Started by upstream project "BIOFORMATS-test-repo" build number 282
originally caused by:
Started by user devspace
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@8
[BIOFORMATS-test-folder@8] $ /bin/bash -xe /tmp/jenkins4301682417469732443.sh
+ '[' sxm = slidebook ']'
++ date +%u
+ '[' 5 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_44526_merge_ci -v /uod/idr/repos/curated/sxm:/data -v /uod/idr-scratch/merge-ci/curated/sxm:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
[echo] isSnapshot = true
init-title:
[echo] ----------=========== bio-formats-testing-framework ===========----------
init-timestamp:
init:
copy-resources:
compile:
[resolver:resolve] Resolving artifacts
compile-tests:
[resolver:resolve] Resolving artifacts
[javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
test-automated:
[testng] File leak detector installed
[testng] 11:34:44,773 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
[testng] 11:34:44,775 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - No custom configurators were discovered as a service.
[testng] 11:34:44,775 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 11:34:44,776 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 11:34:44,776 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
[testng] 11:34:44,776 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
[testng] 11:34:44,776 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 0 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
[testng] 11:34:44,776 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 11:34:44,777 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 11:34:44,777 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
[testng] 11:34:44,777 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
[testng] 11:34:44,777 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
[testng] 11:34:45,003 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
[testng] 11:34:45,003 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
[testng] 11:34:45,031 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
[testng] 11:34:45,031 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
[testng] 11:34:45,039 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
[testng] 11:34:45,039 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
[testng] 11:34:45,039 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
[testng] 11:34:45,040 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
[testng] 11:34:45,040 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@7a69b07 - End of configuration.
[testng] 11:34:45,041 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@636be97c - Registering current configuration as safe fallback point
[testng] 11:34:45,041 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 264 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
[testng] [2024-12-06 11:34:45,050] [main] java.version = 1.8.0_342
[testng] 11:34:45,054 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
[testng] 11:34:45,054 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 11:34:45,099 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-12-06_11-34-45.log]
[testng] 11:34:45,100 |-INFO in ch.qos.logback.core.sift.SiftProcessor@13c9d689 - End of configuration.
[testng] [2024-12-06 11:34:45,102] [main] testng.directory = /data
[testng] [2024-12-06 11:34:45,102] [main] testng.configDirectory = /config
[testng] [2024-12-06 11:34:45,114] [main] testng.multiplier = 1.0
[testng] [2024-12-06 11:34:45,115] [main] testng.in-memory = false
[testng] [2024-12-06 11:34:45,115] [main] testng.allow-missing = false
[testng] [2024-12-06 11:34:45,115] [main] user.language = en
[testng] [2024-12-06 11:34:45,115] [main] user.country = ${user.country}
[testng] [2024-12-06 11:34:45,115] [main] Maximum heap size = 13653 MB
[testng] Scanning for files...
[testng] [2024-12-06 11:37:56,015] [main] ----------------------------------------
[testng] [2024-12-06 11:37:56,015] [main] Total files: 268
[testng] [2024-12-06 11:37:56,015] [main] Scan time: 190.9 s (712 ms/file)
[testng] [2024-12-06 11:37:56,015] [main] ----------------------------------------
[testng] Building list of tests...
[testng] Ready to test 160 files
[testng] [TestNG] Running:
[testng] Bio-Formats software test suite
[testng]
[testng] [2024-12-06 11:42:54,447] [pool-1-thread-1] Initializing /data/steve/JEOL/SPM (Hiroyuki Isobe)/HOPG.tif:
[testng] 11:42:54,447 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
[testng] 11:42:54,447 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 11:42:54,448 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-12-06_11-42-54.log]
[testng] 11:42:54,448 |-INFO in ch.qos.logback.core.sift.SiftProcessor@bfaa65d - End of configuration.
[testng] [2024-12-06 11:42:55,957] [pool-1-thread-12] Initializing /data/steve/TIFF/HAFF SEM:
[testng] 11:42:55,957 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
[testng] 11:42:55,957 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 11:42:55,958 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-12-06_11-42-55.log]
[testng] 11:42:55,958 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2308e5d0 - End of configuration.
[testng] [2024-12-06 11:42:57,357] [pool-1-thread-11] Initializing /data/steve/Oxford Instr (Yoshimasa)/98042103.TIF:
[testng] 11:42:57,358 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
[testng] 11:42:57,358 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 11:42:57,358 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-12-06_11-42-57.log]
[testng] 11:42:57,359 |-INFO in ch.qos.logback.core.sift.SiftProcessor@14e0e3b5 - End of configuration.
[testng] [2024-12-06 11:42:58,560] [pool-1-thread-10] Initializing /data/steve/RHK Tech/RHK STS (Peter Sloan)/SloanSpec.SM2:
[testng] 11:42:58,560 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
[testng] 11:42:58,560 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 11:42:58,561 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-12-06_11-42-58.log]
[testng] 11:42:58,561 |-INFO in ch.qos.logback.core.sift.SiftProcessor@25301801 - End of configuration.
[testng] [2024-12-06 11:42:58,947] [pool-1-thread-9] Initializing /data/steve/UBM (Rosset)/SG2.PR3:
[testng] 11:42:58,947 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
[testng] 11:42:58,947 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 11:42:58,948 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-12-06_11-42-58.log]
[testng] 11:42:58,948 |-INFO in ch.qos.logback.core.sift.SiftProcessor@115820e6 - End of configuration.
[testng] [2024-12-06 11:42:59,313] [pool-1-thread-8] Initializing /data/steve/TopoMetrix/Topo MFM (SC)/NDPOL-01.TFR:
[testng] 11:42:59,313 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
[testng] 11:42:59,313 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 11:42:59,314 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-12-06_11-42-59.log]
[testng] 11:42:59,314 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3be4e27 - End of configuration.
[testng] [2024-12-06 11:42:59,670] [pool-1-thread-7] Initializing /data/steve/SBIG/M81 H 250s Tr=5s:
[testng] 11:42:59,670 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
[testng] 11:42:59,671 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 11:42:59,671 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-12-06_11-42-59.log]
[testng] 11:42:59,672 |-INFO in ch.qos.logback.core.sift.SiftProcessor@593f7f33 - End of configuration.
[testng] [2024-12-06 11:43:01,196] [pool-1-thread-6] Initializing /data/steve/Philips (Markus G)/135-30.IMG:
[testng] 11:43:01,196 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
[testng] 11:43:01,196 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 11:43:01,197 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-12-06_11-43-01.log]
[testng] 11:43:01,197 |-INFO in ch.qos.logback.core.sift.SiftProcessor@10c3e620 - End of configuration.
[testng] [2024-12-06 11:43:01,576] [pool-1-thread-5] Initializing /data/steve/JPK Instr (Christian L)/Virus.jpk:
[testng] 11:43:01,576 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
[testng] 11:43:01,576 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 11:43:01,577 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-12-06_11-43-01.log]
[testng] 11:43:01,577 |-INFO in ch.qos.logback.core.sift.SiftProcessor@24f6ebca - End of configuration.
[testng] [2024-12-06 11:43:02,287] [pool-1-thread-4] Initializing /data/steve/JEOL/WinSem (Sue)/Shuttle tile ceramic/SHUTTLEB.IMG:
[testng] 11:43:02,287 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
[testng] 11:43:02,287 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 11:43:02,287 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-12-06_11-43-02.log]
[testng] 11:43:02,288 |-INFO in ch.qos.logback.core.sift.SiftProcessor@452882a0 - End of configuration.
[testng] [2024-12-06 11:43:02,869] [pool-1-thread-3] Initializing /data/steve/Zeiss LSM/Zeiss LSM (John S)/Zeiss LSM 2 samples:pixel/coltubfitc1proj.lsm:
[testng] 11:43:02,869 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
[testng] 11:43:02,869 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 11:43:02,870 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-12-06_11-43-02.log]
[testng] 11:43:02,870 |-INFO in ch.qos.logback.core.sift.SiftProcessor@efed72a - End of configuration.
[testng] [2024-12-06 11:43:03,586] [pool-1-thread-2] Initializing /data/steve/RHK Tech/RHK STS (Peter Sloan)/B50303AS.SM2:
[testng] 11:43:03,586 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
[testng] 11:43:03,587 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 11:43:03,587 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-12-06_11-43-03.log]
[testng] 11:43:03,587 |-INFO in ch.qos.logback.core.sift.SiftProcessor@f0ca454 - End of configuration.
[testng] [2024-12-06 11:43:09,238] [pool-1-thread-8] Initializing /data/steve/Seiko Instr (Hwansoo)/05808001-3.xqd:
[testng] [2024-12-06 11:43:09,762] [pool-1-thread-9] Initializing /data/steve/JEOL/WinSem (Sue)/SIC2.IMG:
[testng] [2024-12-06 11:43:10,450] [pool-1-thread-2] Initializing /data/steve/Zeiss LSM/Zeiss LSM (John S)/Zeiss LSM 1 sample:pixel/ug6proj3.lsm:
[testng] [2024-12-06 11:43:11,093] [pool-1-thread-6] Initializing /data/steve/Misc SXM test images/Hough transform/Dale's bubbles:
[testng] [2024-12-06 11:43:13,218] [pool-1-thread-10] Initializing /data/steve/TIFF/Macrophage cell images/T24-24 1600 36_48-bit.tif:
[testng] [2024-12-06 11:43:14,858] [pool-1-thread-3] Initializing /data/steve/RHK Tech/RHK (Bob Baker)/Examp_03.SM2:
[testng] [2024-12-06 11:43:15,440] [pool-1-thread-5] Initializing /data/steve/Burleigh/Burleigh v2/Burleigh v2 (Phil W)/0_h4_4.img:
[testng] [2024-12-06 11:43:19,256] [pool-1-thread-4] Initializing /data/steve/Gatan/Gatan PC (Eric Leroy)/Iron map 10.dm3:
[testng] [2024-12-06 11:43:19,855] [pool-1-thread-8] Initializing /data/steve/Hamamatsu (Keith B)/HIS-12bit-2b.HIS:
[testng] [2024-12-06 11:43:20,413] [pool-1-thread-3] Initializing /data/steve/JPK Instr (Christian L)/Titanium-implant.jpk:
[testng] [2024-12-06 11:43:21,156] [pool-1-thread-11] Initializing /data/steve/Quesant Instr/Quesant v1.2 (Marc F)/stm2.afm:
[testng] [2024-12-06 11:43:21,562] [pool-1-thread-1] Initializing /data/steve/Molecular Imaging/Mol Imag v5.0 (Lionel S)/Cu#18-NaOH-035.STP:
[testng] [2024-12-06 11:43:21,986] [pool-1-thread-2] Initializing /data/steve/Gatan/TEM (Larry Thomas)/TEM 10 KX:
[testng] [2024-12-06 11:43:22,284] [pool-1-thread-7] Initializing /data/steve/Molecular Imaging/Mol Imag v5.2 (Steve Higgins)/014.STP:
[testng] [2024-12-06 11:43:22,759] [pool-1-thread-12] Initializing /data/steve/Gatan/Gatan TIFF/THE FLY 4 TIFF:
[testng] [2024-12-06 11:43:25,467] [pool-1-thread-4] Initializing /data/steve/JEOL/WinSem (Sue)/TA.IMG:
[testng] [2024-12-06 11:43:26,746] [pool-1-thread-9] Initializing /data/steve/FITS/M51.fits:
[testng] [2024-12-06 11:43:28,015] [pool-1-thread-2] Initializing /data/steve/VG SAM (Karen)/BGND.DTI:
[testng] [2024-12-06 11:43:28,522] [pool-1-thread-6] Initializing /data/steve/Oxford Instr (Yoshimasa)/80619a.top:
[testng] [2024-12-06 11:43:29,016] [pool-1-thread-7] Initializing /data/steve/JEOL/WinSem (Sue)/Shuttle tile ceramic/SHUTTLEC.IMG:
[testng] [2024-12-06 11:43:29,683] [pool-1-thread-8] Initializing /data/steve/JEOL/SPM (Hiroyuki Isobe)/990304j.tif:
[testng] [2024-12-06 11:43:30,987] [pool-1-thread-11] Initializing /data/steve/TopoMetrix/Topo SFM (SC)/IM_P1.TFR:
[testng] [2024-12-06 11:43:31,364] [pool-1-thread-1] Initializing /data/steve/RHK Tech/RHK (Bob Baker)/SCREEN1.PICT:
[testng] [2024-12-06 11:43:31,761] [pool-1-thread-3] Initializing /data/steve/Gatan/Gatan (Sue D)/Honey Bee:
[testng] [2024-12-06 11:43:32,026] [pool-1-thread-5] Initializing /data/steve/Zeiss LSM/Zeiss LSM (Ewald B)/NIALDIAN.TIF:
[testng] [2024-12-06 11:43:33,274] [pool-1-thread-10] Initializing /data/steve/FITS/Meade DSI/M31bR1.fts:
[testng] [2024-12-06 11:43:33,844] [pool-1-thread-9] Initializing /data/steve/Misc SXM test images/AVI movie/Clean Cu(110) LEED.avi:
[testng] [2024-12-06 11:43:35,332] [pool-1-thread-10] Initializing /data/steve/Hamamatsu (Keith B)/HIS-16bit-nopack.HIS:
[testng] [2024-12-06 11:43:35,770] [pool-1-thread-6] Initializing /data/steve/Leica TCS (Keith B)/25_5BJ.SXM:
[testng] [2024-12-06 11:43:36,828] [pool-1-thread-2] Initializing /data/steve/TopoMetrix/Topo STM v5 (Ewald B)/c80-50.ffr:
[testng] [2024-12-06 11:43:37,782] [pool-1-thread-12] Initializing /data/steve/Zeiss LSM/Zeiss LSM (Ewald B)/FGD006.TIF:
[testng] [2024-12-06 11:43:39,316] [pool-1-thread-3] Initializing /data/steve/FITS/M104.fits:
[testng] [2024-12-06 11:43:39,601] [pool-1-thread-11] Initializing /data/steve/Quesant Instr/Quesant v2.0 (Brad Taft)/03031020.afm:
[testng] [2024-12-06 11:43:40,477] [pool-1-thread-1] Initializing /data/steve/RHK Tech/RHK (Bob Baker)/Examp_01.SM2:
[testng] [2024-12-06 11:43:41,223] [pool-1-thread-9] Initializing /data/steve/RHK Tech/RHK (Bob Baker)/Examp_04.SM2:
[testng] [2024-12-06 11:43:41,689] [pool-1-thread-4] Initializing /data/steve/SBIG/M82 H 100s Tr=10s:
[testng] [2024-12-06 11:43:44,082] [pool-1-thread-3] Initializing /data/steve/RHK Tech/RHK (Bob Baker)/Examp_02.SM2:
[testng] [2024-12-06 11:43:44,858] [pool-1-thread-8] Initializing /data/steve/Gatan/Gatan (Sue D)/THE FLY A:
[testng] [2024-12-06 11:43:45,767] [pool-1-thread-10] Initializing /data/steve/TIFF/Macrophage cell images/D1-A-1 1392 36-bit.tif:
[testng] [2024-12-06 11:43:46,542] [pool-1-thread-5] Initializing /data/steve/Gatan/Gatan (Patrick Burton)/PDB_DARK_25k.dm2:
[testng] [2024-12-06 11:43:46,931] [pool-1-thread-2] Initializing /data/steve/Gatan/Gatan PC (Eric Leroy)/BF super alliage.dm3:
[testng] [2024-12-06 11:43:48,073] [pool-1-thread-7] Initializing /data/steve/Burleigh/Burleigh v1/Burleigh.IMG:
[testng] [2024-12-06 11:43:50,033] [pool-1-thread-11] Initializing /data/steve/Philips (Markus G)/135-33.IMG:
[testng] [2024-12-06 11:43:50,527] [pool-1-thread-9] Initializing /data/steve/JEOL/WinSem (Sue)/Shuttle tile ceramic/SHUTTLED.IMG:
[testng] [2024-12-06 11:43:51,362] [pool-1-thread-1] Initializing /data/steve/TopoMetrix/Topo STM v5 (Ewald B)/c80-50zfr.tif:
[testng] [2024-12-06 11:43:53,020] [pool-1-thread-6] Initializing /data/steve/Misc SXM test images/Fake STM/Fake STM (8 rpts) TIFF:
[testng] [2024-12-06 11:43:54,515] [pool-1-thread-12] Initializing /data/steve/JEOL/WinSem (Sue)/RICK1.IMG:
[testng] [2024-12-06 11:43:55,249] [pool-1-thread-3] Initializing /data/steve/Quesant Instr/Quesant v2.0 (Brad Taft)/03031004.afm:
[testng] [2024-12-06 11:43:56,006] [pool-1-thread-2] Initializing /data/steve/Misc SXM test images/Hough transform/Nathalie's test:
[testng] [2024-12-06 11:43:57,737] [pool-1-thread-5] Initializing /data/steve/TopoMetrix/Topo STM v4 (Gabriella)/159HF02.ZFP:
[testng] [2024-12-06 11:43:58,242] [pool-1-thread-8] Initializing /data/steve/Hamamatsu (Keith B)/HIS-12bit-1a.HIS:
[testng] [2024-12-06 11:43:59,276] [pool-1-thread-11] Initializing /data/steve/Gatan/Gatan (Sue D)/THE FLY 3:
[testng] [2024-12-06 11:44:00,831] [pool-1-thread-10] Initializing /data/steve/JPK Instr (Christian L)/Anti-reflex-coating.jpk:
[testng] [2024-12-06 11:44:01,691] [pool-1-thread-7] Initializing /data/steve/RHK Tech/RHK (Oliver Leifeld)/SM02_08.SM2:
[testng] [2024-12-06 11:44:02,174] [pool-1-thread-4] Initializing /data/steve/Gatan/Gatan (Sue D)/WOODLOUSE:
[testng] [2024-12-06 11:44:02,501] [pool-1-thread-3] Initializing /data/steve/Oxford Instr (Yoshimasa)/98042103.top:
[testng] [2024-12-06 11:44:02,963] [pool-1-thread-9] Initializing /data/steve/Molecular Imaging/Mol Imag v4.19 (Michael Z)/Wafer_vesicles_2min_010.STP:
[testng] [2024-12-06 11:44:04,102] [pool-1-thread-5] Initializing /data/steve/Gatan/Gatan TIFF/Si CHIP TIFF:
[testng] [2024-12-06 11:44:06,898] [pool-1-thread-8] Initializing /data/steve/Misc SXM test images/Chromosome images/HRhuman1.pict:
[testng] [2024-12-06 11:44:07,722] [pool-1-thread-11] Initializing /data/steve/RHK Tech/RHK-XPM Pro (Lydie L)/B70417000K.SM3:
[testng] [2024-12-06 11:44:08,314] [pool-1-thread-12] Initializing /data/steve/TIFF/8MAR03A.TIFF:
[testng] [2024-12-06 11:44:10,277] [pool-1-thread-6] Initializing /data/steve/Gatan/Gatan Mac (Guy Mayor)/Digital Micrograph 3.4:
[testng] [2024-12-06 11:44:10,590] [pool-1-thread-1] Initializing /data/steve/RHK Tech/RHK (Mark Flowers)/Demo07.sm2:
[testng] [2024-12-06 11:44:11,292] [pool-1-thread-2] Initializing /data/steve/Gatan/Gatan Mac (Guy Mayor)/Digital Micrograph 2.5:
[testng] [2024-12-06 11:44:12,708] [pool-1-thread-4] Initializing /data/steve/Unisoku (Takashi)/Sample.HDR:
[testng] [2024-12-06 11:44:13,684] [pool-1-thread-7] Initializing /data/steve/Hamamatsu (Keith B)/HIS-12bit-3.HIS:
[testng] [2024-12-06 11:44:14,369] [pool-1-thread-9] Initializing /data/steve/TIFF/CD-ROM TIFF:
[testng] [2024-12-06 11:44:16,438] [pool-1-thread-3] Initializing /data/steve/Misc SXM test images/Chromosome images/Chironomus2.pict:
[testng] [2024-12-06 11:44:16,895] [pool-1-thread-10] Initializing /data/steve/Bio-Rad (Nico Lindegger)/a.PIC:
[testng] [2024-12-06 11:44:17,769] [pool-1-thread-8] Initializing /data/steve/Misc SXM test images/BMP images/m20_p.bmp:
[testng] [2024-12-06 11:44:17,984] [pool-1-thread-11] Initializing /data/steve/Misc SXM test images/Chromosome images/HKGmaizeMei3.pict:
[testng] [2024-12-06 11:44:19,505] [pool-1-thread-6] Initializing /data/steve/Quesant Instr/Quesant v1.2 (Marc F)/stm1.afm:
[testng] [2024-12-06 11:44:20,971] [pool-1-thread-2] Initializing /data/steve/Quesant Instr/Quesant v2.0 (Hal E)/2-18-05A.afm:
[testng] [2024-12-06 11:44:21,642] [pool-1-thread-1] Initializing /data/steve/TIFF/Macrophage cell images/Pre-d-0 1392 36-bit.tif:
[testng] [2024-12-06 11:44:22,616] [pool-1-thread-8] Initializing /data/steve/Philips (Markus G)/135-31.IMG:
[testng] [2024-12-06 11:44:23,543] [pool-1-thread-3] Initializing /data/steve/TIFF/Little owl TIFF:
[testng] [2024-12-06 11:44:25,695] [pool-1-thread-5] Initializing /data/steve/TIFF/Macrophage cell images/T48-44 800 24-bit.tif:
[testng] [2024-12-06 11:44:27,620] [pool-1-thread-12] Initializing /data/steve/RHK Tech/RHK (Mark Flowers)/Silicon.sm2:
[testng] [2024-12-06 11:44:28,201] [pool-1-thread-11] Initializing /data/steve/Quesant Instr/Quesant v1.2 (Marc F)/afm3.afm:
[testng] [2024-12-06 11:44:28,717] [pool-1-thread-7] Initializing /data/steve/VG SAM (Karen)/PEAK.DTI:
[testng] [2024-12-06 11:44:29,230] [pool-1-thread-10] Initializing /data/steve/Gatan/Gatan PC (Eric Leroy)/Oxygen map 1.dm3:
[testng] [2024-12-06 11:44:31,577] [pool-1-thread-2] Initializing /data/steve/JEOL/SPM (Hiroyuki Isobe)/JEOL3.tif:
[testng] [2024-12-06 11:44:33,454] [pool-1-thread-6] Initializing /data/steve/Gatan/Gatan TIFF/BALL TIFF:
[testng] [2024-12-06 11:44:35,675] [pool-1-thread-8] Initializing /data/steve/Seiko Instr (Hwansoo)/05808001-2.xqd:
[testng] [2024-12-06 11:44:36,503] [pool-1-thread-9] Initializing /data/steve/TopoMetrix/Topo STM v5 (Ewald B)/c80-50ffr.tif:
[testng] [2024-12-06 11:44:39,030] [pool-1-thread-10] Initializing /data/steve/TIFF/Macrophage cell images/T08-08 1600 24-bit.tif:
[testng] [2024-12-06 11:44:41,210] [pool-1-thread-1] Initializing /data/steve/Gatan/Gatan (Sue D)/THE FLY 2:
[testng] [2024-12-06 11:44:42,333] [pool-1-thread-4] Initializing /data/steve/Quesant Instr/Quesant v1.2 (Marc F)/afm1.afm:
[testng] [2024-12-06 11:44:43,605] [pool-1-thread-7] Initializing /data/steve/Seiko Instr (Hwansoo)/05808001.xqd:
[testng] [2024-12-06 11:44:44,827] [pool-1-thread-12] Initializing /data/steve/Gatan/Gatan (Sue D)/SEM 500X (Larry):
[testng] [2024-12-06 11:44:45,254] [pool-1-thread-11] Initializing /data/steve/RHK Tech/RHK-XPM Pro (Lydie L)/B70417000Q.SM3:
[testng] [2024-12-06 11:44:46,889] [pool-1-thread-8] Initializing /data/steve/Hamamatsu (Keith B)/HIS-16bit-packed.HIS:
[testng] [2024-12-06 11:44:47,811] [pool-1-thread-3] Initializing /data/steve/Gatan/Gatan (Sue D)/THE FLY:
[testng] [2024-12-06 11:44:49,452] [pool-1-thread-1] Initializing /data/steve/RHK Tech/RHK IV (Koji N)/02042603.sm2:
[testng] [2024-12-06 11:44:50,446] [pool-1-thread-4] Initializing /data/steve/SM-Camera/W(110)+Fe,5nA,30min@110eV:
[testng] [2024-12-06 11:44:52,561] [pool-1-thread-5] Initializing /data/steve/TIFF/ta123 stack TIFF:
[testng] [2024-12-06 11:44:54,806] [pool-1-thread-12] Initializing /data/steve/JEOL/SPM (Masashi N)/FFM204.TIF:
[testng] [2024-12-06 11:44:57,028] [pool-1-thread-6] Initializing /data/steve/JEOL/WinSem (Sue)/CONCRETE.IMG:
[testng] [2024-12-06 11:44:57,917] [pool-1-thread-9] Initializing /data/steve/Quesant Instr/Quesant v1.2 (Marc F)/stm3.afm:
[testng] [2024-12-06 11:44:58,495] [pool-1-thread-2] Initializing /data/steve/Quesant Instr/Quesant v1.2 (Marc F)/afm2.afm:
[testng] [2024-12-06 11:44:59,024] [pool-1-thread-11] Initializing /data/steve/SM-Camera/Orhan + IPES rig:
[testng] [2024-12-06 11:45:00,841] [pool-1-thread-7] Initializing /data/steve/JEOL/WinSem (Sue)/BALLS.IMG:
[testng] [2024-12-06 11:45:01,674] [pool-1-thread-8] Initializing /data/steve/RHK Tech/RHK (Bob Baker)/Examp_05.SM2:
[testng] [2024-12-06 11:45:03,216] [pool-1-thread-3] Initializing /data/steve/Philips (Markus G)/135-32.IMG:
[testng] [2024-12-06 11:45:04,731] [pool-1-thread-1] Initializing /data/steve/Burleigh/Burleigh v2/Graphite:
[testng] [2024-12-06 11:45:06,796] [pool-1-thread-10] Initializing /data/steve/JEOL/WinSem (Sue)/Shuttle tile ceramic/SHUTTLEE.IMG:
[testng] [2024-12-06 11:45:09,106] [pool-1-thread-9] Initializing /data/steve/Burleigh/Burleigh v2/Burleigh v2 (Phil W)/1_2h2_3.img:
[testng] [2024-12-06 11:45:11,278] [pool-1-thread-4] Initializing /data/steve/Misc SXM test images/Stacks/DoF test stack (Ahnelt):
[testng] [2024-12-06 11:45:13,279] [pool-1-thread-8] Initializing /data/steve/FITS/Meade DSI/M31bG1.fts:
[testng] [2024-12-06 11:45:13,443] [pool-1-thread-2] Initializing /data/steve/Misc SXM test images/Stacks/Fred's stack:
[testng] [2024-12-06 11:45:15,295] [pool-1-thread-5] Initializing /data/steve/Zeiss LSM/Zeiss LSM (John S)/Zeiss LSM 2 samples:pixel/coltubfitc1.lsm:
[testng] [2024-12-06 11:45:16,175] [pool-1-thread-12] Initializing /data/steve/Seiko Instr (Hwansoo)/05808002.xqf:
[testng] [2024-12-06 11:45:16,718] [pool-1-thread-3] Initializing /data/steve/RHK Tech/RHK (Mark Flowers)/Demo04.sm2:
[testng] [2024-12-06 11:45:17,915] [pool-1-thread-11] Initializing /data/steve/TopoMetrix/Topo SFM (SC)/FFT test:
[testng] [2024-12-06 11:45:20,904] [pool-1-thread-8] Initializing /data/steve/JEOL/SEM (Steve Foulds)/IPS2000.DAT:
[testng] [2024-12-06 11:45:21,777] [pool-1-thread-7] Initializing /data/steve/FITS/M13.fits:
[testng] [2024-12-06 11:45:21,991] [pool-1-thread-6] Initializing /data/steve/TIFF/Hough test TIFF:
[testng] [2024-12-06 11:45:25,633] [pool-1-thread-1] Initializing /data/steve/Zeiss LSM/Zeiss LSM - 2 samp:pix (??)/16bcutagain.lsm:
[testng] [2024-12-06 11:45:26,682] [pool-1-thread-12] Initializing /data/steve/SBIG/M81 M 40s:
[testng] [2024-12-06 11:45:28,880] [pool-1-thread-3] Initializing /data/steve/TopoMetrix/Topo SFM (SC)/PA7.TFR:
[testng] [2024-12-06 11:45:29,503] [pool-1-thread-10] Initializing /data/steve/TopoMetrix/Topo MFM (SC)/NDR2-1.2FL:
[testng] [2024-12-06 11:45:30,201] [pool-1-thread-5] Initializing /data/steve/Hamamatsu (Keith B)/HIS-8bit.HIS:
[testng] [2024-12-06 11:45:31,492] [pool-1-thread-9] Initializing /data/steve/Molecular Imaging/Mol Imag v4.18 (Reinat)/npc-liq-sharO_003.STP:
[testng] [2024-12-06 11:45:32,258] [pool-1-thread-7] Initializing /data/steve/Philips (Markus G)/302.IMG:
[testng] [2024-12-06 11:45:33,425] [pool-1-thread-8] Initializing /data/steve/TopoMetrix/Topo STM (Liam McD)/GRID1.TFR:
[testng] [2024-12-06 11:45:35,206] [pool-1-thread-3] Initializing /data/steve/FITS/Meade DSI/M31bB1.fts:
[testng] [2024-12-06 11:45:35,436] [pool-1-thread-2] Initializing /data/steve/Molecular Imaging/Mol Imag v5.2 (Steve Higgins)/015.STP:
[testng] [2024-12-06 11:45:36,131] [pool-1-thread-4] Initializing /data/steve/Bio-Rad (Nico Lindegger)/b.PIC:
[testng] [2024-12-06 11:45:36,994] [pool-1-thread-1] Initializing /data/steve/JEOL/SPM (Masashi N)/AFM204.TIF:
[testng] [2024-12-06 11:45:38,934] [pool-1-thread-5] Initializing /data/steve/Misc SXM test images/Chromosome images/HKGmaizeMitose5.pict:
[testng] [2024-12-06 11:45:39,370] [pool-1-thread-10] Initializing /data/steve/Targa/Test.TGA:
[testng] [2024-12-06 11:45:39,847] [pool-1-thread-11] Initializing /data/steve/Zeiss LSM/Zeiss LSM (John S)/Zeiss LSM 1 sample:pixel/ug6stack3.lsm:
[testng] [2024-12-06 11:45:40,718] [pool-1-thread-6] Initializing /data/steve/Gatan/Gatan (Patrick Burton)/PDB_DARK_25k.dm3:
[testng] [2024-12-06 11:45:41,849] [pool-1-thread-3] Initializing /data/steve/TopoMetrix/Topo SFM (SC)/PA2.TFR:
[testng] [2024-12-06 11:45:43,035] [pool-1-thread-9] Initializing /data/steve/JEOL/WinSem (Sue)/Shuttle tile ceramic/SHUTTLEA.IMG:
[testng] [2024-12-06 11:45:43,970] [pool-1-thread-7] Initializing /data/steve/TIFF/Macrophage cell images/RT1-f-24 1600 24-bit.tif:
[testng] [2024-12-06 11:45:46,565] [pool-1-thread-8] Initializing /data/steve/TIFF/ta269 TIFF:
[testng] [2024-12-06 11:45:48,803] [pool-1-thread-12] Initializing /data/steve/TopoMetrix/Topo STM v5 (Ewald B)/c80-50.zfr:
[testng] [2024-12-06 11:45:49,868] [pool-1-thread-6] Initializing /data/steve/JEOL/SPM (Hiroyuki Isobe)/990301c.tif:
[testng] [2024-12-06 11:45:51,820] [pool-1-thread-5] Initializing /data/steve/Quesant Instr/Quesant v2.0 (Hal E)/03-17-05A.afm:
[testng] [2024-12-06 11:45:52,501] [pool-1-thread-2] Initializing /data/steve/Misc SXM test images/Fake STM/Fake STM (4 rpts) TIFF:
[testng] [2024-12-06 11:45:54,305] [pool-1-thread-10] Initializing /data/steve/JEOL/JSM (Inger Ekvell)/g11@0.IMG:
[testng] [2024-12-06 11:45:55,176] [pool-1-thread-3] Initializing /data/steve/TIFF/CONCRETE TIFF:
[testng] [2024-12-06 11:45:57,133] [pool-1-thread-4] Initializing /data/steve/Philips (Markus G)/302.TIF:
[testng] [2024-12-06 11:45:58,709] [pool-1-thread-11] Initializing /data/steve/Molecular Imaging/Mol Imag v4.18 (Reinat)/TwoDots.STP:
[testng] [2024-12-06 11:46:00,457] [pool-1-thread-1] Initializing /data/steve/Leica TCS (Keith B)/25_5BB.SXM:
[testng] [2024-12-06 11:46:02,357] [pool-1-thread-9] Initializing /data/steve/Molecular Imaging/Mol Imag v4.18 (Reinat)/car-mac-con-g_003.STP:
[testng] [2024-12-06 11:46:03,035] [pool-1-thread-5] Initializing /data/steve/Burleigh/Burleigh v2/Burleigh v2 (Phil W)/0_h4_3.img:
[testng]
[testng] ===============================================
[testng] Bio-Formats software test suite
[testng] Total tests run: 8480, Failures: 0, Skips: 0
[testng] ===============================================
[testng]
BUILD SUCCESSFUL
Total time: 11 minutes 33 seconds
Finished: SUCCESS