Started by upstream project "BIOFORMATS-test-repo" build number 273
originally caused by:
Started by user devspace
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@6
[BIOFORMATS-test-folder@6] $ /bin/bash -xe /tmp/jenkins13716388397051022495.sh
+ '[' zeiss-tiff = slidebook ']'
++ date +%u
+ '[' 5 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_43088_merge_ci -v /uod/idr/repos/curated/zeiss-tiff:/data -v /uod/idr-scratch/merge-ci/curated/zeiss-tiff:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
[echo] isSnapshot = true
init-title:
[echo] ----------=========== bio-formats-testing-framework ===========----------
init-timestamp:
init:
copy-resources:
compile:
[resolver:resolve] Resolving artifacts
compile-tests:
[resolver:resolve] Resolving artifacts
[javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
test-automated:
[testng] File leak detector installed
[testng] 10:48:17,092 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
[testng] 10:48:17,094 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - No custom configurators were discovered as a service.
[testng] 10:48:17,094 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 10:48:17,095 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 10:48:17,095 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
[testng] 10:48:17,095 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
[testng] 10:48:17,095 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 0 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
[testng] 10:48:17,095 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 10:48:17,096 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 10:48:17,096 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
[testng] 10:48:17,096 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
[testng] 10:48:17,096 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
[testng] 10:48:17,321 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
[testng] 10:48:17,321 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
[testng] 10:48:17,349 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
[testng] 10:48:17,349 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
[testng] 10:48:17,357 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
[testng] 10:48:17,357 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
[testng] 10:48:17,357 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
[testng] 10:48:17,357 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
[testng] 10:48:17,358 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@7a69b07 - End of configuration.
[testng] 10:48:17,358 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@636be97c - Registering current configuration as safe fallback point
[testng] 10:48:17,358 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 262 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
[testng] [2024-11-29 10:48:17,368] [main] java.version = 1.8.0_342
[testng] 10:48:17,372 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
[testng] 10:48:17,372 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 10:48:17,417 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-11-29_10-48-17.log]
[testng] 10:48:17,418 |-INFO in ch.qos.logback.core.sift.SiftProcessor@13c9d689 - End of configuration.
[testng] [2024-11-29 10:48:17,420] [main] testng.directory = /data
[testng] [2024-11-29 10:48:17,420] [main] testng.configDirectory = /config
[testng] [2024-11-29 10:48:17,432] [main] testng.multiplier = 1.0
[testng] [2024-11-29 10:48:17,432] [main] testng.in-memory = false
[testng] [2024-11-29 10:48:17,432] [main] testng.allow-missing = false
[testng] [2024-11-29 10:48:17,432] [main] user.language = en
[testng] [2024-11-29 10:48:17,433] [main] user.country = ${user.country}
[testng] [2024-11-29 10:48:17,433] [main] Maximum heap size = 13653 MB
[testng] Scanning for files...
[testng] [2024-11-29 10:51:18,597] [main] ----------------------------------------
[testng] [2024-11-29 10:51:18,597] [main] Total files: 15735
[testng] [2024-11-29 10:51:18,597] [main] Scan time: 181.164 s (11 ms/file)
[testng] [2024-11-29 10:51:18,598] [main] ----------------------------------------
[testng] Building list of tests...
[testng] Ready to test 125 files
[testng] [TestNG] Running:
[testng] Bio-Formats software test suite
[testng]
[testng] [2024-11-29 10:56:23,512] [pool-1-thread-1] Initializing /data/converted/converted/mri-stack.tif:
[testng] 10:56:23,513 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
[testng] 10:56:23,513 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 10:56:23,514 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-11-29_10-56-23.log]
[testng] 10:56:23,514 |-INFO in ch.qos.logback.core.sift.SiftProcessor@64245ff8 - End of configuration.
[testng] [2024-11-29 10:56:26,817] [pool-1-thread-12] Initializing /data/converted/joseph/BEST_EXAMPLE_LONGER_EXPOSURE.tif:
[testng] 10:56:26,817 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
[testng] 10:56:26,818 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 10:56:26,818 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-11-29_10-56-26.log]
[testng] 10:56:26,819 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2a78ea21 - End of configuration.
[testng] [2024-11-29 10:56:29,922] [pool-1-thread-11] Initializing /data/converted/shalin/ibidiuslide1-timelapse3_mid2.tif:
[testng] 10:56:29,922 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
[testng] 10:56:29,922 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 10:56:29,923 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-11-29_10-56-29.log]
[testng] 10:56:29,923 |-INFO in ch.qos.logback.core.sift.SiftProcessor@19225dae - End of configuration.
[testng] [2024-11-29 10:56:32,669] [pool-1-thread-10] Initializing /data/converted/kelsey/432x342BW.tif:
[testng] 10:56:32,670 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
[testng] 10:56:32,670 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 10:56:32,670 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-11-29_10-56-32.log]
[testng] 10:56:32,671 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3b35e00c - End of configuration.
[testng] [2024-11-29 10:56:35,328] [pool-1-thread-9] Initializing /data/converted/eirinn/pharm3-saline2-0147_11.tif:
[testng] 10:56:35,328 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
[testng] 10:56:35,328 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 10:56:35,329 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-11-29_10-56-35.log]
[testng] 10:56:35,329 |-INFO in ch.qos.logback.core.sift.SiftProcessor@54fa69bf - End of configuration.
[testng] [2024-11-29 10:56:38,049] [pool-1-thread-8] Initializing /data/converted/converted/2chz.tif:
[testng] 10:56:38,050 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
[testng] 10:56:38,050 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 10:56:38,050 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-11-29_10-56-38.log]
[testng] 10:56:38,051 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4f07dff6 - End of configuration.
[testng] [2024-11-29 10:56:40,684] [pool-1-thread-7] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_1.tif:
[testng] 10:56:40,684 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
[testng] 10:56:40,684 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 10:56:40,685 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-11-29_10-56-40.log]
[testng] 10:56:40,685 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2058dcfd - End of configuration.
[testng] [2024-11-29 10:56:43,813] [pool-1-thread-6] Initializing /data/converted/dietmar/138.tif:
[testng] 10:56:43,813 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
[testng] 10:56:43,813 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 10:56:43,814 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-11-29_10-56-43.log]
[testng] 10:56:43,814 |-INFO in ch.qos.logback.core.sift.SiftProcessor@16cb003 - End of configuration.
[testng] [2024-11-29 10:56:46,504] [pool-1-thread-5] Initializing /data/converted/jan/SampleStack_Mosaic4x5_comb.tif:
[testng] 10:56:46,505 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
[testng] 10:56:46,505 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 10:56:46,505 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-11-29_10-56-46.log]
[testng] 10:56:46,506 |-INFO in ch.qos.logback.core.sift.SiftProcessor@61140380 - End of configuration.
[testng] [2024-11-29 10:56:50,869] [pool-1-thread-4] Initializing /data/converted/markus/Brain_high_dynamic_range_imaging_Z-stack.tif:
[testng] 10:56:50,870 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
[testng] 10:56:50,870 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 10:56:50,871 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-11-29_10-56-50.log]
[testng] 10:56:50,872 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2aac5f12 - End of configuration.
[testng] [2024-11-29 10:56:53,683] [pool-1-thread-3] Initializing /data/converted/kelsey/650x514BW.tif:
[testng] 10:56:53,683 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
[testng] 10:56:53,683 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 10:56:53,684 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-11-29_10-56-53.log]
[testng] 10:56:53,684 |-INFO in ch.qos.logback.core.sift.SiftProcessor@58d7a758 - End of configuration.
[testng] [2024-11-29 10:56:56,163] [pool-1-thread-2] Initializing /data/converted/converted/damian.tif:
[testng] 10:56:56,163 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
[testng] 10:56:56,163 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 10:56:56,164 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-11-29_10-56-56.log]
[testng] 10:56:56,164 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5efc737e - End of configuration.
[testng] [2024-11-29 10:57:46,614] [pool-1-thread-10] Initializing /data/converted/converted/deconvolve6_pseudo_tl000_zs000.tif:
[testng] [2024-11-29 10:57:50,366] [pool-1-thread-2] Initializing /data/converted/dietmar/hmads-bac1-bac7-af488-rho-af647_pre-2006-03-30-ten.tif:
[testng] [2024-11-29 10:57:53,843] [pool-1-thread-1] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_14.tif:
[testng] [2024-11-29 10:57:57,884] [pool-1-thread-3] Initializing /data/scott/Slide133-04.tif:
[testng] [2024-11-29 10:58:49,683] [pool-1-thread-10] Initializing /data/converted/karsten/Bild1.tif:
[testng] [2024-11-29 10:58:56,447] [pool-1-thread-3] Initializing /data/converted/darren/section0002_w1.tif:
[testng] [2024-11-29 10:59:39,810] [pool-1-thread-12] Initializing /data/converted/monica/Monica_elegans_movie.tif:
[testng] [2024-11-29 10:59:54,625] [pool-1-thread-3] Initializing /data/converted/markus/Long_TL_CElegans.tif:
[testng] [2024-11-29 11:00:07,209] [pool-1-thread-10] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast-widefield.tif:
[testng] [2024-11-29 11:03:16,133] [pool-1-thread-8] Initializing /data/converted/dan/zstack_convalaria.tif:
[testng] [2024-11-29 11:04:03,519] [pool-1-thread-11] Initializing /data/scott/Slide133-11.tif:
[testng] [2024-11-29 11:04:09,689] [pool-1-thread-4] Initializing /data/converted/rolf/example_1-2010_11_25.tif:
[testng] [2024-11-29 11:04:17,983] [pool-1-thread-8] Initializing /data/converted/lior/live+cf2b.tif:
[testng] [2024-11-29 11:04:49,688] [pool-1-thread-11] Initializing /data/samples/mri-stack/mri-stack.tif:
[testng] [2024-11-29 11:05:01,241] [pool-1-thread-4] Initializing /data/converted/eirinn/12_16_2009-01-tara-hd-triple-5to15_position(1)5.tif:
[testng] [2024-11-29 11:05:30,930] [pool-1-thread-11] Initializing /data/qa-21570/250618_J1_diff_D3-2-0004.tif:
[testng] [2024-11-29 11:05:42,160] [pool-1-thread-8] Initializing /data/converted/joseph/E-2009-0001a.tif:
[testng] [2024-11-29 11:05:58,170] [pool-1-thread-2] Initializing /data/converted/markus/PC12_neuroblastoma_Fura2_exp#9.tif:
[testng] [2024-11-29 11:06:15,426] [pool-1-thread-11] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_13.tif:
[testng] [2024-11-29 11:08:24,624] [pool-1-thread-9] Initializing /data/qa-21570/250618_J1_diff_D3-2-0002.tif:
[testng] [2024-11-29 11:09:03,233] [pool-1-thread-9] Initializing /data/converted/converted/wtzer_series76_z003_ch00.tif:
[testng] [2024-11-29 11:09:16,506] [pool-1-thread-7] Initializing /data/converted/markus/Material_color_image_HRc_microscanned_4x3K.tif:
[testng] [2024-11-29 11:09:41,081] [pool-1-thread-9] Initializing /data/converted/eirinn/11_10_2009-01-lcstim-15-10-09_position(1).tif:
[testng] [2024-11-29 11:09:59,367] [pool-1-thread-7] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_24.tif:
[testng] [2024-11-29 11:10:06,462] [pool-1-thread-6] Initializing /data/converted/joseph/E-2009-0004.tif:
[testng] [2024-11-29 11:11:32,822] [pool-1-thread-1] Initializing /data/converted/markus/Smart_Experiment_4ch-T-time-stitched.tif:
[testng] [2024-11-29 11:14:05,789] [pool-1-thread-4] Initializing /data/othmar/mozaic.tif:
[testng] [2024-11-29 11:16:10,111] [pool-1-thread-9] Initializing /data/converted/markus/Confidence_ratio_image_PC12_neuroblastoma_Fura2_exp#9-2.tif:
[testng] [2024-11-29 11:18:01,715] [pool-1-thread-10] Initializing /data/converted/othmar/z-stack.tif:
[testng] [2024-11-29 11:18:35,553] [pool-1-thread-11] Initializing /data/converted/sebastien/F1.tif:
[testng] [2024-11-29 11:20:33,868] [pool-1-thread-4] Initializing /data/converted/thomas/test_axiocam_3_1.tif:
[testng] [2024-11-29 11:21:18,540] [pool-1-thread-8] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast.tif:
[testng] [2024-11-29 11:21:26,471] [pool-1-thread-4] Initializing /data/converted/converted/wtzer_series76_z003_ch00-with-rois.tif:
[testng] [2024-11-29 11:22:07,477] [pool-1-thread-4] Initializing /data/converted/jonas/10_0907_multidrug-0001_AB01_03.tif:
[testng] [2024-11-29 11:23:17,541] [pool-1-thread-7] Initializing /data/converted/dan/adultnr1.tif:
[testng] [2024-11-29 11:24:30,726] [pool-1-thread-11] Initializing /data/scott/Slide133-01.tif:
[testng] [2024-11-29 11:25:09,937] [pool-1-thread-7] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_3.tif:
[testng] [2024-11-29 11:25:18,831] [pool-1-thread-11] Initializing /data/converted/kelsey/1300x1030BW.tif:
[testng] [2024-11-29 11:25:21,233] [pool-1-thread-6] Initializing /data/converted/markus/HighSpeedParas.tif:
[testng] [2024-11-29 11:26:14,889] [pool-1-thread-11] Initializing /data/converted/eirinn/12_2_2009-16-hes5-brdu-proper_position(52).tif:
[testng] [2024-11-29 11:33:32,721] [pool-1-thread-11] Initializing /data/converted/jeffrey/750-30-03.tif:
[testng] [2024-11-29 11:34:44,377] [pool-1-thread-11] Initializing /data/converted/markus/HeLa-Reggie-GFP_ZT_fast-DCV-CI-measured-PSF.tif:
[testng] [2024-11-29 11:39:03,949] [pool-1-thread-5] Initializing /data/converted/vladan/vladan.tif:
[testng] [2024-11-29 11:39:35,639] [pool-1-thread-7] Initializing /data/converted/karsten/Bild2.tif:
[testng] [2024-11-29 11:40:28,113] [pool-1-thread-1] Initializing /data/converted/miso/Aufnahme-184058-0002.tif:
[testng] [2024-11-29 11:40:44,530] [pool-1-thread-7] Initializing /data/converted/dietmar/137.tif:
[testng] [2024-11-29 11:41:07,801] [pool-1-thread-8] Initializing /data/converted/converted/2chzt.tif:
[testng] [2024-11-29 11:41:12,234] [pool-1-thread-1] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_11.tif:
[testng] [2024-11-29 11:44:29,633] [pool-1-thread-10] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_2.tif:
[testng] [2024-11-29 11:48:30,168] [pool-1-thread-5] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast-sectioned.tif:
[testng] [2024-11-29 11:49:43,900] [pool-1-thread-9] Initializing /data/converted/markus/Hypocampus_Tiles_with_stiching.tif:
[testng] [2024-11-29 11:50:37,505] [pool-1-thread-4] Initializing /data/converted/markus/6ch-Z-stack_deconvolved.tif:
[testng] [2024-11-29 11:52:02,746] [pool-1-thread-7] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_6.tif:
[testng] [2024-11-29 11:52:41,171] [pool-1-thread-1] Initializing /data/converted/dietmar/hmads-bac1-bac7-af488-rho-af647_pre-2006-03-30-0016.tif:
[testng] [2024-11-29 11:53:57,852] [pool-1-thread-9] Initializing /data/converted/sebastien/test.tif:
[testng] [2024-11-29 11:56:03,206] [pool-1-thread-10] Initializing /data/converted/stephan/notok2.tif:
[testng] [2024-11-29 11:56:59,678] [pool-1-thread-3] Initializing /data/converted/markus/Branchiostoma_6x12_MosaiX_Tiles_color.tif:
[testng] [2024-11-29 11:57:27,133] [pool-1-thread-1] Initializing /data/converted/karsten/247096n3s3s9.tif:
[testng] [2024-11-29 11:59:04,245] [pool-1-thread-10] Initializing /data/converted/dietmar/hmads-24h-bac1-7-af647-af488-rho-1day-hyb-csk-2007-06-29-0008_position(113).tif:
[testng] [2024-11-29 12:00:50,645] [pool-1-thread-1] Initializing /data/converted/markus/PhaseGFP-MosaiX-Timelapse_Tiles.tif:
[testng] [2024-11-29 12:03:45,169] [pool-1-thread-7] Initializing /data/converted/michel/c.tif:
[testng] [2024-11-29 12:03:53,866] [pool-1-thread-2] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast-sidebyside.tif:
[testng] [2024-11-29 12:04:40,220] [pool-1-thread-7] Initializing /data/converted/rolf/example_2-2010_11_25.tif:
[testng] [2024-11-29 12:05:08,374] [pool-1-thread-5] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_9.tif:
[testng] [2024-11-29 12:05:19,888] [pool-1-thread-4] Initializing /data/converted/rachel/40K 30s A2.tif:
[testng] [2024-11-29 12:05:28,195] [pool-1-thread-7] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_16.tif:
[testng] [2024-11-29 12:06:12,789] [pool-1-thread-4] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_17.tif:
[testng] [2024-11-29 12:06:55,164] [pool-1-thread-9] Initializing /data/converted/markus/Mouse-newborn-panorama_JPEG_5percent_compressed.tif:
[testng] [2024-11-29 12:07:06,938] [pool-1-thread-3] Initializing /data/converted/michel/e.tif:
[testng] [2024-11-29 12:08:01,519] [pool-1-thread-9] Initializing /data/converted/nicolas/image.tif:
[testng] [2024-11-29 12:08:31,759] [pool-1-thread-3] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_5.tif:
[testng] [2024-11-29 12:08:40,122] [pool-1-thread-9] Initializing /data/converted/cecilia/day 1 naked nb positive 1-2007-0055.tif:
[testng] [2024-11-29 12:09:37,248] [pool-1-thread-9] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_23.tif:
[testng] [2024-11-29 12:10:17,839] [pool-1-thread-10] Initializing /data/converted/markus/30channels_exposure-series.tif:
[testng] [2024-11-29 12:13:51,875] [pool-1-thread-10] Initializing /data/converted/david/snap-181518-0001.tif:
[testng] [2024-11-29 12:14:36,990] [pool-1-thread-10] Initializing /data/converted/strand/2Colors1Plane.tif:
[testng] [2024-11-29 12:15:48,834] [pool-1-thread-1] Initializing /data/converted/darren/section0001_w1.tif:
[testng] [2024-11-29 12:16:05,105] [pool-1-thread-10] Initializing /data/converted/eirinn/demo-tile.tif:
[testng] [2024-11-29 12:16:14,359] [pool-1-thread-11] Initializing /data/converted/eirinn/5_6_2009-dj9-03_a01_01.tif:
[testng] [2024-11-29 12:16:28,163] [pool-1-thread-5] Initializing /data/converted/michel/a.tif:
[testng] [2024-11-29 12:16:33,905] [pool-1-thread-1] Initializing /data/converted/rachel/40K 30s A1.tif:
[testng] [2024-11-29 12:16:59,839] [pool-1-thread-5] Initializing /data/converted/joseph/E-2009_0022.tif:
[testng] [2024-11-29 12:17:04,682] [pool-1-thread-10] Initializing /data/converted/converted/damian-compressed.tif:
[testng] [2024-11-29 12:17:16,140] [pool-1-thread-1] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_19.tif:
[testng] [2024-11-29 12:17:18,445] [pool-1-thread-11] Initializing /data/converted/ville/MultiCh-RGB/pollen_rgb.tif:
[testng] [2024-11-29 12:17:25,040] [pool-1-thread-7] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_4.tif:
[testng] [2024-11-29 12:17:37,618] [pool-1-thread-10] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_22.tif:
[testng] [2024-11-29 12:17:52,892] [pool-1-thread-4] Initializing /data/converted/joseph/Alike_best_example_but_WORKS_FINE_maybe_cause_shorter_expose.tif:
[testng] [2024-11-29 12:17:59,534] [pool-1-thread-11] Initializing /data/converted/susan/BY4741NQ2.tif:
[testng] [2024-11-29 12:18:33,651] [pool-1-thread-11] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_18.tif:
[testng] [2024-11-29 12:18:47,298] [pool-1-thread-3] Initializing /data/converted/dietmar/dapi-texasred-0015.tif:
[testng] [2024-11-29 12:19:13,405] [pool-1-thread-2] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_25.tif:
[testng] [2024-11-29 12:20:06,175] [pool-1-thread-4] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_10.tif:
[testng] [2024-11-29 12:20:57,483] [pool-1-thread-9] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_15.tif:
[testng] [2024-11-29 12:25:49,206] [pool-1-thread-3] Initializing /data/converted/michel/b.tif:
[testng] [2024-11-29 12:25:55,572] [pool-1-thread-7] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_8.tif:
[testng] 12:26:21,199 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
[testng] 12:26:21,199 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 12:26:21,200 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-11-29_12-26-21.log]
[testng] 12:26:21,201 |-INFO in ch.qos.logback.core.sift.SiftProcessor@522967d7 - End of configuration.
[testng] [2024-11-29 12:26:30,790] [pool-1-thread-3] Initializing /data/converted/markus/Mouse-newborn-panorama_lossless_compressed.tif:
[testng] [2024-11-29 12:26:57,125] [pool-1-thread-10] Initializing /data/converted/michel/d.tif:
[testng] [2024-11-29 12:27:13,049] [pool-1-thread-1] Initializing /data/dorai/F_ZImage10_(X10)_C.tif:
[testng] [2024-11-29 12:27:20,073] [pool-1-thread-3] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_12.tif:
[testng] [2024-11-29 12:27:30,877] [pool-1-thread-10] Initializing /data/converted/markus/Mouse-newborn-panorama.tif:
[testng] [2024-11-29 12:27:45,376] [pool-1-thread-1] Initializing /data/qa-21570/20150421_HepG2_yH2AX_DAPI_0.5h_5GyDOWN_1512_cell04_SIR_ALX.dv_comp.tif:
[testng] [2024-11-29 12:27:58,608] [pool-1-thread-1] Initializing /data/converted/jonas/10_0907_multidrug-0001_AB01_08.tif:
[testng] [2024-11-29 12:28:10,089] [pool-1-thread-11] Initializing /data/converted/james/Sylvain_run3_1Gy_Live7-2008-0019.tif:
[testng] [2024-11-29 12:28:16,018] [pool-1-thread-8] Initializing /data/converted/markus/MosaiX_irregular_Z-stack_with_autofocus.tif:
[testng] [2024-11-29 12:28:22,277] [pool-1-thread-10] Initializing /data/converted/dietmar/hmads-bac1-bac7-af488-rho-af647_pre-2006-03-30-six.tif:
[testng] [2024-11-29 12:28:28,544] [pool-1-thread-4] Initializing /data/converted/stephan/notok1.tif:
[testng] [2024-11-29 12:29:01,954] [pool-1-thread-2] Initializing /data/qa-21570/250618_J1_diff_D3-2-0003.tif:
[testng] [2024-11-29 12:29:04,802] [pool-1-thread-5] Initializing /data/scott/Slide133-08.tif:
[testng] [2024-11-29 12:29:40,209] [pool-1-thread-2] Initializing /data/converted/othmar/mozaic.tif:
[testng] [2024-11-29 12:29:44,767] [pool-1-thread-5] Initializing /data/converted/ville/MultiCh-RGB/pollen_bw.tif:
[testng] [2024-11-29 12:30:09,799] [pool-1-thread-9] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_21.tif:
[testng] [2024-11-29 12:30:23,816] [pool-1-thread-5] Initializing /data/converted/lior/live+cf5b.tif:
[testng] 13:14:20,315 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
[testng] 13:14:20,315 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 13:14:20,318 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-11-29_13-14-20.log]
[testng] 13:14:20,318 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7c7a22d - End of configuration.
[testng] 13:17:51,466 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
[testng] 13:17:51,466 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 13:17:51,468 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-11-29_13-17-51.log]
[testng] 13:17:51,468 |-INFO in ch.qos.logback.core.sift.SiftProcessor@79059313 - End of configuration.
[testng]
[testng] ===============================================
[testng] Bio-Formats software test suite
[testng] Total tests run: 6625, Failures: 0, Skips: 0
[testng] ===============================================
[testng]
BUILD SUCCESSFUL
Total time: 149 minutes 40 seconds
Finished: SUCCESS