glen/singleseqline.oif:
[testng] [2024-11-16 01:26:20,295] [pool-1-thread-2] Initializing /data/glen/LUT issue/UVgreenredfarred.oif:
[testng] [2024-11-16 01:26:47,854] [pool-1-thread-7] Initializing /data/aryeh/061010 plate 1/Image0002_05.oib:
[testng] [2024-11-16 01:26:54,763] [pool-1-thread-7] Initializing /data/molly/11OCT11.OIF:
[testng] [2024-11-16 01:27:12,773] [pool-1-thread-4] Initializing /data/brian/Kaede15.oib:
[testng] [2024-11-16 01:27:14,989] [pool-1-thread-2] Initializing /data/tom/zseries-test.oib:
[testng] [2024-11-16 01:27:20,577] [pool-1-thread-4] Initializing /data/glen/notsaturated.oif:
[testng] [2024-11-16 01:27:25,005] [pool-1-thread-2] Initializing /data/lavinia/NM1-RibB-NeuroD-uninjected.oib:
[testng] [2024-11-16 01:27:30,401] [pool-1-thread-2] Initializing /data/johannes/Image0010/Image0010.oif.files/Image0010_Thumb.bmp:
[testng] [2024-11-16 01:27:32,000] [pool-1-thread-2] Initializing /data/aryeh/061010 plate 1/Image0002_08.oib:
[testng] [2024-11-16 01:27:41,371] [pool-1-thread-2] Initializing /data/glen/LUT issue/Greenredfarred.oif:
[testng] 01:58:16,438 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
[testng] 01:58:16,438 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:58:16,440 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-11-16_01-58-16.log]
[testng] 01:58:16,440 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3eeee95f - End of configuration.
[testng] 02:43:22,187 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
[testng] 02:43:22,187 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:43:22,189 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-11-16_02-43-22.log]
[testng] 02:43:22,189 |-INFO in ch.qos.logback.core.sift.SiftProcessor@f116270 - End of configuration.
[testng]
[testng] ===============================================
[testng] Bio-Formats software test suite
[testng] Total tests run: 7632, Failures: 0, Skips: 0
[testng] ===============================================
[testng]
BUILD SUCCESSFUL
Total time: 120 minutes 17 seconds
Finished: SUCCESS