Started by upstream project "BIOFORMATS-test-repo" build number 280 originally caused by: Started by upstream project "Trigger" build number 300 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@5 [BIOFORMATS-test-folder@5] $ /bin/bash -xe /tmp/jenkins10828800216763564425.sh + '[' zeiss-tiff = slidebook ']' ++ date +%u + '[' 4 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_44236_merge_ci -v /uod/idr/repos/curated/zeiss-tiff:/data -v /uod/idr-scratch/merge-ci/curated/zeiss-tiff:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] warning: [options] source value 8 is obsolete and will be removed in a future release [javac] warning: [options] target value 8 is obsolete and will be removed in a future release [javac] warning: [options] To suppress warnings about obsolete options, use -Xlint:-options. [javac] 4 warnings test-automated: [testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket [testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket [testng] File leak detector installed [testng] 04:05:00,476 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 04:05:00,478 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - No custom configurators were discovered as a service. [testng] 04:05:00,478 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 04:05:00,479 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 04:05:00,479 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 04:05:00,479 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 04:05:00,480 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 04:05:00,480 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 04:05:00,480 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 04:05:00,481 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 04:05:00,481 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 04:05:00,481 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 04:05:00,642 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 04:05:00,643 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 04:05:00,668 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 04:05:00,668 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 04:05:00,674 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 04:05:00,675 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 04:05:00,675 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 04:05:00,675 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 04:05:00,675 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@29215f06 - End of configuration. [testng] 04:05:00,676 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@b9b00e0 - Registering current configuration as safe fallback point [testng] 04:05:00,676 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 196 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-12-05 04:05:00,685] [main] java.version = 21 [testng] 04:05:00,688 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 04:05:00,688 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:05:00,732 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-12-05_04-05-00.log] [testng] 04:05:00,733 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1b919693 - End of configuration. [testng] [2024-12-05 04:05:00,735] [main] testng.directory = /data [testng] [2024-12-05 04:05:00,735] [main] testng.configDirectory = /config [testng] [2024-12-05 04:05:00,744] [main] testng.multiplier = 1.0 [testng] [2024-12-05 04:05:00,745] [main] testng.in-memory = false [testng] [2024-12-05 04:05:00,745] [main] testng.allow-missing = false [testng] [2024-12-05 04:05:00,745] [main] user.language = en [testng] [2024-12-05 04:05:00,745] [main] user.country = ${user.country} [testng] [2024-12-05 04:05:00,745] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2024-12-05 04:07:28,465] [main] ---------------------------------------- [testng] [2024-12-05 04:07:28,466] [main] Total files: 15735 [testng] [2024-12-05 04:07:28,466] [main] Scan time: 147.72 s (9 ms/file) [testng] [2024-12-05 04:07:28,466] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 125 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-12-05 04:09:10,062] [pool-1-thread-1] Initializing /data/converted/markus/PC12_neuroblastoma_Fura2_exp#9.tif: [testng] 04:09:10,063 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 04:09:10,063 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:09:10,064 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-12-05_04-09-10.log] [testng] 04:09:10,065 |-INFO in ch.qos.logback.core.sift.SiftProcessor@483d1b79 - End of configuration. [testng] [2024-12-05 04:09:10,824] [pool-1-thread-12] Initializing /data/converted/joseph/E-2009_0022.tif: [testng] 04:09:10,824 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 04:09:10,824 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:09:10,825 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-12-05_04-09-10.log] [testng] 04:09:10,825 |-INFO in ch.qos.logback.core.sift.SiftProcessor@101f6833 - End of configuration. [testng] [2024-12-05 04:09:12,646] [pool-1-thread-11] Initializing /data/samples/mri-stack/mri-stack.tif: [testng] 04:09:12,646 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 04:09:12,646 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:09:12,647 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-12-05_04-09-12.log] [testng] 04:09:12,648 |-INFO in ch.qos.logback.core.sift.SiftProcessor@75985c42 - End of configuration. [testng] [2024-12-05 04:09:13,202] [pool-1-thread-10] Initializing /data/converted/monica/Monica_elegans_movie.tif: [testng] 04:09:13,202 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 04:09:13,203 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:09:13,203 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-12-05_04-09-13.log] [testng] 04:09:13,204 |-INFO in ch.qos.logback.core.sift.SiftProcessor@250475be - End of configuration. [testng] [2024-12-05 04:09:15,612] [pool-1-thread-9] Initializing /data/converted/dan/zstack_convalaria.tif: [testng] 04:09:15,612 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 04:09:15,612 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:09:15,613 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-12-05_04-09-15.log] [testng] 04:09:15,613 |-INFO in ch.qos.logback.core.sift.SiftProcessor@32147c9b - End of configuration. [testng] [2024-12-05 04:09:15,935] [pool-1-thread-8] Initializing /data/converted/lior/live+cf5b.tif: [testng] 04:09:15,935 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 04:09:15,935 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:09:15,936 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-12-05_04-09-15.log] [testng] 04:09:15,936 |-INFO in ch.qos.logback.core.sift.SiftProcessor@67b2b86 - End of configuration. [testng] [2024-12-05 04:09:16,309] [pool-1-thread-7] Initializing /data/scott/Slide133-01.tif: [testng] 04:09:16,309 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 04:09:16,310 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:09:16,310 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-12-05_04-09-16.log] [testng] 04:09:16,311 |-INFO in ch.qos.logback.core.sift.SiftProcessor@27efc7a3 - End of configuration. [testng] [2024-12-05 04:09:16,781] [pool-1-thread-6] Initializing /data/scott/Slide133-04.tif: [testng] 04:09:16,782 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 04:09:16,782 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:09:16,783 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-12-05_04-09-16.log] [testng] 04:09:16,783 |-INFO in ch.qos.logback.core.sift.SiftProcessor@69dbe386 - End of configuration. [testng] [2024-12-05 04:09:17,710] [pool-1-thread-5] Initializing /data/converted/markus/Brain_high_dynamic_range_imaging_Z-stack.tif: [testng] 04:09:17,710 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 04:09:17,710 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:09:17,711 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-12-05_04-09-17.log] [testng] 04:09:17,711 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5193d478 - End of configuration. [testng] [2024-12-05 04:09:18,762] [pool-1-thread-4] Initializing /data/converted/jeffrey/750-30-03.tif: [testng] 04:09:18,762 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 04:09:18,762 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:09:18,763 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-12-05_04-09-18.log] [testng] 04:09:18,763 |-INFO in ch.qos.logback.core.sift.SiftProcessor@116c617 - End of configuration. [testng] [2024-12-05 04:09:19,378] [pool-1-thread-3] Initializing /data/qa-21570/250618_J1_diff_D3-2-0004.tif: [testng] 04:09:19,378 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 04:09:19,379 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:09:19,379 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-12-05_04-09-19.log] [testng] 04:09:19,380 |-INFO in ch.qos.logback.core.sift.SiftProcessor@51f47228 - End of configuration. [testng] [2024-12-05 04:09:19,752] [pool-1-thread-2] Initializing /data/scott/Slide133-08.tif: [testng] 04:09:19,752 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 04:09:19,752 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:09:19,753 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-12-05_04-09-19.log] [testng] 04:09:19,753 |-INFO in ch.qos.logback.core.sift.SiftProcessor@60bcad75 - End of configuration. [testng] [2024-12-05 04:09:34,392] [pool-1-thread-11] Initializing /data/converted/michel/c.tif: [testng] [2024-12-05 04:09:35,387] [pool-1-thread-3] Initializing /data/converted/dietmar/hmads-bac1-bac7-af488-rho-af647_pre-2006-03-30-ten.tif: [testng] [2024-12-05 04:09:37,587] [pool-1-thread-7] Initializing /data/converted/markus/Mouse-newborn-panorama.tif: [testng] [2024-12-05 04:09:38,316] [pool-1-thread-6] Initializing /data/converted/converted/damian.tif: [testng] [2024-12-05 04:09:39,509] [pool-1-thread-2] Initializing /data/converted/converted/deconvolve6_pseudo_tl000_zs000.tif: [testng] [2024-12-05 04:09:42,171] [pool-1-thread-4] Initializing /data/converted/eirinn/12_2_2009-16-hes5-brdu-proper_position(52).tif: [testng] [2024-12-05 04:09:43,210] [pool-1-thread-9] Initializing /data/converted/sebastien/F1.tif: [testng] [2024-12-05 04:09:50,896] [pool-1-thread-8] Initializing /data/converted/rachel/40K 30s A2.tif: [testng] [2024-12-05 04:09:56,536] [pool-1-thread-6] Initializing /data/converted/eirinn/12_16_2009-01-tara-hd-triple-5to15_position(1)5.tif: [testng] [2024-12-05 04:09:58,151] [pool-1-thread-2] Initializing /data/converted/kelsey/1300x1030BW.tif: [testng] [2024-12-05 04:10:00,775] [pool-1-thread-11] Initializing /data/converted/markus/Branchiostoma_6x12_MosaiX_Tiles_color.tif: [testng] [2024-12-05 04:10:11,211] [pool-1-thread-7] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast.tif: [testng] [2024-12-05 04:10:14,126] [pool-1-thread-8] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_2.tif: [testng] [2024-12-05 04:10:15,424] [pool-1-thread-2] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_24.tif: [testng] [2024-12-05 04:11:44,624] [pool-1-thread-5] Initializing /data/converted/markus/Hypocampus_Tiles_with_stiching.tif: [testng] [2024-12-05 04:12:00,691] [pool-1-thread-9] Initializing /data/scott/Slide133-11.tif: [testng] [2024-12-05 04:12:14,482] [pool-1-thread-4] Initializing /data/converted/rachel/40K 30s A1.tif: [testng] [2024-12-05 04:12:22,391] [pool-1-thread-9] Initializing /data/converted/markus/PhaseGFP-MosaiX-Timelapse_Tiles.tif: [testng] [2024-12-05 04:12:26,005] [pool-1-thread-3] Initializing /data/converted/thomas/test_axiocam_3_1.tif: [testng] [2024-12-05 04:12:42,428] [pool-1-thread-4] Initializing /data/converted/converted/wtzer_series76_z003_ch00.tif: [testng] [2024-12-05 04:12:52,597] [pool-1-thread-3] Initializing /data/converted/michel/b.tif: [testng] [2024-12-05 04:13:02,146] [pool-1-thread-4] Initializing /data/converted/converted/2chzt.tif: [testng] [2024-12-05 04:13:26,149] [pool-1-thread-3] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_23.tif: [testng] [2024-12-05 04:13:51,519] [pool-1-thread-5] Initializing /data/converted/joseph/BEST_EXAMPLE_LONGER_EXPOSURE.tif: [testng] [2024-12-05 04:14:08,438] [pool-1-thread-6] Initializing /data/converted/karsten/Bild2.tif: [testng] [2024-12-05 04:15:01,848] [pool-1-thread-6] Initializing /data/converted/dan/adultnr1.tif: [testng] [2024-12-05 04:15:31,652] [pool-1-thread-5] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_19.tif: [testng] [2024-12-05 04:15:44,034] [pool-1-thread-11] Initializing /data/converted/joseph/E-2009-0001a.tif: [testng] [2024-12-05 04:16:24,433] [pool-1-thread-6] Initializing /data/converted/markus/Smart_Experiment_4ch-T-time-stitched.tif: [testng] [2024-12-05 04:17:15,085] [pool-1-thread-8] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast-sectioned.tif: [testng] [2024-12-05 04:18:11,983] [pool-1-thread-2] Initializing /data/converted/karsten/Bild1.tif: [testng] [2024-12-05 04:19:05,137] [pool-1-thread-12] Initializing /data/converted/dietmar/dapi-texasred-0015.tif: [testng] [2024-12-05 04:19:12,753] [pool-1-thread-2] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_1.tif: [testng] [2024-12-05 04:21:20,620] [pool-1-thread-7] Initializing /data/converted/nicolas/image.tif: [testng] [2024-12-05 04:21:53,727] [pool-1-thread-7] Initializing /data/converted/james/Sylvain_run3_1Gy_Live7-2008-0019.tif: [testng] [2024-12-05 04:24:20,662] [pool-1-thread-3] Initializing /data/converted/dietmar/137.tif: [testng] [2024-12-05 04:24:23,794] [pool-1-thread-7] Initializing /data/converted/eirinn/pharm3-saline2-0147_11.tif: [testng] [2024-12-05 04:24:57,361] [pool-1-thread-9] Initializing /data/qa-21570/250618_J1_diff_D3-2-0003.tif: [testng] [2024-12-05 04:25:31,259] [pool-1-thread-9] Initializing /data/converted/markus/Mouse-newborn-panorama_JPEG_5percent_compressed.tif: [testng] [2024-12-05 04:26:29,085] [pool-1-thread-9] Initializing /data/converted/rolf/example_1-2010_11_25.tif: [testng] [2024-12-05 04:26:43,061] [pool-1-thread-12] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_22.tif: [testng] [2024-12-05 04:26:51,297] [pool-1-thread-5] Initializing /data/converted/markus/Long_TL_CElegans.tif: [testng] [2024-12-05 04:27:04,514] [pool-1-thread-9] Initializing /data/converted/converted/mri-stack.tif: [testng] [2024-12-05 04:27:32,130] [pool-1-thread-9] Initializing /data/converted/michel/a.tif: [testng] [2024-12-05 04:28:01,967] [pool-1-thread-9] Initializing /data/converted/sebastien/test.tif: [testng] [2024-12-05 04:28:13,527] [pool-1-thread-2] Initializing /data/converted/dietmar/hmads-bac1-bac7-af488-rho-af647_pre-2006-03-30-six.tif: [testng] [2024-12-05 04:28:27,096] [pool-1-thread-11] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_3.tif: [testng] [2024-12-05 04:31:21,242] [pool-1-thread-8] Initializing /data/converted/ville/MultiCh-RGB/pollen_rgb.tif: [testng] [2024-12-05 04:32:03,730] [pool-1-thread-8] Initializing /data/othmar/mozaic.tif: [testng] [2024-12-05 04:32:35,255] [pool-1-thread-7] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_13.tif: [testng] [2024-12-05 04:33:39,625] [pool-1-thread-2] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_16.tif: [testng] [2024-12-05 04:33:49,338] [pool-1-thread-3] Initializing /data/converted/rolf/example_2-2010_11_25.tif: [testng] [2024-12-05 04:34:26,851] [pool-1-thread-3] Initializing /data/converted/converted/2chz.tif: [testng] [2024-12-05 04:36:43,719] [pool-1-thread-12] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_4.tif: [testng] [2024-12-05 04:37:08,909] [pool-1-thread-8] Initializing /data/converted/kelsey/650x514BW.tif: [testng] [2024-12-05 04:37:46,957] [pool-1-thread-8] Initializing /data/dorai/F_ZImage10_(X10)_C.tif: [testng] [2024-12-05 04:37:55,656] [pool-1-thread-6] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast-sidebyside.tif: [testng] [2024-12-05 04:38:21,825] [pool-1-thread-11] Initializing /data/converted/darren/section0001_w1.tif: [testng] [2024-12-05 04:38:33,059] [pool-1-thread-8] Initializing /data/converted/strand/2Colors1Plane.tif: [testng] [2024-12-05 04:38:56,035] [pool-1-thread-3] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_8.tif: [testng] [2024-12-05 04:39:04,451] [pool-1-thread-11] Initializing /data/converted/markus/HighSpeedParas.tif: [testng] [2024-12-05 04:39:17,941] [pool-1-thread-9] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_9.tif: [testng] [2024-12-05 04:40:00,404] [pool-1-thread-8] Initializing /data/converted/joseph/Alike_best_example_but_WORKS_FINE_maybe_cause_shorter_expose.tif: [testng] [2024-12-05 04:43:28,826] [pool-1-thread-8] Initializing /data/converted/markus/30channels_exposure-series.tif: [testng] [2024-12-05 04:43:54,767] [pool-1-thread-7] Initializing /data/converted/david/snap-181518-0001.tif: [testng] [2024-12-05 04:44:35,432] [pool-1-thread-7] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_25.tif: [testng] [2024-12-05 04:46:01,355] [pool-1-thread-2] Initializing /data/qa-21570/250618_J1_diff_D3-2-0002.tif: [testng] [2024-12-05 04:46:42,166] [pool-1-thread-2] Initializing /data/converted/eirinn/11_10_2009-01-lcstim-15-10-09_position(1).tif: [testng] [2024-12-05 04:47:05,070] [pool-1-thread-8] Initializing /data/converted/ville/MultiCh-RGB/pollen_bw.tif: [testng] [2024-12-05 04:47:57,770] [pool-1-thread-12] Initializing /data/converted/jan/SampleStack_Mosaic4x5_comb.tif: [testng] [2024-12-05 04:48:02,047] [pool-1-thread-8] Initializing /data/converted/vladan/vladan.tif: [testng] [2024-12-05 04:51:08,566] [pool-1-thread-3] Initializing /data/qa-21570/20150421_HepG2_yH2AX_DAPI_0.5h_5GyDOWN_1512_cell04_SIR_ALX.dv_comp.tif: [testng] [2024-12-05 04:51:23,787] [pool-1-thread-3] Initializing /data/converted/darren/section0002_w1.tif: [testng] [2024-12-05 04:51:26,450] [pool-1-thread-9] Initializing /data/converted/joseph/E-2009-0004.tif: [testng] [2024-12-05 04:52:03,128] [pool-1-thread-3] Initializing /data/converted/converted/damian-compressed.tif: [testng] [2024-12-05 04:52:32,061] [pool-1-thread-2] Initializing /data/converted/michel/d.tif: [testng] [2024-12-05 04:52:40,977] [pool-1-thread-3] Initializing /data/converted/jonas/10_0907_multidrug-0001_AB01_08.tif: [testng] [2024-12-05 04:53:20,091] [pool-1-thread-2] Initializing /data/converted/karsten/247096n3s3s9.tif: [testng] [2024-12-05 04:54:02,856] [pool-1-thread-1] Initializing /data/converted/dietmar/hmads-bac1-bac7-af488-rho-af647_pre-2006-03-30-0016.tif: [testng] [2024-12-05 04:54:37,559] [pool-1-thread-6] Initializing /data/converted/markus/6ch-Z-stack_deconvolved.tif: [testng] [2024-12-05 04:56:48,382] [pool-1-thread-2] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast-widefield.tif: [testng] [2024-12-05 04:57:23,272] [pool-1-thread-8] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_12.tif: [testng] [2024-12-05 04:57:33,099] [pool-1-thread-7] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_5.tif: [testng] [2024-12-05 04:58:58,787] [pool-1-thread-1] Initializing /data/converted/eirinn/demo-tile.tif: [testng] [2024-12-05 05:00:14,152] [pool-1-thread-4] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_21.tif: [testng] [2024-12-05 05:00:23,609] [pool-1-thread-1] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_6.tif: [testng] [2024-12-05 05:05:24,887] [pool-1-thread-9] Initializing /data/converted/markus/Mouse-newborn-panorama_lossless_compressed.tif: [testng] [2024-12-05 05:06:13,541] [pool-1-thread-9] Initializing /data/converted/kelsey/432x342BW.tif: [testng] [2024-12-05 05:06:37,685] [pool-1-thread-9] Initializing /data/converted/eirinn/5_6_2009-dj9-03_a01_01.tif: [testng] [2024-12-05 05:07:26,557] [pool-1-thread-9] Initializing /data/converted/lior/live+cf2b.tif: [testng] [2024-12-05 05:07:30,517] [pool-1-thread-7] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_18.tif: [testng] [2024-12-05 05:07:50,858] [pool-1-thread-6] Initializing /data/converted/jonas/10_0907_multidrug-0001_AB01_03.tif: [testng] [2024-12-05 05:07:53,498] [pool-1-thread-8] Initializing /data/converted/markus/MosaiX_irregular_Z-stack_with_autofocus.tif: [testng] [2024-12-05 05:08:15,602] [pool-1-thread-9] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_11.tif: [testng] [2024-12-05 05:09:14,457] [pool-1-thread-1] Initializing /data/converted/markus/Confidence_ratio_image_PC12_neuroblastoma_Fura2_exp#9-2.tif: [testng] [2024-12-05 05:09:38,968] [pool-1-thread-4] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_15.tif: [testng] [2024-12-05 05:10:33,069] [pool-1-thread-2] Initializing /data/converted/dietmar/hmads-24h-bac1-7-af647-af488-rho-1day-hyb-csk-2007-06-29-0008_position(113).tif: [testng] [2024-12-05 05:14:03,196] [pool-1-thread-5] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_10.tif: [testng] [2024-12-05 05:14:04,971] [pool-1-thread-3] Initializing /data/converted/miso/Aufnahme-184058-0002.tif: [testng] [2024-12-05 05:14:26,546] [pool-1-thread-3] Initializing /data/converted/markus/HeLa-Reggie-GFP_ZT_fast-DCV-CI-measured-PSF.tif: [testng] [2024-12-05 05:15:28,878] [pool-1-thread-7] Initializing /data/converted/othmar/mozaic.tif: [testng] [2024-12-05 05:15:35,099] [pool-1-thread-9] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_14.tif: [testng] [2024-12-05 05:17:04,743] [pool-1-thread-4] Initializing /data/converted/cecilia/day 1 naked nb positive 1-2007-0055.tif: [testng] [2024-12-05 05:17:08,755] [pool-1-thread-8] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_17.tif: [testng] [2024-12-05 05:17:31,664] [pool-1-thread-2] Initializing /data/converted/stephan/notok1.tif: [testng] [2024-12-05 05:17:40,596] [pool-1-thread-4] Initializing /data/converted/stephan/notok2.tif: [testng] [2024-12-05 05:18:33,377] [pool-1-thread-12] Initializing /data/converted/converted/wtzer_series76_z003_ch00-with-rois.tif: [testng] [2024-12-05 05:18:56,250] [pool-1-thread-12] Initializing /data/converted/susan/BY4741NQ2.tif: [testng] [2024-12-05 05:19:11,253] [pool-1-thread-7] Initializing /data/converted/markus/Material_color_image_HRc_microscanned_4x3K.tif: [testng] [2024-12-05 05:19:20,974] [pool-1-thread-2] Initializing /data/converted/othmar/z-stack.tif: [testng] [2024-12-05 05:19:28,568] [pool-1-thread-12] Initializing /data/converted/michel/e.tif: [testng] [2024-12-05 05:19:31,794] [pool-1-thread-4] Initializing /data/converted/dietmar/138.tif: [testng] [2024-12-05 05:19:40,584] [pool-1-thread-7] Initializing /data/converted/shalin/ibidiuslide1-timelapse3_mid2.tif: [testng] 05:19:47,186 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 05:19:47,186 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 05:19:47,187 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-12-05_05-19-47.log] [testng] 05:19:47,188 |-INFO in ch.qos.logback.core.sift.SiftProcessor@631f32ff - End of configuration. [testng] 06:03:29,193 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 06:03:29,193 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 06:03:29,194 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-12-05_06-03-29.log] [testng] 06:03:29,194 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3310bb28 - End of configuration. [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 6625, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 118 minutes 32 seconds Finished: SUCCESS