Started by upstream project "BIOFORMATS-test-repo" build number 271 originally caused by: Started by upstream project "Trigger" build number 293 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@6 [BIOFORMATS-test-folder@6] $ /bin/bash -xe /tmp/jenkins7891203408845729508.sh + '[' ome-tiff = slidebook ']' ++ date +%u + '[' 4 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_42692_merge_ci -v /uod/idr/repos/curated/ome-tiff:/data -v /uod/idr-scratch/merge-ci/curated/ome-tiff:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] warning: [options] source value 8 is obsolete and will be removed in a future release [javac] warning: [options] target value 8 is obsolete and will be removed in a future release [javac] warning: [options] To suppress warnings about obsolete options, use -Xlint:-options. [javac] 4 warnings test-automated: [testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket [testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket [testng] File leak detector installed [testng] 01:17:59,320 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 01:17:59,321 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - No custom configurators were discovered as a service. [testng] 01:17:59,321 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:17:59,322 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:17:59,323 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 01:17:59,323 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 01:17:59,323 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 01:17:59,323 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:17:59,324 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:17:59,324 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 01:17:59,324 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 01:17:59,325 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 01:17:59,471 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 01:17:59,472 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 01:17:59,495 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 01:17:59,495 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 01:17:59,501 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 01:17:59,501 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 01:17:59,501 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 01:17:59,501 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 01:17:59,501 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@29215f06 - End of configuration. [testng] 01:17:59,502 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@b9b00e0 - Registering current configuration as safe fallback point [testng] 01:17:59,502 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 178 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-11-28 01:17:59,511] [main] java.version = 21 [testng] 01:17:59,513 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 01:17:59,514 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:17:59,553 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-11-28_01-17-59.log] [testng] 01:17:59,554 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1b919693 - End of configuration. [testng] [2024-11-28 01:17:59,555] [main] testng.directory = /data [testng] [2024-11-28 01:17:59,556] [main] testng.configDirectory = /config [testng] [2024-11-28 01:17:59,564] [main] testng.multiplier = 1.0 [testng] [2024-11-28 01:17:59,564] [main] testng.in-memory = false [testng] [2024-11-28 01:17:59,564] [main] testng.allow-missing = false [testng] [2024-11-28 01:17:59,564] [main] user.language = en [testng] [2024-11-28 01:17:59,564] [main] user.country = ${user.country} [testng] [2024-11-28 01:17:59,564] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2024-11-28 01:23:49,529] [main] ---------------------------------------- [testng] [2024-11-28 01:23:49,529] [main] Total files: 4771 [testng] [2024-11-28 01:23:49,529] [main] Scan time: 349.964 s (73 ms/file) [testng] [2024-11-28 01:23:49,530] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 1455 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-11-28 02:16:41,147] [pool-1-thread-1] Initializing /data/ruben/experiment--2009_10_27_15_59_00/slide--S00/chamber--U00--V00/field--X02--Y04/image--L04--S00--U00--V00--J00--X02--Y04--T04--Z00--C00.ome.tif: [testng] 02:16:41,148 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 02:16:41,148 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:16:41,150 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-11-28_02-16-41.log] [testng] 02:16:41,150 |-INFO in ch.qos.logback.core.sift.SiftProcessor@49a19e5d - End of configuration. [testng] [2024-11-28 02:16:41,838] [pool-1-thread-12] Initializing /data/ruben/experiment--2009_10_27_15_59_00/slide--S00/chamber--U00--V00/field--X00--Y05/image--L03--S00--U00--V00--J00--X00--Y05--T03--Z00--C00.ome.tif: [testng] 02:16:41,838 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 02:16:41,839 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:16:41,839 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-11-28_02-16-41.log] [testng] 02:16:41,840 |-INFO in ch.qos.logback.core.sift.SiftProcessor@40a190ac - End of configuration. [testng] [2024-11-28 02:16:42,540] [pool-1-thread-11] Initializing /data/dominik/2009_09_11__14_26_33h__channel01.tif: [testng] 02:16:42,541 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 02:16:42,541 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:16:42,542 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-11-28_02-16-42.log] [testng] 02:16:42,542 |-INFO in ch.qos.logback.core.sift.SiftProcessor@46652ac1 - End of configuration. [testng] [2024-11-28 02:16:43,215] [pool-1-thread-10] Initializing /data/andor/iQMM_FURA_TIME46_WAVELENGTH0_0.ome.tif: [testng] 02:16:43,216 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 02:16:43,216 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:16:43,216 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-11-28_02-16-43.log] [testng] 02:16:43,217 |-INFO in ch.qos.logback.core.sift.SiftProcessor@23cfdabe - End of configuration. [testng] [2024-11-28 02:16:43,914] [pool-1-thread-9] Initializing /data/ruben/experiment--2009_10_27_15_59_00/slide--S00/chamber--U00--V00/field--X06--Y05/image--L06--S00--U00--V00--J00--X06--Y05--T06--Z00--C00.ome.tif: [testng] 02:16:43,915 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 02:16:43,915 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:16:43,915 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-11-28_02-16-43.log] [testng] 02:16:43,916 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7b20de5e - End of configuration. [testng] [2024-11-28 02:16:44,598] [pool-1-thread-8] Initializing /data/ruben/experiment--2009_10_27_15_59_00/slide--S00/chamber--U00--V00/field--X00--Y00/image--L09--S00--U00--V00--J00--X00--Y00--T09--Z00--C00.ome.tif: [testng] 02:16:44,599 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 02:16:44,599 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:16:44,599 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-11-28_02-16-44.log] [testng] 02:16:44,600 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7c495897 - End of configuration. [testng] [2024-11-28 02:16:45,229] [pool-1-thread-7] Initializing /data/ruben/experiment--2009_10_27_15_59_00/slide--S00/chamber--U00--V00/field--X00--Y05/image--L12--S00--U00--V00--J00--X00--Y05--T12--Z00--C00.ome.tif: [testng] 02:16:45,229 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 02:16:45,229 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:16:45,230 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-11-28_02-16-45.log] [testng] 02:16:45,231 |-INFO in ch.qos.logback.core.sift.SiftProcessor@36d40569 - End of configuration. [testng] [2024-11-28 02:16:45,909] [pool-1-thread-6] Initializing /data/andor/iQMM_FURA_TIME118_WAVELENGTH0_0.ome.tif: [testng] 02:16:45,909 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 02:16:45,909 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:16:45,910 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-11-28_02-16-45.log] [testng] 02:16:45,910 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3c758b01 - End of configuration. [testng] [2024-11-28 02:16:46,603] [pool-1-thread-5] Initializing /data/ruben/experiment--2009_10_27_15_59_00/slide--S00/chamber--U00--V00/field--X00--Y04/image--L05--S00--U00--V00--J00--X00--Y04--T05--Z00--C00.ome.tif: [testng] 02:16:46,603 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 02:16:46,603 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:16:46,603 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-11-28_02-16-46.log] [testng] 02:16:46,604 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6bda19b - End of configuration. [testng] [2024-11-28 02:16:47,322] [pool-1-thread-4] Initializing /data/ruben/experiment--2009_10_27_15_59_00/slide--S00/chamber--U00--V00/field--X03--Y06/image--L09--S00--U00--V00--J00--X03--Y06--T09--Z00--C00.ome.tif: [testng] 02:16:47,323 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 02:16:47,323 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:16:47,324 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-11-28_02-16-47.log] [testng] 02:16:47,324 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6c2cae6a - End of configuration. [testng] [2024-11-28 02:16:47,998] [pool-1-thread-3] Initializing /data/ruben/experiment--2009_10_27_15_59_00/slide--S00/chamber--U00--V00/field--X05--Y03/image--L05--S00--U00--V00--J00--X05--Y03--T05--Z00--C00.ome.tif: [testng] 02:16:47,999 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 02:16:47,999 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:16:47,999 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-11-28_02-16-47.log] [testng] 02:16:48,000 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3e7bb1ee - End of configuration. [testng] [2024-11-28 02:16:48,661] [pool-1-thread-2] Initializing /data/ruben/experiment--2009_10_27_15_59_00/slide--S00/chamber--U00--V00/field--X05--Y03/image--L12--S00--U00--V00--J00--X05--Y03--T12--Z00--C00.ome.tif: [testng] 02:16:48,661 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 02:16:48,661 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:16:48,662 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-11-28_02-16-48.log] [testng] 02:16:48,662 |-INFO in ch.qos.logback.core.sift.SiftProcessor@36dc19ae - End of configuration. [testng] [2024-11-28 02:17:10,055] [pool-1-thread-12] Initializing /data/public/2016-06/BBBC017/single-file/NIRHTa+001.ome.tiff: [testng] [2024-11-28 02:18:40,743] [pool-1-thread-8] Initializing /data/andor/iQMM_FURA_TIME48_WAVELENGTH1_0.ome.tif: [testng] [2024-11-28 02:18:41,631] [pool-1-thread-9] Initializing /data/andor/iQMM_FURA_TIME164_WAVELENGTH0_0.ome.tif: [testng] [2024-11-28 02:18:42,409] [pool-1-thread-4] Initializing /data/ruben/experiment--2009_10_27_15_59_00/slide--S00/chamber--U00--V00/field--X02--Y02/image--L12--S00--U00--V00--J00--X02--Y02--T12--Z00--C00.ome.tif: [testng] [2024-11-28 02:18:43,174] [pool-1-thread-2] Initializing /data/andor/iQMM_FURA_TIME92_WAVELENGTH1_0.ome.tif: [testng] [2024-11-28 02:18:43,897] [pool-1-thread-7] Initializing /data/andor/iQMM_FURA_TIME165_WAVELENGTH0_0.ome.tif: [testng] [2024-11-28 02:18:44,669] [pool-1-thread-5] Initializing /data/andor/iQMM_FURA_TIME99_WAVELENGTH1_0.ome.tif: [testng] [2024-11-28 02:18:45,397] [pool-1-thread-1] Initializing /data/ruben/experiment--2009_10_27_15_59_00/slide--S00/chamber--U00--V00/field--X01--Y02/image--L08--S00--U00--V00--J00--X01--Y02--T08--Z00--C00.ome.tif: [testng] [2024-11-28 02:18:46,597] [pool-1-thread-3] Initializing /data/mark/20090422bead20x_C1.ome.tif: [testng] [2024-11-28 02:18:49,008] [pool-1-thread-10] Initializing /data/glen/OMETiff Slidebook donotopen/Capture 2 - Position 1_XY1306537975_Z00_T003_C1.tiff: [testng] [2024-11-28 02:18:51,048] [pool-1-thread-6] Initializing /data/ruben/experiment--2009_10_27_15_59_00/slide--S00/chamber--U00--V00/field--X05--Y06/image--L13--S00--U00--V00--J00--X05--Y06--T13--Z00--C00.ome.tif: [testng] [2024-11-28 02:18:53,293] [pool-1-thread-11] Initializing /data/glen/OMETiff Slidebook donotopen/Capture 2 - Position 1_XY1306537975_Z00_T002_C1.tiff: [testng] [2024-11-28 02:19:05,609] [pool-1-thread-3] Initializing /data/ruben/experiment--2009_10_27_15_59_00/slide--S00/chamber--U00--V00/field--X02--Y05/image--L13--S00--U00--V00--J00--X02--Y05--T13--Z00--C00.ome.tif: [testng] [2024-11-28 02:19:07,528] [pool-1-thread-10] Initializing /data/ruben/experiment--2009_10_27_15_59_00/slide--S00/chamber--U00--V00/field--X05--Y03/image--L09--S00--U00--V00--J00--X05--Y03--T09--Z00--C00.ome.tif: [testng] [2024-11-28 02:19:09,266] [pool-1-thread-11] Initializing /data/heinrich/part2/9061958 Ex590.ome.tif: [testng] [2024-11-28 02:19:12,524] [pool-1-thread-1] Initializing /data/ruben/experiment--2009_10_27_15_59_00/slide--S00/chamber--U00--V00/field--X00--Y06/image--L00--S00--U00--V00--J00--X00--Y06--T00--Z00--C00.ome.tif: [testng] [2024-11-28 02:19:13,370] [pool-1-thread-4] Initializing /data/ruben/experiment--2009_10_27_15_59_00/slide--S00/chamber--U00--V00/field--X05--Y03/image--L04--S00--U00--V00--J00--X05--Y03--T04--Z00--C00.ome.tif: [testng] [2024-11-28 02:19:14,375] [pool-1-thread-6] Initializing /data/ruben/experiment--2009_10_27_15_59_00/slide--S00/chamber--U00--V00/field--X05--Y06/image--L10--S00--U00--V00--J00--X05--Y06--T10--Z00--C00.ome.tif: [testng] [2024-11-28 02:19:15,102] [pool-1-thread-7] Initializing /data/prairie/TSeries-12062007-1400-093/TSeries-12062007-1400-093.xml: [testng] [2024-11-28 02:19:16,062] [pool-1-thread-9] Initializing /data/ruben/experiment--2009_10_27_15_59_00/slide--S00/chamber--U00--V00/field--X02--Y04/image--L07--S00--U00--V00--J00--X02--Y04--T07--Z00--C00.ome.tif: [testng] [2024-11-28 02:19:17,109] [pool-1-thread-2] Initializing /data/glen/OMETiff Slidebook donotopen/Capture 2 - Position 1_XY1306537975_Z00_T001_C1.tiff: [testng] [2024-11-28 02:19:17,982] [pool-1-thread-8] Initializing /data/andor/iQMM_FURA_TIME182_WAVELENGTH0_0.ome.tif: [testng] [2024-11-28 02:19:18,697] [pool-1-thread-5] Initializing 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Initializing /data/ruben/experiment--2009_10_27_15_59_00/slide--S00/chamber--U00--V00/field--X03--Y03/image--L04--S00--U00--V00--J00--X03--Y03--T04--Z00--C00.ome.tif: [testng] [2024-11-28 03:36:13,363] [pool-1-thread-7] Initializing /data/andor/iQMM_FURA_TIME127_WAVELENGTH1_0.ome.tif: [testng] [2024-11-28 03:36:15,050] [pool-1-thread-5] Initializing /data/ruben/experiment--2009_10_27_15_59_00/slide--S00/chamber--U00--V00/field--X00--Y00/image--L03--S00--U00--V00--J00--X00--Y00--T03--Z00--C00.ome.tif: [testng] [2024-11-28 03:36:20,544] [pool-1-thread-8] Initializing /data/ruben/experiment--2009_10_27_15_59_00/slide--S00/chamber--U00--V00/field--X00--Y00/image--L14--S00--U00--V00--J00--X00--Y00--T14--Z00--C00.ome.tif: [testng] [2024-11-28 03:36:22,312] [pool-1-thread-9] Initializing /data/ruben/experiment--2009_10_27_15_59_00/slide--S00/chamber--U00--V00/field--X04--Y02/image--L04--S00--U00--V00--J00--X04--Y02--T04--Z00--C00.ome.tif: [testng] [2024-11-28 03:36:26,772] [pool-1-thread-10] Initializing /data/olaf/falseColorData&indexed=true&falseColor=true&sizeT=10&sizeC=3.fake: [testng] [2024-11-28 03:36:32,124] [pool-1-thread-12] Initializing /data/ruben/experiment--2009_10_27_15_59_00/slide--S00/chamber--U00--V00/field--X01--Y03/image--L10--S00--U00--V00--J00--X01--Y03--T10--Z00--C00.ome.tif: [testng] [2024-11-28 03:36:34,064] [pool-1-thread-5] Initializing /data/ruben/experiment--2009_10_27_15_59_00/slide--S00/chamber--U00--V00/field--X04--Y05/image--L11--S00--U00--V00--J00--X04--Y05--T11--Z00--C00.ome.tif: [testng] [2024-11-28 03:36:37,959] [pool-1-thread-7] Initializing /data/ruben/experiment--2009_10_27_15_59_00/slide--S00/chamber--U00--V00/field--X00--Y00/image--L04--S00--U00--V00--J00--X00--Y00--T04--Z00--C00.ome.tif: [testng] [2024-11-28 03:36:44,301] [pool-1-thread-9] Initializing /data/ruben/experiment--2009_10_27_15_59_00/slide--S00/chamber--U00--V00/field--X00--Y01/image--L14--S00--U00--V00--J00--X00--Y01--T14--Z00--C00.ome.tif: [testng] [2024-11-28 03:36:46,071] [pool-1-thread-8] Initializing /data/ruben/experiment--2009_10_27_15_59_00/slide--S00/chamber--U00--V00/field--X06--Y02/image--L07--S00--U00--V00--J00--X06--Y02--T07--Z00--C00.ome.tif: [testng] [2024-11-28 03:36:47,810] [pool-1-thread-10] Initializing /data/andor/iQMM_FURA_TIME27_WAVELENGTH0_0.ome.tif: [testng] [2024-11-28 03:36:53,679] [pool-1-thread-5] Initializing /data/andor/iQMM_FURA_TIME6_WAVELENGTH1_0.ome.tif: [testng] [2024-11-28 03:36:55,364] [pool-1-thread-12] Initializing /data/ruben/experiment--2009_10_27_15_59_00/slide--S00/chamber--U00--V00/field--X05--Y06/image--L09--S00--U00--V00--J00--X05--Y06--T09--Z00--C00.ome.tif: [testng] [2024-11-28 03:37:00,676] [pool-1-thread-7] Initializing /data/curtis/scrambled.ome.tif: [testng] [2024-11-28 03:37:10,367] [pool-1-thread-9] Initializing /data/andor/iQMM_FURA_TIME43_WAVELENGTH0_0.ome.tif: [testng] [2024-11-28 03:37:12,144] [pool-1-thread-8] Initializing /data/ruben/experiment--2009_10_27_15_59_00/slide--S00/chamber--U00--V00/field--X00--Y02/image--L08--S00--U00--V00--J00--X00--Y02--T08--Z00--C00.ome.tif: [testng] [2024-11-28 03:37:15,593] [pool-1-thread-10] Initializing /data/ruben/experiment--2009_10_27_15_59_00/slide--S00/chamber--U00--V00/field--X00--Y00/image--L01--S00--U00--V00--J00--X00--Y00--T01--Z00--C00.ome.tif: [testng] [2024-11-28 03:37:17,903] [pool-1-thread-12] Initializing /data/ruben/experiment--2009_10_27_15_59_00/slide--S00/chamber--U00--V00/field--X02--Y02/image--L07--S00--U00--V00--J00--X02--Y02--T07--Z00--C00.ome.tif: [testng] [2024-11-28 03:37:23,313] [pool-1-thread-5] Initializing /data/andor/iQMM_FURA_TIME150_WAVELENGTH0_0.ome.tif: [testng] [2024-11-28 03:37:31,076] [pool-1-thread-8] Initializing /data/ruben/experiment--2009_10_27_15_43_34/slide--S00/chamber--U00--V00/field--X00--Y00/image--L00--S00--U00--V00--J00--X00--Y00--T00--Z00--C00.ome.tif: [testng] [2024-11-28 03:37:32,538] [pool-1-thread-7] Initializing /data/ruben/experiment--2009_10_27_15_59_00/slide--S00/chamber--U00--V00/field--X01--Y00/image--L04--S00--U00--V00--J00--X01--Y00--T04--Z00--C00.ome.tif: [testng] 04:34:14,717 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 04:34:14,718 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:34:14,720 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-11-28_04-34-14.log] [testng] 04:34:14,720 |-INFO in ch.qos.logback.core.sift.SiftProcessor@29d38355 - End of configuration. [testng] 05:27:40,058 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 05:27:40,058 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 05:27:40,060 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-11-28_05-27-40.log] [testng] 05:27:40,060 |-INFO in ch.qos.logback.core.sift.SiftProcessor@15a1518b - End of configuration. [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 77115, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 249 minutes 44 seconds Finished: SUCCESS