Started by upstream project "BIOFORMATS-test-repo" build number 275
originally caused by:
Started by upstream project "Trigger" build number 296
originally caused by:
Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder
[BIOFORMATS-test-folder] $ /bin/bash -xe /tmp/jenkins3372081342814916457.sh
+ '[' zeiss-tiff = slidebook ']'
++ date +%u
+ '[' 7 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_43416_merge_ci -v /uod/idr/repos/curated/zeiss-tiff:/data -v /uod/idr-scratch/merge-ci/curated/zeiss-tiff:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
[echo] isSnapshot = true
init-title:
[echo] ----------=========== bio-formats-testing-framework ===========----------
init-timestamp:
init:
copy-resources:
compile:
[resolver:resolve] Resolving artifacts
compile-tests:
[resolver:resolve] Resolving artifacts
[javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
[javac] warning: [options] bootstrap class path not set in conjunction with -source 8
[javac] 1 warning
test-automated:
[testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket
[testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket
[testng] File leak detector installed
[testng] 02:58:13,549 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
[testng] 02:58:13,550 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - No custom configurators were discovered as a service.
[testng] 02:58:13,550 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 02:58:13,551 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 02:58:13,552 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
[testng] 02:58:13,552 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
[testng] 02:58:13,552 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
[testng] 02:58:13,552 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 02:58:13,553 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 02:58:13,553 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
[testng] 02:58:13,554 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
[testng] 02:58:13,554 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
[testng] 02:58:13,719 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
[testng] 02:58:13,720 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
[testng] 02:58:13,743 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
[testng] 02:58:13,743 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
[testng] 02:58:13,748 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
[testng] 02:58:13,749 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
[testng] 02:58:13,749 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
[testng] 02:58:13,749 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
[testng] 02:58:13,749 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@2e3967ea - End of configuration.
[testng] 02:58:13,750 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@2e6a8155 - Registering current configuration as safe fallback point
[testng] 02:58:13,750 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 197 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
[testng] [2024-12-01 02:58:13,759] [main] java.version = 17.0.2
[testng] 02:58:13,763 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
[testng] 02:58:13,763 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:58:13,805 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-12-01_02-58-13.log]
[testng] 02:58:13,806 |-INFO in ch.qos.logback.core.sift.SiftProcessor@798162bc - End of configuration.
[testng] [2024-12-01 02:58:13,808] [main] testng.directory = /data
[testng] [2024-12-01 02:58:13,808] [main] testng.configDirectory = /config
[testng] [2024-12-01 02:58:13,817] [main] testng.multiplier = 1.0
[testng] [2024-12-01 02:58:13,817] [main] testng.in-memory = false
[testng] [2024-12-01 02:58:13,818] [main] testng.allow-missing = false
[testng] [2024-12-01 02:58:13,818] [main] user.language = en
[testng] [2024-12-01 02:58:13,818] [main] user.country = ${user.country}
[testng] [2024-12-01 02:58:13,818] [main] Maximum heap size = 15360 MB
[testng] Scanning for files...
[testng] [2024-12-01 02:59:10,988] [main] ----------------------------------------
[testng] [2024-12-01 02:59:10,988] [main] Total files: 15735
[testng] [2024-12-01 02:59:10,988] [main] Scan time: 57.17 s (3 ms/file)
[testng] [2024-12-01 02:59:10,988] [main] ----------------------------------------
[testng] Building list of tests...
[testng] Ready to test 125 files
[testng] [TestNG] Running:
[testng] Bio-Formats software test suite
[testng]
[testng] [2024-12-01 03:00:10,264] [pool-1-thread-1] Initializing /data/converted/ville/MultiCh-RGB/pollen_bw.tif:
[testng] 03:00:10,265 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
[testng] 03:00:10,265 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 03:00:10,266 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-12-01_03-00-10.log]
[testng] 03:00:10,267 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4f4ef725 - End of configuration.
[testng] [2024-12-01 03:00:10,630] [pool-1-thread-12] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_14.tif:
[testng] 03:00:10,630 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
[testng] 03:00:10,631 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 03:00:10,632 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-12-01_03-00-10.log]
[testng] 03:00:10,632 |-INFO in ch.qos.logback.core.sift.SiftProcessor@37ff939c - End of configuration.
[testng] [2024-12-01 03:00:11,705] [pool-1-thread-11] Initializing /data/converted/converted/damian.tif:
[testng] 03:00:11,705 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
[testng] 03:00:11,706 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 03:00:11,706 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-12-01_03-00-11.log]
[testng] 03:00:11,707 |-INFO in ch.qos.logback.core.sift.SiftProcessor@436f311f - End of configuration.
[testng] [2024-12-01 03:00:12,391] [pool-1-thread-10] Initializing /data/converted/jan/SampleStack_Mosaic4x5_comb.tif:
[testng] 03:00:12,391 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
[testng] 03:00:12,391 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 03:00:12,392 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-12-01_03-00-12.log]
[testng] 03:00:12,392 |-INFO in ch.qos.logback.core.sift.SiftProcessor@f1a324c - End of configuration.
[testng] [2024-12-01 03:00:14,070] [pool-1-thread-9] Initializing /data/converted/joseph/E-2009_0022.tif:
[testng] 03:00:14,070 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
[testng] 03:00:14,070 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 03:00:14,071 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-12-01_03-00-14.log]
[testng] 03:00:14,071 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6d896bc0 - End of configuration.
[testng] [2024-12-01 03:00:14,681] [pool-1-thread-8] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast-sectioned.tif:
[testng] 03:00:14,681 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
[testng] 03:00:14,681 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 03:00:14,682 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-12-01_03-00-14.log]
[testng] 03:00:14,682 |-INFO in ch.qos.logback.core.sift.SiftProcessor@14d1d5bf - End of configuration.
[testng] [2024-12-01 03:00:15,343] [pool-1-thread-7] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_6.tif:
[testng] 03:00:15,343 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
[testng] 03:00:15,343 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 03:00:15,344 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-12-01_03-00-15.log]
[testng] 03:00:15,344 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6fb8523a - End of configuration.
[testng] [2024-12-01 03:00:15,853] [pool-1-thread-6] Initializing /data/converted/sebastien/test.tif:
[testng] 03:00:15,854 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
[testng] 03:00:15,854 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 03:00:15,854 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-12-01_03-00-15.log]
[testng] 03:00:15,855 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2b5aa3a6 - End of configuration.
[testng] [2024-12-01 03:00:16,419] [pool-1-thread-5] Initializing /data/converted/eirinn/12_2_2009-16-hes5-brdu-proper_position(52).tif:
[testng] 03:00:16,419 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
[testng] 03:00:16,419 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 03:00:16,419 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-12-01_03-00-16.log]
[testng] 03:00:16,420 |-INFO in ch.qos.logback.core.sift.SiftProcessor@53823e0e - End of configuration.
[testng] [2024-12-01 03:00:16,838] [pool-1-thread-4] Initializing /data/othmar/mozaic.tif:
[testng] 03:00:16,838 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
[testng] 03:00:16,838 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 03:00:16,839 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-12-01_03-00-16.log]
[testng] 03:00:16,839 |-INFO in ch.qos.logback.core.sift.SiftProcessor@612c0260 - End of configuration.
[testng] [2024-12-01 03:00:17,238] [pool-1-thread-3] Initializing /data/converted/michel/b.tif:
[testng] 03:00:17,238 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
[testng] 03:00:17,238 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 03:00:17,239 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-12-01_03-00-17.log]
[testng] 03:00:17,239 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4c266dbc - End of configuration.
[testng] [2024-12-01 03:00:17,570] [pool-1-thread-2] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_4.tif:
[testng] 03:00:17,570 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
[testng] 03:00:17,570 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 03:00:17,570 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-12-01_03-00-17.log]
[testng] 03:00:17,571 |-INFO in ch.qos.logback.core.sift.SiftProcessor@43f76850 - End of configuration.
[testng] [2024-12-01 03:00:28,779] [pool-1-thread-11] Initializing /data/converted/dietmar/dapi-texasred-0015.tif:
[testng] [2024-12-01 03:00:34,150] [pool-1-thread-1] Initializing /data/converted/shalin/ibidiuslide1-timelapse3_mid2.tif:
[testng] [2024-12-01 03:00:35,054] [pool-1-thread-3] Initializing /data/converted/thomas/test_axiocam_3_1.tif:
[testng] [2024-12-01 03:00:51,893] [pool-1-thread-3] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_18.tif:
[testng] [2024-12-01 03:02:37,712] [pool-1-thread-5] Initializing /data/converted/markus/PC12_neuroblastoma_Fura2_exp#9.tif:
[testng] [2024-12-01 03:02:40,775] [pool-1-thread-4] Initializing /data/converted/karsten/247096n3s3s9.tif:
[testng] [2024-12-01 03:02:48,694] [pool-1-thread-1] Initializing /data/converted/kelsey/1300x1030BW.tif:
[testng] [2024-12-01 03:03:02,795] [pool-1-thread-1] Initializing /data/converted/michel/e.tif:
[testng] [2024-12-01 03:03:32,299] [pool-1-thread-1] Initializing /data/converted/dietmar/hmads-bac1-bac7-af488-rho-af647_pre-2006-03-30-six.tif:
[testng] [2024-12-01 03:03:48,919] [pool-1-thread-4] Initializing /data/converted/michel/a.tif:
[testng] [2024-12-01 03:03:51,478] [pool-1-thread-11] Initializing /data/converted/dan/zstack_convalaria.tif:
[testng] [2024-12-01 03:04:00,025] [pool-1-thread-4] Initializing /data/converted/dietmar/hmads-bac1-bac7-af488-rho-af647_pre-2006-03-30-0016.tif:
[testng] [2024-12-01 03:04:07,151] [pool-1-thread-11] Initializing /data/converted/dietmar/hmads-bac1-bac7-af488-rho-af647_pre-2006-03-30-ten.tif:
[testng] [2024-12-01 03:04:22,374] [pool-1-thread-2] Initializing /data/converted/eirinn/5_6_2009-dj9-03_a01_01.tif:
[testng] [2024-12-01 03:04:28,707] [pool-1-thread-7] Initializing /data/converted/kelsey/432x342BW.tif:
[testng] [2024-12-01 03:04:39,753] [pool-1-thread-7] Initializing /data/converted/rachel/40K 30s A2.tif:
[testng] [2024-12-01 03:04:44,216] [pool-1-thread-2] Initializing /data/converted/markus/Hypocampus_Tiles_with_stiching.tif:
[testng] [2024-12-01 03:04:47,430] [pool-1-thread-12] Initializing /data/converted/othmar/mozaic.tif:
[testng] [2024-12-01 03:04:56,777] [pool-1-thread-7] Initializing /data/converted/rachel/40K 30s A1.tif:
[testng] [2024-12-01 03:04:57,504] [pool-1-thread-6] Initializing /data/converted/stephan/notok1.tif:
[testng] [2024-12-01 03:05:14,651] [pool-1-thread-7] Initializing /data/converted/dietmar/hmads-24h-bac1-7-af647-af488-rho-1day-hyb-csk-2007-06-29-0008_position(113).tif:
[testng] [2024-12-01 03:05:23,285] [pool-1-thread-4] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_23.tif:
[testng] [2024-12-01 03:05:31,530] [pool-1-thread-3] Initializing /data/converted/eirinn/11_10_2009-01-lcstim-15-10-09_position(1).tif:
[testng] [2024-12-01 03:05:35,979] [pool-1-thread-1] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_25.tif:
[testng] [2024-12-01 03:05:56,406] [pool-1-thread-9] Initializing /data/converted/dan/adultnr1.tif:
[testng] [2024-12-01 03:05:58,470] [pool-1-thread-6] Initializing /data/converted/converted/2chzt.tif:
[testng] [2024-12-01 03:06:09,984] [pool-1-thread-8] Initializing /data/converted/markus/HighSpeedParas.tif:
[testng] [2024-12-01 03:06:13,640] [pool-1-thread-2] Initializing /data/converted/othmar/z-stack.tif:
[testng] [2024-12-01 03:06:16,543] [pool-1-thread-11] Initializing /data/converted/vladan/vladan.tif:
[testng] [2024-12-01 03:06:37,978] [pool-1-thread-9] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_15.tif:
[testng] [2024-12-01 03:06:57,753] [pool-1-thread-12] Initializing /data/converted/ville/MultiCh-RGB/pollen_rgb.tif:
[testng] [2024-12-01 03:07:15,593] [pool-1-thread-12] Initializing /data/converted/kelsey/650x514BW.tif:
[testng] [2024-12-01 03:07:27,458] [pool-1-thread-12] Initializing /data/converted/converted/damian-compressed.tif:
[testng] [2024-12-01 03:07:33,522] [pool-1-thread-3] Initializing /data/converted/markus/Confidence_ratio_image_PC12_neuroblastoma_Fura2_exp#9-2.tif:
[testng] [2024-12-01 03:07:41,403] [pool-1-thread-12] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_21.tif:
[testng] [2024-12-01 03:09:47,924] [pool-1-thread-7] Initializing /data/converted/markus/Branchiostoma_6x12_MosaiX_Tiles_color.tif:
[testng] [2024-12-01 03:10:22,906] [pool-1-thread-11] Initializing /data/converted/stephan/notok2.tif:
[testng] [2024-12-01 03:10:58,346] [pool-1-thread-4] Initializing /data/scott/Slide133-08.tif:
[testng] [2024-12-01 03:11:24,216] [pool-1-thread-1] Initializing /data/converted/cecilia/day 1 naked nb positive 1-2007-0055.tif:
[testng] [2024-12-01 03:11:25,906] [pool-1-thread-4] Initializing /data/converted/jonas/10_0907_multidrug-0001_AB01_03.tif:
[testng] [2024-12-01 03:12:01,181] [pool-1-thread-1] Initializing /data/converted/joseph/E-2009-0004.tif:
[testng] [2024-12-01 03:12:09,402] [pool-1-thread-11] Initializing /data/converted/markus/Material_color_image_HRc_microscanned_4x3K.tif:
[testng] [2024-12-01 03:12:36,077] [pool-1-thread-11] Initializing /data/converted/miso/Aufnahme-184058-0002.tif:
[testng] [2024-12-01 03:12:37,633] [pool-1-thread-9] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_2.tif:
[testng] [2024-12-01 03:13:00,447] [pool-1-thread-11] Initializing /data/converted/markus/HeLa-Reggie-GFP_ZT_fast-DCV-CI-measured-PSF.tif:
[testng] [2024-12-01 03:14:39,314] [pool-1-thread-12] Initializing /data/converted/markus/Smart_Experiment_4ch-T-time-stitched.tif:
[testng] [2024-12-01 03:16:21,996] [pool-1-thread-7] Initializing /data/converted/jonas/10_0907_multidrug-0001_AB01_08.tif:
[testng] [2024-12-01 03:18:47,675] [pool-1-thread-2] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_1.tif:
[testng] [2024-12-01 03:19:10,455] [pool-1-thread-10] Initializing /data/converted/markus/6ch-Z-stack_deconvolved.tif:
[testng] [2024-12-01 03:19:21,802] [pool-1-thread-9] Initializing /data/converted/markus/Long_TL_CElegans.tif:
[testng] [2024-12-01 03:20:10,758] [pool-1-thread-1] Initializing /data/converted/converted/wtzer_series76_z003_ch00.tif:
[testng] [2024-12-01 03:20:31,400] [pool-1-thread-1] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_8.tif:
[testng] [2024-12-01 03:24:07,265] [pool-1-thread-3] Initializing /data/converted/david/snap-181518-0001.tif:
[testng] [2024-12-01 03:24:29,956] [pool-1-thread-3] Initializing /data/converted/converted/mri-stack.tif:
[testng] [2024-12-01 03:24:32,752] [pool-1-thread-2] Initializing /data/converted/eirinn/demo-tile.tif:
[testng] [2024-12-01 03:24:50,022] [pool-1-thread-3] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_3.tif:
[testng] [2024-12-01 03:25:12,821] [pool-1-thread-2] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast-widefield.tif:
[testng] [2024-12-01 03:26:46,470] [pool-1-thread-4] Initializing /data/samples/mri-stack/mri-stack.tif:
[testng] [2024-12-01 03:27:10,088] [pool-1-thread-4] Initializing /data/converted/sebastien/F1.tif:
[testng] [2024-12-01 03:27:13,523] [pool-1-thread-1] Initializing /data/scott/Slide133-04.tif:
[testng] [2024-12-01 03:27:20,918] [pool-1-thread-10] Initializing /data/converted/converted/2chz.tif:
[testng] [2024-12-01 03:27:44,537] [pool-1-thread-1] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_11.tif:
[testng] [2024-12-01 03:29:28,812] [pool-1-thread-12] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_9.tif:
[testng] [2024-12-01 03:30:52,454] [pool-1-thread-10] Initializing /data/converted/karsten/Bild2.tif:
[testng] [2024-12-01 03:30:54,296] [pool-1-thread-5] Initializing /data/converted/markus/Mouse-newborn-panorama.tif:
[testng] [2024-12-01 03:31:07,547] [pool-1-thread-4] Initializing /data/converted/joseph/BEST_EXAMPLE_LONGER_EXPOSURE.tif:
[testng] [2024-12-01 03:31:31,828] [pool-1-thread-10] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_19.tif:
[testng] [2024-12-01 03:31:42,239] [pool-1-thread-5] Initializing /data/converted/converted/wtzer_series76_z003_ch00-with-rois.tif:
[testng] [2024-12-01 03:32:07,794] [pool-1-thread-5] Initializing /data/converted/michel/c.tif:
[testng] [2024-12-01 03:32:22,685] [pool-1-thread-7] Initializing /data/converted/strand/2Colors1Plane.tif:
[testng] [2024-12-01 03:32:30,378] [pool-1-thread-4] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_16.tif:
[testng] [2024-12-01 03:32:45,875] [pool-1-thread-5] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_22.tif:
[testng] [2024-12-01 03:32:51,618] [pool-1-thread-3] Initializing /data/converted/joseph/Alike_best_example_but_WORKS_FINE_maybe_cause_shorter_expose.tif:
[testng] [2024-12-01 03:33:20,015] [pool-1-thread-7] Initializing /data/converted/markus/MosaiX_irregular_Z-stack_with_autofocus.tif:
[testng] [2024-12-01 03:34:57,808] [pool-1-thread-3] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_12.tif:
[testng] [2024-12-01 03:35:21,362] [pool-1-thread-6] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_10.tif:
[testng] [2024-12-01 03:35:56,140] [pool-1-thread-1] Initializing /data/converted/joseph/E-2009-0001a.tif:
[testng] [2024-12-01 03:36:45,119] [pool-1-thread-2] Initializing /data/converted/dietmar/138.tif:
[testng] [2024-12-01 03:37:38,786] [pool-1-thread-12] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_24.tif:
[testng] [2024-12-01 03:38:41,503] [pool-1-thread-11] Initializing /data/converted/markus/PhaseGFP-MosaiX-Timelapse_Tiles.tif:
[testng] [2024-12-01 03:40:33,659] [pool-1-thread-10] Initializing /data/converted/dietmar/137.tif:
[testng] [2024-12-01 03:41:19,975] [pool-1-thread-4] Initializing /data/converted/james/Sylvain_run3_1Gy_Live7-2008-0019.tif:
[testng] [2024-12-01 03:41:24,840] [pool-1-thread-5] Initializing /data/converted/markus/Mouse-newborn-panorama_lossless_compressed.tif:
[testng] [2024-12-01 03:42:20,847] [pool-1-thread-5] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_17.tif:
[testng] [2024-12-01 03:43:08,415] [pool-1-thread-6] Initializing /data/converted/karsten/Bild1.tif:
[testng] [2024-12-01 03:43:22,083] [pool-1-thread-3] Initializing /data/converted/lior/live+cf2b.tif:
[testng] [2024-12-01 03:43:23,662] [pool-1-thread-4] Initializing /data/converted/markus/Brain_high_dynamic_range_imaging_Z-stack.tif:
[testng] [2024-12-01 03:43:45,231] [pool-1-thread-7] Initializing /data/converted/darren/section0001_w1.tif:
[testng] [2024-12-01 03:43:47,197] [pool-1-thread-6] Initializing /data/converted/susan/BY4741NQ2.tif:
[testng] [2024-12-01 03:44:15,047] [pool-1-thread-3] Initializing /data/converted/jeffrey/750-30-03.tif:
[testng] [2024-12-01 03:44:16,788] [pool-1-thread-7] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_13.tif:
[testng] [2024-12-01 03:44:18,621] [pool-1-thread-6] Initializing /data/scott/Slide133-11.tif:
[testng] [2024-12-01 03:44:43,138] [pool-1-thread-2] Initializing /data/converted/eirinn/pharm3-saline2-0147_11.tif:
[testng] [2024-12-01 03:44:47,059] [pool-1-thread-6] Initializing /data/converted/markus/Mouse-newborn-panorama_JPEG_5percent_compressed.tif:
[testng] [2024-12-01 03:44:54,902] [pool-1-thread-3] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast.tif:
[testng] [2024-12-01 03:45:34,971] [pool-1-thread-6] Initializing /data/qa-21570/250618_J1_diff_D3-2-0002.tif:
[testng] [2024-12-01 03:45:59,003] [pool-1-thread-6] Initializing /data/converted/monica/Monica_elegans_movie.tif:
[testng] [2024-12-01 03:46:08,367] [pool-1-thread-1] Initializing /data/converted/michel/d.tif:
[testng] [2024-12-01 03:46:11,977] [pool-1-thread-12] Initializing /data/converted/rolf/example_1-2010_11_25.tif:
[testng] [2024-12-01 03:46:40,465] [pool-1-thread-1] Initializing /data/qa-21570/250618_J1_diff_D3-2-0003.tif:
[testng] [2024-12-01 03:46:42,166] [pool-1-thread-12] Initializing /data/scott/Slide133-01.tif:
[testng] [2024-12-01 03:47:02,296] [pool-1-thread-4] Initializing /data/converted/eirinn/12_16_2009-01-tara-hd-triple-5to15_position(1)5.tif:
[testng] [2024-12-01 03:47:05,823] [pool-1-thread-1] Initializing /data/converted/lior/live+cf5b.tif:
[testng] [2024-12-01 03:47:10,616] [pool-1-thread-12] Initializing /data/converted/darren/section0002_w1.tif:
[testng] [2024-12-01 03:47:36,848] [pool-1-thread-12] Initializing /data/dorai/F_ZImage10_(X10)_C.tif:
[testng] [2024-12-01 03:47:48,558] [pool-1-thread-1] Initializing /data/converted/markus/30channels_exposure-series.tif:
[testng] [2024-12-01 03:48:02,458] [pool-1-thread-12] Initializing /data/qa-21570/250618_J1_diff_D3-2-0004.tif:
[testng] [2024-12-01 03:48:03,963] [pool-1-thread-10] Initializing /data/converted/rolf/example_2-2010_11_25.tif:
[testng] [2024-12-01 03:48:26,670] [pool-1-thread-12] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_5.tif:
[testng] [2024-12-01 03:48:31,703] [pool-1-thread-10] Initializing /data/converted/nicolas/image.tif:
[testng] [2024-12-01 03:48:44,391] [pool-1-thread-11] Initializing /data/qa-21570/20150421_HepG2_yH2AX_DAPI_0.5h_5GyDOWN_1512_cell04_SIR_ALX.dv_comp.tif:
[testng] [2024-12-01 03:48:54,753] [pool-1-thread-11] Initializing /data/converted/converted/deconvolve6_pseudo_tl000_zs000.tif:
[testng] [2024-12-01 03:48:57,455] [pool-1-thread-10] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast-sidebyside.tif:
[testng] 04:26:19,706 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
[testng] 04:26:19,706 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 04:26:19,706 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-12-01_04-26-19.log]
[testng] 04:26:19,707 |-INFO in ch.qos.logback.core.sift.SiftProcessor@41fc5625 - End of configuration.
[testng]
[testng] ===============================================
[testng] Bio-Formats software test suite
[testng] Total tests run: 6625, Failures: 0, Skips: 0
[testng] ===============================================
[testng]
BUILD SUCCESSFUL
Total time: 88 minutes 11 seconds
Finished: SUCCESS