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Started by upstream project "BIOFORMATS-test-repo" build number 271 originally caused by: Started by upstream project "Trigger" build number 293 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@9 [BIOFORMATS-test-folder@9] $ /bin/bash -xe /tmp/jenkins1485012212625427948.sh + '[' zeiss-tiff = slidebook ']' ++ date +%u + '[' 4 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_42760_merge_ci -v /uod/idr/repos/curated/zeiss-tiff:/data -v /uod/idr-scratch/merge-ci/curated/zeiss-tiff:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] warning: [options] source value 8 is obsolete and will be removed in a future release [javac] warning: [options] target value 8 is obsolete and will be removed in a future release [javac] warning: [options] To suppress warnings about obsolete options, use -Xlint:-options. [javac] 4 warnings test-automated: [testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket [testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket [testng] File leak detector installed [testng] 04:24:45,759 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 04:24:45,761 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - No custom configurators were discovered as a service. [testng] 04:24:45,761 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 04:24:45,762 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 04:24:45,762 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 04:24:45,763 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 04:24:45,763 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 04:24:45,763 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 04:24:45,764 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 04:24:45,764 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 04:24:45,764 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 04:24:45,765 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 04:24:45,922 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 04:24:45,922 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 04:24:45,946 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 04:24:45,946 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 04:24:45,952 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 04:24:45,953 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 04:24:45,953 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 04:24:45,953 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 04:24:45,953 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@29215f06 - End of configuration. [testng] 04:24:45,954 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@b9b00e0 - Registering current configuration as safe fallback point [testng] 04:24:45,954 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 190 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-11-28 04:24:45,962] [main] java.version = 21 [testng] 04:24:45,966 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 04:24:45,966 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:24:46,007 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-11-28_04-24-45.log] [testng] 04:24:46,009 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1b919693 - End of configuration. [testng] [2024-11-28 04:24:46,010] [main] testng.directory = /data [testng] [2024-11-28 04:24:46,011] [main] testng.configDirectory = /config [testng] [2024-11-28 04:24:46,019] [main] testng.multiplier = 1.0 [testng] [2024-11-28 04:24:46,020] [main] testng.in-memory = false [testng] [2024-11-28 04:24:46,020] [main] testng.allow-missing = false [testng] [2024-11-28 04:24:46,020] [main] user.language = en [testng] [2024-11-28 04:24:46,020] [main] user.country = ${user.country} [testng] [2024-11-28 04:24:46,020] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2024-11-28 04:29:29,475] [main] ---------------------------------------- [testng] [2024-11-28 04:29:29,475] [main] Total files: 15735 [testng] [2024-11-28 04:29:29,475] [main] Scan time: 283.455 s (18 ms/file) [testng] [2024-11-28 04:29:29,475] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 125 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-11-28 04:34:25,399] [pool-1-thread-1] Initializing /data/converted/markus/PC12_neuroblastoma_Fura2_exp#9.tif: [testng] 04:34:25,400 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 04:34:25,400 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:34:25,401 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-11-28_04-34-25.log] [testng] 04:34:25,401 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5f8376c9 - End of configuration. [testng] [2024-11-28 04:34:27,915] [pool-1-thread-12] Initializing /data/converted/joseph/E-2009_0022.tif: [testng] 04:34:27,915 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 04:34:27,915 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:34:27,916 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-11-28_04-34-27.log] [testng] 04:34:27,916 |-INFO in ch.qos.logback.core.sift.SiftProcessor@27f733b0 - End of configuration. [testng] [2024-11-28 04:34:29,743] [pool-1-thread-11] Initializing /data/samples/mri-stack/mri-stack.tif: [testng] 04:34:29,743 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 04:34:29,744 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:34:29,744 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-11-28_04-34-29.log] [testng] 04:34:29,745 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7890d7b0 - End of configuration. [testng] [2024-11-28 04:34:30,717] [pool-1-thread-10] Initializing /data/converted/monica/Monica_elegans_movie.tif: [testng] 04:34:30,717 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 04:34:30,717 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:34:30,718 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-11-28_04-34-30.log] [testng] 04:34:30,718 |-INFO in ch.qos.logback.core.sift.SiftProcessor@26b86d93 - End of configuration. [testng] [2024-11-28 04:34:34,746] [pool-1-thread-9] Initializing /data/converted/dan/zstack_convalaria.tif: [testng] 04:34:34,746 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 04:34:34,746 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:34:34,747 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-11-28_04-34-34.log] [testng] 04:34:34,747 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4f4db137 - End of configuration. [testng] [2024-11-28 04:34:35,967] [pool-1-thread-8] Initializing /data/converted/lior/live+cf5b.tif: [testng] 04:34:35,967 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 04:34:35,967 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:34:35,968 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-11-28_04-34-35.log] [testng] 04:34:35,968 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4931209 - End of configuration. [testng] [2024-11-28 04:34:37,768] [pool-1-thread-7] Initializing /data/scott/Slide133-01.tif: [testng] 04:34:37,768 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 04:34:37,768 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:34:37,769 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-11-28_04-34-37.log] [testng] 04:34:37,769 |-INFO in ch.qos.logback.core.sift.SiftProcessor@e93722d - End of configuration. [testng] [2024-11-28 04:34:39,887] [pool-1-thread-6] Initializing /data/scott/Slide133-04.tif: [testng] 04:34:39,887 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 04:34:39,887 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:34:39,888 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-11-28_04-34-39.log] [testng] 04:34:39,888 |-INFO in ch.qos.logback.core.sift.SiftProcessor@9e0ae01 - End of configuration. [testng] [2024-11-28 04:34:41,697] [pool-1-thread-5] Initializing /data/converted/markus/Brain_high_dynamic_range_imaging_Z-stack.tif: [testng] 04:34:41,697 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 04:34:41,698 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:34:41,698 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-11-28_04-34-41.log] [testng] 04:34:41,699 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5c0a8985 - End of configuration. [testng] [2024-11-28 04:34:43,541] [pool-1-thread-4] Initializing /data/converted/jeffrey/750-30-03.tif: [testng] 04:34:43,541 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 04:34:43,541 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:34:43,541 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-11-28_04-34-43.log] [testng] 04:34:43,542 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2b16d39c - End of configuration. [testng] [2024-11-28 04:34:45,177] [pool-1-thread-3] Initializing /data/qa-21570/250618_J1_diff_D3-2-0004.tif: [testng] 04:34:45,177 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 04:34:45,177 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:34:45,178 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-11-28_04-34-45.log] [testng] 04:34:45,178 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6622a159 - End of configuration. [testng] [2024-11-28 04:34:46,649] [pool-1-thread-2] Initializing /data/scott/Slide133-08.tif: [testng] 04:34:46,649 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 04:34:46,649 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:34:46,650 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-11-28_04-34-46.log] [testng] 04:34:46,650 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3bce6f07 - End of configuration. [testng] [2024-11-28 04:35:16,426] [pool-1-thread-11] Initializing /data/converted/michel/c.tif: [testng] [2024-11-28 04:35:18,910] [pool-1-thread-3] Initializing /data/converted/dietmar/hmads-bac1-bac7-af488-rho-af647_pre-2006-03-30-ten.tif: [testng] [2024-11-28 04:35:21,120] [pool-1-thread-7] Initializing /data/converted/markus/Mouse-newborn-panorama.tif: [testng] [2024-11-28 04:35:22,717] [pool-1-thread-6] Initializing /data/converted/converted/damian.tif: [testng] [2024-11-28 04:35:24,754] [pool-1-thread-2] Initializing /data/converted/converted/deconvolve6_pseudo_tl000_zs000.tif: [testng] [2024-11-28 04:35:37,369] [pool-1-thread-4] Initializing /data/converted/eirinn/12_2_2009-16-hes5-brdu-proper_position(52).tif: [testng] [2024-11-28 04:35:39,555] [pool-1-thread-9] Initializing /data/converted/sebastien/F1.tif: [testng] [2024-11-28 04:35:53,491] [pool-1-thread-8] Initializing /data/converted/rachel/40K 30s A2.tif: [testng] [2024-11-28 04:36:02,811] [pool-1-thread-6] Initializing /data/converted/eirinn/12_16_2009-01-tara-hd-triple-5to15_position(1)5.tif: [testng] [2024-11-28 04:36:05,947] [pool-1-thread-2] Initializing /data/converted/kelsey/1300x1030BW.tif: [testng] [2024-11-28 04:36:18,815] [pool-1-thread-11] Initializing /data/converted/markus/Branchiostoma_6x12_MosaiX_Tiles_color.tif: [testng] [2024-11-28 04:36:29,423] [pool-1-thread-7] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast.tif: [testng] [2024-11-28 04:36:42,009] [pool-1-thread-8] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_2.tif: [testng] [2024-11-28 04:36:44,906] [pool-1-thread-2] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_24.tif: [testng] [2024-11-28 04:39:53,334] [pool-1-thread-5] Initializing /data/converted/markus/Hypocampus_Tiles_with_stiching.tif: [testng] [2024-11-28 04:40:38,732] [pool-1-thread-9] Initializing /data/scott/Slide133-11.tif: [testng] [2024-11-28 04:41:01,556] [pool-1-thread-4] Initializing /data/converted/rachel/40K 30s A1.tif: [testng] [2024-11-28 04:41:16,844] [pool-1-thread-9] Initializing /data/converted/markus/PhaseGFP-MosaiX-Timelapse_Tiles.tif: [testng] [2024-11-28 04:41:24,764] [pool-1-thread-3] Initializing /data/converted/thomas/test_axiocam_3_1.tif: [testng] [2024-11-28 04:41:51,070] [pool-1-thread-4] Initializing /data/converted/converted/wtzer_series76_z003_ch00.tif: [testng] [2024-11-28 04:42:08,430] [pool-1-thread-3] Initializing /data/converted/michel/b.tif: [testng] [2024-11-28 04:42:23,892] [pool-1-thread-4] Initializing /data/converted/converted/2chzt.tif: [testng] [2024-11-28 04:43:01,238] [pool-1-thread-3] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_23.tif: [testng] [2024-11-28 04:43:26,752] [pool-1-thread-5] Initializing /data/converted/joseph/BEST_EXAMPLE_LONGER_EXPOSURE.tif: [testng] [2024-11-28 04:43:54,565] [pool-1-thread-6] Initializing /data/converted/karsten/Bild2.tif: [testng] [2024-11-28 04:44:43,806] [pool-1-thread-6] Initializing /data/converted/dan/adultnr1.tif: [testng] [2024-11-28 04:45:15,415] [pool-1-thread-5] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_19.tif: [testng] [2024-11-28 04:45:20,215] [pool-1-thread-11] Initializing /data/converted/joseph/E-2009-0001a.tif: [testng] [2024-11-28 04:46:10,460] [pool-1-thread-6] Initializing /data/converted/markus/Smart_Experiment_4ch-T-time-stitched.tif: [testng] [2024-11-28 04:46:59,070] [pool-1-thread-8] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast-sectioned.tif: [testng] [2024-11-28 04:47:59,434] [pool-1-thread-2] Initializing /data/converted/karsten/Bild1.tif: [testng] [2024-11-28 04:48:53,026] [pool-1-thread-2] Initializing /data/converted/dietmar/dapi-texasred-0015.tif: [testng] [2024-11-28 04:48:55,860] [pool-1-thread-12] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_1.tif: [testng] [2024-11-28 04:51:10,955] [pool-1-thread-7] Initializing /data/converted/nicolas/image.tif: [testng] [2024-11-28 04:51:44,049] [pool-1-thread-7] Initializing /data/converted/james/Sylvain_run3_1Gy_Live7-2008-0019.tif: [testng] [2024-11-28 04:54:03,541] [pool-1-thread-7] Initializing /data/converted/dietmar/137.tif: [testng] [2024-11-28 04:54:07,941] [pool-1-thread-3] Initializing /data/converted/eirinn/pharm3-saline2-0147_11.tif: [testng] [2024-11-28 04:54:43,319] [pool-1-thread-9] Initializing /data/qa-21570/250618_J1_diff_D3-2-0003.tif: [testng] [2024-11-28 04:55:48,831] [pool-1-thread-9] Initializing /data/converted/markus/Mouse-newborn-panorama_JPEG_5percent_compressed.tif: [testng] [2024-11-28 04:57:25,609] [pool-1-thread-9] Initializing /data/converted/rolf/example_1-2010_11_25.tif: [testng] [2024-11-28 04:58:03,711] [pool-1-thread-5] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_22.tif: [testng] [2024-11-28 04:58:08,241] [pool-1-thread-2] Initializing /data/converted/markus/Long_TL_CElegans.tif: [testng] [2024-11-28 04:58:33,370] [pool-1-thread-9] Initializing /data/converted/converted/mri-stack.tif: [testng] [2024-11-28 04:59:27,841] [pool-1-thread-9] Initializing /data/converted/michel/a.tif: [testng] [2024-11-28 05:00:18,569] [pool-1-thread-9] Initializing /data/converted/sebastien/test.tif: [testng] [2024-11-28 05:00:29,717] [pool-1-thread-12] Initializing /data/converted/dietmar/hmads-bac1-bac7-af488-rho-af647_pre-2006-03-30-six.tif: [testng] [2024-11-28 05:00:50,210] [pool-1-thread-11] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_3.tif: [testng] [2024-11-28 05:04:48,069] [pool-1-thread-8] Initializing /data/converted/ville/MultiCh-RGB/pollen_rgb.tif: [testng] [2024-11-28 05:05:48,218] [pool-1-thread-8] Initializing /data/othmar/mozaic.tif: [testng] [2024-11-28 05:06:45,317] [pool-1-thread-3] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_13.tif: [testng] [2024-11-28 05:07:59,460] [pool-1-thread-12] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_16.tif: [testng] [2024-11-28 05:08:18,166] [pool-1-thread-7] Initializing /data/converted/rolf/example_2-2010_11_25.tif: [testng] [2024-11-28 05:09:10,351] [pool-1-thread-7] Initializing /data/converted/converted/2chz.tif: [testng] [2024-11-28 05:12:03,653] [pool-1-thread-5] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_4.tif: [testng] [2024-11-28 05:12:14,351] [pool-1-thread-8] Initializing /data/converted/kelsey/650x514BW.tif: [testng] [2024-11-28 05:12:56,749] [pool-1-thread-8] Initializing /data/dorai/F_ZImage10_(X10)_C.tif: [testng] [2024-11-28 05:13:03,276] [pool-1-thread-6] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast-sidebyside.tif: [testng] [2024-11-28 05:13:41,527] [pool-1-thread-11] Initializing /data/converted/darren/section0001_w1.tif: [testng] [2024-11-28 05:13:59,999] [pool-1-thread-8] Initializing /data/converted/strand/2Colors1Plane.tif: [testng] [2024-11-28 05:14:34,707] [pool-1-thread-11] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_8.tif: [testng] [2024-11-28 05:14:48,815] [pool-1-thread-7] Initializing /data/converted/markus/HighSpeedParas.tif: [testng] [2024-11-28 05:15:04,375] [pool-1-thread-9] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_9.tif: [testng] [2024-11-28 05:15:56,219] [pool-1-thread-8] Initializing /data/converted/joseph/Alike_best_example_but_WORKS_FINE_maybe_cause_shorter_expose.tif: [testng] [2024-11-28 05:19:32,344] [pool-1-thread-8] Initializing /data/converted/markus/30channels_exposure-series.tif: [testng] [2024-11-28 05:20:09,953] [pool-1-thread-3] Initializing /data/converted/david/snap-181518-0001.tif: [testng] [2024-11-28 05:20:54,310] [pool-1-thread-3] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_25.tif: [testng] [2024-11-28 05:22:17,075] [pool-1-thread-12] Initializing /data/qa-21570/250618_J1_diff_D3-2-0002.tif: [testng] [2024-11-28 05:22:58,868] [pool-1-thread-12] Initializing /data/converted/eirinn/11_10_2009-01-lcstim-15-10-09_position(1).tif: [testng] [2024-11-28 05:23:32,234] [pool-1-thread-8] Initializing /data/converted/ville/MultiCh-RGB/pollen_bw.tif: [testng] [2024-11-28 05:24:29,490] [pool-1-thread-8] Initializing /data/converted/jan/SampleStack_Mosaic4x5_comb.tif: [testng] [2024-11-28 05:24:46,903] [pool-1-thread-5] Initializing /data/converted/vladan/vladan.tif: [testng] [2024-11-28 05:27:57,832] [pool-1-thread-11] Initializing /data/qa-21570/20150421_HepG2_yH2AX_DAPI_0.5h_5GyDOWN_1512_cell04_SIR_ALX.dv_comp.tif: [testng] [2024-11-28 05:28:17,595] [pool-1-thread-11] Initializing /data/converted/darren/section0002_w1.tif: [testng] [2024-11-28 05:28:27,759] [pool-1-thread-9] Initializing /data/converted/joseph/E-2009-0004.tif: [testng] [2024-11-28 05:29:06,096] [pool-1-thread-11] Initializing /data/converted/converted/damian-compressed.tif: [testng] [2024-11-28 05:29:46,591] [pool-1-thread-12] Initializing /data/converted/michel/d.tif: [testng] [2024-11-28 05:29:49,707] [pool-1-thread-11] Initializing /data/converted/jonas/10_0907_multidrug-0001_AB01_08.tif: [testng] [2024-11-28 05:30:48,432] [pool-1-thread-12] Initializing /data/converted/karsten/247096n3s3s9.tif: [testng] [2024-11-28 05:31:25,721] [pool-1-thread-1] Initializing /data/converted/dietmar/hmads-bac1-bac7-af488-rho-af647_pre-2006-03-30-0016.tif: [testng] [2024-11-28 05:32:04,791] [pool-1-thread-6] Initializing /data/converted/markus/6ch-Z-stack_deconvolved.tif: [testng] [2024-11-28 05:34:32,544] [pool-1-thread-12] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast-widefield.tif: [testng] [2024-11-28 05:35:12,670] [pool-1-thread-5] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_12.tif: [testng] [2024-11-28 05:35:16,040] [pool-1-thread-3] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_5.tif: [testng] [2024-11-28 05:36:24,402] [pool-1-thread-1] Initializing /data/converted/eirinn/demo-tile.tif: [testng] [2024-11-28 05:37:37,883] [pool-1-thread-1] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_21.tif: [testng] [2024-11-28 05:37:52,589] [pool-1-thread-4] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_6.tif: [testng] [2024-11-28 05:44:47,251] [pool-1-thread-9] Initializing /data/converted/markus/Mouse-newborn-panorama_lossless_compressed.tif: [testng] [2024-11-28 05:45:56,890] [pool-1-thread-9] Initializing /data/converted/kelsey/432x342BW.tif: [testng] [2024-11-28 05:46:37,476] [pool-1-thread-9] Initializing /data/converted/eirinn/5_6_2009-dj9-03_a01_01.tif: [testng] [2024-11-28 05:47:53,400] [pool-1-thread-9] Initializing /data/converted/lior/live+cf2b.tif: [testng] [2024-11-28 05:48:09,222] [pool-1-thread-3] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_18.tif: [testng] [2024-11-28 05:48:29,367] [pool-1-thread-6] Initializing /data/converted/jonas/10_0907_multidrug-0001_AB01_03.tif: [testng] [2024-11-28 05:48:48,373] [pool-1-thread-5] Initializing /data/converted/markus/MosaiX_irregular_Z-stack_with_autofocus.tif: [testng] [2024-11-28 05:49:08,437] [pool-1-thread-9] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_11.tif: [testng] [2024-11-28 05:50:33,011] [pool-1-thread-4] Initializing /data/converted/markus/Confidence_ratio_image_PC12_neuroblastoma_Fura2_exp#9-2.tif: [testng] [2024-11-28 05:51:04,185] [pool-1-thread-1] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_15.tif: [testng] [2024-11-28 05:52:48,948] [pool-1-thread-12] Initializing /data/converted/dietmar/hmads-24h-bac1-7-af647-af488-rho-1day-hyb-csk-2007-06-29-0008_position(113).tif: [testng] [2024-11-28 05:56:46,753] [pool-1-thread-2] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_10.tif: [testng] [2024-11-28 05:57:19,614] [pool-1-thread-11] Initializing /data/converted/miso/Aufnahme-184058-0002.tif: [testng] [2024-11-28 05:57:57,688] [pool-1-thread-11] Initializing /data/converted/markus/HeLa-Reggie-GFP_ZT_fast-DCV-CI-measured-PSF.tif: [testng] [2024-11-28 06:00:07,849] [pool-1-thread-3] Initializing /data/converted/othmar/mozaic.tif: [testng] [2024-11-28 06:00:15,596] [pool-1-thread-9] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_14.tif: [testng] [2024-11-28 06:02:29,098] [pool-1-thread-1] Initializing /data/converted/cecilia/day 1 naked nb positive 1-2007-0055.tif: [testng] [2024-11-28 06:02:49,708] [pool-1-thread-5] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_17.tif: [testng] [2024-11-28 06:03:25,848] [pool-1-thread-1] Initializing /data/converted/stephan/notok1.tif: [testng] [2024-11-28 06:03:31,239] [pool-1-thread-12] Initializing /data/converted/stephan/notok2.tif: [testng] [2024-11-28 06:03:57,495] [pool-1-thread-8] Initializing /data/converted/converted/wtzer_series76_z003_ch00-with-rois.tif: [testng] [2024-11-28 06:04:33,866] [pool-1-thread-8] Initializing /data/converted/susan/BY4741NQ2.tif: [testng] 06:04:37,225 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 06:04:37,226 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 06:04:37,227 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-11-28_06-04-37.log] [testng] 06:04:37,227 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2c4d768e - End of configuration. [testng] [2024-11-28 06:05:25,232] [pool-1-thread-8] Initializing /data/converted/markus/Material_color_image_HRc_microscanned_4x3K.tif: [testng] [2024-11-28 06:05:56,135] [pool-1-thread-3] Initializing /data/converted/othmar/z-stack.tif: [testng] [2024-11-28 06:06:04,383] [pool-1-thread-8] Initializing /data/converted/michel/e.tif: [testng] [2024-11-28 06:06:20,565] [pool-1-thread-1] Initializing /data/converted/dietmar/138.tif: [testng] [2024-11-28 06:06:28,584] [pool-1-thread-12] Initializing /data/converted/shalin/ibidiuslide1-timelapse3_mid2.tif: [testng] 07:03:57,173 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 07:03:57,173 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 07:03:57,174 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-11-28_07-03-57.log] [testng] 07:03:57,175 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1dbd9376 - End of configuration. [testng] 07:07:09,451 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 07:07:09,451 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 07:07:09,452 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-11-28_07-07-09.log] [testng] 07:07:09,452 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3310bb28 - End of configuration. [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 6625, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 162 minutes 27 seconds Finished: SUCCESS