Started by upstream project "BIOFORMATS-test-repo" build number 277
originally caused by:
Started by upstream project "Trigger" build number 298
originally caused by:
Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@6
[BIOFORMATS-test-folder@6] $ /bin/bash -xe /tmp/jenkins7157071290148133452.sh
+ '[' sxm = slidebook ']'
++ date +%u
+ '[' 2 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_43704_merge_ci -v /uod/idr/repos/curated/sxm:/data -v /uod/idr-scratch/merge-ci/curated/sxm:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
[echo] isSnapshot = true
init-title:
[echo] ----------=========== bio-formats-testing-framework ===========----------
init-timestamp:
init:
copy-resources:
compile:
[resolver:resolve] Resolving artifacts
compile-tests:
[resolver:resolve] Resolving artifacts
[javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
[javac] warning: [options] bootstrap class path not set in conjunction with -source 8
[javac] 1 warning
test-automated:
[testng] WARNING: An illegal reflective access operation has occurred
[testng] WARNING: Illegal reflective access by org.kohsuke.file_leak_detector.Listener (file:/home/build/.m2/repository/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar) to field java.net.SocketImpl.socket
[testng] WARNING: Please consider reporting this to the maintainers of org.kohsuke.file_leak_detector.Listener
[testng] WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations
[testng] WARNING: All illegal access operations will be denied in a future release
[testng] File leak detector installed
[testng] 01:54:00,753 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
[testng] 01:54:00,755 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - No custom configurators were discovered as a service.
[testng] 01:54:00,755 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 01:54:00,757 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 01:54:00,758 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
[testng] 01:54:00,758 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
[testng] 01:54:00,758 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
[testng] 01:54:00,758 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 01:54:00,759 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 01:54:00,760 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
[testng] 01:54:00,760 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
[testng] 01:54:00,760 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
[testng] 01:54:00,965 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
[testng] 01:54:00,965 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
[testng] 01:54:00,989 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
[testng] 01:54:00,989 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
[testng] 01:54:00,995 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
[testng] 01:54:00,996 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
[testng] 01:54:00,996 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
[testng] 01:54:00,996 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
[testng] 01:54:00,996 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@45099dd3 - End of configuration.
[testng] 01:54:00,997 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@60099951 - Registering current configuration as safe fallback point
[testng] 01:54:00,997 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 238 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
[testng] [2024-12-03 01:54:01,007] [main] java.version = 11.0.16
[testng] 01:54:01,011 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
[testng] 01:54:01,011 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:54:01,054 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-12-03_01-54-01.log]
[testng] 01:54:01,056 |-INFO in ch.qos.logback.core.sift.SiftProcessor@21be3395 - End of configuration.
[testng] [2024-12-03 01:54:01,058] [main] testng.directory = /data
[testng] [2024-12-03 01:54:01,058] [main] testng.configDirectory = /config
[testng] [2024-12-03 01:54:01,070] [main] testng.multiplier = 1.0
[testng] [2024-12-03 01:54:01,072] [main] testng.in-memory = false
[testng] [2024-12-03 01:54:01,072] [main] testng.allow-missing = false
[testng] [2024-12-03 01:54:01,072] [main] user.language = en
[testng] [2024-12-03 01:54:01,072] [main] user.country = ${user.country}
[testng] [2024-12-03 01:54:01,072] [main] Maximum heap size = 15360 MB
[testng] Scanning for files...
[testng] [2024-12-03 01:56:45,190] [main] ----------------------------------------
[testng] [2024-12-03 01:56:45,190] [main] Total files: 268
[testng] [2024-12-03 01:56:45,190] [main] Scan time: 164.117 s (612 ms/file)
[testng] [2024-12-03 01:56:45,191] [main] ----------------------------------------
[testng] Building list of tests...
[testng] Ready to test 160 files
[testng] [TestNG] Running:
[testng] Bio-Formats software test suite
[testng]
[testng] [2024-12-03 02:01:13,430] [pool-1-thread-1] Initializing /data/steve/JEOL/WinSem (Sue)/RICK1.IMG:
[testng] 02:01:13,430 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
[testng] 02:01:13,431 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:01:13,433 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-12-03_02-01-13.log]
[testng] 02:01:13,433 |-INFO in ch.qos.logback.core.sift.SiftProcessor@250a4040 - End of configuration.
[testng] [2024-12-03 02:01:13,994] [pool-1-thread-12] Initializing /data/steve/Philips (Markus G)/135-33.IMG:
[testng] 02:01:13,995 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
[testng] 02:01:13,995 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:01:13,995 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-12-03_02-01-13.log]
[testng] 02:01:13,996 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4ef56b62 - End of configuration.
[testng] [2024-12-03 02:01:14,373] [pool-1-thread-11] Initializing /data/steve/Misc SXM test images/Stacks/Fred's stack:
[testng] 02:01:14,374 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
[testng] 02:01:14,374 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:01:14,374 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-12-03_02-01-14.log]
[testng] 02:01:14,375 |-INFO in ch.qos.logback.core.sift.SiftProcessor@cf5254 - End of configuration.
[testng] [2024-12-03 02:01:15,602] [pool-1-thread-10] Initializing /data/steve/TopoMetrix/Topo SFM (SC)/PA7.TFR:
[testng] 02:01:15,603 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
[testng] 02:01:15,603 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:01:15,604 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-12-03_02-01-15.log]
[testng] 02:01:15,604 |-INFO in ch.qos.logback.core.sift.SiftProcessor@39f6ab7a - End of configuration.
[testng] [2024-12-03 02:01:16,107] [pool-1-thread-9] Initializing /data/steve/Quesant Instr/Quesant v1.2 (Marc F)/afm3.afm:
[testng] 02:01:16,107 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
[testng] 02:01:16,107 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:01:16,107 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-12-03_02-01-16.log]
[testng] 02:01:16,108 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4d9be3f1 - End of configuration.
[testng] [2024-12-03 02:01:16,503] [pool-1-thread-8] Initializing /data/steve/TopoMetrix/Topo MFM (SC)/NDPOL-01.TFR:
[testng] 02:01:16,503 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
[testng] 02:01:16,503 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:01:16,504 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-12-03_02-01-16.log]
[testng] 02:01:16,504 |-INFO in ch.qos.logback.core.sift.SiftProcessor@39f49bb6 - End of configuration.
[testng] [2024-12-03 02:01:16,942] [pool-1-thread-7] Initializing /data/steve/TIFF/CONCRETE TIFF:
[testng] 02:01:16,942 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
[testng] 02:01:16,942 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:01:16,943 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-12-03_02-01-16.log]
[testng] 02:01:16,943 |-INFO in ch.qos.logback.core.sift.SiftProcessor@308dea72 - End of configuration.
[testng] [2024-12-03 02:01:18,439] [pool-1-thread-6] Initializing /data/steve/Philips (Markus G)/135-31.IMG:
[testng] 02:01:18,439 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
[testng] 02:01:18,440 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:01:18,440 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-12-03_02-01-18.log]
[testng] 02:01:18,440 |-INFO in ch.qos.logback.core.sift.SiftProcessor@698d9d53 - End of configuration.
[testng] [2024-12-03 02:01:18,767] [pool-1-thread-5] Initializing /data/steve/Quesant Instr/Quesant v1.2 (Marc F)/stm1.afm:
[testng] 02:01:18,767 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
[testng] 02:01:18,767 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:01:18,768 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-12-03_02-01-18.log]
[testng] 02:01:18,768 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3c0915c1 - End of configuration.
[testng] [2024-12-03 02:01:19,104] [pool-1-thread-4] Initializing /data/steve/FITS/M13.fits:
[testng] 02:01:19,105 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
[testng] 02:01:19,105 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:01:19,105 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-12-03_02-01-19.log]
[testng] 02:01:19,106 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6f32537f - End of configuration.
[testng] [2024-12-03 02:01:19,261] [pool-1-thread-3] Initializing /data/steve/JEOL/SPM (Hiroyuki Isobe)/HOPG.tif:
[testng] 02:01:19,261 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
[testng] 02:01:19,261 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:01:19,261 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-12-03_02-01-19.log]
[testng] 02:01:19,262 |-INFO in ch.qos.logback.core.sift.SiftProcessor@58bea10d - End of configuration.
[testng] [2024-12-03 02:01:20,669] [pool-1-thread-2] Initializing /data/steve/TIFF/Macrophage cell images/T08-08 1600 24-bit.tif:
[testng] 02:01:20,669 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
[testng] 02:01:20,669 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:01:20,669 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-12-03_02-01-20.log]
[testng] 02:01:20,670 |-INFO in ch.qos.logback.core.sift.SiftProcessor@266e47f5 - End of configuration.
[testng] [2024-12-03 02:01:24,927] [pool-1-thread-4] Initializing /data/steve/Zeiss LSM/Zeiss LSM (John S)/Zeiss LSM 2 samples:pixel/coltubfitc1.lsm:
[testng] [2024-12-03 02:01:27,040] [pool-1-thread-5] Initializing /data/steve/RHK Tech/RHK (Mark Flowers)/Demo04.sm2:
[testng] [2024-12-03 02:01:27,561] [pool-1-thread-8] Initializing /data/steve/TIFF/ta269 TIFF:
[testng] [2024-12-03 02:01:29,334] [pool-1-thread-10] Initializing /data/steve/JEOL/SPM (Hiroyuki Isobe)/990304j.tif:
[testng] [2024-12-03 02:01:31,296] [pool-1-thread-9] Initializing /data/steve/VG SAM (Karen)/BGND.DTI:
[testng] [2024-12-03 02:01:31,628] [pool-1-thread-12] Initializing /data/steve/Burleigh/Burleigh v2/Burleigh v2 (Phil W)/1_2h2_3.img:
[testng] [2024-12-03 02:01:33,452] [pool-1-thread-6] Initializing /data/steve/Zeiss LSM/Zeiss LSM (Ewald B)/FGD006.TIF:
[testng] [2024-12-03 02:01:38,313] [pool-1-thread-1] Initializing /data/steve/Gatan/Gatan Mac (Guy Mayor)/Digital Micrograph 2.5:
[testng] [2024-12-03 02:01:38,759] [pool-1-thread-9] Initializing /data/steve/JEOL/WinSem (Sue)/Shuttle tile ceramic/SHUTTLED.IMG:
[testng] [2024-12-03 02:01:39,573] [pool-1-thread-5] Initializing /data/steve/SM-Camera/W(110)+Fe,5nA,30min@110eV:
[testng] [2024-12-03 02:01:40,873] [pool-1-thread-3] Initializing /data/steve/TIFF/CD-ROM TIFF:
[testng] [2024-12-03 02:01:42,422] [pool-1-thread-4] Initializing /data/steve/Leica TCS (Keith B)/25_5BB.SXM:
[testng] [2024-12-03 02:01:43,499] [pool-1-thread-11] Initializing /data/steve/Gatan/Gatan (Sue D)/WOODLOUSE:
[testng] [2024-12-03 02:01:43,802] [pool-1-thread-7] Initializing /data/steve/Targa/Test.TGA:
[testng] [2024-12-03 02:01:44,264] [pool-1-thread-2] Initializing /data/steve/Zeiss LSM/Zeiss LSM (John S)/Zeiss LSM 1 sample:pixel/ug6proj3.lsm:
[testng] [2024-12-03 02:01:48,295] [pool-1-thread-11] Initializing /data/steve/RHK Tech/RHK (Bob Baker)/Examp_04.SM2:
[testng] [2024-12-03 02:01:48,969] [pool-1-thread-1] Initializing /data/steve/Philips (Markus G)/135-30.IMG:
[testng] [2024-12-03 02:01:49,895] [pool-1-thread-7] Initializing /data/steve/JEOL/WinSem (Sue)/TA.IMG:
[testng] [2024-12-03 02:01:50,562] [pool-1-thread-6] Initializing /data/steve/TopoMetrix/Topo MFM (SC)/NDR2-1.2FL:
[testng] [2024-12-03 02:01:51,125] [pool-1-thread-12] Initializing /data/steve/SBIG/M82 H 100s Tr=10s:
[testng] [2024-12-03 02:01:52,826] [pool-1-thread-8] Initializing /data/steve/Misc SXM test images/AVI movie/Clean Cu(110) LEED.avi:
[testng] [2024-12-03 02:01:53,069] [pool-1-thread-10] Initializing /data/steve/Gatan/Gatan TIFF/THE FLY 4 TIFF:
[testng] [2024-12-03 02:01:55,224] [pool-1-thread-2] Initializing /data/steve/Zeiss LSM/Zeiss LSM (John S)/Zeiss LSM 1 sample:pixel/ug6stack3.lsm:
[testng] [2024-12-03 02:01:58,034] [pool-1-thread-11] Initializing /data/steve/Gatan/Gatan (Sue D)/Honey Bee:
[testng] [2024-12-03 02:01:58,360] [pool-1-thread-1] Initializing /data/steve/JEOL/WinSem (Sue)/BALLS.IMG:
[testng] [2024-12-03 02:01:59,073] [pool-1-thread-9] Initializing /data/steve/JEOL/WinSem (Sue)/Shuttle tile ceramic/SHUTTLEC.IMG:
[testng] [2024-12-03 02:01:59,801] [pool-1-thread-8] Initializing /data/steve/Unisoku (Takashi)/Sample.HDR:
[testng] [2024-12-03 02:02:00,317] [pool-1-thread-4] Initializing /data/steve/Quesant Instr/Quesant v1.2 (Marc F)/afm2.afm:
[testng] [2024-12-03 02:02:00,637] [pool-1-thread-6] Initializing /data/steve/VG SAM (Karen)/PEAK.DTI:
[testng] [2024-12-03 02:02:01,053] [pool-1-thread-5] Initializing /data/steve/JEOL/SPM (Masashi N)/FFM204.TIF:
[testng] [2024-12-03 02:02:02,692] [pool-1-thread-3] Initializing /data/steve/RHK Tech/RHK (Oliver Leifeld)/SM02_08.SM2:
[testng] [2024-12-03 02:02:05,418] [pool-1-thread-7] Initializing /data/steve/Philips (Markus G)/302.TIF:
[testng] [2024-12-03 02:02:07,816] [pool-1-thread-11] Initializing /data/steve/Quesant Instr/Quesant v2.0 (Brad Taft)/03031004.afm:
[testng] [2024-12-03 02:02:08,311] [pool-1-thread-2] Initializing /data/steve/SBIG/M81 M 40s:
[testng] [2024-12-03 02:02:10,210] [pool-1-thread-6] Initializing /data/steve/Burleigh/Burleigh v2/Burleigh v2 (Phil W)/0_h4_3.img:
[testng] [2024-12-03 02:02:12,174] [pool-1-thread-4] Initializing /data/steve/RHK Tech/RHK (Mark Flowers)/Silicon.sm2:
[testng] [2024-12-03 02:02:12,649] [pool-1-thread-3] Initializing /data/steve/Gatan/Gatan (Sue D)/THE FLY A:
[testng] [2024-12-03 02:02:13,117] [pool-1-thread-10] Initializing /data/steve/Seiko Instr (Hwansoo)/05808001.xqd:
[testng] [2024-12-03 02:02:13,704] [pool-1-thread-12] Initializing /data/steve/TIFF/HAFF SEM:
[testng] [2024-12-03 02:02:16,589] [pool-1-thread-9] Initializing /data/steve/Bio-Rad (Nico Lindegger)/b.PIC:
[testng] [2024-12-03 02:02:17,303] [pool-1-thread-1] Initializing /data/steve/Misc SXM test images/Fake STM/Fake STM (4 rpts) TIFF:
[testng] [2024-12-03 02:02:19,012] [pool-1-thread-11] Initializing /data/steve/Zeiss LSM/Zeiss LSM (Ewald B)/NIALDIAN.TIF:
[testng] [2024-12-03 02:02:20,719] [pool-1-thread-5] Initializing /data/steve/Gatan/Gatan (Patrick Burton)/PDB_DARK_25k.dm2:
[testng] [2024-12-03 02:02:21,191] [pool-1-thread-3] Initializing /data/steve/RHK Tech/RHK (Bob Baker)/Examp_05.SM2:
[testng] [2024-12-03 02:02:22,286] [pool-1-thread-4] Initializing /data/steve/Burleigh/Burleigh v2/Graphite:
[testng] [2024-12-03 02:02:24,099] [pool-1-thread-10] Initializing /data/steve/FITS/M51.fits:
[testng] [2024-12-03 02:02:24,598] [pool-1-thread-7] Initializing /data/steve/JEOL/SPM (Hiroyuki Isobe)/990301c.tif:
[testng] [2024-12-03 02:02:26,488] [pool-1-thread-8] Initializing /data/steve/Misc SXM test images/Hough transform/Nathalie's test:
[testng] [2024-12-03 02:02:28,589] [pool-1-thread-2] Initializing /data/steve/Misc SXM test images/Stacks/DoF test stack (Ahnelt):
[testng] [2024-12-03 02:02:30,769] [pool-1-thread-5] Initializing /data/steve/Gatan/Gatan TIFF/Si CHIP TIFF:
[testng] [2024-12-03 02:02:32,207] [pool-1-thread-12] Initializing /data/steve/Bio-Rad (Nico Lindegger)/a.PIC:
[testng] [2024-12-03 02:02:33,080] [pool-1-thread-6] Initializing /data/steve/TIFF/Macrophage cell images/RT1-f-24 1600 24-bit.tif:
[testng] [2024-12-03 02:02:34,216] [pool-1-thread-9] Initializing /data/steve/Oxford Instr (Yoshimasa)/80619a.top:
[testng] [2024-12-03 02:02:34,528] [pool-1-thread-3] Initializing /data/steve/TIFF/Macrophage cell images/T48-44 800 24-bit.tif:
[testng] [2024-12-03 02:02:36,075] [pool-1-thread-10] Initializing /data/steve/JEOL/JSM (Inger Ekvell)/g11@0.IMG:
[testng] [2024-12-03 02:02:36,677] [pool-1-thread-1] Initializing /data/steve/RHK Tech/RHK (Bob Baker)/Examp_02.SM2:
[testng] [2024-12-03 02:02:37,076] [pool-1-thread-11] Initializing /data/steve/Gatan/Gatan PC (Eric Leroy)/Iron map 10.dm3:
[testng] [2024-12-03 02:02:39,892] [pool-1-thread-11] Initializing /data/steve/Molecular Imaging/Mol Imag v5.2 (Steve Higgins)/015.STP:
[testng] [2024-12-03 02:02:41,153] [pool-1-thread-9] Initializing /data/steve/Philips (Markus G)/135-32.IMG:
[testng] [2024-12-03 02:02:41,736] [pool-1-thread-4] Initializing /data/steve/Misc SXM test images/Chromosome images/HKGmaizeMei3.pict:
[testng] [2024-12-03 02:02:42,208] [pool-1-thread-1] Initializing /data/steve/TIFF/ta123 stack TIFF:
[testng] [2024-12-03 02:02:43,733] [pool-1-thread-10] Initializing /data/steve/Molecular Imaging/Mol Imag v4.18 (Reinat)/car-mac-con-g_003.STP:
[testng] [2024-12-03 02:02:44,309] [pool-1-thread-12] Initializing /data/steve/Gatan/Gatan PC (Eric Leroy)/BF super alliage.dm3:
[testng] [2024-12-03 02:02:44,648] [pool-1-thread-8] Initializing /data/steve/TIFF/Little owl TIFF:
[testng] [2024-12-03 02:02:46,175] [pool-1-thread-7] Initializing /data/steve/FITS/Meade DSI/M31bR1.fts:
[testng] [2024-12-03 02:02:47,376] [pool-1-thread-2] Initializing /data/steve/JEOL/SPM (Masashi N)/AFM204.TIF:
[testng] [2024-12-03 02:02:48,793] [pool-1-thread-11] Initializing /data/steve/TopoMetrix/Topo STM v4 (Gabriella)/159HF02.ZFP:
[testng] [2024-12-03 02:02:49,550] [pool-1-thread-12] Initializing /data/steve/Gatan/TEM (Larry Thomas)/TEM 10 KX:
[testng] [2024-12-03 02:02:49,958] [pool-1-thread-5] Initializing /data/steve/TopoMetrix/Topo STM v5 (Ewald B)/c80-50.zfr:
[testng] [2024-12-03 02:02:50,447] [pool-1-thread-3] Initializing /data/steve/Misc SXM test images/Fake STM/Fake STM (8 rpts) TIFF:
[testng] [2024-12-03 02:02:51,962] [pool-1-thread-4] Initializing /data/steve/Philips (Markus G)/302.IMG:
[testng] [2024-12-03 02:02:52,306] [pool-1-thread-6] Initializing /data/steve/Seiko Instr (Hwansoo)/05808001-2.xqd:
[testng] [2024-12-03 02:02:52,654] [pool-1-thread-9] Initializing /data/steve/Misc SXM test images/BMP images/m20_p.bmp:
[testng] [2024-12-03 02:02:52,738] [pool-1-thread-10] Initializing /data/steve/JPK Instr (Christian L)/Anti-reflex-coating.jpk:
[testng] [2024-12-03 02:02:53,722] [pool-1-thread-7] Initializing /data/steve/Misc SXM test images/Hough transform/Dale's bubbles:
[testng] [2024-12-03 02:02:55,967] [pool-1-thread-9] Initializing /data/steve/TopoMetrix/Topo STM v5 (Ewald B)/c80-50zfr.tif:
[testng] [2024-12-03 02:02:57,649] [pool-1-thread-12] Initializing /data/steve/Zeiss LSM/Zeiss LSM - 2 samp:pix (??)/16bcutagain.lsm:
[testng] [2024-12-03 02:02:58,404] [pool-1-thread-11] Initializing /data/steve/Burleigh/Burleigh v2/Burleigh v2 (Phil W)/0_h4_4.img:
[testng] [2024-12-03 02:02:59,970] [pool-1-thread-1] Initializing /data/steve/UBM (Rosset)/SG2.PR3:
[testng] [2024-12-03 02:03:00,947] [pool-1-thread-6] Initializing /data/steve/Gatan/Gatan (Patrick Burton)/PDB_DARK_25k.dm3:
[testng] [2024-12-03 02:03:01,609] [pool-1-thread-4] Initializing /data/steve/Gatan/Gatan (Sue D)/THE FLY 3:
[testng] [2024-12-03 02:03:01,962] [pool-1-thread-5] Initializing /data/steve/Quesant Instr/Quesant v1.2 (Marc F)/stm3.afm:
[testng] [2024-12-03 02:03:02,452] [pool-1-thread-8] Initializing /data/steve/TopoMetrix/Topo SFM (SC)/IM_P1.TFR:
[testng] [2024-12-03 02:03:03,227] [pool-1-thread-10] Initializing /data/steve/JEOL/SPM (Hiroyuki Isobe)/JEOL3.tif:
[testng] [2024-12-03 02:03:05,963] [pool-1-thread-2] Initializing /data/steve/TopoMetrix/Topo SFM (SC)/FFT test:
[testng] [2024-12-03 02:03:07,528] [pool-1-thread-3] Initializing /data/steve/Gatan/Gatan (Sue D)/SEM 500X (Larry):
[testng] [2024-12-03 02:03:07,783] [pool-1-thread-6] Initializing /data/steve/Gatan/Gatan TIFF/BALL TIFF:
[testng] [2024-12-03 02:03:09,398] [pool-1-thread-12] Initializing /data/steve/Hamamatsu (Keith B)/HIS-12bit-2b.HIS:
[testng] [2024-12-03 02:03:09,721] [pool-1-thread-1] Initializing /data/steve/Zeiss LSM/Zeiss LSM (John S)/Zeiss LSM 2 samples:pixel/coltubfitc1proj.lsm:
[testng] [2024-12-03 02:03:10,486] [pool-1-thread-7] Initializing /data/steve/Gatan/Gatan PC (Eric Leroy)/Oxygen map 1.dm3:
[testng] [2024-12-03 02:03:10,719] [pool-1-thread-4] Initializing /data/steve/RHK Tech/RHK (Bob Baker)/Examp_01.SM2:
[testng] [2024-12-03 02:03:11,362] [pool-1-thread-8] Initializing /data/steve/FITS/Meade DSI/M31bB1.fts:
[testng] [2024-12-03 02:03:11,820] [pool-1-thread-9] Initializing /data/steve/Oxford Instr (Yoshimasa)/98042103.TIF:
[testng] [2024-12-03 02:03:13,387] [pool-1-thread-5] Initializing /data/steve/Quesant Instr/Quesant v2.0 (Hal E)/03-17-05A.afm:
[testng] [2024-12-03 02:03:14,865] [pool-1-thread-11] Initializing /data/steve/Quesant Instr/Quesant v2.0 (Brad Taft)/03031020.afm:
[testng] [2024-12-03 02:03:15,385] [pool-1-thread-8] Initializing /data/steve/Quesant Instr/Quesant v2.0 (Hal E)/2-18-05A.afm:
[testng] [2024-12-03 02:03:15,808] [pool-1-thread-3] Initializing /data/steve/RHK Tech/RHK (Mark Flowers)/Demo07.sm2:
[testng] [2024-12-03 02:03:16,815] [pool-1-thread-7] Initializing /data/steve/FITS/Meade DSI/M31bG1.fts:
[testng] [2024-12-03 02:03:17,412] [pool-1-thread-4] Initializing /data/steve/JEOL/WinSem (Sue)/SIC2.IMG:
[testng] [2024-12-03 02:03:18,137] [pool-1-thread-12] Initializing /data/steve/Hamamatsu (Keith B)/HIS-12bit-3.HIS:
[testng] [2024-12-03 02:03:18,919] [pool-1-thread-5] Initializing /data/steve/TopoMetrix/Topo SFM (SC)/PA2.TFR:
[testng] [2024-12-03 02:03:19,510] [pool-1-thread-1] Initializing /data/steve/Molecular Imaging/Mol Imag v4.19 (Michael Z)/Wafer_vesicles_2min_010.STP:
[testng] [2024-12-03 02:03:20,166] [pool-1-thread-11] Initializing /data/steve/TIFF/Macrophage cell images/T24-24 1600 36_48-bit.tif:
[testng] [2024-12-03 02:03:21,826] [pool-1-thread-2] Initializing /data/steve/TopoMetrix/Topo STM v5 (Ewald B)/c80-50ffr.tif:
[testng] [2024-12-03 02:03:23,225] [pool-1-thread-10] Initializing /data/steve/FITS/M104.fits:
[testng] [2024-12-03 02:03:23,333] [pool-1-thread-8] Initializing /data/steve/RHK Tech/RHK-XPM Pro (Lydie L)/B70417000Q.SM3:
[testng] [2024-12-03 02:03:23,671] [pool-1-thread-6] Initializing /data/steve/TIFF/Macrophage cell images/Pre-d-0 1392 36-bit.tif:
[testng] [2024-12-03 02:03:24,367] [pool-1-thread-7] Initializing /data/steve/Misc SXM test images/Chromosome images/HKGmaizeMitose5.pict:
[testng] [2024-12-03 02:03:25,031] [pool-1-thread-3] Initializing /data/steve/RHK Tech/RHK (Bob Baker)/Examp_03.SM2:
[testng] [2024-12-03 02:03:25,574] [pool-1-thread-9] Initializing /data/steve/Hamamatsu (Keith B)/HIS-16bit-nopack.HIS:
[testng] [2024-12-03 02:03:26,973] [pool-1-thread-10] Initializing /data/steve/JEOL/WinSem (Sue)/Shuttle tile ceramic/SHUTTLEE.IMG:
[testng] [2024-12-03 02:03:27,839] [pool-1-thread-12] Initializing /data/steve/Quesant Instr/Quesant v1.2 (Marc F)/afm1.afm:
[testng] [2024-12-03 02:03:28,359] [pool-1-thread-5] Initializing /data/steve/Burleigh/Burleigh v1/Burleigh.IMG:
[testng] [2024-12-03 02:03:30,031] [pool-1-thread-1] Initializing /data/steve/Gatan/Gatan (Sue D)/THE FLY 2:
[testng] [2024-12-03 02:03:30,314] [pool-1-thread-7] Initializing /data/steve/JEOL/WinSem (Sue)/CONCRETE.IMG:
[testng] [2024-12-03 02:03:30,899] [pool-1-thread-8] Initializing /data/steve/RHK Tech/RHK STS (Peter Sloan)/B50303AS.SM2:
[testng] [2024-12-03 02:03:31,412] [pool-1-thread-4] Initializing /data/steve/SBIG/M81 H 250s Tr=5s:
[testng] [2024-12-03 02:03:33,275] [pool-1-thread-3] Initializing /data/steve/Hamamatsu (Keith B)/HIS-16bit-packed.HIS:
[testng] [2024-12-03 02:03:33,769] [pool-1-thread-9] Initializing /data/steve/JEOL/WinSem (Sue)/Shuttle tile ceramic/SHUTTLEB.IMG:
[testng] [2024-12-03 02:03:35,184] [pool-1-thread-12] Initializing /data/steve/RHK Tech/RHK-XPM Pro (Lydie L)/B70417000K.SM3:
[testng] [2024-12-03 02:03:36,933] [pool-1-thread-1] Initializing /data/steve/Gatan/Gatan Mac (Guy Mayor)/Digital Micrograph 3.4:
[testng] [2024-12-03 02:03:37,622] [pool-1-thread-8] Initializing /data/steve/Hamamatsu (Keith B)/HIS-12bit-1a.HIS:
[testng] [2024-12-03 02:03:38,028] [pool-1-thread-10] Initializing /data/steve/TIFF/Hough test TIFF:
[testng] [2024-12-03 02:03:39,212] [pool-1-thread-6] Initializing /data/steve/Misc SXM test images/Chromosome images/HRhuman1.pict:
[testng] [2024-12-03 02:03:39,560] [pool-1-thread-2] Initializing /data/steve/SM-Camera/Orhan + IPES rig:
[testng] [2024-12-03 02:03:41,298] [pool-1-thread-3] Initializing /data/steve/TIFF/8MAR03A.TIFF:
[testng] [2024-12-03 02:03:42,878] [pool-1-thread-11] Initializing /data/steve/Molecular Imaging/Mol Imag v4.18 (Reinat)/npc-liq-sharO_003.STP:
[testng] [2024-12-03 02:03:43,834] [pool-1-thread-5] Initializing /data/steve/JEOL/SEM (Steve Foulds)/IPS2000.DAT:
[testng] [2024-12-03 02:03:45,018] [pool-1-thread-1] Initializing /data/steve/Seiko Instr (Hwansoo)/05808002.xqf:
[testng] [2024-12-03 02:03:45,549] [pool-1-thread-7] Initializing /data/steve/Gatan/Gatan (Sue D)/THE FLY:
[testng] [2024-12-03 02:03:46,243] [pool-1-thread-12] Initializing /data/steve/Molecular Imaging/Mol Imag v5.2 (Steve Higgins)/014.STP:
[testng] [2024-12-03 02:03:47,211] [pool-1-thread-6] Initializing /data/steve/RHK Tech/RHK STS (Peter Sloan)/SloanSpec.SM2:
[testng] [2024-12-03 02:03:47,740] [pool-1-thread-4] Initializing /data/steve/RHK Tech/RHK IV (Koji N)/02042603.sm2:
[testng] [2024-12-03 02:03:48,245] [pool-1-thread-11] Initializing /data/steve/Hamamatsu (Keith B)/HIS-8bit.HIS:
[testng] [2024-12-03 02:03:48,661] [pool-1-thread-9] Initializing /data/steve/Leica TCS (Keith B)/25_5BJ.SXM:
[testng] [2024-12-03 02:03:49,683] [pool-1-thread-8] Initializing /data/steve/Misc SXM test images/Chromosome images/Chironomus2.pict:
[testng] [2024-12-03 02:03:50,989] [pool-1-thread-7] Initializing /data/steve/JEOL/WinSem (Sue)/Shuttle tile ceramic/SHUTTLEA.IMG:
[testng] [2024-12-03 02:03:51,773] [pool-1-thread-1] Initializing /data/steve/Seiko Instr (Hwansoo)/05808001-3.xqd:
[testng] [2024-12-03 02:03:52,338] [pool-1-thread-5] Initializing /data/steve/Molecular Imaging/Mol Imag v5.0 (Lionel S)/Cu#18-NaOH-035.STP:
[testng] [2024-12-03 02:03:52,866] [pool-1-thread-12] Initializing /data/steve/TopoMetrix/Topo STM (Liam McD)/GRID1.TFR:
[testng] [2024-12-03 02:03:53,408] [pool-1-thread-4] Initializing /data/steve/Oxford Instr (Yoshimasa)/98042103.top:
[testng] [2024-12-03 02:03:53,823] [pool-1-thread-6] Initializing /data/steve/Quesant Instr/Quesant v1.2 (Marc F)/stm2.afm:
[testng] [2024-12-03 02:03:54,861] [pool-1-thread-10] Initializing /data/steve/JPK Instr (Christian L)/Virus.jpk:
[testng] [2024-12-03 02:03:55,548] [pool-1-thread-2] Initializing /data/steve/TopoMetrix/Topo STM v5 (Ewald B)/c80-50.ffr:
[testng] [2024-12-03 02:03:55,917] [pool-1-thread-3] Initializing /data/steve/TIFF/Macrophage cell images/D1-A-1 1392 36-bit.tif:
[testng] [2024-12-03 02:03:56,461] [pool-1-thread-8] Initializing /data/steve/JPK Instr (Christian L)/Titanium-implant.jpk:
[testng] [2024-12-03 02:03:57,242] [pool-1-thread-11] Initializing /data/steve/Molecular Imaging/Mol Imag v4.18 (Reinat)/TwoDots.STP:
[testng] [2024-12-03 02:03:58,762] [pool-1-thread-1] Initializing /data/steve/RHK Tech/RHK (Bob Baker)/SCREEN1.PICT:
[testng]
[testng] ===============================================
[testng] Bio-Formats software test suite
[testng] Total tests run: 8480, Failures: 0, Skips: 0
[testng] ===============================================
[testng]
BUILD SUCCESSFUL
Total time: 10 minutes 6 seconds
Finished: SUCCESS