Started by upstream project "BIOFORMATS-test-repo" build number 282
originally caused by:
 Started by user devspace
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder
[BIOFORMATS-test-folder] $ /bin/bash -xe /tmp/jenkins4716037763614485890.sh
+ '[' perkinelmer-densitometer = slidebook ']'
++ date +%u
+ '[' 5 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_44505_merge_ci -v /uod/idr/repos/curated/perkinelmer-densitometer:/data -v /uod/idr-scratch/merge-ci/curated/perkinelmer-densitometer:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
     [echo] isSnapshot = true

init-title:
     [echo] ----------=========== bio-formats-testing-framework ===========----------

init-timestamp:

init:

copy-resources:

compile:
[resolver:resolve] Resolving artifacts

compile-tests:
[resolver:resolve] Resolving artifacts
    [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test

test-automated:
   [testng] File leak detector installed
   [testng] 11:12:24,225 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
   [testng] 11:12:24,226 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - No custom configurators were discovered as a service.
   [testng] 11:12:24,226 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 11:12:24,228 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 11:12:24,228 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
   [testng] 11:12:24,228 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
   [testng] 11:12:24,228 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 0 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
   [testng] 11:12:24,228 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 11:12:24,229 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 11:12:24,229 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
   [testng] 11:12:24,229 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
   [testng] 11:12:24,229 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
   [testng] 11:12:24,481 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
   [testng] 11:12:24,481 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
   [testng] 11:12:24,516 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
   [testng] 11:12:24,516 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
   [testng] 11:12:24,526 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
   [testng] 11:12:24,526 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
   [testng] 11:12:24,526 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
   [testng] 11:12:24,527 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
   [testng] 11:12:24,527 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@7a69b07 - End of configuration.
   [testng] 11:12:24,528 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@636be97c - Registering current configuration as safe fallback point
   [testng] 11:12:24,529 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 300 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
   [testng] [2024-12-06 11:12:24,540] [main] java.version = 1.8.0_342
   [testng] 11:12:24,544 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
   [testng] 11:12:24,544 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 11:12:24,594 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-12-06_11-12-24.log]
   [testng] 11:12:24,595 |-INFO in ch.qos.logback.core.sift.SiftProcessor@13c9d689 - End of configuration.
   [testng] [2024-12-06 11:12:24,598] [main] testng.directory = /data
   [testng] [2024-12-06 11:12:24,598] [main] testng.configDirectory = /config
   [testng] [2024-12-06 11:12:24,613] [main] testng.multiplier = 1.0
   [testng] [2024-12-06 11:12:24,614] [main] testng.in-memory = false
   [testng] [2024-12-06 11:12:24,614] [main] testng.allow-missing = false
   [testng] [2024-12-06 11:12:24,614] [main] user.language = en
   [testng] [2024-12-06 11:12:24,614] [main] user.country = ${user.country}
   [testng] [2024-12-06 11:12:24,614] [main] Maximum heap size = 13653 MB
   [testng] Scanning for files...
   [testng] [2024-12-06 11:12:40,630] [main] ----------------------------------------
   [testng] [2024-12-06 11:12:40,630] [main] Total files: 19
   [testng] [2024-12-06 11:12:40,630] [main] Scan time: 16.016 s (842 ms/file)
   [testng] [2024-12-06 11:12:40,630] [main] ----------------------------------------
   [testng] Building list of tests...
   [testng] Ready to test 11 files
   [testng] [TestNG] Running:
   [testng]   Bio-Formats software test suite
   [testng] 
   [testng] [2024-12-06 11:13:01,675] [pool-1-thread-1] Initializing /data/ascb/2/V8701001.hdr: 
   [testng] 11:13:01,676 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
   [testng] 11:13:01,676 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 11:13:01,677 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-12-06_11-13-01.log]
   [testng] 11:13:01,677 |-INFO in ch.qos.logback.core.sift.SiftProcessor@404601e9 - End of configuration.
   [testng] [2024-12-06 11:13:02,419] [pool-1-thread-11] Initializing /data/ascb/Y7616001.tif: 
   [testng] 11:13:02,420 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
   [testng] 11:13:02,420 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 11:13:02,421 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-12-06_11-13-02.log]
   [testng] 11:13:02,421 |-INFO in ch.qos.logback.core.sift.SiftProcessor@76916939 - End of configuration.
   [testng] [2024-12-06 11:13:04,169] [pool-1-thread-10] Initializing /data/ascb/PT1173A001.tif: 
   [testng] 11:13:04,169 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
   [testng] 11:13:04,169 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 11:13:04,170 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-12-06_11-13-04.log]
   [testng] 11:13:04,171 |-INFO in ch.qos.logback.core.sift.SiftProcessor@217ae782 - End of configuration.
   [testng] [2024-12-06 11:13:05,667] [pool-1-thread-9] Initializing /data/ascb/PT1173A001.hdr: 
   [testng] 11:13:05,668 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
   [testng] 11:13:05,668 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 11:13:05,669 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-12-06_11-13-05.log]
   [testng] 11:13:05,670 |-INFO in ch.qos.logback.core.sift.SiftProcessor@321d948c - End of configuration.
   [testng] [2024-12-06 11:13:06,327] [pool-1-thread-8] Initializing /data/ascb/DP1190.hdr: 
   [testng] 11:13:06,327 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
   [testng] 11:13:06,327 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 11:13:06,328 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-12-06_11-13-06.log]
   [testng] 11:13:06,328 |-INFO in ch.qos.logback.core.sift.SiftProcessor@17bc868 - End of configuration.
   [testng] [2024-12-06 11:13:07,187] [pool-1-thread-7] Initializing /data/ascb/DP1190.tif: 
   [testng] 11:13:07,187 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
   [testng] 11:13:07,187 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 11:13:07,188 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-12-06_11-13-07.log]
   [testng] 11:13:07,188 |-INFO in ch.qos.logback.core.sift.SiftProcessor@d566e42 - End of configuration.
   [testng] [2024-12-06 11:13:09,577] [pool-1-thread-6] Initializing /data/ascb/1/T8710001.hdr: 
   [testng] 11:13:09,577 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
   [testng] 11:13:09,577 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 11:13:09,578 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-12-06_11-13-09.log]
   [testng] 11:13:09,578 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1e701ecb - End of configuration.
   [testng] [2024-12-06 11:13:10,374] [pool-1-thread-5] Initializing /data/ascb/3/PT118001.hdr: 
   [testng] 11:13:10,375 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
   [testng] 11:13:10,375 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 11:13:10,375 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-12-06_11-13-10.log]
   [testng] 11:13:10,376 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5692fbdf - End of configuration.
   [testng] [2024-12-06 11:13:11,075] [pool-1-thread-4] Initializing /data/ascb/Y7616001.hdr: 
   [testng] 11:13:11,075 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
   [testng] 11:13:11,075 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 11:13:11,076 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-12-06_11-13-11.log]
   [testng] 11:13:11,076 |-INFO in ch.qos.logback.core.sift.SiftProcessor@24a4621e - End of configuration.
   [testng] [2024-12-06 11:13:11,854] [pool-1-thread-3] Initializing /data/ascb/U8092001.tif: 
   [testng] 11:13:11,854 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
   [testng] 11:13:11,855 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 11:13:11,855 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-12-06_11-13-11.log]
   [testng] 11:13:11,855 |-INFO in ch.qos.logback.core.sift.SiftProcessor@532fafb9 - End of configuration.
   [testng] [2024-12-06 11:13:13,721] [pool-1-thread-2] Initializing /data/ascb/U8092001.hdr: 
   [testng] 11:13:13,722 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
   [testng] 11:13:13,722 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 11:13:13,723 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-12-06_11-13-13.log]
   [testng] 11:13:13,723 |-INFO in ch.qos.logback.core.sift.SiftProcessor@dece623 - End of configuration.
   [testng] 
   [testng] ===============================================
   [testng] Bio-Formats software test suite
   [testng] Total tests run: 583, Failures: 0, Skips: 0
   [testng] ===============================================
   [testng] 

BUILD SUCCESSFUL
Total time: 1 minute 14 seconds
Finished: SUCCESS