Started by upstream project "BIOFORMATS-test-repo" build number 267 originally caused by: Started by upstream project "Trigger" build number 290 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@8 [BIOFORMATS-test-folder@8] $ /bin/bash -xe /tmp/jenkins11966020373373377947.sh + '[' tiff = slidebook ']' ++ date +%u + '[' 1 -le 1 ']' + DOCKER_ARGS='-Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR' + sudo docker run --rm --name BIOFORMATS-test-folder_42116_merge_ci -v /uod/idr/repos/curated/tiff:/data -v /uod/idr-scratch/merge-ci/curated/tiff:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test test-automated: [testng] File leak detector installed [testng] 00:23:02,348 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 00:23:02,349 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - No custom configurators were discovered as a service. [testng] 00:23:02,349 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 00:23:02,350 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 00:23:02,350 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 00:23:02,351 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 00:23:02,351 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 00:23:02,351 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 00:23:02,351 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 00:23:02,352 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 00:23:02,352 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 00:23:02,352 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 00:23:02,580 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 00:23:02,580 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 00:23:02,609 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 00:23:02,609 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 00:23:02,617 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 00:23:02,617 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 00:23:02,617 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 00:23:02,617 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 00:23:02,618 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@7a69b07 - End of configuration. [testng] 00:23:02,618 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@636be97c - Registering current configuration as safe fallback point [testng] 00:23:02,618 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 267 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-11-25 00:23:02,628] [main] java.version = 1.8.0_342 [testng] 00:23:02,632 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 00:23:02,632 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:23:02,676 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-11-25_00-23-02.log] [testng] 00:23:02,678 |-INFO in ch.qos.logback.core.sift.SiftProcessor@13c9d689 - End of configuration. [testng] [2024-11-25 00:23:02,680] [main] testng.directory = /data [testng] [2024-11-25 00:23:02,680] [main] testng.configDirectory = /config [testng] [2024-11-25 00:23:02,692] [main] testng.multiplier = 1.0 [testng] [2024-11-25 00:23:02,692] [main] testng.in-memory = false [testng] [2024-11-25 00:23:02,692] [main] testng.allow-missing = false [testng] [2024-11-25 00:23:02,692] [main] user.language = fr [testng] [2024-11-25 00:23:02,692] [main] user.country = FR [testng] [2024-11-25 00:23:02,692] [main] Maximum heap size = 13653 MB [testng] Scanning for files... [testng] [2024-11-25 00:23:37,307] [main] ---------------------------------------- [testng] [2024-11-25 00:23:37,307] [main] Total files: 4426 [testng] [2024-11-25 00:23:37,308] [main] Scan time: 34.615 s (7 ms/file) [testng] [2024-11-25 00:23:37,308] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 722 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-11-25 00:45:15,502] [pool-1-thread-1] Initializing /data/lzw/Cortico-Striatal.tif: [testng] 00:45:15,502 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 00:45:15,502 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:45:15,503 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-11-25_00-45-15.log] [testng] 00:45:15,504 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7e186e96 - End of configuration. [testng] [2024-11-25 00:45:16,361] [pool-1-thread-12] Initializing /data/damian/24m.tiff: [testng] 00:45:16,361 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 00:45:16,361 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:45:16,362 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-11-25_00-45-16.log] [testng] 00:45:16,363 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4d34cfde - End of configuration. [testng] [2024-11-25 00:45:16,968] [pool-1-thread-11] Initializing /data/brian/PlantCell/PlantCell_C0_Z006.tif: [testng] 00:45:16,969 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 00:45:16,969 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:45:16,969 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-11-25_00-45-16.log] [testng] 00:45:16,970 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5d8993a - End of configuration. [testng] [2024-11-25 00:45:17,982] [pool-1-thread-10] Initializing /data/samples/cielab/Ski_TC8-03_abs.tif: [testng] 00:45:17,983 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 00:45:17,983 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:45:17,988 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-11-25_00-45-17.log] [testng] 00:45:17,989 |-INFO in ch.qos.logback.core.sift.SiftProcessor@261765b3 - End of configuration. [testng] [2024-11-25 00:45:18,762] [pool-1-thread-9] Initializing /data/brian/PlantCell/PlantCell_C0_Z008.tif: [testng] 00:45:18,762 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 00:45:18,762 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:45:18,762 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-11-25_00-45-18.log] [testng] 00:45:18,763 |-INFO in ch.qos.logback.core.sift.SiftProcessor@41cb9b5d - End of configuration. [testng] [2024-11-25 00:45:19,797] [pool-1-thread-8] Initializing /data/public/libtiff/jim___dg.tif: [testng] 00:45:19,797 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 00:45:19,797 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:45:19,798 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-11-25_00-45-19.log] [testng] 00:45:19,798 |-INFO in ch.qos.logback.core.sift.SiftProcessor@9731f3e - End of configuration. [testng] [2024-11-25 00:45:20,824] [pool-1-thread-7] Initializing /data/brian/retina/retina_C0_Z047.tif: [testng] 00:45:20,825 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 00:45:20,825 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:45:20,825 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-11-25_00-45-20.log] [testng] 00:45:20,825 |-INFO in ch.qos.logback.core.sift.SiftProcessor@15e91d2a - End of configuration. [testng] [2024-11-25 00:45:21,834] [pool-1-thread-6] Initializing /data/brian/PlantCell/PlantCell_C1_Z036.tif: [testng] 00:45:21,834 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 00:45:21,834 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:45:21,835 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-11-25_00-45-21.log] [testng] 00:45:21,835 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7bcb069 - End of configuration. [testng] [2024-11-25 00:45:22,546] [pool-1-thread-5] Initializing /data/josiah/cell-Z27.C1.tiff: [testng] 00:45:22,546 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 00:45:22,546 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:45:22,547 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-11-25_00-45-22.log] [testng] 00:45:22,547 |-INFO in ch.qos.logback.core.sift.SiftProcessor@23482a51 - End of configuration. [testng] [2024-11-25 00:45:23,444] [pool-1-thread-4] Initializing /data/brian/retina/retina_C0_Z015.tif: [testng] 00:45:23,445 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 00:45:23,446 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:45:23,448 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-11-25_00-45-23.log] [testng] 00:45:23,451 |-INFO in ch.qos.logback.core.sift.SiftProcessor@89e906e - End of configuration. [testng] [2024-11-25 00:45:24,394] [pool-1-thread-3] Initializing /data/brian/retina/retina_C0_Z060.tif: [testng] 00:45:24,394 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 00:45:24,395 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:45:24,395 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-11-25_00-45-24.log] [testng] 00:45:24,396 |-INFO in ch.qos.logback.core.sift.SiftProcessor@46deb59f - End of configuration. [testng] [2024-11-25 00:45:25,208] [pool-1-thread-2] Initializing /data/samples/melissa/imagej-4gb/4gb-test&sizeX=1024&sizeY=1024&pixelType=uint16&sizeC=2050.fake: [testng] 00:45:25,208 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 00:45:25,208 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:45:25,209 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-11-25_00-45-25.log] [testng] 00:45:25,209 |-INFO in ch.qos.logback.core.sift.SiftProcessor@23c7877 - End of configuration. [testng] [2024-11-25 00:45:34,147] [pool-1-thread-2] Initializing /data/josiah/cell-Z21.C0.tiff: [testng] [2024-11-25 00:45:36,697] [pool-1-thread-7] Initializing /data/brian/retina/retina_C0_Z005.tif: [testng] [2024-11-25 00:45:37,754] [pool-1-thread-3] Initializing /data/brian/PlantCell/PlantCell_C0_Z004.tif: [testng] [2024-11-25 00:45:38,465] [pool-1-thread-6] Initializing /data/brian/MFGTMP_080902150001t001B02f73d1.TIF: [testng] [2024-11-25 00:45:39,163] [pool-1-thread-4] Initializing /data/josiah/cell-Z10.C1.tiff: [testng] [2024-11-25 00:45:39,992] [pool-1-thread-8] Initializing /data/brian/retina/retina_C1_Z038.tif: [testng] [2024-11-25 00:45:40,972] [pool-1-thread-9] Initializing /data/josh/NESb_C2_TP4.tiff: [testng] [2024-11-25 00:45:41,879] [pool-1-thread-11] Initializing /data/josiah/cell-Z7.C0.tiff: [testng] [2024-11-25 00:45:42,658] [pool-1-thread-5] Initializing /data/damian/12m.tiff: [testng] [2024-11-25 00:45:43,176] [pool-1-thread-12] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-strips-02.tiff: [testng] [2024-11-25 00:45:43,687] [pool-1-thread-10] Initializing /data/andrew/wibble-tmp4.tiff: [testng] [2024-11-25 00:45:44,180] [pool-1-thread-1] Initializing /data/misc/mri-old.mov: [testng] [2024-11-25 00:45:47,055] [pool-1-thread-1] Initializing /data/brian/retina/retina_C1_Z007.tif: [testng] [2024-11-25 00:45:50,572] [pool-1-thread-2] Initializing /data/stephane/Copy of listeria + clathrin1_w3Cy5.tif: [testng] [2024-11-25 00:45:51,881] [pool-1-thread-11] Initializing /data/jonathan/XSEC-02.TIF: [testng] [2024-11-25 00:45:53,313] [pool-1-thread-4] Initializing /data/samples/cielab/Ski_TC8-03_sRGB_lab.tif: [testng] [2024-11-25 00:45:54,241] [pool-1-thread-9] Initializing /data/josiah/cell-Z34.C1.tiff: [testng] [2024-11-25 00:45:55,387] [pool-1-thread-3] Initializing /data/brian/PlantCell/PlantCell_C1_Z021.tif: [testng] [2024-11-25 00:45:56,111] [pool-1-thread-5] Initializing /data/brian/retina/retina_C0_Z000.tif: [testng] [2024-11-25 00:45:56,872] [pool-1-thread-12] Initializing /data/brian/PlantCell/PlantCell_C0_Z020.tif: [testng] [2024-11-25 00:45:58,000] [pool-1-thread-10] Initializing /data/brian/retina/retina_C0_Z045.tif: [testng] [2024-11-25 00:45:58,899] [pool-1-thread-6] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-tiles-64x64.tiff: [testng] [2024-11-25 00:45:59,714] [pool-1-thread-7] Initializing /data/josh/jnb1s1_raw0243.TIF: [testng] [2024-11-25 00:46:00,498] [pool-1-thread-8] Initializing /data/ascb/14346-myc-p125A.tif: [testng] [2024-11-25 00:46:03,765] [pool-1-thread-1] Initializing /data/brian/PlantCell/PlantCell_C0_Z019.tif: [testng] [2024-11-25 00:46:08,245] [pool-1-thread-11] Initializing /data/josh/ZProjection of stack.tif: [testng] [2024-11-25 00:46:09,487] [pool-1-thread-2] Initializing /data/public/condensation/A5.pattern3.tif: [testng] [2024-11-25 00:46:13,500] [pool-1-thread-6] Initializing /data/josh/NESb_C2_TP10.tiff: [testng] [2024-11-25 00:46:14,609] [pool-1-thread-8] Initializing /data/brian/retina/retina_C1_Z008.tif: [testng] [2024-11-25 00:46:15,802] [pool-1-thread-10] Initializing /data/wayne/m51-16bit.tif: [testng] [2024-11-25 00:46:16,643] [pool-1-thread-3] Initializing /data/josiah/cell-Z5.C1.tiff: [testng] [2024-11-25 00:46:18,664] [pool-1-thread-9] Initializing /data/public/libtiff/jim___ah.tif: [testng] [2024-11-25 00:46:20,184] [pool-1-thread-12] Initializing /data/brian/PlantCell/PlantCell_C0_Z011.tif: [testng] [2024-11-25 00:46:21,405] [pool-1-thread-5] Initializing /data/josh/jnb1s1_raw0252.TIF: [testng] [2024-11-25 00:46:23,093] [pool-1-thread-7] Initializing /data/josiah/cell-Z31.C0.tiff: [testng] [2024-11-25 00:46:24,420] [pool-1-thread-1] Initializing /data/wayne/Rockies-grayscale.tif: [testng] [2024-11-25 00:46:31,374] [pool-1-thread-2] Initializing /data/brian/retina/retina_C1_Z052.tif: [testng] [2024-11-25 00:46:32,711] [pool-1-thread-11] Initializing /data/josiah/cell-Z29.C0.tiff: [testng] [2024-11-25 00:46:34,270] [pool-1-thread-4] Initializing /data/brian/retina/retina_C1_Z021.tif: [testng] [2024-11-25 00:46:35,839] [pool-1-thread-3] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-tiles-48x32.tiff: [testng] [2024-11-25 00:46:36,700] [pool-1-thread-7] Initializing /data/ascb/CYT-31_FriendOsmium_4800.tif: [testng] [2024-11-25 00:46:37,519] [pool-1-thread-10] Initializing /data/wayne/Rockies-48bit-rgb.tif: [testng] [2024-11-25 00:46:38,251] [pool-1-thread-6] Initializing /data/samples/melissa/imagej-4gb/4gb-imagej.tif: [testng] [2024-11-25 00:46:39,046] [pool-1-thread-8] Initializing /data/brian/retina/retina_C0_Z026.tif: [testng] [2024-11-25 00:46:39,771] [pool-1-thread-5] Initializing /data/brian/PlantCell/PlantCell_C1_Z018.tif: [testng] [2024-11-25 00:46:40,536] [pool-1-thread-9] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs013.TIF: [testng] [2024-11-25 00:46:41,276] 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01:04:49,129] [pool-1-thread-10] Initializing /data/public/condensation/A6.pattern1.tif: [testng] [2024-11-25 01:04:49,946] [pool-1-thread-2] Initializing /data/samples/melissa/imagej-last-ifd/Rat_Hippocampal_Neuron.tif: [testng] [2024-11-25 01:04:58,408] [pool-1-thread-8] Initializing /data/brian/retina/retina_C0_Z009.tif: [testng] [2024-11-25 01:05:01,624] [pool-1-thread-1] Initializing /data/public/condensation/E4.pattern9.tif: [testng] [2024-11-25 01:05:02,550] [pool-1-thread-2] Initializing /data/josiah/cell-Z19.C0.tiff: [testng] [2024-11-25 01:05:03,690] [pool-1-thread-6] Initializing /data/brian/retina/retina_C1_Z005.tif: [testng] [2024-11-25 01:05:04,838] [pool-1-thread-3] Initializing /data/bene/3d-example-stack.tif: [testng] [2024-11-25 01:05:05,873] [pool-1-thread-10] Initializing /data/ascb/bad/FND-18_FawcettGolgi_4800.tif: [testng] [2024-11-25 01:05:06,761] [pool-1-thread-4] Initializing /data/ascb/CYT-146_Fader_Distribution.tif: [testng] [2024-11-25 01:05:07,675] 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01:06:29,686] [pool-1-thread-6] Initializing /data/public/libtiff/dscf0013.tif: [testng] [2024-11-25 01:06:30,664] [pool-1-thread-2] Initializing /data/carolyn/tumor_1.tif: [testng] [2024-11-25 01:06:31,539] [pool-1-thread-10] Initializing /data/ascb/CYT-92_PasolliMouse1b_4800.tif: [testng] [2024-11-25 01:06:32,265] [pool-1-thread-3] Initializing /data/julien/RobertOrti.TIF: [testng] [2024-11-25 01:06:33,409] [pool-1-thread-7] Initializing /data/josiah/cell-Z9.C0.tiff: [testng] [2024-11-25 01:06:34,139] [pool-1-thread-4] Initializing /data/josiah/cell-Z33.C1.tiff: [testng] [2024-11-25 01:06:35,099] [pool-1-thread-11] Initializing /data/carolyn/tumor_2.tif: [testng] [2024-11-25 01:06:42,848] [pool-1-thread-12] Initializing /data/josh/jnb1s1_raw0233.TIF: [testng] [2024-11-25 01:06:45,892] [pool-1-thread-11] Initializing /data/lzw/Cholinergic.tif: [testng] [2024-11-25 01:06:46,666] [pool-1-thread-3] Initializing /data/martin/head.tif: [testng] [2024-11-25 01:06:47,565] [pool-1-thread-4] Initializing /data/josiah/cell-Z24.C0.tiff: [testng] [2024-11-25 01:06:48,348] [pool-1-thread-5] Initializing /data/brian/PlantCell/PlantCell_C0_Z024.tif: [testng] [2024-11-25 01:06:49,065] [pool-1-thread-7] Initializing /data/glen/742015a20x3middle16bit.tif: [testng] [2024-11-25 01:06:49,807] [pool-1-thread-1] Initializing /data/josiah/cell-Z17.C0.tiff: [testng] [2024-11-25 01:06:50,561] [pool-1-thread-2] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-strips-05.tiff: [testng] [2024-11-25 01:06:51,625] [pool-1-thread-6] Initializing /data/brian/retina/retina_C1_Z035.tif: [testng] [2024-11-25 01:06:54,700] [pool-1-thread-8] Initializing /data/brian/retina/retina_C0_Z019.tif: [testng] [2024-11-25 01:06:56,205] [pool-1-thread-10] Initializing /data/brian/retina/retina_C1_Z058.tif: [testng] [2024-11-25 01:07:03,098] [pool-1-thread-12] Initializing /data/ascb/FND-12_PorterFranziniSarcoplasmic_4800.tif: [testng] [2024-11-25 01:07:07,846] [pool-1-thread-1] Initializing 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Initializing /data/alla/deconvolve6/deconvolve6_Pseudo.tif: [testng] [2024-11-25 01:07:17,033] [pool-1-thread-10] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-tiles-16x16.tiff: [testng] [2024-11-25 01:07:27,123] [pool-1-thread-10] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs011.TIF: [testng] [2024-11-25 01:07:27,950] [pool-1-thread-7] Initializing /data/alexa/test4.tif: [testng] [2024-11-25 01:07:28,912] [pool-1-thread-2] Initializing /data/qa-17411/_t20270.tif: [testng] [2024-11-25 01:07:29,546] [pool-1-thread-6] Initializing /data/curtis/itk/MG63_0_1.tif: [testng] [2024-11-25 01:07:30,070] [pool-1-thread-12] Initializing /data/brian/retina/retina_C1_Z061.tif: [testng] [2024-11-25 01:07:30,663] [pool-1-thread-8] Initializing /data/big-images/4kx4k.tif: [testng] [2024-11-25 01:07:31,299] [pool-1-thread-3] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs006.TIF: [testng] [2024-11-25 01:07:32,053] [pool-1-thread-4] Initializing 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[testng] [2024-11-25 01:08:17,373] [pool-1-thread-7] Initializing /data/brian/retina/retina_C0_Z049.tif: [testng] [2024-11-25 01:08:18,706] [pool-1-thread-11] Initializing /data/public/condensation/A10.pattern5.tif: [testng] [2024-11-25 01:08:20,058] [pool-1-thread-4] Initializing /data/misc/before 1_C2_TP1.tiff: [testng] [2024-11-25 01:08:21,768] [pool-1-thread-6] Initializing /data/jacques/20110629-Spat-1_1.tif: [testng] [2024-11-25 01:08:24,654] [pool-1-thread-8] Initializing /data/ascb/bad/CYT-76_PasolliMouse1_4800.tif: [testng] [2024-11-25 01:08:30,787] [pool-1-thread-5] Initializing /data/brian/retina/retina_C1_Z009.tif: [testng] [2024-11-25 01:08:32,820] [pool-1-thread-9] Initializing /data/josh/NESb_C2_TP6.tiff: [testng] [2024-11-25 01:08:39,995] [pool-1-thread-1] Initializing /data/public/cellprofiler/fruit-fly-cells/POS076.pattern/POS076.pattern: [testng] [2024-11-25 01:08:45,939] [pool-1-thread-10] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs009.TIF: [testng] [2024-11-25 01:08:47,446] [pool-1-thread-2] Initializing /data/sub-resolution/Leica-3/Leica-3-subifds.tiff: [testng] [2024-11-25 01:08:48,851] [pool-1-thread-7] Initializing /data/brian/PlantCell/PlantCell_C0_Z007.tif: [testng] [2024-11-25 01:08:50,216] [pool-1-thread-11] Initializing /data/brian/retina/retina_C0_Z025.tif: [testng] [2024-11-25 01:08:51,468] [pool-1-thread-4] Initializing /data/damian/33m.tiff: [testng] [2024-11-25 01:08:52,791] [pool-1-thread-3] Initializing /data/josh/jnb1s1_raw0226.TIF: [testng] [2024-11-25 01:08:54,310] [pool-1-thread-5] Initializing /data/imagesc-82872/SG11410002_253174651388_S001.tif: [testng] [2024-11-25 01:09:01,304] [pool-1-thread-9] Initializing /data/josiah/cell-Z24.C1.tiff: [testng] [2024-11-25 01:09:06,443] [pool-1-thread-6] Initializing /data/josh/jnb1s1_raw0256.TIF: [testng] [2024-11-25 01:09:08,963] [pool-1-thread-7] Initializing /data/brian/PlantCell/PlantCell_C0_Z037.tif: [testng] [2024-11-25 01:09:10,306] [pool-1-thread-11] Initializing /data/josh/jnb1s1_raw0241.TIF: [testng] [2024-11-25 01:09:11,484] [pool-1-thread-4] Initializing /data/misc/mri.avi: [testng] [2024-11-25 01:09:11,701] [pool-1-thread-12] Initializing /data/samples/melissa/long8-subfiletype/Cell_Colony.tif: [testng] [2024-11-25 01:09:12,799] [pool-1-thread-8] Initializing /data/jae/Second image.tif: [testng] [2024-11-25 01:09:13,765] [pool-1-thread-3] Initializing /data/josh/NESb_C2_TP2.tiff: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 38266, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 47 minutes 3 seconds Finished: SUCCESS