Started by upstream project "BIOFORMATS-test-repo" build number 276 originally caused by: Started by upstream project "Trigger" build number 297 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@8 [BIOFORMATS-test-folder@8] $ /bin/bash -xe /tmp/jenkins18395003866683903728.sh + '[' zeiss-tiff = slidebook ']' ++ date +%u + '[' 1 -le 1 ']' + DOCKER_ARGS='-Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR' + sudo docker run --rm --name BIOFORMATS-test-folder_43580_merge_ci -v /uod/idr/repos/curated/zeiss-tiff:/data -v /uod/idr-scratch/merge-ci/curated/zeiss-tiff:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test test-automated: [testng] File leak detector installed [testng] 02:56:39,096 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 02:56:39,098 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - No custom configurators were discovered as a service. [testng] 02:56:39,098 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 02:56:39,099 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 02:56:39,099 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 02:56:39,099 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 02:56:39,100 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 02:56:39,100 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 02:56:39,100 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 02:56:39,100 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 02:56:39,101 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 02:56:39,101 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 02:56:39,324 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 02:56:39,324 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 02:56:39,352 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 02:56:39,352 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 02:56:39,360 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 02:56:39,360 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 02:56:39,360 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 02:56:39,361 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 02:56:39,361 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@7a69b07 - End of configuration. [testng] 02:56:39,362 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@636be97c - Registering current configuration as safe fallback point [testng] 02:56:39,362 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 262 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-12-02 02:56:39,372] [main] java.version = 1.8.0_342 [testng] 02:56:39,376 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 02:56:39,376 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:56:39,421 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-12-02_02-56-39.log] [testng] 02:56:39,423 |-INFO in ch.qos.logback.core.sift.SiftProcessor@13c9d689 - End of configuration. [testng] [2024-12-02 02:56:39,425] [main] testng.directory = /data [testng] [2024-12-02 02:56:39,425] [main] testng.configDirectory = /config [testng] [2024-12-02 02:56:39,437] [main] testng.multiplier = 1.0 [testng] [2024-12-02 02:56:39,437] [main] testng.in-memory = false [testng] [2024-12-02 02:56:39,438] [main] testng.allow-missing = false [testng] [2024-12-02 02:56:39,438] [main] user.language = fr [testng] [2024-12-02 02:56:39,438] [main] user.country = FR [testng] [2024-12-02 02:56:39,438] [main] Maximum heap size = 13653 MB [testng] Scanning for files... [testng] [2024-12-02 02:58:46,027] [main] ---------------------------------------- [testng] [2024-12-02 02:58:46,027] [main] Total files: 15735 [testng] [2024-12-02 02:58:46,027] [main] Scan time: 126.589 s (8 ms/file) [testng] [2024-12-02 02:58:46,028] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 125 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-12-02 03:00:36,742] [pool-1-thread-1] Initializing /data/converted/converted/mri-stack.tif: [testng] 03:00:36,743 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 03:00:36,743 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:00:36,744 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-12-02_03-00-36.log] [testng] 03:00:36,744 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2736d6da - End of configuration. [testng] [2024-12-02 03:00:37,633] [pool-1-thread-12] Initializing /data/converted/joseph/BEST_EXAMPLE_LONGER_EXPOSURE.tif: [testng] 03:00:37,633 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 03:00:37,633 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:00:37,634 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-12-02_03-00-37.log] [testng] 03:00:37,634 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6418f267 - End of configuration. [testng] [2024-12-02 03:00:38,461] [pool-1-thread-11] Initializing /data/converted/shalin/ibidiuslide1-timelapse3_mid2.tif: [testng] 03:00:38,461 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 03:00:38,461 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:00:38,462 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-12-02_03-00-38.log] [testng] 03:00:38,463 |-INFO in ch.qos.logback.core.sift.SiftProcessor@72de01c0 - End of configuration. [testng] [2024-12-02 03:00:39,076] [pool-1-thread-10] Initializing /data/converted/kelsey/432x342BW.tif: [testng] 03:00:39,077 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 03:00:39,077 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:00:39,077 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-12-02_03-00-39.log] [testng] 03:00:39,078 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5a9cbebf - End of configuration. [testng] [2024-12-02 03:00:39,793] [pool-1-thread-9] Initializing /data/converted/eirinn/pharm3-saline2-0147_11.tif: [testng] 03:00:39,793 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 03:00:39,793 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:00:39,794 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-12-02_03-00-39.log] [testng] 03:00:39,794 |-INFO in ch.qos.logback.core.sift.SiftProcessor@824b8cb - End of configuration. [testng] [2024-12-02 03:00:40,620] [pool-1-thread-8] Initializing /data/converted/converted/2chz.tif: [testng] 03:00:40,620 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 03:00:40,620 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:00:40,621 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-12-02_03-00-40.log] [testng] 03:00:40,621 |-INFO in ch.qos.logback.core.sift.SiftProcessor@47aede91 - End of configuration. [testng] [2024-12-02 03:00:41,384] [pool-1-thread-7] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_1.tif: [testng] 03:00:41,384 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 03:00:41,384 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:00:41,385 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-12-02_03-00-41.log] [testng] 03:00:41,385 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3a23561 - End of configuration. [testng] [2024-12-02 03:00:42,197] [pool-1-thread-6] Initializing /data/converted/dietmar/138.tif: [testng] 03:00:42,197 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 03:00:42,197 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:00:42,198 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-12-02_03-00-42.log] [testng] 03:00:42,198 |-INFO in ch.qos.logback.core.sift.SiftProcessor@33fb6796 - End of configuration. [testng] [2024-12-02 03:00:43,044] [pool-1-thread-5] Initializing /data/converted/jan/SampleStack_Mosaic4x5_comb.tif: [testng] 03:00:43,044 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 03:00:43,044 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:00:43,045 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-12-02_03-00-43.log] [testng] 03:00:43,045 |-INFO in ch.qos.logback.core.sift.SiftProcessor@254ecf2c - End of configuration. [testng] [2024-12-02 03:00:44,411] [pool-1-thread-4] Initializing /data/converted/markus/Brain_high_dynamic_range_imaging_Z-stack.tif: [testng] 03:00:44,411 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 03:00:44,411 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:00:44,412 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-12-02_03-00-44.log] [testng] 03:00:44,412 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5076541e - End of configuration. [testng] [2024-12-02 03:00:45,316] [pool-1-thread-3] Initializing /data/converted/kelsey/650x514BW.tif: [testng] 03:00:45,317 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 03:00:45,317 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:00:45,317 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-12-02_03-00-45.log] [testng] 03:00:45,317 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2b0e796b - End of configuration. [testng] [2024-12-02 03:00:46,158] [pool-1-thread-2] Initializing /data/converted/converted/damian.tif: [testng] 03:00:46,159 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 03:00:46,159 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:00:46,159 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-12-02_03-00-46.log] [testng] 03:00:46,160 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5c3ecd85 - End of configuration. [testng] [2024-12-02 03:01:02,447] [pool-1-thread-1] Initializing /data/converted/converted/deconvolve6_pseudo_tl000_zs000.tif: [testng] [2024-12-02 03:01:03,162] [pool-1-thread-10] Initializing /data/converted/dietmar/hmads-bac1-bac7-af488-rho-af647_pre-2006-03-30-ten.tif: [testng] [2024-12-02 03:01:04,041] [pool-1-thread-2] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_14.tif: [testng] [2024-12-02 03:01:05,023] [pool-1-thread-3] Initializing /data/scott/Slide133-04.tif: [testng] [2024-12-02 03:01:21,102] [pool-1-thread-1] Initializing /data/converted/karsten/Bild1.tif: [testng] [2024-12-02 03:01:26,250] [pool-1-thread-3] Initializing /data/converted/darren/section0002_w1.tif: [testng] [2024-12-02 03:01:35,097] [pool-1-thread-12] Initializing /data/converted/monica/Monica_elegans_movie.tif: [testng] [2024-12-02 03:01:45,182] [pool-1-thread-1] Initializing /data/converted/markus/Long_TL_CElegans.tif: [testng] [2024-12-02 03:01:51,431] [pool-1-thread-3] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast-widefield.tif: [testng] [2024-12-02 03:02:46,938] [pool-1-thread-8] Initializing /data/converted/dan/zstack_convalaria.tif: [testng] [2024-12-02 03:03:06,255] [pool-1-thread-11] Initializing /data/scott/Slide133-11.tif: [testng] [2024-12-02 03:03:09,306] [pool-1-thread-8] Initializing /data/converted/rolf/example_1-2010_11_25.tif: [testng] [2024-12-02 03:03:12,275] [pool-1-thread-4] Initializing /data/converted/lior/live+cf2b.tif: [testng] [2024-12-02 03:03:26,086] [pool-1-thread-8] Initializing /data/samples/mri-stack/mri-stack.tif: [testng] [2024-12-02 03:03:27,253] [pool-1-thread-11] Initializing /data/converted/eirinn/12_16_2009-01-tara-hd-triple-5to15_position(1)5.tif: [testng] [2024-12-02 03:03:38,746] [pool-1-thread-4] Initializing /data/qa-21570/250618_J1_diff_D3-2-0004.tif: [testng] [2024-12-02 03:03:41,932] [pool-1-thread-8] Initializing /data/converted/joseph/E-2009-0001a.tif: [testng] [2024-12-02 03:03:48,266] [pool-1-thread-10] Initializing /data/converted/markus/PC12_neuroblastoma_Fura2_exp#9.tif: [testng] [2024-12-02 03:03:57,391] [pool-1-thread-4] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_13.tif: [testng] [2024-12-02 03:04:49,410] [pool-1-thread-9] Initializing /data/qa-21570/250618_J1_diff_D3-2-0002.tif: [testng] [2024-12-02 03:05:04,876] [pool-1-thread-9] Initializing /data/converted/converted/wtzer_series76_z003_ch00.tif: [testng] [2024-12-02 03:05:09,639] [pool-1-thread-7] Initializing /data/converted/markus/Material_color_image_HRc_microscanned_4x3K.tif: [testng] [2024-12-02 03:05:21,959] [pool-1-thread-9] Initializing /data/converted/eirinn/11_10_2009-01-lcstim-15-10-09_position(1).tif: [testng] [2024-12-02 03:05:29,720] [pool-1-thread-6] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_24.tif: [testng] [2024-12-02 03:05:33,021] [pool-1-thread-7] Initializing /data/converted/joseph/E-2009-0004.tif: [testng] [2024-12-02 03:06:09,265] [pool-1-thread-2] Initializing /data/converted/markus/Smart_Experiment_4ch-T-time-stitched.tif: [testng] [2024-12-02 03:07:01,073] [pool-1-thread-11] Initializing /data/othmar/mozaic.tif: [testng] [2024-12-02 03:07:53,415] [pool-1-thread-9] Initializing /data/converted/markus/Confidence_ratio_image_PC12_neuroblastoma_Fura2_exp#9-2.tif: [testng] [2024-12-02 03:08:44,588] [pool-1-thread-3] Initializing /data/converted/othmar/z-stack.tif: [testng] [2024-12-02 03:08:58,416] [pool-1-thread-4] Initializing /data/converted/sebastien/F1.tif: [testng] [2024-12-02 03:09:46,940] [pool-1-thread-11] Initializing /data/converted/thomas/test_axiocam_3_1.tif: [testng] [2024-12-02 03:09:57,464] [pool-1-thread-8] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast.tif: [testng] [2024-12-02 03:10:07,410] [pool-1-thread-11] Initializing /data/converted/converted/wtzer_series76_z003_ch00-with-rois.tif: [testng] [2024-12-02 03:10:22,274] [pool-1-thread-11] Initializing /data/converted/jonas/10_0907_multidrug-0001_AB01_03.tif: [testng] [2024-12-02 03:10:47,107] [pool-1-thread-6] Initializing /data/converted/dan/adultnr1.tif: [testng] [2024-12-02 03:11:02,531] [pool-1-thread-4] Initializing /data/scott/Slide133-01.tif: [testng] [2024-12-02 03:11:16,705] [pool-1-thread-7] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_3.tif: [testng] [2024-12-02 03:11:19,206] [pool-1-thread-4] Initializing /data/converted/kelsey/1300x1030BW.tif: [testng] [2024-12-02 03:11:23,844] [pool-1-thread-6] Initializing /data/converted/markus/HighSpeedParas.tif: [testng] [2024-12-02 03:11:33,407] [pool-1-thread-4] Initializing /data/converted/eirinn/12_2_2009-16-hes5-brdu-proper_position(52).tif: [testng] [2024-12-02 03:13:24,223] [pool-1-thread-4] Initializing /data/converted/jeffrey/750-30-03.tif: [testng] [2024-12-02 03:13:40,996] [pool-1-thread-4] Initializing /data/converted/markus/HeLa-Reggie-GFP_ZT_fast-DCV-CI-measured-PSF.tif: [testng] [2024-12-02 03:15:08,291] [pool-1-thread-7] Initializing /data/converted/vladan/vladan.tif: [testng] [2024-12-02 03:15:18,243] [pool-1-thread-8] Initializing /data/converted/karsten/Bild2.tif: [testng] [2024-12-02 03:15:39,000] [pool-1-thread-2] Initializing /data/converted/miso/Aufnahme-184058-0002.tif: [testng] [2024-12-02 03:15:47,617] [pool-1-thread-8] Initializing /data/converted/dietmar/137.tif: [testng] [2024-12-02 03:16:02,484] [pool-1-thread-2] Initializing /data/converted/converted/2chzt.tif: [testng] [2024-12-02 03:16:38,199] [pool-1-thread-5] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_11.tif: [testng] [2024-12-02 03:17:47,986] [pool-1-thread-3] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_2.tif: [testng] [2024-12-02 03:20:02,776] [pool-1-thread-7] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast-sectioned.tif: [testng] [2024-12-02 03:20:17,728] [pool-1-thread-9] Initializing /data/converted/markus/Hypocampus_Tiles_with_stiching.tif: [testng] [2024-12-02 03:21:36,851] [pool-1-thread-11] Initializing /data/converted/markus/6ch-Z-stack_deconvolved.tif: [testng] [2024-12-02 03:21:56,966] [pool-1-thread-8] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_6.tif: [testng] [2024-12-02 03:22:23,268] [pool-1-thread-9] Initializing /data/converted/dietmar/hmads-bac1-bac7-af488-rho-af647_pre-2006-03-30-0016.tif: [testng] [2024-12-02 03:22:54,770] [pool-1-thread-5] Initializing /data/converted/sebastien/test.tif: [testng] [2024-12-02 03:24:06,037] [pool-1-thread-3] Initializing /data/converted/stephan/notok2.tif: [testng] [2024-12-02 03:24:53,480] [pool-1-thread-9] Initializing /data/converted/markus/Branchiostoma_6x12_MosaiX_Tiles_color.tif: [testng] [2024-12-02 03:25:45,314] [pool-1-thread-3] Initializing /data/converted/karsten/247096n3s3s9.tif: [testng] [2024-12-02 03:25:48,983] [pool-1-thread-1] Initializing /data/converted/dietmar/hmads-24h-bac1-7-af647-af488-rho-1day-hyb-csk-2007-06-29-0008_position(113).tif: [testng] [2024-12-02 03:27:41,921] [pool-1-thread-3] Initializing /data/converted/markus/PhaseGFP-MosaiX-Timelapse_Tiles.tif: [testng] [2024-12-02 03:28:14,791] [pool-1-thread-10] Initializing /data/converted/michel/c.tif: [testng] [2024-12-02 03:28:21,084] [pool-1-thread-8] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast-sidebyside.tif: [testng] [2024-12-02 03:28:48,680] [pool-1-thread-10] Initializing /data/converted/rolf/example_2-2010_11_25.tif: [testng] [2024-12-02 03:29:12,867] [pool-1-thread-7] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_9.tif: [testng] [2024-12-02 03:29:20,634] [pool-1-thread-10] Initializing /data/converted/rachel/40K 30s A2.tif: [testng] [2024-12-02 03:29:42,200] [pool-1-thread-11] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_16.tif: [testng] [2024-12-02 03:29:55,014] [pool-1-thread-10] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_17.tif: [testng] [2024-12-02 03:30:29,041] [pool-1-thread-5] Initializing /data/converted/markus/Mouse-newborn-panorama_JPEG_5percent_compressed.tif: [testng] [2024-12-02 03:31:20,246] [pool-1-thread-5] Initializing /data/converted/michel/e.tif: [testng] [2024-12-02 03:31:32,653] [pool-1-thread-9] Initializing /data/converted/nicolas/image.tif: [testng] [2024-12-02 03:32:01,891] [pool-1-thread-9] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_5.tif: [testng] [2024-12-02 03:32:27,309] [pool-1-thread-5] Initializing /data/converted/cecilia/day 1 naked nb positive 1-2007-0055.tif: [testng] [2024-12-02 03:33:17,913] [pool-1-thread-5] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_23.tif: [testng] [2024-12-02 03:33:25,376] [pool-1-thread-1] Initializing /data/converted/markus/30channels_exposure-series.tif: [testng] [2024-12-02 03:35:58,354] [pool-1-thread-1] Initializing /data/converted/david/snap-181518-0001.tif: [testng] [2024-12-02 03:36:28,925] [pool-1-thread-1] Initializing /data/converted/strand/2Colors1Plane.tif: [testng] [2024-12-02 03:37:04,542] [pool-1-thread-4] Initializing /data/converted/darren/section0001_w1.tif: [testng] [2024-12-02 03:37:24,583] [pool-1-thread-7] Initializing /data/converted/eirinn/demo-tile.tif: [testng] [2024-12-02 03:37:26,870] [pool-1-thread-1] Initializing /data/converted/eirinn/5_6_2009-dj9-03_a01_01.tif: [testng] [2024-12-02 03:37:34,902] [pool-1-thread-4] Initializing /data/converted/michel/a.tif: [testng] [2024-12-02 03:37:59,184] [pool-1-thread-4] Initializing /data/converted/rachel/40K 30s A1.tif: [testng] [2024-12-02 03:38:08,462] [pool-1-thread-3] Initializing /data/converted/joseph/E-2009_0022.tif: [testng] [2024-12-02 03:38:10,547] [pool-1-thread-7] Initializing /data/converted/converted/damian-compressed.tif: [testng] [2024-12-02 03:38:16,031] [pool-1-thread-1] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_19.tif: [testng] [2024-12-02 03:38:26,311] [pool-1-thread-11] Initializing /data/converted/ville/MultiCh-RGB/pollen_rgb.tif: [testng] [2024-12-02 03:38:35,047] [pool-1-thread-4] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_4.tif: [testng] [2024-12-02 03:38:36,910] [pool-1-thread-7] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_22.tif: [testng] [2024-12-02 03:38:38,704] [pool-1-thread-10] Initializing /data/converted/joseph/Alike_best_example_but_WORKS_FINE_maybe_cause_shorter_expose.tif: [testng] [2024-12-02 03:38:58,677] [pool-1-thread-11] Initializing /data/converted/susan/BY4741NQ2.tif: [testng] [2024-12-02 03:39:26,531] [pool-1-thread-11] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_18.tif: [testng] [2024-12-02 03:39:35,454] [pool-1-thread-8] Initializing /data/converted/dietmar/dapi-texasred-0015.tif: [testng] [2024-12-02 03:39:40,335] [pool-1-thread-9] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_25.tif: [testng] [2024-12-02 03:40:25,273] [pool-1-thread-10] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_10.tif: [testng] [2024-12-02 03:41:32,438] [pool-1-thread-5] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_15.tif: [testng] [2024-12-02 03:44:54,762] [pool-1-thread-8] Initializing /data/converted/michel/b.tif: [testng] [2024-12-02 03:45:08,048] [pool-1-thread-4] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_8.tif: [testng] [2024-12-02 03:45:31,224] [pool-1-thread-8] Initializing /data/converted/markus/Mouse-newborn-panorama_lossless_compressed.tif: [testng] [2024-12-02 03:45:53,550] [pool-1-thread-7] Initializing /data/converted/michel/d.tif: [testng] [2024-12-02 03:46:05,158] [pool-1-thread-1] Initializing /data/dorai/F_ZImage10_(X10)_C.tif: [testng] [2024-12-02 03:46:24,989] [pool-1-thread-8] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_12.tif: [testng] [2024-12-02 03:46:31,266] [pool-1-thread-7] Initializing /data/converted/markus/Mouse-newborn-panorama.tif: [testng] [2024-12-02 03:46:39,569] [pool-1-thread-1] Initializing /data/qa-21570/20150421_HepG2_yH2AX_DAPI_0.5h_5GyDOWN_1512_cell04_SIR_ALX.dv_comp.tif: [testng] [2024-12-02 03:46:52,158] [pool-1-thread-1] Initializing /data/converted/jonas/10_0907_multidrug-0001_AB01_08.tif: [testng] [2024-12-02 03:46:57,512] [pool-1-thread-2] Initializing /data/converted/james/Sylvain_run3_1Gy_Live7-2008-0019.tif: [testng] [2024-12-02 03:47:15,590] [pool-1-thread-10] Initializing /data/converted/markus/MosaiX_irregular_Z-stack_with_autofocus.tif: [testng] [2024-12-02 03:47:20,261] [pool-1-thread-11] Initializing /data/converted/dietmar/hmads-bac1-bac7-af488-rho-af647_pre-2006-03-30-six.tif: [testng] [2024-12-02 03:47:27,978] [pool-1-thread-7] Initializing /data/converted/stephan/notok1.tif: [testng] [2024-12-02 03:47:47,063] [pool-1-thread-9] Initializing /data/qa-21570/250618_J1_diff_D3-2-0003.tif: [testng] [2024-12-02 03:48:06,813] [pool-1-thread-3] Initializing /data/scott/Slide133-08.tif: [testng] [2024-12-02 03:48:18,146] [pool-1-thread-9] Initializing /data/converted/othmar/mozaic.tif: [testng] [2024-12-02 03:48:39,699] [pool-1-thread-3] Initializing /data/converted/ville/MultiCh-RGB/pollen_bw.tif: [testng] [2024-12-02 03:49:05,566] [pool-1-thread-2] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_21.tif: [testng] [2024-12-02 03:49:10,697] [pool-1-thread-3] Initializing /data/converted/lior/live+cf5b.tif: [testng] 04:22:47,806 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 04:22:47,806 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:22:47,807 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-12-02_04-22-47.log] [testng] 04:22:47,808 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3b93d874 - End of configuration. [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 6625, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 86 minutes 14 seconds Finished: SUCCESS