Started by upstream project "BIOFORMATS-test-repo" build number 263
originally caused by:
 Started by user devspace
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder
[BIOFORMATS-test-folder] $ /bin/bash -xe /tmp/jenkins11847572401418217614.sh
+ '[' fluoview = slidebook ']'
++ date +%u
+ '[' 4 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_41547_merge_ci -v /uod/idr/repos/curated/fluoview:/data -v /uod/idr-scratch/merge-ci/curated/fluoview:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
     [echo] isSnapshot = true

init-title:
     [echo] ----------=========== bio-formats-testing-framework ===========----------

init-timestamp:

init:

copy-resources:

compile:
[resolver:resolve] Resolving artifacts

compile-tests:
[resolver:resolve] Resolving artifacts
    [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
    [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
    [javac] warning: [options] source value 8 is obsolete and will be removed in a future release
    [javac] warning: [options] target value 8 is obsolete and will be removed in a future release
    [javac] warning: [options] To suppress warnings about obsolete options, use -Xlint:-options.
    [javac] 4 warnings

test-automated:
   [testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket
   [testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket
   [testng] File leak detector installed
   [testng] 18:16:47,177 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
   [testng] 18:16:47,178 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - No custom configurators were discovered as a service.
   [testng] 18:16:47,178 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 18:16:47,179 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 18:16:47,179 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
   [testng] 18:16:47,179 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
   [testng] 18:16:47,180 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
   [testng] 18:16:47,180 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 18:16:47,180 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 18:16:47,181 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
   [testng] 18:16:47,181 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
   [testng] 18:16:47,181 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
   [testng] 18:16:47,334 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
   [testng] 18:16:47,334 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
   [testng] 18:16:47,357 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
   [testng] 18:16:47,358 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
   [testng] 18:16:47,364 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
   [testng] 18:16:47,364 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
   [testng] 18:16:47,364 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
   [testng] 18:16:47,364 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
   [testng] 18:16:47,364 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@29215f06 - End of configuration.
   [testng] 18:16:47,365 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@b9b00e0 - Registering current configuration as safe fallback point
   [testng] 18:16:47,365 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 185 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
   [testng] [2024-11-21 18:16:47,374] [main] java.version = 21
   [testng] 18:16:47,377 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
   [testng] 18:16:47,377 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 18:16:47,416 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-11-21_18-16-47.log]
   [testng] 18:16:47,418 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1b919693 - End of configuration.
   [testng] [2024-11-21 18:16:47,419] [main] testng.directory = /data
   [testng] [2024-11-21 18:16:47,419] [main] testng.configDirectory = /config
   [testng] [2024-11-21 18:16:47,428] [main] testng.multiplier = 1.0
   [testng] [2024-11-21 18:16:47,428] [main] testng.in-memory = false
   [testng] [2024-11-21 18:16:47,428] [main] testng.allow-missing = false
   [testng] [2024-11-21 18:16:47,428] [main] user.language = en
   [testng] [2024-11-21 18:16:47,429] [main] user.country = ${user.country}
   [testng] [2024-11-21 18:16:47,429] [main] Maximum heap size = 15360 MB
   [testng] Scanning for files...
   [testng] [2024-11-21 18:16:50,695] [main] ----------------------------------------
   [testng] [2024-11-21 18:16:50,695] [main] Total files: 14
   [testng] [2024-11-21 18:16:50,695] [main] Scan time: 3.266 s (233 ms/file)
   [testng] [2024-11-21 18:16:50,696] [main] ----------------------------------------
   [testng] Building list of tests...
   [testng] Ready to test 13 files
   [testng] [TestNG] Running:
   [testng]   Bio-Formats software test suite
   [testng] 
   [testng] [2024-11-21 18:17:13,132] [pool-1-thread-1] Initializing /data/timg/LiveOne.tif: 
   [testng] 18:17:13,133 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
   [testng] 18:17:13,133 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 18:17:13,134 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-11-21_18-17-13.log]
   [testng] 18:17:13,135 |-INFO in ch.qos.logback.core.sift.SiftProcessor@645d66db - End of configuration.
   [testng] [2024-11-21 18:17:14,066] [pool-1-thread-12] Initializing /data/timg/eric-three.tif: 
   [testng] 18:17:14,066 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
   [testng] 18:17:14,066 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 18:17:14,067 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-11-21_18-17-14.log]
   [testng] 18:17:14,068 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4a237670 - End of configuration.
   [testng] [2024-11-21 18:17:15,020] [pool-1-thread-11] Initializing /data/timg/eric-one.tif: 
   [testng] 18:17:15,020 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
   [testng] 18:17:15,020 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 18:17:15,021 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-11-21_18-17-15.log]
   [testng] 18:17:15,021 |-INFO in ch.qos.logback.core.sift.SiftProcessor@41a3a0af - End of configuration.
   [testng] [2024-11-21 18:17:16,300] [pool-1-thread-10] Initializing /data/timg/LiveThree-xyzt.tif: 
   [testng] 18:17:16,300 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
   [testng] 18:17:16,300 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 18:17:16,301 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-11-21_18-17-16.log]
   [testng] 18:17:16,301 |-INFO in ch.qos.logback.core.sift.SiftProcessor@c9025a9 - End of configuration.
   [testng] [2024-11-21 18:17:17,523] [pool-1-thread-9] Initializing /data/timg/eric-three-projection.tif: 
   [testng] 18:17:17,523 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
   [testng] 18:17:17,523 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 18:17:17,524 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-11-21_18-17-17.log]
   [testng] 18:17:17,524 |-INFO in ch.qos.logback.core.sift.SiftProcessor@310bc2d5 - End of configuration.
   [testng] [2024-11-21 18:17:18,622] [pool-1-thread-8] Initializing /data/timg/E1-v2(11 som).tif: 
   [testng] 18:17:18,623 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
   [testng] 18:17:18,623 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 18:17:18,624 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-11-21_18-17-18.log]
   [testng] 18:17:18,624 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1b378a33 - End of configuration.
   [testng] [2024-11-21 18:17:19,785] [pool-1-thread-7] Initializing /data/timg/eric-one-3d.tif: 
   [testng] 18:17:19,785 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
   [testng] 18:17:19,785 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 18:17:19,785 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-11-21_18-17-19.log]
   [testng] 18:17:19,786 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7c0e763 - End of configuration.
   [testng] [2024-11-21 18:17:20,891] [pool-1-thread-6] Initializing /data/timg/LiveTwo.tif: 
   [testng] 18:17:20,891 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
   [testng] 18:17:20,891 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 18:17:20,892 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-11-21_18-17-20.log]
   [testng] 18:17:20,892 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3bb7b6c5 - End of configuration.
   [testng] [2024-11-21 18:17:22,114] [pool-1-thread-5] Initializing /data/aaron/olympus_fv500.tif: 
   [testng] 18:17:22,114 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
   [testng] 18:17:22,114 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 18:17:22,115 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-11-21_18-17-22.log]
   [testng] 18:17:22,115 |-INFO in ch.qos.logback.core.sift.SiftProcessor@13a85bd5 - End of configuration.
   [testng] [2024-11-21 18:17:23,263] [pool-1-thread-4] Initializing /data/jae/BrdU.1c-1.z.Live1-25-2005_11-58-40_AM.tif: 
   [testng] 18:17:23,264 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
   [testng] 18:17:23,264 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 18:17:23,264 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-11-21_18-17-23.log]
   [testng] 18:17:23,265 |-INFO in ch.qos.logback.core.sift.SiftProcessor@80175f3 - End of configuration.
   [testng] [2024-11-21 18:17:24,493] [pool-1-thread-3] Initializing /data/brian/DBTRG 2X 1a-1.tif: 
   [testng] 18:17:24,493 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
   [testng] 18:17:24,493 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 18:17:24,494 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-11-21_18-17-24.log]
   [testng] 18:17:24,494 |-INFO in ch.qos.logback.core.sift.SiftProcessor@79d2f36a - End of configuration.
   [testng] [2024-11-21 18:17:25,789] [pool-1-thread-2] Initializing /data/shalin/40xNA0.6-512x512.tif: 
   [testng] 18:17:25,789 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
   [testng] 18:17:25,789 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 18:17:25,790 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-11-21_18-17-25.log]
   [testng] 18:17:25,790 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1f553e27 - End of configuration.
   [testng] [2024-11-21 18:17:37,128] [pool-1-thread-1] Initializing /data/brian/DBTRG 2X 1a-1_DSP.TIF: 
   [testng] 
   [testng] ===============================================
   [testng] Bio-Formats software test suite
   [testng] Total tests run: 689, Failures: 0, Skips: 0
   [testng] ===============================================
   [testng] 

BUILD SUCCESSFUL
Total time: 1 minute 3 seconds
Finished: SUCCESS