Started by upstream project "BIOFORMATS-test-repo" build number 288
originally caused by:
 Started by upstream project "Trigger" build number 307
 originally caused by:
  Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@5
[BIOFORMATS-test-folder@5] $ /bin/bash -xe /tmp/jenkins5289286439391258793.sh
+ '[' sxm = slidebook ']'
++ date +%u
+ '[' 4 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_45510_merge_ci -v /uod/idr/repos/curated/sxm:/data -v /uod/idr-scratch/merge-ci/curated/sxm:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
     [echo] isSnapshot = true

init-title:
     [echo] ----------=========== bio-formats-testing-framework ===========----------

init-timestamp:

init:

copy-resources:

compile:
[resolver:resolve] Resolving artifacts

compile-tests:
[resolver:resolve] Resolving artifacts
    [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
    [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
    [javac] warning: [options] source value 8 is obsolete and will be removed in a future release
    [javac] warning: [options] target value 8 is obsolete and will be removed in a future release
    [javac] warning: [options] To suppress warnings about obsolete options, use -Xlint:-options.
    [javac] 4 warnings

test-automated:
   [testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket
   [testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket
   [testng] File leak detector installed
   [testng] 03:35:42,350 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
   [testng] 03:35:42,351 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - No custom configurators were discovered as a service.
   [testng] 03:35:42,351 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 03:35:42,352 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 03:35:42,353 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
   [testng] 03:35:42,353 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
   [testng] 03:35:42,353 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
   [testng] 03:35:42,353 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 03:35:42,354 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 03:35:42,354 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
   [testng] 03:35:42,355 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
   [testng] 03:35:42,355 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
   [testng] 03:35:42,511 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
   [testng] 03:35:42,511 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
   [testng] 03:35:42,536 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
   [testng] 03:35:42,536 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
   [testng] 03:35:42,543 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
   [testng] 03:35:42,543 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
   [testng] 03:35:42,543 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
   [testng] 03:35:42,543 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
   [testng] 03:35:42,543 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@29215f06 - End of configuration.
   [testng] 03:35:42,544 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@b9b00e0 - Registering current configuration as safe fallback point
   [testng] 03:35:42,544 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 190 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
   [testng] [2024-12-12 03:35:42,553] [main] java.version = 21
   [testng] 03:35:42,556 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
   [testng] 03:35:42,556 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 03:35:42,600 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-12-12_03-35-42.log]
   [testng] 03:35:42,601 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1b919693 - End of configuration.
   [testng] [2024-12-12 03:35:42,603] [main] testng.directory = /data
   [testng] [2024-12-12 03:35:42,603] [main] testng.configDirectory = /config
   [testng] [2024-12-12 03:35:42,612] [main] testng.multiplier = 1.0
   [testng] [2024-12-12 03:35:42,613] [main] testng.in-memory = false
   [testng] [2024-12-12 03:35:42,613] [main] testng.allow-missing = false
   [testng] [2024-12-12 03:35:42,613] [main] user.language = en
   [testng] [2024-12-12 03:35:42,613] [main] user.country = ${user.country}
   [testng] [2024-12-12 03:35:42,613] [main] Maximum heap size = 15360 MB
   [testng] Scanning for files...
   [testng] [2024-12-12 03:43:49,635] [main] ----------------------------------------
   [testng] [2024-12-12 03:43:49,635] [main] Total files: 268
   [testng] [2024-12-12 03:43:49,635] [main] Scan time: 487.022 s (1817 ms/file)
   [testng] [2024-12-12 03:43:49,636] [main] ----------------------------------------
   [testng] Building list of tests...
   [testng] Ready to test 160 files
   [testng] [TestNG] Running:
   [testng]   Bio-Formats software test suite
   [testng] 
   [testng] [2024-12-12 03:56:20,457] [pool-1-thread-1] Initializing /data/steve/Misc SXM test images/Hough transform/Dale's bubbles: 
   [testng] 03:56:20,457 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
   [testng] 03:56:20,457 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 03:56:20,459 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-12-12_03-56-20.log]
   [testng] 03:56:20,459 |-INFO in ch.qos.logback.core.sift.SiftProcessor@70401a4c - End of configuration.
   [testng] [2024-12-12 03:56:24,498] [pool-1-thread-12] Initializing /data/steve/TopoMetrix/Topo STM (Liam McD)/GRID1.TFR: 
   [testng] 03:56:24,498 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
   [testng] 03:56:24,498 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 03:56:24,499 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-12-12_03-56-24.log]
   [testng] 03:56:24,500 |-INFO in ch.qos.logback.core.sift.SiftProcessor@451ab8bc - End of configuration.
   [testng] [2024-12-12 03:56:25,538] [pool-1-thread-11] Initializing /data/steve/JEOL/WinSem (Sue)/Shuttle tile ceramic/SHUTTLEA.IMG: 
   [testng] 03:56:25,538 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
   [testng] 03:56:25,538 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 03:56:25,539 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-12-12_03-56-25.log]
   [testng] 03:56:25,540 |-INFO in ch.qos.logback.core.sift.SiftProcessor@eeb3180 - End of configuration.
   [testng] [2024-12-12 03:56:27,131] [pool-1-thread-10] Initializing /data/steve/VG SAM (Karen)/PEAK.DTI: 
   [testng] 03:56:27,131 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
   [testng] 03:56:27,131 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 03:56:27,132 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-12-12_03-56-27.log]
   [testng] 03:56:27,132 |-INFO in ch.qos.logback.core.sift.SiftProcessor@357c99d2 - End of configuration.
   [testng] [2024-12-12 03:56:28,095] [pool-1-thread-9] Initializing /data/steve/RHK Tech/RHK (Mark Flowers)/Demo07.sm2: 
   [testng] 03:56:28,095 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
   [testng] 03:56:28,095 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 03:56:28,096 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-12-12_03-56-28.log]
   [testng] 03:56:28,096 |-INFO in ch.qos.logback.core.sift.SiftProcessor@c09ad03 - End of configuration.
   [testng] [2024-12-12 03:56:29,204] [pool-1-thread-8] Initializing /data/steve/TopoMetrix/Topo SFM (SC)/PA2.TFR: 
   [testng] 03:56:29,204 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
   [testng] 03:56:29,204 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 03:56:29,205 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-12-12_03-56-29.log]
   [testng] 03:56:29,205 |-INFO in ch.qos.logback.core.sift.SiftProcessor@404b89a - End of configuration.
   [testng] [2024-12-12 03:56:30,240] [pool-1-thread-7] Initializing /data/steve/JPK Instr (Christian L)/Anti-reflex-coating.jpk: 
   [testng] 03:56:30,240 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
   [testng] 03:56:30,240 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 03:56:30,240 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-12-12_03-56-30.log]
   [testng] 03:56:30,241 |-INFO in ch.qos.logback.core.sift.SiftProcessor@aaa485f - End of configuration.
   [testng] [2024-12-12 03:56:32,176] [pool-1-thread-6] Initializing /data/steve/RHK Tech/RHK-XPM Pro (Lydie L)/B70417000K.SM3: 
   [testng] 03:56:32,176 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
   [testng] 03:56:32,176 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 03:56:32,177 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-12-12_03-56-32.log]
   [testng] 03:56:32,177 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2a1a7c3b - End of configuration.
   [testng] [2024-12-12 03:56:33,493] [pool-1-thread-5] Initializing /data/steve/TopoMetrix/Topo SFM (SC)/IM_P1.TFR: 
   [testng] 03:56:33,493 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
   [testng] 03:56:33,493 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 03:56:33,494 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-12-12_03-56-33.log]
   [testng] 03:56:33,494 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1a02f3df - End of configuration.
   [testng] [2024-12-12 03:56:34,747] [pool-1-thread-4] Initializing /data/steve/JEOL/WinSem (Sue)/Shuttle tile ceramic/SHUTTLEE.IMG: 
   [testng] 03:56:34,748 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
   [testng] 03:56:34,748 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 03:56:34,748 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-12-12_03-56-34.log]
   [testng] 03:56:34,748 |-INFO in ch.qos.logback.core.sift.SiftProcessor@310ce61b - End of configuration.
   [testng] [2024-12-12 03:56:36,741] [pool-1-thread-3] Initializing /data/steve/Philips (Markus G)/135-31.IMG: 
   [testng] 03:56:36,741 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
   [testng] 03:56:36,741 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 03:56:36,742 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-12-12_03-56-36.log]
   [testng] 03:56:36,742 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3159d662 - End of configuration.
   [testng] [2024-12-12 03:56:37,944] [pool-1-thread-2] Initializing /data/steve/JEOL/WinSem (Sue)/Shuttle tile ceramic/SHUTTLED.IMG: 
   [testng] 03:56:37,944 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
   [testng] 03:56:37,944 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 03:56:37,945 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-12-12_03-56-37.log]
   [testng] 03:56:37,945 |-INFO in ch.qos.logback.core.sift.SiftProcessor@666cff1f - End of configuration.
   [testng] [2024-12-12 03:56:50,185] [pool-1-thread-10] Initializing /data/steve/Burleigh/Burleigh v2/Burleigh v2 (Phil W)/0_h4_3.img: 
   [testng] [2024-12-12 03:56:54,839] [pool-1-thread-5] Initializing /data/steve/Molecular Imaging/Mol Imag v4.18 (Reinat)/npc-liq-sharO_003.STP: 
   [testng] [2024-12-12 03:56:56,017] [pool-1-thread-3] Initializing /data/steve/Gatan/Gatan Mac (Guy Mayor)/Digital Micrograph 3.4: 
   [testng] [2024-12-12 03:56:56,555] [pool-1-thread-8] Initializing /data/steve/Burleigh/Burleigh v2/Burleigh v2 (Phil W)/0_h4_4.img: 
   [testng] [2024-12-12 03:57:00,441] [pool-1-thread-12] Initializing /data/steve/FITS/M13.fits: 
   [testng] [2024-12-12 03:57:00,740] [pool-1-thread-9] Initializing /data/steve/Quesant Instr/Quesant v1.2 (Marc F)/stm1.afm: 
   [testng] [2024-12-12 03:57:01,905] [pool-1-thread-6] Initializing /data/steve/Misc SXM test images/Chromosome images/Chironomus2.pict: 
   [testng] [2024-12-12 03:57:04,709] [pool-1-thread-7] Initializing /data/steve/Gatan/Gatan TIFF/THE FLY 4 TIFF: 
   [testng] [2024-12-12 03:57:11,302] [pool-1-thread-12] Initializing /data/steve/Molecular Imaging/Mol Imag v5.0 (Lionel S)/Cu#18-NaOH-035.STP: 
   [testng] [2024-12-12 03:57:13,851] [pool-1-thread-3] Initializing /data/steve/Molecular Imaging/Mol Imag v5.2 (Steve Higgins)/014.STP: 
   [testng] [2024-12-12 03:57:15,822] [pool-1-thread-6] Initializing /data/steve/Gatan/Gatan PC (Eric Leroy)/Iron map 10.dm3: 
   [testng] [2024-12-12 03:57:17,524] [pool-1-thread-4] Initializing /data/steve/Targa/Test.TGA: 
   [testng] [2024-12-12 03:57:18,535] [pool-1-thread-11] Initializing /data/steve/Misc SXM test images/Fake STM/Fake STM (8 rpts) TIFF: 
   [testng] [2024-12-12 03:57:22,615] [pool-1-thread-2] Initializing /data/steve/JEOL/WinSem (Sue)/Shuttle tile ceramic/SHUTTLEC.IMG: 
   [testng] [2024-12-12 03:57:24,518] [pool-1-thread-9] Initializing /data/steve/Quesant Instr/Quesant v1.2 (Marc F)/afm1.afm: 
   [testng] [2024-12-12 03:57:25,693] [pool-1-thread-5] Initializing /data/steve/Misc SXM test images/Stacks/DoF test stack (Ahnelt): 
   [testng] [2024-12-12 03:57:30,063] [pool-1-thread-1] Initializing /data/steve/Hamamatsu (Keith B)/HIS-16bit-nopack.HIS: 
   [testng] [2024-12-12 03:57:34,555] [pool-1-thread-6] Initializing /data/steve/FITS/Meade DSI/M31bG1.fts: 
   [testng] [2024-12-12 03:57:35,046] [pool-1-thread-12] Initializing /data/steve/JEOL/SPM (Hiroyuki Isobe)/990304j.tif: 
   [testng] [2024-12-12 03:57:40,484] [pool-1-thread-3] Initializing /data/steve/RHK Tech/RHK (Bob Baker)/Examp_03.SM2: 
   [testng] [2024-12-12 03:57:42,200] [pool-1-thread-6] Initializing /data/steve/Zeiss LSM/Zeiss LSM (John S)/Zeiss LSM 1 sample:pixel/ug6stack3.lsm: 
   [testng] [2024-12-12 03:57:46,148] [pool-1-thread-4] Initializing /data/steve/FITS/M51.fits: 
   [testng] [2024-12-12 03:57:46,555] [pool-1-thread-9] Initializing /data/steve/Burleigh/Burleigh v2/Burleigh v2 (Phil W)/1_2h2_3.img: 
   [testng] [2024-12-12 03:57:50,289] [pool-1-thread-10] Initializing /data/steve/FITS/Meade DSI/M31bB1.fts: 
   [testng] [2024-12-12 03:57:50,654] [pool-1-thread-8] Initializing /data/steve/Gatan/Gatan (Patrick Burton)/PDB_DARK_25k.dm2: 
   [testng] [2024-12-12 03:57:51,455] [pool-1-thread-1] Initializing /data/steve/TIFF/HAFF SEM: 
   [testng] [2024-12-12 03:57:55,864] [pool-1-thread-7] Initializing /data/steve/JEOL/SPM (Hiroyuki Isobe)/HOPG.tif: 
   [testng] [2024-12-12 03:58:02,169] [pool-1-thread-4] Initializing /data/steve/Oxford Instr (Yoshimasa)/98042103.TIF: 
   [testng] [2024-12-12 03:58:05,589] [pool-1-thread-11] Initializing /data/steve/RHK Tech/RHK (Mark Flowers)/Silicon.sm2: 
   [testng] [2024-12-12 03:58:07,142] [pool-1-thread-3] Initializing /data/steve/TopoMetrix/Topo SFM (SC)/FFT test: 
   [testng] [2024-12-12 03:58:12,134] [pool-1-thread-2] Initializing /data/steve/TIFF/CONCRETE TIFF: 
   [testng] [2024-12-12 03:58:18,754] [pool-1-thread-10] Initializing /data/steve/Molecular Imaging/Mol Imag v4.19 (Michael Z)/Wafer_vesicles_2min_010.STP: 
   [testng] [2024-12-12 03:58:20,189] [pool-1-thread-5] Initializing /data/steve/TopoMetrix/Topo STM v5 (Ewald B)/c80-50zfr.tif: 
   [testng] [2024-12-12 03:58:25,288] [pool-1-thread-8] Initializing /data/steve/JEOL/JSM (Inger Ekvell)/g11@0.IMG: 
   [testng] [2024-12-12 03:58:27,277] [pool-1-thread-12] Initializing /data/steve/Seiko Instr (Hwansoo)/05808001-2.xqd: 
   [testng] [2024-12-12 03:58:28,488] [pool-1-thread-6] Initializing /data/steve/JEOL/SPM (Hiroyuki Isobe)/JEOL3.tif: 
   [testng] [2024-12-12 03:58:32,726] [pool-1-thread-11] Initializing /data/steve/Quesant Instr/Quesant v2.0 (Hal E)/03-17-05A.afm: 
   [testng] [2024-12-12 03:58:36,670] [pool-1-thread-7] Initializing /data/steve/Molecular Imaging/Mol Imag v4.18 (Reinat)/TwoDots.STP: 
   [testng] [2024-12-12 03:58:37,950] [pool-1-thread-10] Initializing /data/steve/TIFF/Macrophage cell images/T08-08 1600 24-bit.tif: 
   [testng] [2024-12-12 03:58:41,652] [pool-1-thread-4] Initializing /data/steve/TIFF/Macrophage cell images/D1-A-1 1392 36-bit.tif: 
   [testng] [2024-12-12 03:58:43,433] [pool-1-thread-9] Initializing /data/steve/SBIG/M81 H 250s Tr=5s: 
   [testng] [2024-12-12 03:58:48,659] [pool-1-thread-1] Initializing /data/steve/TIFF/8MAR03A.TIFF: 
   [testng] [2024-12-12 03:58:53,221] [pool-1-thread-3] Initializing /data/steve/Bio-Rad (Nico Lindegger)/b.PIC: 
   [testng] [2024-12-12 03:58:55,092] [pool-1-thread-2] Initializing /data/steve/Gatan/TEM (Larry Thomas)/TEM 10 KX: 
   [testng] [2024-12-12 03:58:59,264] [pool-1-thread-12] Initializing /data/steve/JEOL/SPM (Masashi N)/FFM204.TIF: 
   [testng] [2024-12-12 03:59:04,936] [pool-1-thread-8] Initializing /data/steve/UBM (Rosset)/SG2.PR3: 
   [testng] [2024-12-12 03:59:07,139] [pool-1-thread-11] Initializing /data/steve/SBIG/M82 H 100s Tr=10s: 
   [testng] [2024-12-12 03:59:12,047] [pool-1-thread-7] Initializing /data/steve/TopoMetrix/Topo STM v4 (Gabriella)/159HF02.ZFP: 
   [testng] [2024-12-12 03:59:13,410] [pool-1-thread-5] Initializing /data/steve/Leica TCS (Keith B)/25_5BJ.SXM: 
   [testng] [2024-12-12 03:59:18,519] [pool-1-thread-2] Initializing /data/steve/Misc SXM test images/Chromosome images/HKGmaizeMei3.pict: 
   [testng] [2024-12-12 03:59:19,669] [pool-1-thread-6] Initializing /data/steve/Misc SXM test images/Chromosome images/HRhuman1.pict: 
   [testng] [2024-12-12 03:59:22,123] [pool-1-thread-3] Initializing /data/steve/Gatan/Gatan (Sue D)/Honey Bee: 
   [testng] [2024-12-12 03:59:24,456] [pool-1-thread-8] Initializing /data/steve/JEOL/WinSem (Sue)/RICK1.IMG: 
   [testng] [2024-12-12 03:59:26,462] [pool-1-thread-4] Initializing /data/steve/JEOL/WinSem (Sue)/TA.IMG: 
   [testng] [2024-12-12 03:59:29,797] [pool-1-thread-7] Initializing /data/steve/TopoMetrix/Topo MFM (SC)/NDPOL-01.TFR: 
   [testng] [2024-12-12 03:59:32,263] [pool-1-thread-1] Initializing /data/steve/TopoMetrix/Topo STM v5 (Ewald B)/c80-50.zfr: 
   [testng] [2024-12-12 03:59:33,867] [pool-1-thread-2] Initializing /data/steve/Misc SXM test images/Stacks/Fred's stack: 
   [testng] [2024-12-12 03:59:38,897] [pool-1-thread-9] Initializing /data/steve/Gatan/Gatan PC (Eric Leroy)/BF super alliage.dm3: 
   [testng] [2024-12-12 03:59:39,659] [pool-1-thread-10] Initializing /data/steve/Gatan/Gatan Mac (Guy Mayor)/Digital Micrograph 2.5: 
   [testng] [2024-12-12 03:59:40,564] [pool-1-thread-6] Initializing /data/steve/Misc SXM test images/Chromosome images/HKGmaizeMitose5.pict: 
   [testng] [2024-12-12 03:59:41,812] [pool-1-thread-3] Initializing /data/steve/RHK Tech/RHK (Bob Baker)/Examp_01.SM2: 
   [testng] [2024-12-12 03:59:43,479] [pool-1-thread-12] Initializing /data/steve/Quesant Instr/Quesant v2.0 (Brad Taft)/03031020.afm: 
   [testng] [2024-12-12 03:59:44,986] [pool-1-thread-11] Initializing /data/steve/Hamamatsu (Keith B)/HIS-12bit-1a.HIS: 
   [testng] [2024-12-12 03:59:50,106] [pool-1-thread-9] Initializing /data/steve/Misc SXM test images/AVI movie/Clean Cu(110) LEED.avi: 
   [testng] [2024-12-12 03:59:51,408] [pool-1-thread-7] Initializing /data/steve/Quesant Instr/Quesant v1.2 (Marc F)/afm3.afm: 
   [testng] [2024-12-12 03:59:53,329] [pool-1-thread-10] Initializing /data/steve/RHK Tech/RHK (Bob Baker)/SCREEN1.PICT: 
   [testng] [2024-12-12 03:59:54,943] [pool-1-thread-5] Initializing /data/steve/RHK Tech/RHK (Bob Baker)/Examp_02.SM2: 
   [testng] [2024-12-12 03:59:56,821] [pool-1-thread-1] Initializing /data/steve/Zeiss LSM/Zeiss LSM (Ewald B)/FGD006.TIF: 
   [testng] [2024-12-12 04:00:02,451] [pool-1-thread-6] Initializing /data/steve/Seiko Instr (Hwansoo)/05808001-3.xqd: 
   [testng] [2024-12-12 04:00:04,872] [pool-1-thread-12] Initializing /data/steve/Seiko Instr (Hwansoo)/05808001.xqd: 
   [testng] [2024-12-12 04:00:06,487] [pool-1-thread-3] Initializing /data/steve/Zeiss LSM/Zeiss LSM (Ewald B)/NIALDIAN.TIF: 
   [testng] [2024-12-12 04:00:14,613] [pool-1-thread-4] Initializing /data/steve/SM-Camera/Orhan + IPES rig: 
   [testng] [2024-12-12 04:00:19,941] [pool-1-thread-8] Initializing /data/steve/Zeiss LSM/Zeiss LSM (John S)/Zeiss LSM 2 samples:pixel/coltubfitc1proj.lsm: 
   [testng] [2024-12-12 04:00:22,771] [pool-1-thread-11] Initializing /data/steve/VG SAM (Karen)/BGND.DTI: 
   [testng] [2024-12-12 04:00:24,771] [pool-1-thread-9] Initializing /data/steve/RHK Tech/RHK STS (Peter Sloan)/SloanSpec.SM2: 
   [testng] [2024-12-12 04:00:26,935] [pool-1-thread-7] Initializing /data/steve/RHK Tech/RHK STS (Peter Sloan)/B50303AS.SM2: 
   [testng] [2024-12-12 04:00:29,969] [pool-1-thread-6] Initializing /data/steve/FITS/M104.fits: 
   [testng] [2024-12-12 04:00:30,734] [pool-1-thread-10] Initializing /data/steve/Gatan/Gatan (Sue D)/SEM 500X (Larry): 
   [testng] [2024-12-12 04:00:31,936] [pool-1-thread-5] Initializing /data/steve/Hamamatsu (Keith B)/HIS-16bit-packed.HIS: 
   [testng] [2024-12-12 04:00:33,959] [pool-1-thread-2] Initializing /data/steve/Philips (Markus G)/135-30.IMG: 
   [testng] [2024-12-12 04:00:35,608] [pool-1-thread-12] Initializing /data/steve/TIFF/Little owl TIFF: 
   [testng] [2024-12-12 04:00:43,899] [pool-1-thread-6] Initializing /data/steve/JEOL/WinSem (Sue)/Shuttle tile ceramic/SHUTTLEB.IMG: 
   [testng] [2024-12-12 04:00:46,653] [pool-1-thread-11] Initializing /data/steve/Quesant Instr/Quesant v1.2 (Marc F)/afm2.afm: 
   [testng] [2024-12-12 04:00:48,504] [pool-1-thread-9] Initializing /data/steve/JEOL/WinSem (Sue)/BALLS.IMG: 
   [testng] [2024-12-12 04:00:50,857] [pool-1-thread-8] Initializing /data/steve/TopoMetrix/Topo SFM (SC)/PA7.TFR: 
   [testng] [2024-12-12 04:00:52,658] [pool-1-thread-7] Initializing /data/steve/Gatan/Gatan (Sue D)/WOODLOUSE: 
   [testng] [2024-12-12 04:00:53,775] [pool-1-thread-10] Initializing /data/steve/RHK Tech/RHK (Mark Flowers)/Demo04.sm2: 
   [testng] [2024-12-12 04:00:56,118] [pool-1-thread-1] Initializing /data/steve/Gatan/Gatan TIFF/Si CHIP TIFF: 
   [testng] [2024-12-12 04:01:02,158] [pool-1-thread-5] Initializing /data/steve/RHK Tech/RHK (Bob Baker)/Examp_04.SM2: 
   [testng] [2024-12-12 04:01:04,666] [pool-1-thread-3] Initializing /data/steve/Philips (Markus G)/135-32.IMG: 
   [testng] [2024-12-12 04:01:06,687] [pool-1-thread-2] Initializing /data/steve/RHK Tech/RHK (Bob Baker)/Examp_05.SM2: 
   [testng] [2024-12-12 04:01:11,328] [pool-1-thread-4] Initializing /data/steve/Philips (Markus G)/302.TIF: 
   [testng] [2024-12-12 04:01:20,635] [pool-1-thread-7] Initializing /data/steve/Quesant Instr/Quesant v1.2 (Marc F)/stm3.afm: 
   [testng] [2024-12-12 04:01:24,803] [pool-1-thread-11] Initializing /data/steve/Philips (Markus G)/135-33.IMG: 
   [testng] [2024-12-12 04:01:29,721] [pool-1-thread-10] Initializing /data/steve/TIFF/CD-ROM TIFF: 
   [testng] [2024-12-12 04:01:38,919] [pool-1-thread-8] Initializing /data/steve/Gatan/Gatan PC (Eric Leroy)/Oxygen map 1.dm3: 
   [testng] [2024-12-12 04:01:41,498] [pool-1-thread-2] Initializing /data/steve/Molecular Imaging/Mol Imag v4.18 (Reinat)/car-mac-con-g_003.STP: 
   [testng] [2024-12-12 04:01:43,888] [pool-1-thread-5] Initializing /data/steve/Zeiss LSM/Zeiss LSM (John S)/Zeiss LSM 1 sample:pixel/ug6proj3.lsm: 
   [testng] [2024-12-12 04:01:47,323] [pool-1-thread-3] Initializing /data/steve/JEOL/SPM (Hiroyuki Isobe)/990301c.tif: 
   [testng] [2024-12-12 04:01:54,838] [pool-1-thread-6] Initializing /data/steve/Leica TCS (Keith B)/25_5BB.SXM: 
   [testng] [2024-12-12 04:02:01,079] [pool-1-thread-9] Initializing /data/steve/Unisoku (Takashi)/Sample.HDR: 
   [testng] [2024-12-12 04:02:05,015] [pool-1-thread-12] Initializing /data/steve/SM-Camera/W(110)+Fe,5nA,30min@110eV: 
   [testng] [2024-12-12 04:02:18,650] [pool-1-thread-7] Initializing /data/steve/Seiko Instr (Hwansoo)/05808002.xqf: 
   [testng] [2024-12-12 04:02:21,349] [pool-1-thread-11] Initializing /data/steve/Hamamatsu (Keith B)/HIS-12bit-2b.HIS: 
   [testng] [2024-12-12 04:02:24,077] [pool-1-thread-8] Initializing /data/steve/Oxford Instr (Yoshimasa)/98042103.top: 
   [testng] [2024-12-12 04:02:31,702] [pool-1-thread-4] Initializing /data/steve/TIFF/Macrophage cell images/T24-24 1600 36_48-bit.tif: 
   [testng] [2024-12-12 04:02:39,043] [pool-1-thread-1] Initializing /data/steve/TopoMetrix/Topo STM v5 (Ewald B)/c80-50ffr.tif: 
   [testng] [2024-12-12 04:02:47,398] [pool-1-thread-2] Initializing /data/steve/Misc SXM test images/BMP images/m20_p.bmp: 
   [testng] [2024-12-12 04:02:49,841] [pool-1-thread-5] Initializing /data/steve/Quesant Instr/Quesant v2.0 (Hal E)/2-18-05A.afm: 
   [testng] [2024-12-12 04:02:52,604] [pool-1-thread-10] Initializing /data/steve/JEOL/SPM (Masashi N)/AFM204.TIF: 
   [testng] [2024-12-12 04:03:02,250] [pool-1-thread-7] Initializing /data/steve/JPK Instr (Christian L)/Titanium-implant.jpk: 
   [testng] [2024-12-12 04:03:05,675] [pool-1-thread-3] Initializing /data/steve/Burleigh/Burleigh v1/Burleigh.IMG: 
   [testng] [2024-12-12 04:03:13,571] [pool-1-thread-8] Initializing /data/steve/Gatan/Gatan TIFF/BALL TIFF: 
   [testng] [2024-12-12 04:03:19,871] [pool-1-thread-11] Initializing /data/steve/Zeiss LSM/Zeiss LSM - 2 samp:pix (??)/16bcutagain.lsm: 
   [testng] [2024-12-12 04:03:22,697] [pool-1-thread-12] Initializing /data/steve/TIFF/Macrophage cell images/Pre-d-0 1392 36-bit.tif: 
   [testng] [2024-12-12 04:03:25,207] [pool-1-thread-6] Initializing /data/steve/Misc SXM test images/Hough transform/Nathalie's test: 
   [testng] [2024-12-12 04:03:32,913] [pool-1-thread-2] Initializing /data/steve/Quesant Instr/Quesant v2.0 (Brad Taft)/03031004.afm: 
   [testng] [2024-12-12 04:03:37,945] [pool-1-thread-5] Initializing /data/steve/Quesant Instr/Quesant v1.2 (Marc F)/stm2.afm: 
   [testng] [2024-12-12 04:03:45,200] [pool-1-thread-7] Initializing /data/steve/JEOL/WinSem (Sue)/CONCRETE.IMG: 
   [testng] [2024-12-12 04:03:48,461] [pool-1-thread-9] Initializing /data/steve/Zeiss LSM/Zeiss LSM (John S)/Zeiss LSM 2 samples:pixel/coltubfitc1.lsm: 
   [testng] [2024-12-12 04:03:51,695] [pool-1-thread-1] Initializing /data/steve/RHK Tech/RHK IV (Koji N)/02042603.sm2: 
   [testng] [2024-12-12 04:03:53,599] [pool-1-thread-11] Initializing /data/steve/JPK Instr (Christian L)/Virus.jpk: 
   [testng] [2024-12-12 04:03:57,117] [pool-1-thread-2] Initializing /data/steve/RHK Tech/RHK-XPM Pro (Lydie L)/B70417000Q.SM3: 
   [testng] [2024-12-12 04:03:58,741] [pool-1-thread-4] Initializing /data/steve/Gatan/Gatan (Patrick Burton)/PDB_DARK_25k.dm3: 
   [testng] [2024-12-12 04:03:59,666] [pool-1-thread-3] Initializing /data/steve/Gatan/Gatan (Sue D)/THE FLY 3: 
   [testng] [2024-12-12 04:04:00,915] [pool-1-thread-10] Initializing /data/steve/Misc SXM test images/Fake STM/Fake STM (4 rpts) TIFF: 
   [testng] [2024-12-12 04:04:10,288] [pool-1-thread-5] Initializing /data/steve/Molecular Imaging/Mol Imag v5.2 (Steve Higgins)/015.STP: 
   [testng] [2024-12-12 04:04:13,869] [pool-1-thread-12] Initializing /data/steve/TopoMetrix/Topo STM v5 (Ewald B)/c80-50.ffr: 
   [testng] [2024-12-12 04:04:16,320] [pool-1-thread-4] Initializing /data/steve/Philips (Markus G)/302.IMG: 
   [testng] [2024-12-12 04:04:20,848] [pool-1-thread-6] Initializing /data/steve/TIFF/Hough test TIFF: 
   [testng] [2024-12-12 04:04:27,673] [pool-1-thread-8] Initializing /data/steve/FITS/Meade DSI/M31bR1.fts: 
   [testng] [2024-12-12 04:04:28,422] [pool-1-thread-1] Initializing /data/steve/TIFF/ta269 TIFF: 
   [testng] [2024-12-12 04:04:36,127] [pool-1-thread-2] Initializing /data/steve/Hamamatsu (Keith B)/HIS-8bit.HIS: 
   [testng] [2024-12-12 04:04:38,131] [pool-1-thread-3] Initializing /data/steve/Gatan/Gatan (Sue D)/THE FLY: 
   [testng] [2024-12-12 04:04:40,590] [pool-1-thread-7] Initializing /data/steve/Gatan/Gatan (Sue D)/THE FLY A: 
   [testng] [2024-12-12 04:04:45,874] [pool-1-thread-9] Initializing /data/steve/RHK Tech/RHK (Oliver Leifeld)/SM02_08.SM2: 
   [testng] [2024-12-12 04:04:50,057] [pool-1-thread-11] Initializing /data/steve/Oxford Instr (Yoshimasa)/80619a.top: 
   [testng] [2024-12-12 04:04:54,739] [pool-1-thread-5] Initializing /data/steve/JEOL/SEM (Steve Foulds)/IPS2000.DAT: 
   [testng] [2024-12-12 04:04:59,321] [pool-1-thread-4] Initializing /data/steve/TIFF/Macrophage cell images/RT1-f-24 1600 24-bit.tif: 
   [testng] [2024-12-12 04:05:09,052] [pool-1-thread-12] Initializing /data/steve/Bio-Rad (Nico Lindegger)/a.PIC: 
   [testng] [2024-12-12 04:05:13,703] [pool-1-thread-8] Initializing /data/steve/Burleigh/Burleigh v2/Graphite: 
   [testng] [2024-12-12 04:05:25,280] [pool-1-thread-7] Initializing /data/steve/TIFF/Macrophage cell images/T48-44 800 24-bit.tif: 
   [testng] [2024-12-12 04:05:32,085] [pool-1-thread-3] Initializing /data/steve/TIFF/ta123 stack TIFF: 
   [testng] [2024-12-12 04:05:41,168] [pool-1-thread-10] Initializing /data/steve/TopoMetrix/Topo MFM (SC)/NDR2-1.2FL: 
   [testng] [2024-12-12 04:05:43,577] [pool-1-thread-2] Initializing /data/steve/Gatan/Gatan (Sue D)/THE FLY 2: 
   [testng] [2024-12-12 04:05:50,903] [pool-1-thread-11] Initializing /data/steve/JEOL/WinSem (Sue)/SIC2.IMG: 
   [testng] [2024-12-12 04:05:54,052] [pool-1-thread-9] Initializing /data/steve/Hamamatsu (Keith B)/HIS-12bit-3.HIS: 
   [testng] [2024-12-12 04:05:57,025] [pool-1-thread-5] Initializing /data/steve/SBIG/M81 M 40s: 
   [testng] 
   [testng] ===============================================
   [testng] Bio-Formats software test suite
   [testng] Total tests run: 8480, Failures: 0, Skips: 0
   [testng] ===============================================
   [testng] 

BUILD SUCCESSFUL
Total time: 31 minutes 47 seconds
Finished: SUCCESS