Started by upstream project "BIOFORMATS-test-repo" build number 272
originally caused by:
Started by upstream project "Trigger" build number 294
originally caused by:
Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@3
[BIOFORMATS-test-folder@3] $ /bin/bash -xe /tmp/jenkins14014555996354016093.sh
+ '[' fv1000 = slidebook ']'
++ date +%u
+ '[' 5 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_42837_merge_ci -v /uod/idr/repos/curated/fv1000:/data -v /uod/idr-scratch/merge-ci/curated/fv1000:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
[echo] isSnapshot = true
init-title:
[echo] ----------=========== bio-formats-testing-framework ===========----------
init-timestamp:
init:
copy-resources:
compile:
[resolver:resolve] Resolving artifacts
compile-tests:
[resolver:resolve] Resolving artifacts
[javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
test-automated:
[testng] File leak detector installed
[testng] 00:44:14,562 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
[testng] 00:44:14,564 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - No custom configurators were discovered as a service.
[testng] 00:44:14,564 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 00:44:14,566 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 00:44:14,566 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
[testng] 00:44:14,566 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
[testng] 00:44:14,567 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
[testng] 00:44:14,567 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 00:44:14,567 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 00:44:14,568 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
[testng] 00:44:14,568 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
[testng] 00:44:14,568 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
[testng] 00:44:14,805 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
[testng] 00:44:14,805 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
[testng] 00:44:14,836 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
[testng] 00:44:14,836 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
[testng] 00:44:14,844 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
[testng] 00:44:14,844 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
[testng] 00:44:14,844 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
[testng] 00:44:14,844 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
[testng] 00:44:14,844 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@7a69b07 - End of configuration.
[testng] 00:44:14,845 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@636be97c - Registering current configuration as safe fallback point
[testng] 00:44:14,845 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 278 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
[testng] [2024-11-29 00:44:14,855] [main] java.version = 1.8.0_342
[testng] 00:44:14,858 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
[testng] 00:44:14,859 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:44:14,908 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-11-29_00-44-14.log]
[testng] 00:44:14,910 |-INFO in ch.qos.logback.core.sift.SiftProcessor@13c9d689 - End of configuration.
[testng] [2024-11-29 00:44:14,912] [main] testng.directory = /data
[testng] [2024-11-29 00:44:14,912] [main] testng.configDirectory = /config
[testng] [2024-11-29 00:44:14,929] [main] testng.multiplier = 1.0
[testng] [2024-11-29 00:44:14,929] [main] testng.in-memory = false
[testng] [2024-11-29 00:44:14,929] [main] testng.allow-missing = false
[testng] [2024-11-29 00:44:14,929] [main] user.language = en
[testng] [2024-11-29 00:44:14,929] [main] user.country = ${user.country}
[testng] [2024-11-29 00:44:14,929] [main] Maximum heap size = 13653 MB
[testng] Scanning for files...
[testng] [2024-11-29 00:44:40,482] [main] ----------------------------------------
[testng] [2024-11-29 00:44:40,482] [main] Total files: 259
[testng] [2024-11-29 00:44:40,482] [main] Scan time: 25.553 s (98 ms/file)
[testng] [2024-11-29 00:44:40,483] [main] ----------------------------------------
[testng] Building list of tests...
[testng] Ready to test 144 files
[testng] [TestNG] Running:
[testng] Bio-Formats software test suite
[testng]
[testng] [2024-11-29 00:50:29,555] [pool-1-thread-1] Initializing /data/kashif/OIF_V1/Sample_XYZ.oif:
[testng] 00:50:29,556 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
[testng] 00:50:29,556 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:50:29,557 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-11-29_00-50-29.log]
[testng] 00:50:29,557 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3077671e - End of configuration.
[testng] [2024-11-29 00:50:30,414] [pool-1-thread-12] Initializing /data/shane/Data Subset/EX5-10 fresh plan.oib:
[testng] 00:50:30,414 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
[testng] 00:50:30,414 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:50:30,415 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-11-29_00-50-30.log]
[testng] 00:50:30,415 |-INFO in ch.qos.logback.core.sift.SiftProcessor@53278f75 - End of configuration.
[testng] [2024-11-29 00:50:30,645] [pool-1-thread-11] Initializing /data/aryeh/naomi/Brain 2 he1d 1.oif:
[testng] 00:50:30,646 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
[testng] 00:50:30,646 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:50:30,646 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-11-29_00-50-30.log]
[testng] 00:50:30,647 |-INFO in ch.qos.logback.core.sift.SiftProcessor@29faed0a - End of configuration.
[testng] [2024-11-29 00:50:32,824] [pool-1-thread-10] Initializing /data/aryeh/061010 plate 1/Image0002_06.oib:
[testng] 00:50:32,824 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
[testng] 00:50:32,824 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:50:32,825 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-11-29_00-50-32.log]
[testng] 00:50:32,826 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1842b769 - End of configuration.
[testng] [2024-11-29 00:50:33,349] [pool-1-thread-9] Initializing /data/pedro/plv-test.oib:
[testng] 00:50:33,349 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
[testng] 00:50:33,349 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:50:33,350 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-11-29_00-50-33.log]
[testng] 00:50:33,350 |-INFO in ch.qos.logback.core.sift.SiftProcessor@14a624 - End of configuration.
[testng] [2024-11-29 00:50:33,631] [pool-1-thread-8] Initializing /data/jcb/200909024/Sup Fig 2/2.oib:
[testng] 00:50:33,631 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
[testng] 00:50:33,631 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:50:33,631 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-11-29_00-50-33.log]
[testng] 00:50:33,632 |-INFO in ch.qos.logback.core.sift.SiftProcessor@30706035 - End of configuration.
[testng] [2024-11-29 00:50:33,898] [pool-1-thread-7] Initializing /data/molly/11OCT4.OIF:
[testng] 00:50:33,898 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
[testng] 00:50:33,898 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:50:33,899 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-11-29_00-50-33.log]
[testng] 00:50:33,899 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2a0a06f3 - End of configuration.
[testng] [2024-11-29 00:50:38,037] [pool-1-thread-6] Initializing /data/brian/CagedATP CaG+FuraR3_a.oib:
[testng] 00:50:38,037 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
[testng] 00:50:38,037 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:50:38,038 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-11-29_00-50-38.log]
[testng] 00:50:38,038 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1e648647 - End of configuration.
[testng] [2024-11-29 00:50:38,315] [pool-1-thread-5] Initializing /data/shane/Data Subset/NESTIN_control2.oif:
[testng] 00:50:38,315 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
[testng] 00:50:38,315 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:50:38,316 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-11-29_00-50-38.log]
[testng] 00:50:38,316 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5c1abe9b - End of configuration.
[testng] [2024-11-29 00:50:38,595] [pool-1-thread-4] Initializing /data/molly/11OCT5.OIF:
[testng] 00:50:38,595 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
[testng] 00:50:38,595 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:50:38,595 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-11-29_00-50-38.log]
[testng] 00:50:38,596 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2845ae4a - End of configuration.
[testng] [2024-11-29 00:50:42,421] [pool-1-thread-3] Initializing /data/glen/Null file/test no change.oif:
[testng] 00:50:42,421 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
[testng] 00:50:42,421 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:50:42,422 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-11-29_00-50-42.log]
[testng] 00:50:42,423 |-INFO in ch.qos.logback.core.sift.SiftProcessor@45883a6f - End of configuration.
[testng] [2024-11-29 00:50:42,762] [pool-1-thread-2] Initializing /data/sten/01.oib:
[testng] 00:50:42,762 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
[testng] 00:50:42,762 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:50:42,763 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-11-29_00-50-42.log]
[testng] 00:50:42,763 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2cd8b00b - End of configuration.
[testng] [2024-11-29 00:50:47,436] [pool-1-thread-12] Initializing /data/johannes/Image0006/Image0006.oif.files/Image0006_Thumb.bmp:
[testng] [2024-11-29 00:50:47,512] [pool-1-thread-9] Initializing /data/shane/Data Subset/MHC1_control.oif:
[testng] [2024-11-29 00:50:48,007] [pool-1-thread-2] Initializing /data/kashif/OIF_V2/Sample_XYZ.oif:
[testng] [2024-11-29 00:50:49,435] [pool-1-thread-8] Initializing /data/glen/seqlinestack.oif:
[testng] [2024-11-29 00:50:52,704] [pool-1-thread-6] Initializing /data/brian/CagedATP CaG7a.oib:
[testng] [2024-11-29 00:50:53,605] [pool-1-thread-10] Initializing /data/johannes/step5b.bmp:
[testng] [2024-11-29 00:50:54,228] [pool-1-thread-12] Initializing /data/michael/CELL3.oib:
[testng] [2024-11-29 00:50:55,649] [pool-1-thread-10] Initializing /data/brian/Lambda10nm.oib:
[testng] [2024-11-29 00:50:56,712] [pool-1-thread-6] Initializing /data/aryeh/061010 plate 1/Image0002_02.oib:
[testng] [2024-11-29 00:50:58,064] [pool-1-thread-12] Initializing /data/brian/PA-GFPv-2.oib:
[testng] [2024-11-29 00:51:00,127] [pool-1-thread-10] Initializing /data/molly/11OCT3.OIF:
[testng] [2024-11-29 00:51:37,941] [pool-1-thread-6] Initializing /data/glen/simulstack.oib:
[testng] [2024-11-29 00:51:38,730] [pool-1-thread-12] Initializing /data/molly/11OCT6.OIF:
[testng] [2024-11-29 00:51:49,307] [pool-1-thread-5] Initializing /data/shane/Data Subset/EXX4-10G40%.oib:
[testng] [2024-11-29 00:51:49,965] [pool-1-thread-3] Initializing /data/brian/Kaede-Neuron-9XYZ.oib:
[testng] [2024-11-29 00:51:52,514] [pool-1-thread-9] Initializing /data/glen/singleseqline.oib:
[testng] [2024-11-29 00:51:53,184] [pool-1-thread-5] Initializing /data/aryeh/PIP2 ESCV Z 1 after.oib:
[testng] [2024-11-29 00:51:54,065] [pool-1-thread-6] Initializing /data/monica/Image0056.oif:
[testng] [2024-11-29 00:51:55,400] [pool-1-thread-3] Initializing /data/barbara/Image_with_working_import.oib:
[testng] [2024-11-29 00:51:57,001] [pool-1-thread-9] Initializing /data/francesco/fGfp.c15.oib:
[testng] [2024-11-29 00:51:59,022] [pool-1-thread-3] Initializing /data/daniel/M1(0 0 146)-r1-drift8_3-6-3s_4Hz_0.006cpp_fillfact-0.25-0.488mspl-3x.oib:
[testng] [2024-11-29 00:52:03,966] [pool-1-thread-9] Initializing /data/brian/PA-GFP-3.oib:
[testng] [2024-11-29 00:52:04,655] [pool-1-thread-5] Initializing /data/aryeh/061010 plate 1/Image0002_05.oib:
[testng] [2024-11-29 00:52:09,677] [pool-1-thread-9] Initializing /data/glen/111407.oif:
[testng] [2024-11-29 00:52:12,181] [pool-1-thread-5] Initializing /data/glen/ticket-10092/tbn 02-10-12 D7 DT 8300 1.oif:
[testng] [2024-11-29 00:52:31,373] [pool-1-thread-3] Initializing /data/glen/singleseqframe.oif:
[testng] [2024-11-29 00:52:34,017] [pool-1-thread-6] Initializing /data/glen/notsaturated.oif:
[testng] [2024-11-29 00:53:02,971] [pool-1-thread-3] Initializing /data/dan/outerEV1solu6new.oib:
[testng] [2024-11-29 00:53:07,748] [pool-1-thread-3] Initializing /data/brian/CFP-GFP2.oib:
[testng] [2024-11-29 00:53:11,029] [pool-1-thread-3] Initializing /data/shane/Data Subset/EXX7-10G30% .oib:
[testng] [2024-11-29 00:53:14,143] [pool-1-thread-3] Initializing /data/glen/Image0002.oif:
[testng] [2024-11-29 00:56:05,067] [pool-1-thread-2] Initializing /data/glen/singleseqframe.oib:
[testng] [2024-11-29 00:56:08,593] [pool-1-thread-2] Initializing /data/jcb/200909024/Sup Fig 2/4.oib:
[testng] [2024-11-29 00:56:12,593] [pool-1-thread-2] Initializing /data/johannes/Image0016/Image0016.oif:
[testng] [2024-11-29 00:57:08,742] [pool-1-thread-1] Initializing /data/brian/CagedATP CaG7.oib:
[testng] [2024-11-29 00:57:12,950] [pool-1-thread-1] Initializing /data/marc/V0606J.oib:
[testng] [2024-11-29 00:57:29,248] [pool-1-thread-1] Initializing /data/glen/LUT issue/Greenredfarred.oif:
[testng] [2024-11-29 00:57:45,643] [pool-1-thread-6] Initializing /data/johannes/Image0010/Image0010.oif.files/Image0010_Thumb.bmp:
[testng] [2024-11-29 00:57:47,524] [pool-1-thread-6] Initializing /data/tom/zseries-test.oib:
[testng] [2024-11-29 00:57:55,456] [pool-1-thread-6] Initializing /data/glen/15min 200neo lyso SO1.oib:
[testng] [2024-11-29 00:58:01,652] [pool-1-thread-6] Initializing /data/yasunori/series_1.oib:
[testng] [2024-11-29 00:58:08,237] [pool-1-thread-6] Initializing /data/aryeh/061010 plate 1/Image0002_07.oib:
[testng] [2024-11-29 00:58:15,625] [pool-1-thread-6] Initializing /data/aryeh/061010 plate 1/Image0002_09.oib:
[testng] [2024-11-29 00:58:20,198] [pool-1-thread-1] Initializing /data/johannes/step2.bmp:
[testng] [2024-11-29 00:58:22,761] [pool-1-thread-1] Initializing /data/shane/Data Subset/EXX6-10G30%.oib:
[testng] [2024-11-29 00:58:23,438] [pool-1-thread-6] Initializing /data/johannes/Image0010/Image0010.oif:
[testng] [2024-11-29 00:58:29,131] [pool-1-thread-1] Initializing /data/paul/Day 4 1 FBS flat - cell 6 - green.oib:
[testng] [2024-11-29 00:58:34,392] [pool-1-thread-1] Initializing /data/johannes/Image0006/Image0006.oif:
[testng] [2024-11-29 00:59:45,867] [pool-1-thread-2] Initializing /data/aryeh/030408 2 1.oib:
[testng] [2024-11-29 00:59:51,423] [pool-1-thread-2] Initializing /data/david/Image0016.oif:
[testng] [2024-11-29 01:01:14,799] [pool-1-thread-2] Initializing /data/molly/11OCT2.OIF:
[testng] [2024-11-29 01:01:41,158] [pool-1-thread-6] Initializing /data/ramon/Image_01_01_01_01.oif:
[testng] [2024-11-29 01:01:47,788] [pool-1-thread-1] Initializing /data/aryeh/1h_after_pdt.oib:
[testng] [2024-11-29 01:02:10,774] [pool-1-thread-1] Initializing /data/shane/Data Subset/Ex3sol.oif:
[testng] [2024-11-29 01:02:42,238] [pool-1-thread-1] Initializing /data/lavinia/NM1-RibA-RibB-side.oib:
[testng] [2024-11-29 01:02:47,062] [pool-1-thread-1] Initializing /data/brian/lambda02nm.oib:
[testng] [2024-11-29 01:02:51,926] [pool-1-thread-1] Initializing /data/glen/QuitIJ/06-1728brnc3my.oib:
[testng] [2024-11-29 01:02:57,976] [pool-1-thread-1] Initializing /data/karl/Image0009.oib:
[testng] [2024-11-29 01:03:01,968] [pool-1-thread-1] Initializing /data/molly/13SH2bUTRtime4b.oib:
[testng] [2024-11-29 01:03:07,895] [pool-1-thread-1] Initializing /data/glen/4205basal106072.oif:
[testng] [2024-11-29 01:03:27,038] [pool-1-thread-9] Initializing /data/stefan/YC2_spectrum-405.oib:
[testng] [2024-11-29 01:03:30,970] [pool-1-thread-9] Initializing /data/glen/seqlinestack.oib:
[testng] [2024-11-29 01:03:36,213] [pool-1-thread-9] Initializing /data/glen/singlesimul.oib:
[testng] [2024-11-29 01:03:39,884] [pool-1-thread-9] Initializing /data/molly/11OCT9.OIF:
[testng] [2024-11-29 01:04:08,792] [pool-1-thread-6] Initializing /data/aryeh/1h.oib:
[testng] [2024-11-29 01:04:16,836] [pool-1-thread-6] Initializing /data/brian/Al488-yoyo1-2.oib:
[testng] [2024-11-29 01:04:21,721] [pool-1-thread-6] Initializing /data/aryeh/061010 plate 1/Image0002_01.oib:
[testng] [2024-11-29 01:04:27,842] [pool-1-thread-6] Initializing /data/glen/notsaturated.oib:
[testng] [2024-11-29 01:04:35,495] [pool-1-thread-6] Initializing /data/brian/FLIP.oib:
[testng] [2024-11-29 01:04:41,878] [pool-1-thread-6] Initializing /data/allan/new_30min3_1z2.oib:
[testng] [2024-11-29 01:04:48,205] [pool-1-thread-6] Initializing /data/dan/EGFR-GFP_ptyr-555 FRET test.oib:
[testng] [2024-11-29 01:04:52,177] [pool-1-thread-6] Initializing /data/simon/never_worked.oib:
[testng] [2024-11-29 01:04:56,541] [pool-1-thread-6] Initializing /data/johannes/step1.bmp:
[testng] [2024-11-29 01:04:58,768] [pool-1-thread-6] Initializing /data/aryeh/naomi/Brain 2 he1d 1.oib:
[testng] [2024-11-29 01:05:03,985] [pool-1-thread-6] Initializing /data/kay/IM2pg.oib:
[testng] [2024-11-29 01:05:10,779] [pool-1-thread-6] Initializing /data/stefan/cytosol_03e.oib:
[testng] [2024-11-29 01:05:17,600] [pool-1-thread-6] Initializing /data/molly/11OCT8.OIF:
[testng] [2024-11-29 01:05:25,443] [pool-1-thread-7] Initializing /data/brian/CagedATP CaG+FuraR3.oib:
[testng] [2024-11-29 01:05:28,903] [pool-1-thread-7] Initializing /data/public/imagesc-71616/20220824_4492_cord_dapi__iba568_60x.oib:
[testng] [2024-11-29 01:05:32,869] [pool-1-thread-7] Initializing /data/lavinia/NM1-RibB-NeuroD-uninjected.oib:
[testng] [2024-11-29 01:05:34,771] [pool-1-thread-4] Initializing /data/qa-17748/Image0079.oib:
[testng] [2024-11-29 01:05:37,579] [pool-1-thread-7] Initializing /data/glen/singleseqline.oif:
[testng] [2024-11-29 01:05:38,602] [pool-1-thread-4] Initializing /data/bojana/XYT_FirstBolus.oib:
[testng] [2024-11-29 01:05:42,285] [pool-1-thread-4] Initializing /data/glen/QuitIJ/4202A2chtest.oib:
[testng] [2024-11-29 01:05:46,394] [pool-1-thread-4] Initializing /data/barbara/Image_with_failed_import.oib:
[testng] [2024-11-29 01:05:51,355] [pool-1-thread-4] Initializing /data/shane/Data Subset/EX5-10 fresh sol.oib:
[testng] [2024-11-29 01:05:55,398] [pool-1-thread-4] Initializing /data/yoshihito/XY.oif:
[testng] [2024-11-29 01:06:14,748] [pool-1-thread-4] Initializing /data/stefan/cytosol_01a.oif:
[testng] [2024-11-29 01:07:16,038] [pool-1-thread-7] Initializing /data/brian/Rhodamine-PI-1.oib:
[testng] [2024-11-29 01:07:20,287] [pool-1-thread-7] Initializing /data/david/Image0016.oib:
[testng] [2024-11-29 01:07:24,195] [pool-1-thread-7] Initializing /data/aryeh/061010 plate 1/Image0002_08.oib:
[testng] [2024-11-29 01:07:26,121] [pool-1-thread-3] Initializing /data/molly/11OCT7.OIF:
[testng] [2024-11-29 01:07:41,871] [pool-1-thread-7] Initializing /data/stefan/121206_IHC_Ncad_647_in_515_WT_36hpf_e1.oib:
[testng] [2024-11-29 01:07:46,272] [pool-1-thread-7] Initializing /data/glen/QuitIJ/4202A2chtest.oif:
[testng] [2024-11-29 01:07:53,889] [pool-1-thread-5] Initializing /data/allan/62909#1.oib:
[testng] [2024-11-29 01:07:57,671] [pool-1-thread-5] Initializing /data/molly/11OCT11.OIF:
[testng] [2024-11-29 01:09:40,107] [pool-1-thread-12] Initializing /data/glen/simulstack.oif:
[testng] [2024-11-29 01:10:16,614] [pool-1-thread-8] Initializing /data/brian/LILY POLLEN.oib:
[testng] [2024-11-29 01:10:23,321] [pool-1-thread-8] Initializing /data/molly/11OCT10.OIF:
[testng] [2024-11-29 01:12:34,742] [pool-1-thread-11] Initializing /data/brian/Kaede-Neuron-9 405XYZ1.oib:
[testng] [2024-11-29 01:12:39,497] [pool-1-thread-11] Initializing /data/christian/20min.oif:
[testng] [2024-11-29 01:12:57,781] [pool-1-thread-11] Initializing /data/brian/Caged Glu-3 point.oib:
[testng] [2024-11-29 01:13:02,866] [pool-1-thread-11] Initializing /data/aryeh/control_test.oib:
[testng] [2024-11-29 01:13:32,538] [pool-1-thread-11] Initializing /data/glen/LUT issue/UVgreenredfarred.oif:
[testng] [2024-11-29 01:14:26,165] [pool-1-thread-11] Initializing /data/alex/31h_pea3_fgf10_01_1.oif:
[testng] [2024-11-29 01:17:01,781] [pool-1-thread-7] Initializing /data/aryeh/061010 plate 1/Image0002_04.oib:
[testng] [2024-11-29 01:17:07,829] [pool-1-thread-7] Initializing /data/qa-17748/Image0098.oib:
[testng] [2024-11-29 01:17:11,370] [pool-1-thread-7] Initializing /data/stephane/817A_3-0003_01.oib:
[testng] [2024-11-29 01:17:15,935] [pool-1-thread-7] Initializing /data/tom/RGB-1.avi:
[testng] [2024-11-29 01:17:18,936] [pool-1-thread-7] Initializing /data/brian/NEURON_TIMELAPS_2.oib:
[testng] [2024-11-29 01:17:25,088] [pool-1-thread-7] Initializing /data/brian/Kaede15.oib:
[testng] [2024-11-29 01:17:30,573] [pool-1-thread-7] Initializing /data/stefan/cytosol_08b.oif:
[testng] [2024-11-29 01:22:23,333] [pool-1-thread-12] Initializing /data/glen/Null file/test change.oif:
[testng] [2024-11-29 01:22:57,587] [pool-1-thread-12] Initializing /data/yoshihito/XY.oib:
[testng] [2024-11-29 01:23:02,056] [pool-1-thread-12] Initializing /data/glen/LUT issue/60x11.oif:
[testng] [2024-11-29 01:23:45,318] [pool-1-thread-6] Initializing /data/jean-claude/villositerat0heurea.oib:
[testng] [2024-11-29 01:23:51,169] [pool-1-thread-6] Initializing /data/johannes/step4.bmp:
[testng] [2024-11-29 01:23:53,651] [pool-1-thread-6] Initializing /data/johannes/step4b.bmp:
[testng] [2024-11-29 01:23:56,351] [pool-1-thread-6] Initializing /data/simon/used_to_work.oib:
[testng] [2024-11-29 01:24:05,627] [pool-1-thread-6] Initializing /data/johannes/step3.bmp:
[testng] [2024-11-29 01:24:08,861] [pool-1-thread-6] Initializing /data/chris/missegragation-15.oib:
[testng] [2024-11-29 01:24:16,605] [pool-1-thread-6] Initializing /data/stefan/test-with-stefan071024.oib:
[testng] [2024-11-29 01:24:22,351] [pool-1-thread-1] Initializing /data/stefan/yc2_live-03.oib:
[testng] [2024-11-29 01:24:33,536] [pool-1-thread-1] Initializing /data/brian/MitoRed-POPO3.oib:
[testng] [2024-11-29 01:24:34,596] [pool-1-thread-6] Initializing /data/aryeh/BP3 3h ch2.oif:
[testng] [2024-11-29 01:25:17,328] [pool-1-thread-3] Initializing /data/aryeh/061010 plate 1/Image0002_10.oib:
[testng] [2024-11-29 01:25:23,390] [pool-1-thread-1] Initializing /data/jae/Image0001.oib:
[testng] [2024-11-29 01:25:26,393] [pool-1-thread-3] Initializing /data/glen/singlesimul.oif:
[testng] [2024-11-29 01:25:31,645] [pool-1-thread-1] Initializing /data/satoshi/60x_5x_1.oif:
[testng] [2024-11-29 01:26:28,276] [pool-1-thread-3] Initializing /data/marc/V0606L.oib:
[testng] [2024-11-29 01:26:47,061] [pool-1-thread-3] Initializing /data/aryeh/061010 plate 1/Image0002_03.oib:
[testng] [2024-11-29 01:26:54,461] [pool-1-thread-3] Initializing /data/aryeh/PIP2 ESCV control Z 1.oib:
[testng] 02:28:34,998 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
[testng] 02:28:34,998 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:28:34,999 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-11-29_02-28-34.log]
[testng] 02:28:34,999 |-INFO in ch.qos.logback.core.sift.SiftProcessor@64e78ff - End of configuration.
[testng] 02:34:29,886 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
[testng] 02:34:29,886 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:34:29,888 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-11-29_02-34-29.log]
[testng] 02:34:29,888 |-INFO in ch.qos.logback.core.sift.SiftProcessor@42becaf6 - End of configuration.
[testng]
[testng] ===============================================
[testng] Bio-Formats software test suite
[testng] Total tests run: 7632, Failures: 0, Skips: 0
[testng] ===============================================
[testng]
BUILD SUCCESSFUL
Total time: 110 minutes 18 seconds
Finished: SUCCESS