Started by upstream project "BIOFORMATS-test-repo" build number 32
originally caused by:
 Started by upstream project "Trigger" build number 36
 originally caused by:
  Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@8
[BIOFORMATS-test-folder@8] $ /bin/bash -xe /tmp/jenkins1615008701064514737.sh
+ '[' imagepro = slidebook ']'
++ date +%u
+ '[' 6 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_4394_merge_ci -v /uod/idr/repos/curated/imagepro:/data -v /uod/idr-scratch/merge-ci/curated/imagepro:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
     [echo] isSnapshot = true

init-title:
     [echo] ----------=========== bio-formats-testing-framework ===========----------

init-timestamp:

init:

copy-resources:

compile:
[resolver:resolve] Resolving artifacts

compile-tests:
[resolver:resolve] Resolving artifacts
    [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
    [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
    [javac] 1 warning

test-automated:
   [testng] WARNING: An illegal reflective access operation has occurred
   [testng] WARNING: Illegal reflective access by org.kohsuke.file_leak_detector.Listener (file:/home/build/.m2/repository/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar) to field java.net.SocketImpl.socket
   [testng] WARNING: Please consider reporting this to the maintainers of org.kohsuke.file_leak_detector.Listener
   [testng] WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations
   [testng] WARNING: All illegal access operations will be denied in a future release
   [testng] File leak detector installed
   [testng] 02:51:20,107 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
   [testng] 02:51:20,109 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - No custom configurators were discovered as a service.
   [testng] 02:51:20,109 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 02:51:20,110 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 02:51:20,111 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
   [testng] 02:51:20,111 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
   [testng] 02:51:20,112 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 2 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
   [testng] 02:51:20,112 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 02:51:20,112 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 02:51:20,113 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
   [testng] 02:51:20,113 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
   [testng] 02:51:20,114 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
   [testng] 02:51:20,335 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
   [testng] 02:51:20,335 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
   [testng] 02:51:20,375 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
   [testng] 02:51:20,375 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
   [testng] 02:51:20,387 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
   [testng] 02:51:20,387 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
   [testng] 02:51:20,387 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
   [testng] 02:51:20,388 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
   [testng] 02:51:20,388 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@2794eab6 - End of configuration.
   [testng] 02:51:20,389 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@6c1a5b54 - Registering current configuration as safe fallback point
   [testng] 02:51:20,389 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 277 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
   [testng] [2024-04-13 02:51:20,401] [main] java.version = 11.0.16
   [testng] 02:51:20,405 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
   [testng] 02:51:20,405 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:51:20,456 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-04-13_02-51-20.log]
   [testng] 02:51:20,458 |-INFO in ch.qos.logback.core.sift.SiftProcessor@642a7222 - End of configuration.
   [testng] [2024-04-13 02:51:20,461] [main] testng.directory = /data
   [testng] [2024-04-13 02:51:20,462] [main] testng.configDirectory = /config
   [testng] [2024-04-13 02:51:20,474] [main] testng.multiplier = 1.0
   [testng] [2024-04-13 02:51:20,476] [main] testng.in-memory = false
   [testng] [2024-04-13 02:51:20,476] [main] testng.allow-missing = false
   [testng] [2024-04-13 02:51:20,477] [main] user.language = en
   [testng] [2024-04-13 02:51:20,477] [main] user.country = ${user.country}
   [testng] [2024-04-13 02:51:20,477] [main] Maximum heap size = 15360 MB
   [testng] Scanning for files...
   [testng] [2024-04-13 02:51:21,937] [main] ----------------------------------------
   [testng] [2024-04-13 02:51:21,937] [main] Total files: 22
   [testng] [2024-04-13 02:51:21,937] [main] Scan time: 1.46 s (66 ms/file)
   [testng] [2024-04-13 02:51:21,938] [main] ----------------------------------------
   [testng] Building list of tests...
   [testng] Ready to test 21 files
   [testng] [TestNG] Running:
   [testng]   Bio-Formats software test suite
   [testng] 
   [testng] [2024-04-13 02:51:29,696] [pool-1-thread-1] Initializing /data/xiuwen/head2.seq: 
   [testng] 02:51:29,697 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
   [testng] 02:51:29,697 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:51:29,698 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-04-13_02-51-29.log]
   [testng] 02:51:29,699 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3c6cd47f - End of configuration.
   [testng] [2024-04-13 02:51:29,842] [pool-1-thread-12] Initializing /data/converted/dub01.pic: 
   [testng] 02:51:29,843 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
   [testng] 02:51:29,843 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:51:29,855 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-04-13_02-51-29.log]
   [testng] 02:51:29,855 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5517552 - End of configuration.
   [testng] [2024-04-13 02:51:29,913] [pool-1-thread-11] Initializing /data/converted/clown.tif: 
   [testng] 02:51:29,913 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
   [testng] 02:51:29,913 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:51:29,914 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-04-13_02-51-29.log]
   [testng] 02:51:29,915 |-INFO in ch.qos.logback.core.sift.SiftProcessor@674a4ec7 - End of configuration.
   [testng] [2024-04-13 02:51:29,935] [pool-1-thread-10] Initializing /data/samples/PROBE.TIF: 
   [testng] 02:51:29,935 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
   [testng] 02:51:29,935 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:51:29,936 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-04-13_02-51-29.log]
   [testng] 02:51:29,937 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6a30a3b6 - End of configuration.
   [testng] [2024-04-13 02:51:29,966] [pool-1-thread-9] Initializing /data/converted/mitosis-test.ipw: 
   [testng] 02:51:29,967 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
   [testng] 02:51:29,967 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:51:29,967 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-04-13_02-51-29.log]
   [testng] 02:51:29,968 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6a801470 - End of configuration.
   [testng] [2024-04-13 02:51:30,017] [pool-1-thread-8] Initializing /data/converted/clown8c.tif: 
   [testng] 02:51:30,017 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
   [testng] 02:51:30,017 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:51:30,018 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-04-13_02-51-30.log]
   [testng] 02:51:30,019 |-INFO in ch.qos.logback.core.sift.SiftProcessor@439da44d - End of configuration.
   [testng] [2024-04-13 02:51:30,059] [pool-1-thread-7] Initializing /data/converted/mitosis-test.tif: 
   [testng] 02:51:30,059 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
   [testng] 02:51:30,060 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:51:30,060 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-04-13_02-51-30.log]
   [testng] 02:51:30,061 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5dcdc8b2 - End of configuration.
   [testng] [2024-04-13 02:51:30,241] [pool-1-thread-6] Initializing /data/alex/AFAset0003.ips: 
   [testng] 02:51:30,242 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
   [testng] 02:51:30,242 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:51:30,243 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-04-13_02-51-30.log]
   [testng] 02:51:30,243 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3dce2da6 - End of configuration.
   [testng] [2024-04-13 02:51:30,260] [pool-1-thread-5] Initializing /data/converted/dub01.ipw: 
   [testng] 02:51:30,261 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
   [testng] 02:51:30,261 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:51:30,262 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-04-13_02-51-30.log]
   [testng] 02:51:30,263 |-INFO in ch.qos.logback.core.sift.SiftProcessor@ce848d3 - End of configuration.
   [testng] [2024-04-13 02:51:30,317] [pool-1-thread-4] Initializing /data/converted/clown.seq: 
   [testng] 02:51:30,317 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
   [testng] 02:51:30,317 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:51:30,318 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-04-13_02-51-30.log]
   [testng] 02:51:30,318 |-INFO in ch.qos.logback.core.sift.SiftProcessor@201b597d - End of configuration.
   [testng] [2024-04-13 02:51:30,336] [pool-1-thread-3] Initializing /data/converted/NESb_C2_TP7.ipw: 
   [testng] 02:51:30,336 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
   [testng] 02:51:30,336 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:51:30,337 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-04-13_02-51-30.log]
   [testng] 02:51:30,337 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5f40e557 - End of configuration.
   [testng] [2024-04-13 02:51:30,380] [pool-1-thread-2] Initializing /data/converted/clown.ipw: 
   [testng] 02:51:30,380 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
   [testng] 02:51:30,381 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:51:30,382 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-04-13_02-51-30.log]
   [testng] 02:51:30,382 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5e8a4f - End of configuration.
   [testng] [2024-04-13 02:51:32,802] [pool-1-thread-8] Initializing /data/converted/mitosis-test.seq: 
   [testng] [2024-04-13 02:51:32,842] [pool-1-thread-10] Initializing /data/samples/FLDUAL.TIF: 
   [testng] [2024-04-13 02:51:32,876] [pool-1-thread-9] Initializing /data/converted/NESb_C2_TP7.tiff: 
   [testng] [2024-04-13 02:51:32,945] [pool-1-thread-2] Initializing /data/samples/HEART.SEQ: 
   [testng] [2024-04-13 02:51:32,973] [pool-1-thread-4] Initializing /data/converted/clown8c.seq: 
   [testng] [2024-04-13 02:51:32,986] [pool-1-thread-11] Initializing /data/converted/dub01.seq: 
   [testng] [2024-04-13 02:51:33,026] [pool-1-thread-12] Initializing /data/converted/clown8c.ipw: 
   [testng] [2024-04-13 02:51:33,046] [pool-1-thread-5] Initializing /data/samples/TISSUE.TIF: 
   [testng] [2024-04-13 02:51:33,079] [pool-1-thread-7] Initializing /data/converted/NESb_C2_TP7.seq: 
   [testng] 
   [testng] ===============================================
   [testng] Bio-Formats software test suite
   [testng] Total tests run: 1113, Failures: 0, Skips: 0
   [testng] ===============================================
   [testng] 

BUILD SUCCESSFUL
Total time: 30 seconds
Finished: SUCCESS