Started by upstream project "BIOFORMATS-test-repo" build number 272
originally caused by:
Started by upstream project "Trigger" build number 294
originally caused by:
Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@5
[BIOFORMATS-test-folder@5] $ /bin/bash -xe /tmp/jenkins9347060091635287970.sh
+ '[' gatan = slidebook ']'
++ date +%u
+ '[' 5 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_42798_merge_ci -v /uod/idr/repos/curated/gatan:/data -v /uod/idr-scratch/merge-ci/curated/gatan:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
[echo] isSnapshot = true
init-title:
[echo] ----------=========== bio-formats-testing-framework ===========----------
init-timestamp:
init:
copy-resources:
compile:
[resolver:resolve] Resolving artifacts
compile-tests:
[resolver:resolve] Resolving artifacts
[javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
test-automated:
[testng] File leak detector installed
[testng] 00:21:50,439 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
[testng] 00:21:50,441 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - No custom configurators were discovered as a service.
[testng] 00:21:50,441 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 00:21:50,442 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 00:21:50,442 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
[testng] 00:21:50,442 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
[testng] 00:21:50,442 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 0 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
[testng] 00:21:50,442 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 00:21:50,443 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 00:21:50,443 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
[testng] 00:21:50,443 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
[testng] 00:21:50,443 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
[testng] 00:21:50,668 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
[testng] 00:21:50,668 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
[testng] 00:21:50,697 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
[testng] 00:21:50,697 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
[testng] 00:21:50,705 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
[testng] 00:21:50,705 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
[testng] 00:21:50,705 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
[testng] 00:21:50,705 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
[testng] 00:21:50,706 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@7a69b07 - End of configuration.
[testng] 00:21:50,706 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@636be97c - Registering current configuration as safe fallback point
[testng] 00:21:50,707 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 264 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
[testng] [2024-11-29 00:21:50,717] [main] java.version = 1.8.0_342
[testng] 00:21:50,720 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
[testng] 00:21:50,721 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:21:50,767 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-11-29_00-21-50.log]
[testng] 00:21:50,768 |-INFO in ch.qos.logback.core.sift.SiftProcessor@13c9d689 - End of configuration.
[testng] [2024-11-29 00:21:50,770] [main] testng.directory = /data
[testng] [2024-11-29 00:21:50,770] [main] testng.configDirectory = /config
[testng] [2024-11-29 00:21:50,783] [main] testng.multiplier = 1.0
[testng] [2024-11-29 00:21:50,783] [main] testng.in-memory = false
[testng] [2024-11-29 00:21:50,783] [main] testng.allow-missing = false
[testng] [2024-11-29 00:21:50,783] [main] user.language = en
[testng] [2024-11-29 00:21:50,783] [main] user.country = ${user.country}
[testng] [2024-11-29 00:21:50,783] [main] Maximum heap size = 13653 MB
[testng] Scanning for files...
[testng] [2024-11-29 00:21:53,254] [main] ----------------------------------------
[testng] [2024-11-29 00:21:53,255] [main] Total files: 103
[testng] [2024-11-29 00:21:53,255] [main] Scan time: 2.471 s (23 ms/file)
[testng] [2024-11-29 00:21:53,255] [main] ----------------------------------------
[testng] Building list of tests...
[testng] Ready to test 98 files
[testng] [TestNG] Running:
[testng] Bio-Formats software test suite
[testng]
[testng] [2024-11-29 00:22:05,244] [pool-1-thread-1] Initializing /data/public/imagesc-36590/SmallMontage0005.dm4:
[testng] 00:22:05,245 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
[testng] 00:22:05,245 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:22:05,246 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-11-29_00-22-05.log]
[testng] 00:22:05,246 |-INFO in ch.qos.logback.core.sift.SiftProcessor@35e0efc2 - End of configuration.
[testng] [2024-11-29 00:22:05,314] [pool-1-thread-12] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0019.dm4:
[testng] 00:22:05,314 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
[testng] 00:22:05,315 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:22:05,315 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-11-29_00-22-05.log]
[testng] 00:22:05,316 |-INFO in ch.qos.logback.core.sift.SiftProcessor@12931fe4 - End of configuration.
[testng] [2024-11-29 00:22:05,362] [pool-1-thread-11] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0003.dm4:
[testng] 00:22:05,362 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
[testng] 00:22:05,363 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:22:05,363 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-11-29_00-22-05.log]
[testng] 00:22:05,364 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3356a668 - End of configuration.
[testng] [2024-11-29 00:22:05,422] [pool-1-thread-10] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-128x128.tif:
[testng] 00:22:05,423 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
[testng] 00:22:05,423 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:22:05,423 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-11-29_00-22-05.log]
[testng] 00:22:05,424 |-INFO in ch.qos.logback.core.sift.SiftProcessor@42e16526 - End of configuration.
[testng] [2024-11-29 00:22:05,680] [pool-1-thread-9] Initializing /data/qa-11392/Example_Gatan_File.dm4:
[testng] 00:22:05,680 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
[testng] 00:22:05,680 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:22:05,681 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-11-29_00-22-05.log]
[testng] 00:22:05,681 |-INFO in ch.qos.logback.core.sift.SiftProcessor@c75831 - End of configuration.
[testng] [2024-11-29 00:22:05,721] [pool-1-thread-8] Initializing /data/sindhu/cropped/JC76-G1-80000.0V-15000X-Sindhu-362-1020x1020.tif:
[testng] 00:22:05,721 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
[testng] 00:22:05,721 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:22:05,722 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-11-29_00-22-05.log]
[testng] 00:22:05,722 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3b0b3635 - End of configuration.
[testng] [2024-11-29 00:22:06,095] [pool-1-thread-7] Initializing /data/qa-8007/Prefix_3VBSED_slice_0011.dm3:
[testng] 00:22:06,095 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
[testng] 00:22:06,095 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:22:06,095 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-11-29_00-22-06.log]
[testng] 00:22:06,096 |-INFO in ch.qos.logback.core.sift.SiftProcessor@40e5e67f - End of configuration.
[testng] [2024-11-29 00:22:06,127] [pool-1-thread-6] Initializing /data/thorsten/60kx_HAADF_03.dm3:
[testng] 00:22:06,127 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
[testng] 00:22:06,127 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:22:06,128 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-11-29_00-22-06.log]
[testng] 00:22:06,128 |-INFO in ch.qos.logback.core.sift.SiftProcessor@61832287 - End of configuration.
[testng] [2024-11-29 00:22:06,166] [pool-1-thread-5] Initializing /data/jay/Carbon.34.dm3:
[testng] 00:22:06,166 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
[testng] 00:22:06,166 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:22:06,167 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-11-29_00-22-06.log]
[testng] 00:22:06,167 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5bb447ae - End of configuration.
[testng] [2024-11-29 00:22:06,235] [pool-1-thread-4] Initializing /data/jay/dnasample1.dm3:
[testng] 00:22:06,236 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
[testng] 00:22:06,236 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:22:06,237 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-11-29_00-22-06.log]
[testng] 00:22:06,237 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7a8bdac1 - End of configuration.
[testng] [2024-11-29 00:22:06,283] [pool-1-thread-3] Initializing /data/jay/camtest1.dm3:
[testng] 00:22:06,283 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
[testng] 00:22:06,283 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:22:06,284 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-11-29_00-22-06.log]
[testng] 00:22:06,284 |-INFO in ch.qos.logback.core.sift.SiftProcessor@69b8045a - End of configuration.
[testng] [2024-11-29 00:22:06,427] [pool-1-thread-2] Initializing /data/jay/ViewDMtest.dm3:
[testng] 00:22:06,428 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
[testng] 00:22:06,428 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:22:06,428 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-11-29_00-22-06.log]
[testng] 00:22:06,429 |-INFO in ch.qos.logback.core.sift.SiftProcessor@47b6ac6c - End of configuration.
[testng] [2024-11-29 00:22:08,448] [pool-1-thread-1] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0052.dm4:
[testng] [2024-11-29 00:22:08,911] [pool-1-thread-6] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0018.dm4:
[testng] [2024-11-29 00:22:09,188] [pool-1-thread-7] Initializing /data/jay/biosamplefullframe.dm3:
[testng] [2024-11-29 00:22:10,219] [pool-1-thread-11] Initializing /data/qa-21652/E coli phage H2O_100000.0V_67000X.tif:
[testng] [2024-11-29 00:22:10,573] [pool-1-thread-12] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0009.dm4:
[testng] [2024-11-29 00:22:10,635] [pool-1-thread-10] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-360.dm3:
[testng] [2024-11-29 00:22:11,228] [pool-1-thread-8] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0053.dm4:
[testng] [2024-11-29 00:22:11,280] [pool-1-thread-4] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-364.dm3:
[testng] [2024-11-29 00:22:11,414] [pool-1-thread-5] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-362.tif:
[testng] [2024-11-29 00:22:11,860] [pool-1-thread-2] Initializing /data/melissa/annotation-test.dm3:
[testng] [2024-11-29 00:22:11,973] [pool-1-thread-3] Initializing /data/ofra/Co on INT 28-12-10.11.dm3:
[testng] [2024-11-29 00:22:12,305] [pool-1-thread-6] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-363.dm3:
[testng] [2024-11-29 00:22:13,018] [pool-1-thread-9] Initializing /data/ofra/lowloss.dm3:
[testng] [2024-11-29 00:22:14,480] [pool-1-thread-12] Initializing /data/imagesc-3719/Heart_BSE_slice_0019.dm4:
[testng] [2024-11-29 00:22:14,634] [pool-1-thread-2] Initializing /data/jay/samples/APC2a-e5.dm3:
[testng] [2024-11-29 00:22:14,725] [pool-1-thread-7] Initializing /data/jay/samples/APC2a-e3.dm3:
[testng] [2024-11-29 00:22:14,794] [pool-1-thread-3] Initializing /data/public/imagesc-36590/SmallMontage0007.dm4:
[testng] [2024-11-29 00:22:15,249] [pool-1-thread-9] Initializing /data/jay/DMtest2.dm3:
[testng] [2024-11-29 00:22:16,218] [pool-1-thread-3] Initializing /data/imagesc-3719/Prefix_BSE_slice_0001.dm4:
[testng] [2024-11-29 00:22:16,295] [pool-1-thread-11] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0005.dm4:
[testng] [2024-11-29 00:22:16,529] [pool-1-thread-10] Initializing /data/public/imagesc-36590/SmallMontage0003.dm4:
[testng] [2024-11-29 00:22:16,885] [pool-1-thread-7] Initializing /data/qa-7642/8.dm4:
[testng] [2024-11-29 00:22:17,241] [pool-1-thread-2] Initializing /data/public/EMPIAR/EMPIAR-10013/BGal_000438_frames.dm4:
[testng] [2024-11-29 00:22:17,513] [pool-1-thread-4] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-96x96.tif:
[testng] [2024-11-29 00:22:18,258] [pool-1-thread-10] Initializing /data/melissa/annotation-test.tif:
[testng] [2024-11-29 00:22:19,057] [pool-1-thread-6] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0001.dm4:
[testng] [2024-11-29 00:22:19,487] [pool-1-thread-7] Initializing /data/qa-21761/example.dm4:
[testng] [2024-11-29 00:22:19,739] [pool-1-thread-12] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0046.dm4:
[testng] [2024-11-29 00:22:19,958] [pool-1-thread-11] Initializing /data/jay/recAmaghi.dm3:
[testng] [2024-11-29 00:22:20,210] [pool-1-thread-9] Initializing /data/jay/samples/APC2a-e3.tif:
[testng] [2024-11-29 00:22:21,175] [pool-1-thread-5] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0048.dm4:
[testng] [2024-11-29 00:22:21,740] [pool-1-thread-6] Initializing /data/jayne/AM-2/MonGb2-S8.dm3:
[testng] [2024-11-29 00:22:21,832] [pool-1-thread-7] Initializing /data/samples/mode-metadata/mode_format_test.dm3:
[testng] [2024-11-29 00:22:22,891] [pool-1-thread-4] Initializing /data/public/imagesc-36590/SmallMontage0008.dm4:
[testng] [2024-11-29 00:22:22,982] [pool-1-thread-2] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-256x256.tif:
[testng] [2024-11-29 00:22:23,272] [pool-1-thread-10] Initializing /data/qa-21647/Sample2_L1-0002.dm4:
[testng] [2024-11-29 00:22:24,116] [pool-1-thread-4] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0015.dm4:
[testng] [2024-11-29 00:22:24,512] [pool-1-thread-10] Initializing /data/public/imagesc-36590/SmallMontage0004.dm4:
[testng] [2024-11-29 00:22:25,365] [pool-1-thread-9] Initializing /data/public/imagesc-36590/SmallMontage0006.dm4:
[testng] [2024-11-29 00:22:25,548] [pool-1-thread-11] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-364.tif:
[testng] [2024-11-29 00:22:25,944] [pool-1-thread-10] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0016.dm4:
[testng] [2024-11-29 00:22:26,165] [pool-1-thread-2] Initializing /data/nuno/Prefix_3VBSED_stack_30_slice_0290.dm3:
[testng] [2024-11-29 00:22:26,787] [pool-1-thread-9] Initializing /data/chip/Nanogold-1.dm3:
[testng] [2024-11-29 00:22:26,933] [pool-1-thread-6] Initializing /data/jay/smallerfile.dm3:
[testng] [2024-11-29 00:22:27,083] [pool-1-thread-4] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0012.dm4:
[testng] [2024-11-29 00:22:27,257] [pool-1-thread-7] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0008.dm4:
[testng] [2024-11-29 00:22:27,879] [pool-1-thread-1] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-26000X-Sindhu-364.tif:
[testng] [2024-11-29 00:22:28,442] [pool-1-thread-6] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0047.dm4:
[testng] [2024-11-29 00:22:28,626] [pool-1-thread-10] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-362-smaller.tif:
[testng] [2024-11-29 00:22:29,265] [pool-1-thread-4] Initializing /data/public/imagesc-36590/SmallMontage0002.dm4:
[testng] [2024-11-29 00:22:29,872] [pool-1-thread-9] Initializing /data/public/imagesc-36590/SmallMontage0001.dm4:
[testng] [2024-11-29 00:22:30,037] [pool-1-thread-7] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-360.tif:
[testng] [2024-11-29 00:22:30,611] [pool-1-thread-8] Initializing /data/jay/samples/APC2a-e4.dm3:
[testng] [2024-11-29 00:22:30,994] [pool-1-thread-4] Initializing /data/samples/test-tiles.dm3:
[testng] [2024-11-29 00:22:31,069] [pool-1-thread-9] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0011.dm4:
[testng] [2024-11-29 00:22:31,851] [pool-1-thread-4] Initializing /data/jayne/AM-2/MonGb3-S3.dm3:
[testng] [2024-11-29 00:22:32,016] [pool-1-thread-8] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-360.tif:
[testng] [2024-11-29 00:22:32,750] [pool-1-thread-3] Initializing /data/jay/samples/APC2a-e5.tif:
[testng] [2024-11-29 00:22:33,213] [pool-1-thread-10] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0045.dm4:
[testng] [2024-11-29 00:22:33,495] [pool-1-thread-9] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0000.dm4:
[testng] [2024-11-29 00:22:33,582] [pool-1-thread-11] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0050.dm4:
[testng] [2024-11-29 00:22:35,117] [pool-1-thread-2] Initializing /data/jay/biosamplefullframetif.tif:
[testng] [2024-11-29 00:22:35,470] [pool-1-thread-1] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0013.dm4:
[testng] [2024-11-29 00:22:36,275] [pool-1-thread-4] Initializing /data/nuno/Prefix_3VBSED_slice_0011.dm3:
[testng] [2024-11-29 00:22:36,335] [pool-1-thread-9] Initializing /data/qa-21652/E coli phage H2O_100000.0V_67000X.dm4:
[testng] [2024-11-29 00:22:37,307] [pool-1-thread-7] Initializing /data/jay/recAmag6500dm.dm3:
[testng] [2024-11-29 00:22:37,550] [pool-1-thread-9] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0014.dm4:
[testng] [2024-11-29 00:22:37,606] [pool-1-thread-3] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0017.dm4:
[testng] [2024-11-29 00:22:38,062] [pool-1-thread-4] Initializing /data/public/imagesc-36590/SmallMontage0000.dm4:
[testng] [2024-11-29 00:22:38,195] [pool-1-thread-1] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-362.tif:
[testng] [2024-11-29 00:22:39,559] [pool-1-thread-12] Initializing /data/jayne/AM-2/MonGb2-S9.dm3:
[testng] [2024-11-29 00:22:40,064] [pool-1-thread-5] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0004.dm4:
[testng] [2024-11-29 00:22:40,794] [pool-1-thread-4] Initializing /data/jay/DMtest.dm3:
[testng] [2024-11-29 00:22:41,213] [pool-1-thread-9] Initializing /data/jayne/AM-2/MonGb2-S7.dm3:
[testng] [2024-11-29 00:22:41,591] [pool-1-thread-3] Initializing /data/jayne/AM-2/MonGb3-S1.dm3:
[testng] [2024-11-29 00:22:42,670] [pool-1-thread-7] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0049.dm4:
[testng] [2024-11-29 00:22:42,798] [pool-1-thread-8] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0010.dm4:
[testng] [2024-11-29 00:22:43,187] [pool-1-thread-2] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0007.dm4:
[testng] [2024-11-29 00:22:43,331] [pool-1-thread-5] Initializing /data/jay/dnasample.tif:
[testng] [2024-11-29 00:22:45,225] [pool-1-thread-12] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-480x480.tif:
[testng] [2024-11-29 00:22:46,549] [pool-1-thread-6] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0051.dm4:
[testng] [2024-11-29 00:22:46,991] [pool-1-thread-4] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0006.dm4:
[testng] [2024-11-29 00:22:47,151] [pool-1-thread-3] Initializing /data/jay/samples/APC2a-e4.tif:
[testng] [2024-11-29 00:22:47,982] [pool-1-thread-9] Initializing /data/sindhu/cropped/JC76-G1-80000.0V-15000X-Sindhu-362-799x799.tif:
[testng] [2024-11-29 00:22:49,598] [pool-1-thread-8] Initializing /data/jay/graphitedm3.dm3:
[testng] [2024-11-29 00:22:50,091] [pool-1-thread-2] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0002.dm4:
[testng]
[testng] ===============================================
[testng] Bio-Formats software test suite
[testng] Total tests run: 5194, Failures: 0, Skips: 0
[testng] ===============================================
[testng]
BUILD SUCCESSFUL
Total time: 1 minute 19 seconds
Finished: SUCCESS