Started by upstream project "BIOFORMATS-test-repo" build number 273
originally caused by:
 Started by user devspace
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder
[BIOFORMATS-test-folder] $ /bin/bash -xe /tmp/jenkins14524631033560882901.sh
+ '[' sxm = slidebook ']'
++ date +%u
+ '[' 5 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_43048_merge_ci -v /uod/idr/repos/curated/sxm:/data -v /uod/idr-scratch/merge-ci/curated/sxm:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
     [echo] isSnapshot = true

init-title:
     [echo] ----------=========== bio-formats-testing-framework ===========----------

init-timestamp:

init:

copy-resources:

compile:
[resolver:resolve] Resolving artifacts

compile-tests:
[resolver:resolve] Resolving artifacts
    [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test

test-automated:
   [testng] File leak detector installed
   [testng] 08:43:34,963 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
   [testng] 08:43:34,965 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - No custom configurators were discovered as a service.
   [testng] 08:43:34,965 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 08:43:34,966 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 08:43:34,966 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
   [testng] 08:43:34,966 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
   [testng] 08:43:34,966 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 0 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
   [testng] 08:43:34,966 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 08:43:34,967 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 08:43:34,967 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
   [testng] 08:43:34,967 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
   [testng] 08:43:34,967 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
   [testng] 08:43:35,190 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
   [testng] 08:43:35,190 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
   [testng] 08:43:35,217 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
   [testng] 08:43:35,217 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
   [testng] 08:43:35,225 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
   [testng] 08:43:35,225 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
   [testng] 08:43:35,225 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
   [testng] 08:43:35,226 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
   [testng] 08:43:35,226 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@7a69b07 - End of configuration.
   [testng] 08:43:35,227 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@636be97c - Registering current configuration as safe fallback point
   [testng] 08:43:35,227 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 260 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
   [testng] [2024-11-29 08:43:35,237] [main] java.version = 1.8.0_342
   [testng] 08:43:35,240 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
   [testng] 08:43:35,240 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 08:43:35,285 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-11-29_08-43-35.log]
   [testng] 08:43:35,287 |-INFO in ch.qos.logback.core.sift.SiftProcessor@13c9d689 - End of configuration.
   [testng] [2024-11-29 08:43:35,289] [main] testng.directory = /data
   [testng] [2024-11-29 08:43:35,289] [main] testng.configDirectory = /config
   [testng] [2024-11-29 08:43:35,301] [main] testng.multiplier = 1.0
   [testng] [2024-11-29 08:43:35,302] [main] testng.in-memory = false
   [testng] [2024-11-29 08:43:35,302] [main] testng.allow-missing = false
   [testng] [2024-11-29 08:43:35,302] [main] user.language = en
   [testng] [2024-11-29 08:43:35,302] [main] user.country = ${user.country}
   [testng] [2024-11-29 08:43:35,302] [main] Maximum heap size = 13653 MB
   [testng] Scanning for files...
   [testng] [2024-11-29 08:47:02,373] [main] ----------------------------------------
   [testng] [2024-11-29 08:47:02,373] [main] Total files: 268
   [testng] [2024-11-29 08:47:02,373] [main] Scan time: 207.071 s (772 ms/file)
   [testng] [2024-11-29 08:47:02,373] [main] ----------------------------------------
   [testng] Building list of tests...
   [testng] Ready to test 160 files
   [testng] [TestNG] Running:
   [testng]   Bio-Formats software test suite
   [testng] 
   [testng] [2024-11-29 08:53:15,670] [pool-1-thread-1] Initializing /data/steve/JEOL/SPM (Hiroyuki Isobe)/HOPG.tif: 
   [testng] 08:53:15,671 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
   [testng] 08:53:15,671 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 08:53:15,672 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-11-29_08-53-15.log]
   [testng] 08:53:15,672 |-INFO in ch.qos.logback.core.sift.SiftProcessor@70b4716c - End of configuration.
   [testng] [2024-11-29 08:53:18,602] [pool-1-thread-12] Initializing /data/steve/TIFF/HAFF SEM: 
   [testng] 08:53:18,602 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
   [testng] 08:53:18,602 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 08:53:18,603 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-11-29_08-53-18.log]
   [testng] 08:53:18,603 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6cb6fa7d - End of configuration.
   [testng] [2024-11-29 08:53:21,566] [pool-1-thread-11] Initializing /data/steve/Oxford Instr (Yoshimasa)/98042103.TIF: 
   [testng] 08:53:21,566 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
   [testng] 08:53:21,567 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 08:53:21,567 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-11-29_08-53-21.log]
   [testng] 08:53:21,568 |-INFO in ch.qos.logback.core.sift.SiftProcessor@501ed94f - End of configuration.
   [testng] [2024-11-29 08:53:24,284] [pool-1-thread-10] Initializing /data/steve/RHK Tech/RHK STS (Peter Sloan)/SloanSpec.SM2: 
   [testng] 08:53:24,284 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
   [testng] 08:53:24,284 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 08:53:24,285 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-11-29_08-53-24.log]
   [testng] 08:53:24,285 |-INFO in ch.qos.logback.core.sift.SiftProcessor@32ecb8e5 - End of configuration.
   [testng] [2024-11-29 08:53:25,213] [pool-1-thread-9] Initializing /data/steve/UBM (Rosset)/SG2.PR3: 
   [testng] 08:53:25,213 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
   [testng] 08:53:25,213 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 08:53:25,214 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-11-29_08-53-25.log]
   [testng] 08:53:25,214 |-INFO in ch.qos.logback.core.sift.SiftProcessor@625d3e37 - End of configuration.
   [testng] [2024-11-29 08:53:25,977] [pool-1-thread-8] Initializing /data/steve/TopoMetrix/Topo MFM (SC)/NDPOL-01.TFR: 
   [testng] 08:53:25,978 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
   [testng] 08:53:25,978 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 08:53:25,978 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-11-29_08-53-25.log]
   [testng] 08:53:25,979 |-INFO in ch.qos.logback.core.sift.SiftProcessor@792fc2eb - End of configuration.
   [testng] [2024-11-29 08:53:26,651] [pool-1-thread-7] Initializing /data/steve/SBIG/M81 H 250s Tr=5s: 
   [testng] 08:53:26,651 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
   [testng] 08:53:26,651 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 08:53:26,652 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-11-29_08-53-26.log]
   [testng] 08:53:26,652 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3a5327ec - End of configuration.
   [testng] [2024-11-29 08:53:29,363] [pool-1-thread-6] Initializing /data/steve/Philips (Markus G)/135-30.IMG: 
   [testng] 08:53:29,363 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
   [testng] 08:53:29,363 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 08:53:29,364 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-11-29_08-53-29.log]
   [testng] 08:53:29,364 |-INFO in ch.qos.logback.core.sift.SiftProcessor@14961704 - End of configuration.
   [testng] [2024-11-29 08:53:30,034] [pool-1-thread-5] Initializing /data/steve/JPK Instr (Christian L)/Virus.jpk: 
   [testng] 08:53:30,034 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
   [testng] 08:53:30,034 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 08:53:30,035 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-11-29_08-53-30.log]
   [testng] 08:53:30,035 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2e2d19e3 - End of configuration.
   [testng] [2024-11-29 08:53:31,244] [pool-1-thread-4] Initializing /data/steve/JEOL/WinSem (Sue)/Shuttle tile ceramic/SHUTTLEB.IMG: 
   [testng] 08:53:31,244 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
   [testng] 08:53:31,244 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 08:53:31,244 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-11-29_08-53-31.log]
   [testng] 08:53:31,245 |-INFO in ch.qos.logback.core.sift.SiftProcessor@256ac189 - End of configuration.
   [testng] [2024-11-29 08:53:32,549] [pool-1-thread-3] Initializing /data/steve/Zeiss LSM/Zeiss LSM (John S)/Zeiss LSM 2 samples:pixel/coltubfitc1proj.lsm: 
   [testng] 08:53:32,550 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
   [testng] 08:53:32,550 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 08:53:32,550 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-11-29_08-53-32.log]
   [testng] 08:53:32,551 |-INFO in ch.qos.logback.core.sift.SiftProcessor@34ea65de - End of configuration.
   [testng] [2024-11-29 08:53:33,980] [pool-1-thread-2] Initializing /data/steve/RHK Tech/RHK STS (Peter Sloan)/B50303AS.SM2: 
   [testng] 08:53:33,981 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
   [testng] 08:53:33,981 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 08:53:33,981 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-11-29_08-53-33.log]
   [testng] 08:53:33,982 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6a9b0d52 - End of configuration.
   [testng] [2024-11-29 08:53:42,000] [pool-1-thread-9] Initializing /data/steve/Seiko Instr (Hwansoo)/05808001-3.xqd: 
   [testng] [2024-11-29 08:53:42,947] [pool-1-thread-6] Initializing /data/steve/JEOL/WinSem (Sue)/SIC2.IMG: 
   [testng] [2024-11-29 08:53:44,270] [pool-1-thread-8] Initializing /data/steve/Zeiss LSM/Zeiss LSM (John S)/Zeiss LSM 1 sample:pixel/ug6proj3.lsm: 
   [testng] [2024-11-29 08:53:45,451] [pool-1-thread-2] Initializing /data/steve/Misc SXM test images/Hough transform/Dale's bubbles: 
   [testng] [2024-11-29 08:53:47,917] [pool-1-thread-10] Initializing /data/steve/TIFF/Macrophage cell images/T24-24 1600 36_48-bit.tif: 
   [testng] [2024-11-29 08:53:51,765] [pool-1-thread-3] Initializing /data/steve/RHK Tech/RHK (Bob Baker)/Examp_03.SM2: 
   [testng] [2024-11-29 08:53:52,920] [pool-1-thread-5] Initializing /data/steve/Burleigh/Burleigh v2/Burleigh v2 (Phil W)/0_h4_4.img: 
   [testng] [2024-11-29 08:53:59,811] [pool-1-thread-11] Initializing /data/steve/Gatan/Gatan PC (Eric Leroy)/Iron map 10.dm3: 
   [testng] [2024-11-29 08:54:00,380] [pool-1-thread-4] Initializing /data/steve/Hamamatsu (Keith B)/HIS-12bit-2b.HIS: 
   [testng] [2024-11-29 08:54:01,350] [pool-1-thread-9] Initializing /data/steve/JPK Instr (Christian L)/Titanium-implant.jpk: 
   [testng] [2024-11-29 08:54:04,424] [pool-1-thread-3] Initializing /data/steve/Quesant Instr/Quesant v1.2 (Marc F)/stm2.afm: 
   [testng] [2024-11-29 08:54:05,421] [pool-1-thread-12] Initializing /data/steve/Molecular Imaging/Mol Imag v5.0 (Lionel S)/Cu#18-NaOH-035.STP: 
   [testng] [2024-11-29 08:54:06,372] [pool-1-thread-7] Initializing /data/steve/Gatan/Gatan TIFF/THE FLY 4 TIFF: 
   [testng] [2024-11-29 08:54:08,806] [pool-1-thread-1] Initializing /data/steve/Gatan/TEM (Larry Thomas)/TEM 10 KX: 
   [testng] [2024-11-29 08:54:09,183] [pool-1-thread-8] Initializing /data/steve/FITS/M51.fits: 
   [testng] [2024-11-29 08:54:09,388] [pool-1-thread-11] Initializing /data/steve/JEOL/WinSem (Sue)/TA.IMG: 
   [testng] [2024-11-29 08:54:10,418] [pool-1-thread-6] Initializing /data/steve/Molecular Imaging/Mol Imag v5.2 (Steve Higgins)/014.STP: 
   [testng] [2024-11-29 08:54:13,053] [pool-1-thread-2] Initializing /data/steve/VG SAM (Karen)/BGND.DTI: 
   [testng] [2024-11-29 08:54:14,014] [pool-1-thread-4] Initializing /data/steve/Oxford Instr (Yoshimasa)/80619a.top: 
   [testng] [2024-11-29 08:54:16,143] [pool-1-thread-3] Initializing /data/steve/JEOL/WinSem (Sue)/Shuttle tile ceramic/SHUTTLEC.IMG: 
   [testng] [2024-11-29 08:54:17,538] [pool-1-thread-8] Initializing /data/steve/TopoMetrix/Topo SFM (SC)/IM_P1.TFR: 
   [testng] [2024-11-29 08:54:19,249] [pool-1-thread-10] Initializing /data/steve/JEOL/SPM (Hiroyuki Isobe)/990304j.tif: 
   [testng] [2024-11-29 08:54:22,168] [pool-1-thread-5] Initializing /data/steve/RHK Tech/RHK (Bob Baker)/SCREEN1.PICT: 
   [testng] [2024-11-29 08:54:23,004] [pool-1-thread-9] Initializing /data/steve/Gatan/Gatan (Sue D)/Honey Bee: 
   [testng] [2024-11-29 08:54:23,567] [pool-1-thread-1] Initializing /data/steve/Zeiss LSM/Zeiss LSM (Ewald B)/NIALDIAN.TIF: 
   [testng] [2024-11-29 08:54:26,051] [pool-1-thread-12] Initializing /data/steve/FITS/Meade DSI/M31bR1.fts: 
   [testng] [2024-11-29 08:54:26,398] [pool-1-thread-6] Initializing /data/steve/Misc SXM test images/AVI movie/Clean Cu(110) LEED.avi: 
   [testng] [2024-11-29 08:54:27,777] [pool-1-thread-2] Initializing /data/steve/Hamamatsu (Keith B)/HIS-16bit-nopack.HIS: 
   [testng] [2024-11-29 08:54:29,204] [pool-1-thread-4] Initializing /data/steve/Leica TCS (Keith B)/25_5BJ.SXM: 
   [testng] [2024-11-29 08:54:32,456] [pool-1-thread-12] Initializing /data/steve/TopoMetrix/Topo STM v5 (Ewald B)/c80-50.ffr: 
   [testng] [2024-11-29 08:54:33,539] [pool-1-thread-8] Initializing /data/steve/Zeiss LSM/Zeiss LSM (Ewald B)/FGD006.TIF: 
   [testng] [2024-11-29 08:54:36,621] [pool-1-thread-7] Initializing /data/steve/FITS/M104.fits: 
   [testng] [2024-11-29 08:54:36,866] [pool-1-thread-11] Initializing /data/steve/Quesant Instr/Quesant v2.0 (Brad Taft)/03031020.afm: 
   [testng] [2024-11-29 08:54:37,801] [pool-1-thread-3] Initializing /data/steve/RHK Tech/RHK (Bob Baker)/Examp_01.SM2: 
   [testng] [2024-11-29 08:54:38,724] [pool-1-thread-9] Initializing /data/steve/RHK Tech/RHK (Bob Baker)/Examp_04.SM2: 
   [testng] [2024-11-29 08:54:40,253] [pool-1-thread-5] Initializing /data/steve/SBIG/M82 H 100s Tr=10s: 
   [testng] [2024-11-29 08:54:42,992] [pool-1-thread-6] Initializing /data/steve/RHK Tech/RHK (Bob Baker)/Examp_02.SM2: 
   [testng] [2024-11-29 08:54:43,833] [pool-1-thread-2] Initializing /data/steve/Gatan/Gatan (Sue D)/THE FLY A: 
   [testng] [2024-11-29 08:54:44,964] [pool-1-thread-7] Initializing /data/steve/Gatan/Gatan (Patrick Burton)/PDB_DARK_25k.dm2: 
   [testng] [2024-11-29 08:54:46,136] [pool-1-thread-10] Initializing /data/steve/TIFF/Macrophage cell images/D1-A-1 1392 36-bit.tif: 
   [testng] [2024-11-29 08:54:47,472] [pool-1-thread-1] Initializing /data/steve/Gatan/Gatan PC (Eric Leroy)/BF super alliage.dm3: 
   [testng] [2024-11-29 08:54:48,040] [pool-1-thread-12] Initializing /data/steve/Burleigh/Burleigh v1/Burleigh.IMG: 
   [testng] [2024-11-29 08:54:51,355] [pool-1-thread-11] Initializing /data/steve/Philips (Markus G)/135-33.IMG: 
   [testng] [2024-11-29 08:54:52,272] [pool-1-thread-3] Initializing /data/steve/JEOL/WinSem (Sue)/Shuttle tile ceramic/SHUTTLED.IMG: 
   [testng] [2024-11-29 08:54:53,823] [pool-1-thread-9] Initializing /data/steve/TopoMetrix/Topo STM v5 (Ewald B)/c80-50zfr.tif: 
   [testng] [2024-11-29 08:54:58,243] [pool-1-thread-7] Initializing /data/steve/Misc SXM test images/Fake STM/Fake STM (8 rpts) TIFF: 
   [testng] [2024-11-29 08:55:00,762] [pool-1-thread-4] Initializing /data/steve/JEOL/WinSem (Sue)/RICK1.IMG: 
   [testng] [2024-11-29 08:55:02,009] [pool-1-thread-2] Initializing /data/steve/Quesant Instr/Quesant v2.0 (Brad Taft)/03031004.afm: 
   [testng] [2024-11-29 08:55:02,896] [pool-1-thread-1] Initializing /data/steve/Misc SXM test images/Hough transform/Nathalie's test: 
   [testng] [2024-11-29 08:55:05,968] [pool-1-thread-6] Initializing /data/steve/TopoMetrix/Topo STM v4 (Gabriella)/159HF02.ZFP: 
   [testng] [2024-11-29 08:55:07,872] [pool-1-thread-8] Initializing /data/steve/Hamamatsu (Keith B)/HIS-12bit-1a.HIS: 
   [testng] [2024-11-29 08:55:09,942] [pool-1-thread-11] Initializing /data/steve/Gatan/Gatan (Sue D)/THE FLY 3: 
   [testng] [2024-11-29 08:55:13,866] [pool-1-thread-6] Initializing /data/steve/JPK Instr (Christian L)/Anti-reflex-coating.jpk: 
   [testng] [2024-11-29 08:55:15,291] [pool-1-thread-2] Initializing /data/steve/RHK Tech/RHK (Oliver Leifeld)/SM02_08.SM2: 
   [testng] [2024-11-29 08:55:16,080] [pool-1-thread-5] Initializing /data/steve/Gatan/Gatan (Sue D)/WOODLOUSE: 
   [testng] [2024-11-29 08:55:16,562] [pool-1-thread-10] Initializing /data/steve/Oxford Instr (Yoshimasa)/98042103.top: 
   [testng] [2024-11-29 08:55:17,191] [pool-1-thread-3] Initializing /data/steve/Molecular Imaging/Mol Imag v4.19 (Michael Z)/Wafer_vesicles_2min_010.STP: 
   [testng] [2024-11-29 08:55:17,953] [pool-1-thread-8] Initializing /data/steve/Gatan/Gatan TIFF/Si CHIP TIFF: 
   [testng] [2024-11-29 08:55:20,875] [pool-1-thread-12] Initializing /data/steve/Misc SXM test images/Chromosome images/HRhuman1.pict: 
   [testng] [2024-11-29 08:55:22,467] [pool-1-thread-7] Initializing /data/steve/RHK Tech/RHK-XPM Pro (Lydie L)/B70417000K.SM3: 
   [testng] [2024-11-29 08:55:23,238] [pool-1-thread-9] Initializing /data/steve/TIFF/8MAR03A.TIFF: 
   [testng] [2024-11-29 08:55:25,471] [pool-1-thread-11] Initializing /data/steve/RHK Tech/RHK (Mark Flowers)/Demo07.sm2: 
   [testng] [2024-11-29 08:55:27,746] [pool-1-thread-5] Initializing /data/steve/Gatan/Gatan Mac (Guy Mayor)/Digital Micrograph 3.4: 
   [testng] [2024-11-29 08:55:28,295] [pool-1-thread-10] Initializing /data/steve/Gatan/Gatan Mac (Guy Mayor)/Digital Micrograph 2.5: 
   [testng] [2024-11-29 08:55:28,879] [pool-1-thread-1] Initializing /data/steve/Unisoku (Takashi)/Sample.HDR: 
   [testng] [2024-11-29 08:55:30,090] [pool-1-thread-2] Initializing /data/steve/Misc SXM test images/Chromosome images/Chironomus2.pict: 
   [testng] [2024-11-29 08:55:30,721] [pool-1-thread-3] Initializing /data/steve/Hamamatsu (Keith B)/HIS-12bit-3.HIS: 
   [testng] [2024-11-29 08:55:31,419] [pool-1-thread-12] Initializing /data/steve/TIFF/CD-ROM TIFF: 
   [testng] [2024-11-29 08:55:33,620] [pool-1-thread-4] Initializing /data/steve/Misc SXM test images/BMP images/m20_p.bmp: 
   [testng] [2024-11-29 08:55:33,802] [pool-1-thread-6] Initializing /data/steve/Bio-Rad (Nico Lindegger)/a.PIC: 
   [testng] [2024-11-29 08:55:36,704] [pool-1-thread-5] Initializing /data/steve/Misc SXM test images/Chromosome images/HKGmaizeMei3.pict: 
   [testng] [2024-11-29 08:55:37,346] [pool-1-thread-7] Initializing /data/steve/Quesant Instr/Quesant v1.2 (Marc F)/stm1.afm: 
   [testng] [2024-11-29 08:55:39,020] [pool-1-thread-4] Initializing /data/steve/Quesant Instr/Quesant v2.0 (Hal E)/2-18-05A.afm: 
   [testng] [2024-11-29 08:55:39,785] [pool-1-thread-11] Initializing /data/steve/TIFF/Macrophage cell images/Pre-d-0 1392 36-bit.tif: 
   [testng] [2024-11-29 08:55:41,110] [pool-1-thread-8] Initializing /data/steve/Philips (Markus G)/135-31.IMG: 
   [testng] [2024-11-29 08:55:41,872] [pool-1-thread-10] Initializing /data/steve/TIFF/Little owl TIFF: 
   [testng] [2024-11-29 08:55:45,001] [pool-1-thread-2] Initializing /data/steve/TIFF/Macrophage cell images/T48-44 800 24-bit.tif: 
   [testng] [2024-11-29 08:55:46,661] [pool-1-thread-9] Initializing /data/steve/RHK Tech/RHK (Mark Flowers)/Silicon.sm2: 
   [testng] [2024-11-29 08:55:47,366] [pool-1-thread-3] Initializing /data/steve/Quesant Instr/Quesant v1.2 (Marc F)/afm3.afm: 
   [testng] [2024-11-29 08:55:48,045] [pool-1-thread-6] Initializing /data/steve/Gatan/Gatan PC (Eric Leroy)/Oxygen map 1.dm3: 
   [testng] [2024-11-29 08:55:48,462] [pool-1-thread-5] Initializing /data/steve/VG SAM (Karen)/PEAK.DTI: 
   [testng] [2024-11-29 08:55:49,230] [pool-1-thread-7] Initializing /data/steve/JEOL/SPM (Hiroyuki Isobe)/JEOL3.tif: 
   [testng] [2024-11-29 08:55:52,660] [pool-1-thread-4] Initializing /data/steve/Gatan/Gatan TIFF/BALL TIFF: 
   [testng] [2024-11-29 08:55:55,113] [pool-1-thread-8] Initializing /data/steve/Seiko Instr (Hwansoo)/05808001-2.xqd: 
   [testng] [2024-11-29 08:55:55,843] [pool-1-thread-6] Initializing /data/steve/TopoMetrix/Topo STM v5 (Ewald B)/c80-50ffr.tif: 
   [testng] [2024-11-29 08:55:58,210] [pool-1-thread-5] Initializing /data/steve/TIFF/Macrophage cell images/T08-08 1600 24-bit.tif: 
   [testng] [2024-11-29 08:56:00,357] [pool-1-thread-12] Initializing /data/steve/Gatan/Gatan (Sue D)/THE FLY 2: 
   [testng] [2024-11-29 08:56:00,789] [pool-1-thread-11] Initializing /data/steve/Quesant Instr/Quesant v1.2 (Marc F)/afm1.afm: 
   [testng] [2024-11-29 08:56:01,507] [pool-1-thread-3] Initializing /data/steve/Seiko Instr (Hwansoo)/05808001.xqd: 
   [testng] [2024-11-29 08:56:02,237] [pool-1-thread-9] Initializing /data/steve/RHK Tech/RHK-XPM Pro (Lydie L)/B70417000Q.SM3: 
   [testng] [2024-11-29 08:56:03,030] [pool-1-thread-1] Initializing /data/steve/Gatan/Gatan (Sue D)/SEM 500X (Larry): 
   [testng] [2024-11-29 08:56:05,013] [pool-1-thread-10] Initializing /data/steve/Hamamatsu (Keith B)/HIS-16bit-packed.HIS: 
   [testng] [2024-11-29 08:56:05,691] [pool-1-thread-8] Initializing /data/steve/Gatan/Gatan (Sue D)/THE FLY: 
   [testng] [2024-11-29 08:56:06,374] [pool-1-thread-12] Initializing /data/steve/RHK Tech/RHK IV (Koji N)/02042603.sm2: 
   [testng] [2024-11-29 08:56:07,587] [pool-1-thread-11] Initializing /data/steve/SM-Camera/W(110)+Fe,5nA,30min@110eV: 
   [testng] [2024-11-29 08:56:09,865] [pool-1-thread-2] Initializing /data/steve/TIFF/ta123 stack TIFF: 
   [testng] [2024-11-29 08:56:12,137] [pool-1-thread-3] Initializing /data/steve/JEOL/SPM (Masashi N)/FFM204.TIF: 
   [testng] [2024-11-29 08:56:14,311] [pool-1-thread-7] Initializing /data/steve/JEOL/WinSem (Sue)/CONCRETE.IMG: 
   [testng] [2024-11-29 08:56:15,228] [pool-1-thread-9] Initializing /data/steve/SM-Camera/Orhan + IPES rig: 
   [testng] [2024-11-29 08:56:17,320] [pool-1-thread-6] Initializing /data/steve/Quesant Instr/Quesant v1.2 (Marc F)/afm2.afm: 
   [testng] [2024-11-29 08:56:18,095] [pool-1-thread-4] Initializing /data/steve/Quesant Instr/Quesant v1.2 (Marc F)/stm3.afm: 
   [testng] [2024-11-29 08:56:19,379] [pool-1-thread-1] Initializing /data/steve/JEOL/WinSem (Sue)/BALLS.IMG: 
   [testng] [2024-11-29 08:56:21,079] [pool-1-thread-8] Initializing /data/steve/RHK Tech/RHK (Bob Baker)/Examp_05.SM2: 
   [testng] [2024-11-29 08:56:21,923] [pool-1-thread-10] Initializing /data/steve/Philips (Markus G)/135-32.IMG: 
   [testng] [2024-11-29 08:56:22,627] [pool-1-thread-12] Initializing /data/steve/Burleigh/Burleigh v2/Graphite: 
   [testng] [2024-11-29 08:56:25,040] [pool-1-thread-5] Initializing /data/steve/JEOL/WinSem (Sue)/Shuttle tile ceramic/SHUTTLEE.IMG: 
   [testng] [2024-11-29 08:56:27,550] [pool-1-thread-4] Initializing /data/steve/Burleigh/Burleigh v2/Burleigh v2 (Phil W)/1_2h2_3.img: 
   [testng] [2024-11-29 08:56:29,810] [pool-1-thread-6] Initializing /data/steve/Misc SXM test images/Stacks/DoF test stack (Ahnelt): 
   [testng] [2024-11-29 08:56:32,194] [pool-1-thread-2] Initializing /data/steve/Misc SXM test images/Stacks/Fred's stack: 
   [testng] [2024-11-29 08:56:35,425] [pool-1-thread-8] Initializing /data/steve/FITS/Meade DSI/M31bG1.fts: 
   [testng] [2024-11-29 08:56:35,749] [pool-1-thread-10] Initializing /data/steve/Zeiss LSM/Zeiss LSM (John S)/Zeiss LSM 2 samples:pixel/coltubfitc1.lsm: 
   [testng] [2024-11-29 08:56:36,868] [pool-1-thread-11] Initializing /data/steve/Seiko Instr (Hwansoo)/05808002.xqf: 
   [testng] [2024-11-29 08:56:37,656] [pool-1-thread-3] Initializing /data/steve/TopoMetrix/Topo SFM (SC)/FFT test: 
   [testng] [2024-11-29 08:56:39,780] [pool-1-thread-9] Initializing /data/steve/RHK Tech/RHK (Mark Flowers)/Demo04.sm2: 
   [testng] [2024-11-29 08:56:40,372] [pool-1-thread-1] Initializing /data/steve/JEOL/SEM (Steve Foulds)/IPS2000.DAT: 
   [testng] [2024-11-29 08:56:41,486] [pool-1-thread-7] Initializing /data/steve/FITS/M13.fits: 
   [testng] [2024-11-29 08:56:42,651] [pool-1-thread-8] Initializing /data/steve/TIFF/Hough test TIFF: 
   [testng] [2024-11-29 08:56:46,131] [pool-1-thread-7] Initializing /data/steve/Zeiss LSM/Zeiss LSM - 2 samp:pix (??)/16bcutagain.lsm: 
   [testng] [2024-11-29 08:56:47,211] [pool-1-thread-12] Initializing /data/steve/SBIG/M81 M 40s: 
   [testng] [2024-11-29 08:56:49,540] [pool-1-thread-5] Initializing /data/steve/TopoMetrix/Topo SFM (SC)/PA7.TFR: 
   [testng] [2024-11-29 08:56:50,740] [pool-1-thread-11] Initializing /data/steve/TopoMetrix/Topo MFM (SC)/NDR2-1.2FL: 
   [testng] [2024-11-29 08:56:51,489] [pool-1-thread-9] Initializing /data/steve/Hamamatsu (Keith B)/HIS-8bit.HIS: 
   [testng] [2024-11-29 08:56:52,069] [pool-1-thread-10] Initializing /data/steve/Philips (Markus G)/302.IMG: 
   [testng] [2024-11-29 08:56:52,598] [pool-1-thread-4] Initializing /data/steve/Molecular Imaging/Mol Imag v4.18 (Reinat)/npc-liq-sharO_003.STP: 
   [testng] [2024-11-29 08:56:53,218] [pool-1-thread-6] Initializing /data/steve/TopoMetrix/Topo STM (Liam McD)/GRID1.TFR: 
   [testng] [2024-11-29 08:56:56,101] [pool-1-thread-2] Initializing /data/steve/FITS/Meade DSI/M31bB1.fts: 
   [testng] [2024-11-29 08:56:56,521] [pool-1-thread-1] Initializing /data/steve/Molecular Imaging/Mol Imag v5.2 (Steve Higgins)/015.STP: 
   [testng] [2024-11-29 08:56:57,279] [pool-1-thread-5] Initializing /data/steve/Bio-Rad (Nico Lindegger)/b.PIC: 
   [testng] [2024-11-29 08:56:58,233] [pool-1-thread-7] Initializing /data/steve/JEOL/SPM (Masashi N)/AFM204.TIF: 
   [testng] [2024-11-29 08:57:00,524] [pool-1-thread-3] Initializing /data/steve/Zeiss LSM/Zeiss LSM (John S)/Zeiss LSM 1 sample:pixel/ug6stack3.lsm: 
   [testng] [2024-11-29 08:57:01,901] [pool-1-thread-11] Initializing /data/steve/Targa/Test.TGA: 
   [testng] [2024-11-29 08:57:02,759] [pool-1-thread-9] Initializing /data/steve/Misc SXM test images/Chromosome images/HKGmaizeMitose5.pict: 
   [testng] [2024-11-29 08:57:03,468] [pool-1-thread-4] Initializing /data/steve/TopoMetrix/Topo SFM (SC)/PA2.TFR: 
   [testng] [2024-11-29 08:57:04,303] [pool-1-thread-10] Initializing /data/steve/Gatan/Gatan (Patrick Burton)/PDB_DARK_25k.dm3: 
   [testng] [2024-11-29 08:57:04,697] [pool-1-thread-6] Initializing /data/steve/JEOL/WinSem (Sue)/Shuttle tile ceramic/SHUTTLEA.IMG: 
   [testng] [2024-11-29 08:57:06,019] [pool-1-thread-8] Initializing /data/steve/TIFF/Macrophage cell images/RT1-f-24 1600 24-bit.tif: 
   [testng] [2024-11-29 08:57:08,455] [pool-1-thread-12] Initializing /data/steve/TIFF/ta269 TIFF: 
   [testng] [2024-11-29 08:57:11,208] [pool-1-thread-2] Initializing /data/steve/TopoMetrix/Topo STM v5 (Ewald B)/c80-50.zfr: 
   [testng] [2024-11-29 08:57:13,315] [pool-1-thread-10] Initializing /data/steve/JEOL/SPM (Hiroyuki Isobe)/990301c.tif: 
   [testng] [2024-11-29 08:57:15,801] [pool-1-thread-5] Initializing /data/steve/Quesant Instr/Quesant v2.0 (Hal E)/03-17-05A.afm: 
   [testng] [2024-11-29 08:57:16,536] [pool-1-thread-1] Initializing /data/steve/Misc SXM test images/Fake STM/Fake STM (4 rpts) TIFF: 
   [testng] [2024-11-29 08:57:19,068] [pool-1-thread-9] Initializing /data/steve/JEOL/JSM (Inger Ekvell)/g11@0.IMG: 
   [testng] [2024-11-29 08:57:20,329] [pool-1-thread-4] Initializing /data/steve/Molecular Imaging/Mol Imag v4.18 (Reinat)/TwoDots.STP: 
   [testng] [2024-11-29 08:57:21,191] [pool-1-thread-11] Initializing /data/steve/TIFF/CONCRETE TIFF: 
   [testng] [2024-11-29 08:57:24,114] [pool-1-thread-3] Initializing /data/steve/Philips (Markus G)/302.TIF: 
   [testng] [2024-11-29 08:57:26,284] [pool-1-thread-7] Initializing /data/steve/Leica TCS (Keith B)/25_5BB.SXM: 
   [testng] [2024-11-29 08:57:32,594] [pool-1-thread-6] Initializing /data/steve/Molecular Imaging/Mol Imag v4.18 (Reinat)/car-mac-con-g_003.STP: 
   [testng] [2024-11-29 08:57:33,564] [pool-1-thread-2] Initializing /data/steve/Burleigh/Burleigh v2/Burleigh v2 (Phil W)/0_h4_3.img: 
   [testng] 
   [testng] ===============================================
   [testng] Bio-Formats software test suite
   [testng] Total tests run: 8480, Failures: 0, Skips: 0
   [testng] ===============================================
   [testng] 

BUILD SUCCESSFUL
Total time: 14 minutes 20 seconds
Finished: SUCCESS