Started by upstream project "BIOFORMATS-test-repo" build number 269
originally caused by:
Started by upstream project "Trigger" build number 292
originally caused by:
Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder
[BIOFORMATS-test-folder] $ /bin/bash -xe /tmp/jenkins3352762931039892469.sh
+ '[' apng = slidebook ']'
++ date +%u
+ '[' 3 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_42559_merge_ci -v /uod/idr/repos/curated/apng:/data -v /uod/idr-scratch/merge-ci/curated/apng:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
[echo] isSnapshot = true
init-title:
[echo] ----------=========== bio-formats-testing-framework ===========----------
init-timestamp:
init:
copy-resources:
compile:
[resolver:resolve] Resolving artifacts
compile-tests:
[resolver:resolve] Resolving artifacts
[javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
[javac] warning: [options] bootstrap class path not set in conjunction with -source 8
[javac] 1 warning
test-automated:
[testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket
[testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket
[testng] File leak detector installed
[testng] 04:06:55,797 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
[testng] 04:06:55,799 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - No custom configurators were discovered as a service.
[testng] 04:06:55,799 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 04:06:55,800 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 04:06:55,801 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
[testng] 04:06:55,802 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
[testng] 04:06:55,802 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 2 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
[testng] 04:06:55,802 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 04:06:55,803 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 04:06:55,803 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
[testng] 04:06:55,804 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
[testng] 04:06:55,804 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
[testng] 04:06:55,970 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
[testng] 04:06:55,971 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
[testng] 04:06:55,993 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
[testng] 04:06:55,993 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
[testng] 04:06:55,999 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
[testng] 04:06:55,999 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
[testng] 04:06:55,999 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
[testng] 04:06:55,999 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
[testng] 04:06:55,999 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@2e3967ea - End of configuration.
[testng] 04:06:56,000 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@2e6a8155 - Registering current configuration as safe fallback point
[testng] 04:06:56,001 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 198 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
[testng] [2024-11-27 04:06:56,016] [main] java.version = 17.0.2
[testng] 04:06:56,019 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
[testng] 04:06:56,019 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 04:06:56,061 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-11-27_04-06-56.log]
[testng] 04:06:56,062 |-INFO in ch.qos.logback.core.sift.SiftProcessor@798162bc - End of configuration.
[testng] [2024-11-27 04:06:56,064] [main] testng.directory = /data
[testng] [2024-11-27 04:06:56,064] [main] testng.configDirectory = /config
[testng] [2024-11-27 04:06:56,073] [main] testng.multiplier = 1.0
[testng] [2024-11-27 04:06:56,074] [main] testng.in-memory = false
[testng] [2024-11-27 04:06:56,074] [main] testng.allow-missing = false
[testng] [2024-11-27 04:06:56,074] [main] user.language = en
[testng] [2024-11-27 04:06:56,074] [main] user.country = ${user.country}
[testng] [2024-11-27 04:06:56,074] [main] Maximum heap size = 15360 MB
[testng] Scanning for files...
[testng] [2024-11-27 04:06:56,581] [main] ----------------------------------------
[testng] [2024-11-27 04:06:56,581] [main] Total files: 21
[testng] [2024-11-27 04:06:56,582] [main] Scan time: 0.507 s (24 ms/file)
[testng] [2024-11-27 04:06:56,582] [main] ----------------------------------------
[testng] Building list of tests...
[testng] Ready to test 21 files
[testng] [TestNG] Running:
[testng] Bio-Formats software test suite
[testng]
[testng] [2024-11-27 04:06:59,987] [pool-1-thread-1] Initializing /data/samples/MoonPhases.png:
[testng] 04:06:59,987 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
[testng] 04:06:59,987 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 04:06:59,989 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-11-27_04-06-59.log]
[testng] 04:06:59,989 |-INFO in ch.qos.logback.core.sift.SiftProcessor@24493c1f - End of configuration.
[testng] [2024-11-27 04:07:00,096] [pool-1-thread-12] Initializing /data/samples/Sun.png:
[testng] 04:07:00,096 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
[testng] 04:07:00,096 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 04:07:00,098 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-11-27_04-07-00.log]
[testng] 04:07:00,098 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4c18c0c4 - End of configuration.
[testng] [2024-11-27 04:07:00,160] [pool-1-thread-11] Initializing /data/qa-7473/x.png:
[testng] 04:07:00,160 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
[testng] 04:07:00,160 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 04:07:00,161 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-11-27_04-07-00.log]
[testng] 04:07:00,162 |-INFO in ch.qos.logback.core.sift.SiftProcessor@72852c02 - End of configuration.
[testng] [2024-11-27 04:07:00,214] [pool-1-thread-10] Initializing /data/samples/spinfox.png:
[testng] 04:07:00,214 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
[testng] 04:07:00,214 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 04:07:00,215 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-11-27_04-07-00.log]
[testng] 04:07:00,216 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5c64119c - End of configuration.
[testng] [2024-11-27 04:07:00,271] [pool-1-thread-9] Initializing /data/samples/daniel_coltri_one.png:
[testng] 04:07:00,271 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
[testng] 04:07:00,271 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 04:07:00,273 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-11-27_04-07-00.log]
[testng] 04:07:00,273 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2a672113 - End of configuration.
[testng] [2024-11-27 04:07:00,331] [pool-1-thread-8] Initializing /data/samples/StarV838.png:
[testng] 04:07:00,332 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
[testng] 04:07:00,332 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 04:07:00,333 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-11-27_04-07-00.log]
[testng] 04:07:00,334 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7e5a17a3 - End of configuration.
[testng] [2024-11-27 04:07:00,391] [pool-1-thread-7] Initializing /data/samples/william_wong01.png:
[testng] 04:07:00,391 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
[testng] 04:07:00,392 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 04:07:00,392 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-11-27_04-07-00.log]
[testng] 04:07:00,393 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7fb0e2b - End of configuration.
[testng] [2024-11-27 04:07:00,449] [pool-1-thread-6] Initializing /data/samples/william_wong04.png:
[testng] 04:07:00,450 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
[testng] 04:07:00,450 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 04:07:00,451 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-11-27_04-07-00.log]
[testng] 04:07:00,451 |-INFO in ch.qos.logback.core.sift.SiftProcessor@37f51f2c - End of configuration.
[testng] [2024-11-27 04:07:00,501] [pool-1-thread-5] Initializing /data/colin/test.sfstdge.png:
[testng] 04:07:00,502 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
[testng] 04:07:00,502 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 04:07:00,502 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-11-27_04-07-00.log]
[testng] 04:07:00,503 |-INFO in ch.qos.logback.core.sift.SiftProcessor@165209fe - End of configuration.
[testng] [2024-11-27 04:07:00,555] [pool-1-thread-4] Initializing /data/samples/william_wong02.png:
[testng] 04:07:00,556 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
[testng] 04:07:00,556 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 04:07:00,556 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-11-27_04-07-00.log]
[testng] 04:07:00,557 |-INFO in ch.qos.logback.core.sift.SiftProcessor@440b68ed - End of configuration.
[testng] [2024-11-27 04:07:00,607] [pool-1-thread-3] Initializing /data/samples/monkey_apng.png:
[testng] 04:07:00,607 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
[testng] 04:07:00,607 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 04:07:00,608 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-11-27_04-07-00.log]
[testng] 04:07:00,608 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2df68f02 - End of configuration.
[testng] [2024-11-27 04:07:00,660] [pool-1-thread-2] Initializing /data/samples/orbit.png:
[testng] 04:07:00,661 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
[testng] 04:07:00,661 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 04:07:00,661 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-11-27_04-07-00.log]
[testng] 04:07:00,662 |-INFO in ch.qos.logback.core.sift.SiftProcessor@dda4ba6 - End of configuration.
[testng] [2024-11-27 04:07:03,375] [pool-1-thread-11] Initializing /data/qa-7473/n.tif:
[testng] [2024-11-27 04:07:04,942] [pool-1-thread-5] Initializing /data/samples/PhugAnimation3.png:
[testng] [2024-11-27 04:07:05,454] [pool-1-thread-1] Initializing /data/samples/joanna_viera01.png:
[testng] [2024-11-27 04:07:05,509] [pool-1-thread-10] Initializing /data/samples/phug_logo.png:
[testng] [2024-11-27 04:07:05,565] [pool-1-thread-12] Initializing /data/samples/chompy2.png:
[testng] [2024-11-27 04:07:05,627] [pool-1-thread-7] Initializing /data/samples/william_wong05.png:
[testng] [2024-11-27 04:07:05,685] [pool-1-thread-2] Initializing /data/samples/atom.png:
[testng] [2024-11-27 04:07:05,736] [pool-1-thread-8] Initializing /data/samples/Matrix.png:
[testng] [2024-11-27 04:07:05,790] [pool-1-thread-3] Initializing /data/samples/daniel_coltri_two.png:
[testng]
[testng] ===============================================
[testng] Bio-Formats software test suite
[testng] Total tests run: 1113, Failures: 0, Skips: 0
[testng] ===============================================
[testng]
BUILD SUCCESSFUL
Total time: 22 seconds
Finished: SUCCESS