Started by upstream project "BIOFORMATS-test-repo" build number 257
originally caused by:
Started by upstream project "Trigger" build number 281
originally caused by:
Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@7
[BIOFORMATS-test-folder@7] $ /bin/bash -xe /tmp/jenkins16069660095601974676.sh
+ '[' zeiss-tiff = slidebook ']'
++ date +%u
+ '[' 6 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_40593_merge_ci -v /uod/idr/repos/curated/zeiss-tiff:/data -v /uod/idr-scratch/merge-ci/curated/zeiss-tiff:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
[echo] isSnapshot = true
init-title:
[echo] ----------=========== bio-formats-testing-framework ===========----------
init-timestamp:
init:
copy-resources:
compile:
[resolver:resolve] Resolving artifacts
compile-tests:
[resolver:resolve] Resolving artifacts
[javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
[javac] warning: [options] bootstrap class path not set in conjunction with -source 8
[javac] 1 warning
test-automated:
[testng] WARNING: An illegal reflective access operation has occurred
[testng] WARNING: Illegal reflective access by org.kohsuke.file_leak_detector.Listener (file:/home/build/.m2/repository/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar) to field java.net.SocketImpl.socket
[testng] WARNING: Please consider reporting this to the maintainers of org.kohsuke.file_leak_detector.Listener
[testng] WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations
[testng] WARNING: All illegal access operations will be denied in a future release
[testng] File leak detector installed
[testng] 03:11:14,996 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
[testng] 03:11:14,998 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - No custom configurators were discovered as a service.
[testng] 03:11:14,998 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 03:11:14,998 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 03:11:14,999 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
[testng] 03:11:14,999 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
[testng] 03:11:14,999 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
[testng] 03:11:14,999 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 03:11:15,000 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 03:11:15,000 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
[testng] 03:11:15,001 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
[testng] 03:11:15,001 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
[testng] 03:11:15,171 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
[testng] 03:11:15,171 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
[testng] 03:11:15,191 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
[testng] 03:11:15,192 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
[testng] 03:11:15,197 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
[testng] 03:11:15,197 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
[testng] 03:11:15,197 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
[testng] 03:11:15,197 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
[testng] 03:11:15,197 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@45099dd3 - End of configuration.
[testng] 03:11:15,198 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@60099951 - Registering current configuration as safe fallback point
[testng] 03:11:15,198 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 198 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
[testng] [2024-11-16 03:11:15,206] [main] java.version = 11.0.16
[testng] 03:11:15,209 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
[testng] 03:11:15,209 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 03:11:15,250 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-11-16_03-11-15.log]
[testng] 03:11:15,251 |-INFO in ch.qos.logback.core.sift.SiftProcessor@21be3395 - End of configuration.
[testng] [2024-11-16 03:11:15,253] [main] testng.directory = /data
[testng] [2024-11-16 03:11:15,253] [main] testng.configDirectory = /config
[testng] [2024-11-16 03:11:15,262] [main] testng.multiplier = 1.0
[testng] [2024-11-16 03:11:15,263] [main] testng.in-memory = false
[testng] [2024-11-16 03:11:15,263] [main] testng.allow-missing = false
[testng] [2024-11-16 03:11:15,263] [main] user.language = en
[testng] [2024-11-16 03:11:15,263] [main] user.country = ${user.country}
[testng] [2024-11-16 03:11:15,263] [main] Maximum heap size = 15360 MB
[testng] Scanning for files...
[testng] [2024-11-16 03:12:15,348] [main] ----------------------------------------
[testng] [2024-11-16 03:12:15,348] [main] Total files: 15735
[testng] [2024-11-16 03:12:15,349] [main] Scan time: 60.085 s (3 ms/file)
[testng] [2024-11-16 03:12:15,349] [main] ----------------------------------------
[testng] Building list of tests...
[testng] Ready to test 125 files
[testng] [TestNG] Running:
[testng] Bio-Formats software test suite
[testng]
[testng] [2024-11-16 03:13:17,617] [pool-1-thread-1] Initializing /data/qa-21570/250618_J1_diff_D3-2-0002.tif:
[testng] 03:13:17,618 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
[testng] 03:13:17,618 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 03:13:17,620 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-11-16_03-13-17.log]
[testng] 03:13:17,621 |-INFO in ch.qos.logback.core.sift.SiftProcessor@12501f13 - End of configuration.
[testng] [2024-11-16 03:13:18,025] [pool-1-thread-12] Initializing /data/converted/jeffrey/750-30-03.tif:
[testng] 03:13:18,025 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
[testng] 03:13:18,025 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 03:13:18,027 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-11-16_03-13-18.log]
[testng] 03:13:18,027 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6bf6e8cd - End of configuration.
[testng] [2024-11-16 03:13:18,415] [pool-1-thread-11] Initializing /data/converted/shalin/ibidiuslide1-timelapse3_mid2.tif:
[testng] 03:13:18,415 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
[testng] 03:13:18,415 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 03:13:18,416 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-11-16_03-13-18.log]
[testng] 03:13:18,416 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4a7bf796 - End of configuration.
[testng] [2024-11-16 03:13:18,850] [pool-1-thread-10] Initializing /data/converted/susan/BY4741NQ2.tif:
[testng] 03:13:18,850 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
[testng] 03:13:18,850 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 03:13:18,851 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-11-16_03-13-18.log]
[testng] 03:13:18,851 |-INFO in ch.qos.logback.core.sift.SiftProcessor@647b8645 - End of configuration.
[testng] [2024-11-16 03:13:19,261] [pool-1-thread-9] Initializing /data/converted/rolf/example_1-2010_11_25.tif:
[testng] 03:13:19,262 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
[testng] 03:13:19,262 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 03:13:19,262 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-11-16_03-13-19.log]
[testng] 03:13:19,263 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7142e20c - End of configuration.
[testng] [2024-11-16 03:13:19,633] [pool-1-thread-8] Initializing /data/converted/dietmar/137.tif:
[testng] 03:13:19,633 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
[testng] 03:13:19,633 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 03:13:19,633 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-11-16_03-13-19.log]
[testng] 03:13:19,634 |-INFO in ch.qos.logback.core.sift.SiftProcessor@314e1183 - End of configuration.
[testng] [2024-11-16 03:13:20,235] [pool-1-thread-7] Initializing /data/converted/markus/Branchiostoma_6x12_MosaiX_Tiles_color.tif:
[testng] 03:13:20,235 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
[testng] 03:13:20,235 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 03:13:20,236 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-11-16_03-13-20.log]
[testng] 03:13:20,236 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6a6c0038 - End of configuration.
[testng] [2024-11-16 03:13:20,705] [pool-1-thread-6] Initializing /data/converted/thomas/test_axiocam_3_1.tif:
[testng] 03:13:20,706 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
[testng] 03:13:20,706 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 03:13:20,706 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-11-16_03-13-20.log]
[testng] 03:13:20,707 |-INFO in ch.qos.logback.core.sift.SiftProcessor@190b907d - End of configuration.
[testng] [2024-11-16 03:13:21,070] [pool-1-thread-5] Initializing /data/converted/markus/PC12_neuroblastoma_Fura2_exp#9.tif:
[testng] 03:13:21,071 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
[testng] 03:13:21,071 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 03:13:21,071 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-11-16_03-13-21.log]
[testng] 03:13:21,071 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4fa40cf8 - End of configuration.
[testng] [2024-11-16 03:13:22,059] [pool-1-thread-4] Initializing /data/converted/joseph/E-2009-0001a.tif:
[testng] 03:13:22,059 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
[testng] 03:13:22,059 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 03:13:22,060 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-11-16_03-13-22.log]
[testng] 03:13:22,060 |-INFO in ch.qos.logback.core.sift.SiftProcessor@68b92c50 - End of configuration.
[testng] [2024-11-16 03:13:22,516] [pool-1-thread-3] Initializing /data/converted/darren/section0002_w1.tif:
[testng] 03:13:22,516 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
[testng] 03:13:22,516 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 03:13:22,517 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-11-16_03-13-22.log]
[testng] 03:13:22,517 |-INFO in ch.qos.logback.core.sift.SiftProcessor@610952ef - End of configuration.
[testng] [2024-11-16 03:13:22,895] [pool-1-thread-2] Initializing /data/converted/markus/MosaiX_irregular_Z-stack_with_autofocus.tif:
[testng] 03:13:22,895 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
[testng] 03:13:22,895 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 03:13:22,896 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-11-16_03-13-22.log]
[testng] 03:13:22,896 |-INFO in ch.qos.logback.core.sift.SiftProcessor@34904ceb - End of configuration.
[testng] [2024-11-16 03:13:34,571] [pool-1-thread-1] Initializing /data/converted/eirinn/pharm3-saline2-0147_11.tif:
[testng] [2024-11-16 03:13:37,089] [pool-1-thread-10] Initializing /data/converted/dietmar/hmads-bac1-bac7-af488-rho-af647_pre-2006-03-30-0016.tif:
[testng] [2024-11-16 03:13:37,852] [pool-1-thread-9] Initializing /data/converted/strand/2Colors1Plane.tif:
[testng] [2024-11-16 03:13:38,732] [pool-1-thread-6] Initializing /data/converted/michel/d.tif:
[testng] [2024-11-16 03:13:39,457] [pool-1-thread-3] Initializing /data/scott/Slide133-08.tif:
[testng] [2024-11-16 03:13:40,285] [pool-1-thread-12] Initializing /data/converted/nicolas/image.tif:
[testng] [2024-11-16 03:13:52,983] [pool-1-thread-12] Initializing /data/converted/markus/Confidence_ratio_image_PC12_neuroblastoma_Fura2_exp#9-2.tif:
[testng] [2024-11-16 03:13:56,959] [pool-1-thread-3] Initializing /data/converted/markus/Material_color_image_HRc_microscanned_4x3K.tif:
[testng] [2024-11-16 03:13:58,921] [pool-1-thread-6] Initializing /data/converted/converted/damian-compressed.tif:
[testng] [2024-11-16 03:14:10,589] [pool-1-thread-9] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_9.tif:
[testng] [2024-11-16 03:14:11,514] [pool-1-thread-6] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_1.tif:
[testng] [2024-11-16 03:14:15,920] [pool-1-thread-3] Initializing /data/converted/sebastien/test.tif:
[testng] [2024-11-16 03:15:08,441] [pool-1-thread-10] Initializing /data/scott/Slide133-04.tif:
[testng] [2024-11-16 03:15:11,701] [pool-1-thread-11] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_12.tif:
[testng] [2024-11-16 03:15:26,123] [pool-1-thread-10] Initializing /data/qa-21570/20150421_HepG2_yH2AX_DAPI_0.5h_5GyDOWN_1512_cell04_SIR_ALX.dv_comp.tif:
[testng] [2024-11-16 03:15:33,259] [pool-1-thread-10] Initializing /data/converted/karsten/247096n3s3s9.tif:
[testng] [2024-11-16 03:16:47,745] [pool-1-thread-10] Initializing /data/converted/joseph/BEST_EXAMPLE_LONGER_EXPOSURE.tif:
[testng] [2024-11-16 03:17:08,260] [pool-1-thread-1] Initializing /data/converted/ville/MultiCh-RGB/pollen_rgb.tif:
[testng] [2024-11-16 03:17:22,266] [pool-1-thread-8] Initializing /data/qa-21570/250618_J1_diff_D3-2-0004.tif:
[testng] [2024-11-16 03:17:25,935] [pool-1-thread-1] Initializing /data/converted/rolf/example_2-2010_11_25.tif:
[testng] [2024-11-16 03:17:27,648] [pool-1-thread-10] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_13.tif:
[testng] [2024-11-16 03:17:35,757] [pool-1-thread-7] Initializing /data/converted/lior/live+cf5b.tif:
[testng] [2024-11-16 03:17:37,865] [pool-1-thread-8] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_24.tif:
[testng] [2024-11-16 03:17:43,326] [pool-1-thread-1] Initializing /data/converted/othmar/mozaic.tif:
[testng] [2024-11-16 03:18:00,204] [pool-1-thread-6] Initializing /data/converted/kelsey/432x342BW.tif:
[testng] [2024-11-16 03:18:02,993] [pool-1-thread-7] Initializing /data/converted/lior/live+cf2b.tif:
[testng] [2024-11-16 03:18:14,648] [pool-1-thread-6] Initializing /data/converted/markus/HeLa-Reggie-GFP_ZT_fast-DCV-CI-measured-PSF.tif:
[testng] [2024-11-16 03:18:32,181] [pool-1-thread-9] Initializing /data/converted/converted/wtzer_series76_z003_ch00.tif:
[testng] [2024-11-16 03:18:53,808] [pool-1-thread-7] Initializing /data/converted/dan/zstack_convalaria.tif:
[testng] [2024-11-16 03:18:59,843] [pool-1-thread-4] Initializing /data/othmar/mozaic.tif:
[testng] [2024-11-16 03:19:01,707] [pool-1-thread-9] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_23.tif:
[testng] [2024-11-16 03:19:06,595] [pool-1-thread-2] Initializing /data/converted/kelsey/650x514BW.tif:
[testng] [2024-11-16 03:19:31,518] [pool-1-thread-7] Initializing /data/converted/monica/Monica_elegans_movie.tif:
[testng] [2024-11-16 03:19:40,285] [pool-1-thread-2] Initializing /data/converted/markus/Mouse-newborn-panorama_JPEG_5percent_compressed.tif:
[testng] [2024-11-16 03:19:42,167] [pool-1-thread-3] Initializing /data/converted/cecilia/day 1 naked nb positive 1-2007-0055.tif:
[testng] [2024-11-16 03:20:25,754] [pool-1-thread-3] Initializing /data/converted/markus/Mouse-newborn-panorama.tif:
[testng] [2024-11-16 03:20:35,531] [pool-1-thread-2] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_14.tif:
[testng] [2024-11-16 03:20:54,931] [pool-1-thread-11] Initializing /data/converted/stephan/notok1.tif:
[testng] [2024-11-16 03:21:20,400] [pool-1-thread-3] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_21.tif:
[testng] [2024-11-16 03:21:51,107] [pool-1-thread-1] Initializing /data/converted/converted/mri-stack.tif:
[testng] [2024-11-16 03:22:15,008] [pool-1-thread-1] Initializing /data/converted/sebastien/F1.tif:
[testng] [2024-11-16 03:22:57,252] [pool-1-thread-11] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_2.tif:
[testng] [2024-11-16 03:23:12,743] [pool-1-thread-4] Initializing /data/converted/markus/HighSpeedParas.tif:
[testng] [2024-11-16 03:24:58,897] [pool-1-thread-10] Initializing /data/converted/michel/e.tif:
[testng] [2024-11-16 03:25:47,640] [pool-1-thread-8] Initializing /data/converted/vladan/vladan.tif:
[testng] [2024-11-16 03:25:52,823] [pool-1-thread-1] Initializing /data/converted/michel/b.tif:
[testng] [2024-11-16 03:25:58,988] [pool-1-thread-10] Initializing /data/converted/dietmar/hmads-bac1-bac7-af488-rho-af647_pre-2006-03-30-ten.tif:
[testng] [2024-11-16 03:26:24,766] [pool-1-thread-1] Initializing /data/converted/eirinn/demo-tile.tif:
[testng] [2024-11-16 03:26:59,603] [pool-1-thread-1] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_3.tif:
[testng] [2024-11-16 03:27:26,853] [pool-1-thread-9] Initializing /data/converted/karsten/Bild1.tif:
[testng] [2024-11-16 03:27:57,232] [pool-1-thread-9] Initializing /data/converted/converted/deconvolve6_pseudo_tl000_zs000.tif:
[testng] [2024-11-16 03:28:18,769] [pool-1-thread-9] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_22.tif:
[testng] [2024-11-16 03:28:22,566] [pool-1-thread-2] Initializing /data/converted/jan/SampleStack_Mosaic4x5_comb.tif:
[testng] [2024-11-16 03:28:51,075] [pool-1-thread-3] Initializing /data/converted/eirinn/11_10_2009-01-lcstim-15-10-09_position(1).tif:
[testng] [2024-11-16 03:29:29,245] [pool-1-thread-12] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_18.tif:
[testng] [2024-11-16 03:29:43,205] [pool-1-thread-10] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_25.tif:
[testng] [2024-11-16 03:29:53,005] [pool-1-thread-11] Initializing /data/converted/dietmar/138.tif:
[testng] [2024-11-16 03:31:05,124] [pool-1-thread-8] Initializing /data/converted/rachel/40K 30s A1.tif:
[testng] [2024-11-16 03:31:36,547] [pool-1-thread-8] Initializing /data/scott/Slide133-11.tif:
[testng] [2024-11-16 03:32:00,931] [pool-1-thread-8] Initializing /data/converted/darren/section0001_w1.tif:
[testng] [2024-11-16 03:32:15,846] [pool-1-thread-3] Initializing /data/converted/jonas/10_0907_multidrug-0001_AB01_08.tif:
[testng] [2024-11-16 03:32:25,364] [pool-1-thread-8] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast-widefield.tif:
[testng] [2024-11-16 03:33:39,078] [pool-1-thread-1] Initializing /data/converted/markus/Brain_high_dynamic_range_imaging_Z-stack.tif:
[testng] [2024-11-16 03:35:21,340] [pool-1-thread-9] Initializing /data/converted/michel/a.tif:
[testng] [2024-11-16 03:35:43,201] [pool-1-thread-9] Initializing /data/converted/othmar/z-stack.tif:
[testng] [2024-11-16 03:36:30,746] [pool-1-thread-11] Initializing /data/converted/dietmar/dapi-texasred-0015.tif:
[testng] [2024-11-16 03:36:48,073] [pool-1-thread-12] Initializing /data/samples/mri-stack/mri-stack.tif:
[testng] [2024-11-16 03:36:59,942] [pool-1-thread-1] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_11.tif:
[testng] [2024-11-16 03:37:13,772] [pool-1-thread-12] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_5.tif:
[testng] [2024-11-16 03:37:15,841] [pool-1-thread-10] Initializing /data/converted/eirinn/12_2_2009-16-hes5-brdu-proper_position(52).tif:
[testng] [2024-11-16 03:40:53,298] [pool-1-thread-10] Initializing /data/converted/converted/damian.tif:
[testng] [2024-11-16 03:41:18,638] [pool-1-thread-10] Initializing /data/converted/joseph/E-2009-0004.tif:
[testng] [2024-11-16 03:42:05,929] [pool-1-thread-11] Initializing /data/converted/markus/Hypocampus_Tiles_with_stiching.tif:
[testng] [2024-11-16 03:42:29,565] [pool-1-thread-8] Initializing /data/converted/converted/2chz.tif:
[testng] [2024-11-16 03:43:14,929] [pool-1-thread-5] Initializing /data/converted/converted/wtzer_series76_z003_ch00-with-rois.tif:
[testng] [2024-11-16 03:43:44,156] [pool-1-thread-5] Initializing /data/converted/eirinn/12_16_2009-01-tara-hd-triple-5to15_position(1)5.tif:
[testng] [2024-11-16 03:43:46,547] [pool-1-thread-6] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_4.tif:
[testng] [2024-11-16 03:44:32,281] [pool-1-thread-12] Initializing /data/converted/miso/Aufnahme-184058-0002.tif:
[testng] [2024-11-16 03:44:36,407] [pool-1-thread-1] Initializing /data/qa-21570/250618_J1_diff_D3-2-0003.tif:
[testng] [2024-11-16 03:44:58,854] [pool-1-thread-11] Initializing /data/converted/ville/MultiCh-RGB/pollen_bw.tif:
[testng] [2024-11-16 03:45:00,837] [pool-1-thread-12] Initializing /data/converted/eirinn/5_6_2009-dj9-03_a01_01.tif:
[testng] [2024-11-16 03:45:04,919] [pool-1-thread-1] Initializing /data/converted/dan/adultnr1.tif:
[testng] [2024-11-16 03:45:37,715] [pool-1-thread-11] Initializing /data/converted/james/Sylvain_run3_1Gy_Live7-2008-0019.tif:
[testng] [2024-11-16 03:45:52,014] [pool-1-thread-12] Initializing /data/converted/dietmar/hmads-24h-bac1-7-af647-af488-rho-1day-hyb-csk-2007-06-29-0008_position(113).tif:
[testng] [2024-11-16 03:45:55,795] [pool-1-thread-8] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_8.tif:
[testng] [2024-11-16 03:46:15,880] [pool-1-thread-1] Initializing /data/converted/converted/2chzt.tif:
[testng] [2024-11-16 03:47:38,960] [pool-1-thread-11] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_10.tif:
[testng] [2024-11-16 03:48:55,757] [pool-1-thread-3] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_15.tif:
[testng] [2024-11-16 03:49:49,549] [pool-1-thread-5] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_19.tif:
[testng] [2024-11-16 03:51:00,774] [pool-1-thread-10] Initializing /data/converted/markus/Long_TL_CElegans.tif:
[testng] [2024-11-16 03:51:04,489] [pool-1-thread-9] Initializing /data/converted/dietmar/hmads-bac1-bac7-af488-rho-af647_pre-2006-03-30-six.tif:
[testng] [2024-11-16 03:51:18,044] [pool-1-thread-6] Initializing /data/converted/michel/c.tif:
[testng] [2024-11-16 03:51:54,482] [pool-1-thread-6] Initializing /data/converted/rachel/40K 30s A2.tif:
[testng] [2024-11-16 03:52:28,273] [pool-1-thread-6] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_6.tif:
[testng] [2024-11-16 03:52:46,583] [pool-1-thread-2] Initializing /data/converted/joseph/Alike_best_example_but_WORKS_FINE_maybe_cause_shorter_expose.tif:
[testng] [2024-11-16 03:53:28,862] [pool-1-thread-12] Initializing /data/converted/markus/Smart_Experiment_4ch-T-time-stitched.tif:
[testng] [2024-11-16 03:53:41,145] [pool-1-thread-8] Initializing /data/converted/karsten/Bild2.tif:
[testng] [2024-11-16 03:54:18,973] [pool-1-thread-8] Initializing /data/scott/Slide133-01.tif:
[testng] [2024-11-16 03:54:43,014] [pool-1-thread-2] Initializing /data/converted/joseph/E-2009_0022.tif:
[testng] [2024-11-16 03:54:48,844] [pool-1-thread-8] Initializing /data/dorai/F_ZImage10_(X10)_C.tif:
[testng] [2024-11-16 03:54:54,563] [pool-1-thread-11] Initializing /data/converted/markus/30channels_exposure-series.tif:
[testng] [2024-11-16 03:55:19,743] [pool-1-thread-8] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast-sectioned.tif:
[testng] [2024-11-16 03:55:21,931] [pool-1-thread-9] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast.tif:
[testng] [2024-11-16 03:56:49,598] [pool-1-thread-3] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_16.tif:
[testng] [2024-11-16 03:57:14,102] [pool-1-thread-11] Initializing /data/converted/markus/Mouse-newborn-panorama_lossless_compressed.tif:
[testng] [2024-11-16 03:57:59,264] [pool-1-thread-11] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_17.tif:
[testng] [2024-11-16 03:58:16,617] [pool-1-thread-5] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast-sidebyside.tif:
[testng] [2024-11-16 04:00:06,581] [pool-1-thread-6] Initializing /data/converted/markus/6ch-Z-stack_deconvolved.tif:
[testng] [2024-11-16 04:04:50,123] [pool-1-thread-3] Initializing /data/converted/david/snap-181518-0001.tif:
[testng] [2024-11-16 04:04:51,674] [pool-1-thread-2] Initializing /data/converted/kelsey/1300x1030BW.tif:
[testng] [2024-11-16 04:05:12,280] [pool-1-thread-2] Initializing /data/converted/markus/PhaseGFP-MosaiX-Timelapse_Tiles.tif:
[testng] [2024-11-16 04:05:17,154] [pool-1-thread-3] Initializing /data/converted/jonas/10_0907_multidrug-0001_AB01_03.tif:
[testng] [2024-11-16 04:05:36,491] [pool-1-thread-9] Initializing /data/converted/stephan/notok2.tif:
[testng] 04:44:14,051 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
[testng] 04:44:14,051 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 04:44:14,052 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-11-16_04-44-14.log]
[testng] 04:44:14,052 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2d0ea3a9 - End of configuration.
[testng]
[testng] ===============================================
[testng] Bio-Formats software test suite
[testng] Total tests run: 6625, Failures: 0, Skips: 0
[testng] ===============================================
[testng]
BUILD SUCCESSFUL
Total time: 93 minutes 2 seconds
Finished: SUCCESS