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Started by upstream project "BIOFORMATS-test-repo" build number 284 originally caused by: Started by upstream project "Trigger" build number 303 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@5 [BIOFORMATS-test-folder@5] $ /bin/bash -xe /tmp/jenkins6188482775899703616.sh + '[' misc = slidebook ']' ++ date +%u + '[' 7 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_44865_merge_ci -v /uod/idr/repos/curated/misc:/data -v /uod/idr-scratch/merge-ci/curated/misc:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] 1 warning test-automated: [testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket [testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket [testng] File leak detector installed [testng] 03:08:59,121 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 03:08:59,188 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 03:08:59,210 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 03:08:59,210 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 03:08:59,220 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 03:08:59,220 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 03:08:59,220 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 03:08:59,220 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 03:08:59,220 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@5d534f5d - End of configuration. [testng] 03:08:59,221 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@51c668e3 - Registering current configuration as safe fallback point [testng] 03:08:59,221 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2e6a8155 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 448 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-12-08 03:08:59,230] [main] java.version = 17.0.2 [testng] 03:08:59,233 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 03:08:59,233 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:08:59,381 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-12-08_03-08-59.log] [testng] 03:08:59,383 |-INFO in ch.qos.logback.core.sift.SiftProcessor@798162bc - End of configuration. [testng] [2024-12-08 03:08:59,458] [main] testng.directory = /data [testng] [2024-12-08 03:08:59,458] [main] testng.configDirectory = /config [testng] [2024-12-08 03:08:59,589] [main] testng.multiplier = 1.0 [testng] [2024-12-08 03:08:59,590] [main] testng.in-memory = false [testng] [2024-12-08 03:08:59,590] [main] testng.allow-missing = false [testng] [2024-12-08 03:08:59,590] [main] user.language = en [testng] [2024-12-08 03:08:59,590] [main] user.country = ${user.country} [testng] [2024-12-08 03:08:59,590] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2024-12-08 03:09:15,056] [main] ---------------------------------------- [testng] [2024-12-08 03:09:15,056] [main] Total files: 30 [testng] [2024-12-08 03:09:15,057] [main] Scan time: 15.466 s (515 ms/file) [testng] [2024-12-08 03:09:15,057] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 10 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-12-08 03:09:37,013] [pool-1-thread-1] Initializing /data/curtis/rosat.pic: [testng] 03:09:37,013 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 03:09:37,013 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:09:37,015 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-12-08_03-09-37.log] [testng] 03:09:37,015 |-INFO in ch.qos.logback.core.sift.SiftProcessor@22166714 - End of configuration. [testng] [2024-12-08 03:09:37,251] [pool-1-thread-10] Initializing /data/curtis/m51.tif: [testng] 03:09:37,251 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 03:09:37,251 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:09:37,252 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-12-08_03-09-37.log] [testng] 03:09:37,252 |-INFO in ch.qos.logback.core.sift.SiftProcessor@558bf44a - End of configuration. [testng] [2024-12-08 03:09:37,748] [pool-1-thread-9] Initializing /data/curtis/ssecsm.gif: [testng] 03:09:37,749 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 03:09:37,749 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:09:37,749 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-12-08_03-09-37.log] [testng] 03:09:37,750 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1567d8a4 - End of configuration. [testng] [2024-12-08 03:09:37,796] [pool-1-thread-8] Initializing /data/curtis/cloud.tiff: [testng] 03:09:37,796 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 03:09:37,796 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:09:37,797 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-12-08_03-09-37.log] [testng] 03:09:37,797 |-INFO in ch.qos.logback.core.sift.SiftProcessor@51a76514 - End of configuration. [testng] [2024-12-08 03:09:38,259] [pool-1-thread-7] Initializing /data/curtis/bill.gif: [testng] 03:09:38,260 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 03:09:38,260 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:09:38,261 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-12-08_03-09-38.log] [testng] 03:09:38,261 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7e7b788d - End of configuration. [testng] [2024-12-08 03:09:38,307] [pool-1-thread-6] Initializing /data/curtis/penguin.jpg: [testng] 03:09:38,307 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 03:09:38,307 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:09:38,308 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-12-08_03-09-38.log] [testng] 03:09:38,308 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5a28a7e - End of configuration. [testng] [2024-12-08 03:09:38,492] [pool-1-thread-5] Initializing /data/curtis/bill.jpg: [testng] 03:09:38,492 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 03:09:38,492 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:09:38,493 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-12-08_03-09-38.log] [testng] 03:09:38,493 |-INFO in ch.qos.logback.core.sift.SiftProcessor@20e7c04d - End of configuration. [testng] [2024-12-08 03:09:38,545] [pool-1-thread-4] Initializing /data/curtis/penguin.tiff: [testng] 03:09:38,545 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 03:09:38,546 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:09:38,546 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-12-08_03-09-38.log] [testng] 03:09:38,547 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6493b69a - End of configuration. [testng] [2024-12-08 03:09:39,683] [pool-1-thread-3] Initializing /data/curtis/images.tiff: [testng] 03:09:39,683 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 03:09:39,683 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:09:39,684 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-12-08_03-09-39.log] [testng] 03:09:39,685 |-INFO in ch.qos.logback.core.sift.SiftProcessor@149b0719 - End of configuration. [testng] [2024-12-08 03:09:40,174] [pool-1-thread-2] Initializing /data/curtis/johan.gif: [testng] 03:09:40,174 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 03:09:40,174 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:09:40,175 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-12-08_03-09-40.log] [testng] 03:09:40,175 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4a22ad60 - End of configuration. [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 530, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 53 seconds Finished: SUCCESS