Started by upstream project "BIOFORMATS-test-repo" build number 267
originally caused by:
Started by upstream project "Trigger" build number 290
originally caused by:
Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@9
[BIOFORMATS-test-folder@9] $ /bin/bash -xe /tmp/jenkins1724045944020976682.sh
+ '[' fv1000 = slidebook ']'
++ date +%u
+ '[' 1 -le 1 ']'
+ DOCKER_ARGS='-Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR'
+ sudo docker run --rm --name BIOFORMATS-test-folder_42146_merge_ci -v /uod/idr/repos/curated/fv1000:/data -v /uod/idr-scratch/merge-ci/curated/fv1000:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
[echo] isSnapshot = true
init-title:
[echo] ----------=========== bio-formats-testing-framework ===========----------
init-timestamp:
init:
copy-resources:
compile:
[resolver:resolve] Resolving artifacts
compile-tests:
[resolver:resolve] Resolving artifacts
[javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
test-automated:
[testng] File leak detector installed
[testng] 00:55:11,864 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
[testng] 00:55:11,866 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - No custom configurators were discovered as a service.
[testng] 00:55:11,866 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 00:55:11,868 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 00:55:11,868 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
[testng] 00:55:11,868 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
[testng] 00:55:11,869 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 0 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
[testng] 00:55:11,869 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 00:55:11,869 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 00:55:11,870 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
[testng] 00:55:11,870 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
[testng] 00:55:11,870 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
[testng] 00:55:12,135 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
[testng] 00:55:12,135 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
[testng] 00:55:12,172 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
[testng] 00:55:12,173 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
[testng] 00:55:12,181 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
[testng] 00:55:12,181 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
[testng] 00:55:12,181 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
[testng] 00:55:12,182 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
[testng] 00:55:12,182 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@7a69b07 - End of configuration.
[testng] 00:55:12,183 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@636be97c - Registering current configuration as safe fallback point
[testng] 00:55:12,183 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 314 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
[testng] [2024-11-25 00:55:12,193] [main] java.version = 1.8.0_342
[testng] 00:55:12,196 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
[testng] 00:55:12,197 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:55:12,245 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-11-25_00-55-12.log]
[testng] 00:55:12,248 |-INFO in ch.qos.logback.core.sift.SiftProcessor@13c9d689 - End of configuration.
[testng] [2024-11-25 00:55:12,251] [main] testng.directory = /data
[testng] [2024-11-25 00:55:12,251] [main] testng.configDirectory = /config
[testng] [2024-11-25 00:55:12,264] [main] testng.multiplier = 1.0
[testng] [2024-11-25 00:55:12,264] [main] testng.in-memory = false
[testng] [2024-11-25 00:55:12,264] [main] testng.allow-missing = false
[testng] [2024-11-25 00:55:12,264] [main] user.language = fr
[testng] [2024-11-25 00:55:12,264] [main] user.country = FR
[testng] [2024-11-25 00:55:12,264] [main] Maximum heap size = 13653 MB
[testng] Scanning for files...
[testng] [2024-11-25 00:56:05,418] [main] ----------------------------------------
[testng] [2024-11-25 00:56:05,418] [main] Total files: 259
[testng] [2024-11-25 00:56:05,418] [main] Scan time: 53.154 s (205 ms/file)
[testng] [2024-11-25 00:56:05,419] [main] ----------------------------------------
[testng] Building list of tests...
[testng] Ready to test 144 files
[testng] [TestNG] Running:
[testng] Bio-Formats software test suite
[testng]
[testng] [2024-11-25 01:07:30,107] [pool-1-thread-1] Initializing /data/kashif/OIF_V1/Sample_XYZ.oif:
[testng] 01:07:30,108 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
[testng] 01:07:30,108 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:07:30,109 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-11-25_01-07-30.log]
[testng] 01:07:30,110 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5d66f42b - End of configuration.
[testng] [2024-11-25 01:07:31,069] [pool-1-thread-12] Initializing /data/shane/Data Subset/EX5-10 fresh plan.oib:
[testng] 01:07:31,069 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
[testng] 01:07:31,069 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:07:31,070 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-11-25_01-07-31.log]
[testng] 01:07:31,070 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7683d1d9 - End of configuration.
[testng] [2024-11-25 01:07:31,547] [pool-1-thread-11] Initializing /data/aryeh/naomi/Brain 2 he1d 1.oif:
[testng] 01:07:31,547 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
[testng] 01:07:31,547 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:07:31,548 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-11-25_01-07-31.log]
[testng] 01:07:31,548 |-INFO in ch.qos.logback.core.sift.SiftProcessor@46357753 - End of configuration.
[testng] [2024-11-25 01:07:35,240] [pool-1-thread-10] Initializing /data/aryeh/061010 plate 1/Image0002_06.oib:
[testng] 01:07:35,241 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
[testng] 01:07:35,241 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:07:35,242 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-11-25_01-07-35.log]
[testng] 01:07:35,242 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6f1bf22a - End of configuration.
[testng] [2024-11-25 01:07:36,326] [pool-1-thread-9] Initializing /data/pedro/plv-test.oib:
[testng] 01:07:36,326 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
[testng] 01:07:36,326 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:07:36,326 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-11-25_01-07-36.log]
[testng] 01:07:36,327 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3043b611 - End of configuration.
[testng] [2024-11-25 01:07:37,198] [pool-1-thread-8] Initializing /data/jcb/200909024/Sup Fig 2/2.oib:
[testng] 01:07:37,198 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
[testng] 01:07:37,198 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:07:37,199 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-11-25_01-07-37.log]
[testng] 01:07:37,200 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3bd21b97 - End of configuration.
[testng] [2024-11-25 01:07:38,044] [pool-1-thread-7] Initializing /data/molly/11OCT4.OIF:
[testng] 01:07:38,044 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
[testng] 01:07:38,044 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:07:38,045 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-11-25_01-07-38.log]
[testng] 01:07:38,045 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3edc23f9 - End of configuration.
[testng] [2024-11-25 01:07:50,876] [pool-1-thread-6] Initializing /data/brian/CagedATP CaG+FuraR3_a.oib:
[testng] 01:07:50,876 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
[testng] 01:07:50,876 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:07:50,880 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-11-25_01-07-50.log]
[testng] 01:07:50,880 |-INFO in ch.qos.logback.core.sift.SiftProcessor@c66a69b - End of configuration.
[testng] [2024-11-25 01:07:51,377] [pool-1-thread-5] Initializing /data/shane/Data Subset/NESTIN_control2.oif:
[testng] 01:07:51,377 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
[testng] 01:07:51,377 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:07:51,378 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-11-25_01-07-51.log]
[testng] 01:07:51,379 |-INFO in ch.qos.logback.core.sift.SiftProcessor@f36ae94 - End of configuration.
[testng] [2024-11-25 01:07:52,377] [pool-1-thread-4] Initializing /data/molly/11OCT5.OIF:
[testng] 01:07:52,377 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
[testng] 01:07:52,377 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:07:52,378 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-11-25_01-07-52.log]
[testng] 01:07:52,378 |-INFO in ch.qos.logback.core.sift.SiftProcessor@a75fb03 - End of configuration.
[testng] [2024-11-25 01:08:01,801] [pool-1-thread-3] Initializing /data/glen/Null file/test no change.oif:
[testng] 01:08:01,801 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
[testng] 01:08:01,801 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:08:01,802 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-11-25_01-08-01.log]
[testng] 01:08:01,803 |-INFO in ch.qos.logback.core.sift.SiftProcessor@16f1fbbf - End of configuration.
[testng] [2024-11-25 01:08:02,834] [pool-1-thread-2] Initializing /data/sten/01.oib:
[testng] 01:08:02,834 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
[testng] 01:08:02,835 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:08:02,835 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-11-25_01-08-02.log]
[testng] 01:08:02,835 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5bd0528d - End of configuration.
[testng] [2024-11-25 01:08:10,359] [pool-1-thread-12] Initializing /data/johannes/Image0006/Image0006.oif.files/Image0006_Thumb.bmp:
[testng] [2024-11-25 01:08:10,607] [pool-1-thread-8] Initializing /data/shane/Data Subset/MHC1_control.oif:
[testng] [2024-11-25 01:08:11,935] [pool-1-thread-9] Initializing /data/kashif/OIF_V2/Sample_XYZ.oif:
[testng] [2024-11-25 01:08:14,126] [pool-1-thread-2] Initializing /data/glen/seqlinestack.oif:
[testng] [2024-11-25 01:08:19,211] [pool-1-thread-6] Initializing /data/brian/CagedATP CaG7a.oib:
[testng] [2024-11-25 01:08:19,859] [pool-1-thread-10] Initializing /data/johannes/step5b.bmp:
[testng] [2024-11-25 01:08:21,465] [pool-1-thread-12] Initializing /data/michael/CELL3.oib:
[testng] [2024-11-25 01:08:22,974] [pool-1-thread-10] Initializing /data/brian/Lambda10nm.oib:
[testng] [2024-11-25 01:08:25,527] [pool-1-thread-6] Initializing /data/aryeh/061010 plate 1/Image0002_02.oib:
[testng] [2024-11-25 01:08:28,063] [pool-1-thread-12] Initializing /data/brian/PA-GFPv-2.oib:
[testng] [2024-11-25 01:08:30,575] [pool-1-thread-10] Initializing /data/molly/11OCT3.OIF:
[testng] [2024-11-25 01:09:29,291] [pool-1-thread-6] Initializing /data/glen/simulstack.oib:
[testng] [2024-11-25 01:09:30,110] [pool-1-thread-5] Initializing /data/molly/11OCT6.OIF:
[testng] [2024-11-25 01:09:42,357] [pool-1-thread-3] Initializing /data/shane/Data Subset/EXX4-10G40%.oib:
[testng] [2024-11-25 01:09:42,937] [pool-1-thread-12] Initializing /data/brian/Kaede-Neuron-9XYZ.oib:
[testng] [2024-11-25 01:09:46,133] [pool-1-thread-6] Initializing /data/glen/singleseqline.oib:
[testng] [2024-11-25 01:09:47,627] [pool-1-thread-8] Initializing /data/aryeh/PIP2 ESCV Z 1 after.oib:
[testng] [2024-11-25 01:09:48,655] [pool-1-thread-3] Initializing /data/monica/Image0056.oif:
[testng] [2024-11-25 01:09:49,371] [pool-1-thread-12] Initializing /data/barbara/Image_with_working_import.oib:
[testng] [2024-11-25 01:09:51,827] [pool-1-thread-6] Initializing /data/francesco/fGfp.c15.oib:
[testng] [2024-11-25 01:09:53,669] [pool-1-thread-12] Initializing /data/daniel/M1(0 0 146)-r1-drift8_3-6-3s_4Hz_0.006cpp_fillfact-0.25-0.488mspl-3x.oib:
[testng] [2024-11-25 01:09:59,611] [pool-1-thread-8] Initializing /data/brian/PA-GFP-3.oib:
[testng] [2024-11-25 01:10:00,337] [pool-1-thread-6] Initializing /data/aryeh/061010 plate 1/Image0002_05.oib:
[testng] [2024-11-25 01:10:06,082] [pool-1-thread-8] Initializing /data/glen/111407.oif:
[testng] [2024-11-25 01:10:08,762] [pool-1-thread-6] Initializing /data/glen/ticket-10092/tbn 02-10-12 D7 DT 8300 1.oif:
[testng] [2024-11-25 01:10:27,145] [pool-1-thread-12] Initializing /data/glen/singleseqframe.oif:
[testng] [2024-11-25 01:10:34,855] [pool-1-thread-3] Initializing /data/glen/notsaturated.oif:
[testng] [2024-11-25 01:11:17,087] [pool-1-thread-12] Initializing /data/dan/outerEV1solu6new.oib:
[testng] [2024-11-25 01:11:23,102] [pool-1-thread-12] Initializing /data/brian/CFP-GFP2.oib:
[testng] [2024-11-25 01:11:28,038] [pool-1-thread-12] Initializing /data/shane/Data Subset/EXX7-10G30% .oib:
[testng] [2024-11-25 01:11:34,583] [pool-1-thread-12] Initializing /data/glen/Image0002.oif:
[testng] [2024-11-25 01:16:09,218] [pool-1-thread-9] Initializing /data/glen/singleseqframe.oib:
[testng] [2024-11-25 01:16:12,930] [pool-1-thread-9] Initializing /data/jcb/200909024/Sup Fig 2/4.oib:
[testng] [2024-11-25 01:16:18,228] [pool-1-thread-9] Initializing /data/johannes/Image0016/Image0016.oif:
[testng] [2024-11-25 01:18:45,553] [pool-1-thread-1] Initializing /data/brian/CagedATP CaG7.oib:
[testng] [2024-11-25 01:18:57,558] [pool-1-thread-1] Initializing /data/marc/V0606J.oib:
[testng] [2024-11-25 01:19:20,120] [pool-1-thread-1] Initializing /data/glen/LUT issue/Greenredfarred.oif:
[testng] [2024-11-25 01:20:12,557] [pool-1-thread-3] Initializing /data/johannes/Image0010/Image0010.oif.files/Image0010_Thumb.bmp:
[testng] [2024-11-25 01:20:16,550] [pool-1-thread-3] Initializing /data/tom/zseries-test.oib:
[testng] [2024-11-25 01:20:29,152] [pool-1-thread-3] Initializing /data/glen/15min 200neo lyso SO1.oib:
[testng] [2024-11-25 01:20:37,533] [pool-1-thread-3] Initializing /data/yasunori/series_1.oib:
[testng] [2024-11-25 01:20:46,603] [pool-1-thread-3] Initializing /data/aryeh/061010 plate 1/Image0002_07.oib:
[testng] [2024-11-25 01:20:57,036] [pool-1-thread-3] Initializing /data/aryeh/061010 plate 1/Image0002_09.oib:
[testng] [2024-11-25 01:21:00,635] [pool-1-thread-1] Initializing /data/johannes/step2.bmp:
[testng] [2024-11-25 01:21:04,888] [pool-1-thread-1] Initializing /data/shane/Data Subset/EXX6-10G30%.oib:
[testng] [2024-11-25 01:21:08,625] [pool-1-thread-3] Initializing /data/johannes/Image0010/Image0010.oif:
[testng] [2024-11-25 01:21:19,955] [pool-1-thread-1] Initializing /data/paul/Day 4 1 FBS flat - cell 6 - green.oib:
[testng] [2024-11-25 01:21:31,167] [pool-1-thread-1] Initializing /data/johannes/Image0006/Image0006.oif:
[testng] [2024-11-25 01:24:31,883] [pool-1-thread-9] Initializing /data/aryeh/030408 2 1.oib:
[testng] [2024-11-25 01:24:42,183] [pool-1-thread-9] Initializing /data/david/Image0016.oif:
[testng] [2024-11-25 01:27:59,490] [pool-1-thread-3] Initializing /data/molly/11OCT2.OIF:
[testng] [2024-11-25 01:28:57,284] [pool-1-thread-9] Initializing /data/ramon/Image_01_01_01_01.oif:
[testng] [2024-11-25 01:29:07,952] [pool-1-thread-1] Initializing /data/aryeh/1h_after_pdt.oib:
[testng] [2024-11-25 01:29:38,638] [pool-1-thread-1] Initializing /data/shane/Data Subset/Ex3sol.oif:
[testng] [2024-11-25 01:30:48,419] [pool-1-thread-1] Initializing /data/lavinia/NM1-RibA-RibB-side.oib:
[testng] [2024-11-25 01:30:57,599] [pool-1-thread-1] Initializing /data/brian/lambda02nm.oib:
[testng] [2024-11-25 01:31:07,067] [pool-1-thread-1] Initializing /data/glen/QuitIJ/06-1728brnc3my.oib:
[testng] [2024-11-25 01:31:17,790] [pool-1-thread-1] Initializing /data/karl/Image0009.oib:
[testng] [2024-11-25 01:31:26,237] [pool-1-thread-1] Initializing /data/molly/13SH2bUTRtime4b.oib:
[testng] [2024-11-25 01:31:37,071] [pool-1-thread-1] Initializing /data/glen/4205basal106072.oif:
[testng] [2024-11-25 01:33:11,696] [pool-1-thread-8] Initializing /data/stefan/YC2_spectrum-405.oib:
[testng] [2024-11-25 01:33:23,843] [pool-1-thread-8] Initializing /data/glen/seqlinestack.oib:
[testng] [2024-11-25 01:33:37,617] [pool-1-thread-8] Initializing /data/glen/singlesimul.oib:
[testng] [2024-11-25 01:33:50,540] [pool-1-thread-8] Initializing /data/molly/11OCT9.OIF:
[testng] [2024-11-25 01:35:07,623] [pool-1-thread-9] Initializing /data/aryeh/1h.oib:
[testng] [2024-11-25 01:35:27,304] [pool-1-thread-9] Initializing /data/brian/Al488-yoyo1-2.oib:
[testng] [2024-11-25 01:35:41,851] [pool-1-thread-9] Initializing /data/aryeh/061010 plate 1/Image0002_01.oib:
[testng] [2024-11-25 01:35:55,642] [pool-1-thread-9] Initializing /data/glen/notsaturated.oib:
[testng] [2024-11-25 01:36:05,861] [pool-1-thread-9] Initializing /data/brian/FLIP.oib:
[testng] [2024-11-25 01:36:17,993] [pool-1-thread-9] Initializing /data/allan/new_30min3_1z2.oib:
[testng] [2024-11-25 01:36:34,969] [pool-1-thread-9] Initializing /data/dan/EGFR-GFP_ptyr-555 FRET test.oib:
[testng] [2024-11-25 01:36:48,324] [pool-1-thread-9] Initializing /data/simon/never_worked.oib:
[testng] [2024-11-25 01:36:57,005] [pool-1-thread-9] Initializing /data/johannes/step1.bmp:
[testng] [2024-11-25 01:37:01,338] [pool-1-thread-9] Initializing /data/aryeh/naomi/Brain 2 he1d 1.oib:
[testng] [2024-11-25 01:37:11,700] [pool-1-thread-9] Initializing /data/kay/IM2pg.oib:
[testng] [2024-11-25 01:37:20,956] [pool-1-thread-9] Initializing /data/stefan/cytosol_03e.oib:
[testng] [2024-11-25 01:37:32,920] [pool-1-thread-9] Initializing /data/molly/11OCT8.OIF:
[testng] [2024-11-25 01:38:31,067] [pool-1-thread-7] Initializing /data/brian/CagedATP CaG+FuraR3.oib:
[testng] [2024-11-25 01:38:43,024] [pool-1-thread-7] Initializing /data/public/imagesc-71616/20220824_4492_cord_dapi__iba568_60x.oib:
[testng] [2024-11-25 01:38:57,904] [pool-1-thread-7] Initializing /data/lavinia/NM1-RibB-NeuroD-uninjected.oib:
[testng] [2024-11-25 01:39:09,640] [pool-1-thread-4] Initializing /data/qa-17748/Image0079.oib:
[testng] [2024-11-25 01:39:14,281] [pool-1-thread-7] Initializing /data/glen/singleseqline.oif:
[testng] [2024-11-25 01:39:25,195] [pool-1-thread-4] Initializing /data/bojana/XYT_FirstBolus.oib:
[testng] [2024-11-25 01:39:40,281] [pool-1-thread-4] Initializing /data/glen/QuitIJ/4202A2chtest.oib:
[testng] [2024-11-25 01:39:50,788] [pool-1-thread-4] Initializing /data/barbara/Image_with_failed_import.oib:
[testng] [2024-11-25 01:39:58,128] [pool-1-thread-4] Initializing /data/shane/Data Subset/EX5-10 fresh sol.oib:
[testng] [2024-11-25 01:40:07,952] [pool-1-thread-4] Initializing /data/yoshihito/XY.oif:
[testng] [2024-11-25 01:40:41,236] [pool-1-thread-4] Initializing /data/stefan/cytosol_01a.oif:
[testng] [2024-11-25 01:42:45,449] [pool-1-thread-7] Initializing /data/brian/Rhodamine-PI-1.oib:
[testng] [2024-11-25 01:42:55,510] [pool-1-thread-7] Initializing /data/david/Image0016.oib:
[testng] [2024-11-25 01:43:02,502] [pool-1-thread-7] Initializing /data/aryeh/061010 plate 1/Image0002_08.oib:
[testng] [2024-11-25 01:43:07,591] [pool-1-thread-12] Initializing /data/molly/11OCT7.OIF:
[testng] [2024-11-25 01:43:32,921] [pool-1-thread-7] Initializing /data/stefan/121206_IHC_Ncad_647_in_515_WT_36hpf_e1.oib:
[testng] [2024-11-25 01:43:39,686] [pool-1-thread-7] Initializing /data/glen/QuitIJ/4202A2chtest.oif:
[testng] [2024-11-25 01:44:00,287] [pool-1-thread-6] Initializing /data/allan/62909#1.oib:
[testng] [2024-11-25 01:44:07,755] [pool-1-thread-6] Initializing /data/molly/11OCT11.OIF:
[testng] [2024-11-25 01:47:10,827] [pool-1-thread-5] Initializing /data/glen/simulstack.oif:
[testng] [2024-11-25 01:48:41,415] [pool-1-thread-2] Initializing /data/brian/LILY POLLEN.oib:
[testng] [2024-11-25 01:48:54,460] [pool-1-thread-2] Initializing /data/molly/11OCT10.OIF:
[testng] [2024-11-25 01:53:37,846] [pool-1-thread-11] Initializing /data/brian/Kaede-Neuron-9 405XYZ1.oib:
[testng] [2024-11-25 01:53:46,788] [pool-1-thread-11] Initializing /data/christian/20min.oif:
[testng] [2024-11-25 01:54:29,424] [pool-1-thread-11] Initializing /data/brian/Caged Glu-3 point.oib:
[testng] [2024-11-25 01:54:37,245] [pool-1-thread-11] Initializing /data/aryeh/control_test.oib:
[testng] [2024-11-25 01:55:08,249] [pool-1-thread-11] Initializing /data/glen/LUT issue/UVgreenredfarred.oif:
[testng] [2024-11-25 01:57:04,693] [pool-1-thread-11] Initializing /data/alex/31h_pea3_fgf10_01_1.oif:
[testng] [2024-11-25 02:02:40,740] [pool-1-thread-7] Initializing /data/aryeh/061010 plate 1/Image0002_04.oib:
[testng] [2024-11-25 02:02:51,160] [pool-1-thread-7] Initializing /data/qa-17748/Image0098.oib:
[testng] [2024-11-25 02:03:01,164] [pool-1-thread-7] Initializing /data/stephane/817A_3-0003_01.oib:
[testng] [2024-11-25 02:03:11,812] [pool-1-thread-7] Initializing /data/tom/RGB-1.avi:
[testng] [2024-11-25 02:03:21,791] [pool-1-thread-7] Initializing /data/brian/NEURON_TIMELAPS_2.oib:
[testng] [2024-11-25 02:03:38,513] [pool-1-thread-7] Initializing /data/brian/Kaede15.oib:
[testng] [2024-11-25 02:03:52,927] [pool-1-thread-7] Initializing /data/stefan/cytosol_08b.oif:
[testng] [2024-11-25 02:12:53,230] [pool-1-thread-5] Initializing /data/glen/Null file/test change.oif:
[testng] [2024-11-25 02:13:37,583] [pool-1-thread-5] Initializing /data/yoshihito/XY.oib:
[testng] [2024-11-25 02:13:42,271] [pool-1-thread-5] Initializing /data/glen/LUT issue/60x11.oif:
[testng] [2024-11-25 02:14:09,824] [pool-1-thread-9] Initializing /data/jean-claude/villositerat0heurea.oib:
[testng] [2024-11-25 02:14:14,903] [pool-1-thread-9] Initializing /data/johannes/step4.bmp:
[testng] [2024-11-25 02:14:17,176] [pool-1-thread-9] Initializing /data/johannes/step4b.bmp:
[testng] [2024-11-25 02:14:19,375] [pool-1-thread-9] Initializing /data/simon/used_to_work.oib:
[testng] [2024-11-25 02:14:25,410] [pool-1-thread-9] Initializing /data/johannes/step3.bmp:
[testng] [2024-11-25 02:14:28,156] [pool-1-thread-9] Initializing /data/chris/missegragation-15.oib:
[testng] [2024-11-25 02:14:33,704] [pool-1-thread-9] Initializing /data/stefan/test-with-stefan071024.oib:
[testng] [2024-11-25 02:14:47,882] [pool-1-thread-1] Initializing /data/stefan/yc2_live-03.oib:
[testng] [2024-11-25 02:14:50,708] [pool-1-thread-9] Initializing /data/brian/MitoRed-POPO3.oib:
[testng] [2024-11-25 02:14:57,445] [pool-1-thread-1] Initializing /data/aryeh/BP3 3h ch2.oif:
[testng] [2024-11-25 02:15:56,427] [pool-1-thread-9] Initializing /data/aryeh/061010 plate 1/Image0002_10.oib:
[testng] [2024-11-25 02:15:58,131] [pool-1-thread-12] Initializing /data/jae/Image0001.oib:
[testng] [2024-11-25 02:16:05,990] [pool-1-thread-12] Initializing /data/glen/singlesimul.oif:
[testng] [2024-11-25 02:16:07,830] [pool-1-thread-9] Initializing /data/satoshi/60x_5x_1.oif:
[testng] [2024-11-25 02:17:31,138] [pool-1-thread-12] Initializing /data/marc/V0606L.oib:
[testng] [2024-11-25 02:17:50,959] [pool-1-thread-12] Initializing /data/aryeh/061010 plate 1/Image0002_03.oib:
[testng] [2024-11-25 02:18:01,907] [pool-1-thread-12] Initializing /data/aryeh/PIP2 ESCV control Z 1.oib:
[testng] 03:14:07,926 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
[testng] 03:14:07,926 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 03:14:07,927 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-11-25_03-14-07.log]
[testng] 03:14:07,928 |-INFO in ch.qos.logback.core.sift.SiftProcessor@15a392cc - End of configuration.
[testng] 03:59:14,538 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
[testng] 03:59:14,538 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 03:59:14,542 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-11-25_03-59-14.log]
[testng] 03:59:14,542 |-INFO in ch.qos.logback.core.sift.SiftProcessor@667f81be - End of configuration.
[testng] 04:08:43,845 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
[testng] 04:08:43,845 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 04:08:43,847 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-11-25_04-08-43.log]
[testng] 04:08:43,848 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4fad978 - End of configuration.
[testng] 04:24:26,752 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
[testng] 04:24:26,752 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 04:24:26,753 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-11-25_04-24-26.log]
[testng] 04:24:26,753 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3212ff1b - End of configuration.
[testng]
[testng] ===============================================
[testng] Bio-Formats software test suite
[testng] Total tests run: 7632, Failures: 0, Skips: 0
[testng] ===============================================
[testng]
BUILD SUCCESSFUL
Total time: 209 minutes 19 seconds
Finished: SUCCESS