Started by upstream project "BIOFORMATS-test-repo" build number 288
originally caused by:
 Started by upstream project "Trigger" build number 307
 originally caused by:
  Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@10
[BIOFORMATS-test-folder@10] $ /bin/bash -xe /tmp/jenkins18417937281461159278.sh
+ '[' imagepro = slidebook ']'
++ date +%u
+ '[' 4 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_45579_merge_ci -v /uod/idr/repos/curated/imagepro:/data -v /uod/idr-scratch/merge-ci/curated/imagepro:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
     [echo] isSnapshot = true

init-title:
     [echo] ----------=========== bio-formats-testing-framework ===========----------

init-timestamp:

init:

copy-resources:

compile:
[resolver:resolve] Resolving artifacts

compile-tests:
[resolver:resolve] Resolving artifacts
    [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
    [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
    [javac] warning: [options] source value 8 is obsolete and will be removed in a future release
    [javac] warning: [options] target value 8 is obsolete and will be removed in a future release
    [javac] warning: [options] To suppress warnings about obsolete options, use -Xlint:-options.
    [javac] 4 warnings

test-automated:
   [testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket
   [testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket
   [testng] File leak detector installed
   [testng] 11:30:37,464 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
   [testng] 11:30:37,466 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - No custom configurators were discovered as a service.
   [testng] 11:30:37,466 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 11:30:37,467 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 11:30:37,467 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
   [testng] 11:30:37,467 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
   [testng] 11:30:37,468 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
   [testng] 11:30:37,468 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 11:30:37,468 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 11:30:37,469 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
   [testng] 11:30:37,469 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
   [testng] 11:30:37,469 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
   [testng] 11:30:37,620 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
   [testng] 11:30:37,620 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
   [testng] 11:30:37,643 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
   [testng] 11:30:37,643 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
   [testng] 11:30:37,650 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
   [testng] 11:30:37,650 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
   [testng] 11:30:37,650 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
   [testng] 11:30:37,650 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
   [testng] 11:30:37,650 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@29215f06 - End of configuration.
   [testng] 11:30:37,651 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@b9b00e0 - Registering current configuration as safe fallback point
   [testng] 11:30:37,651 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 183 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
   [testng] [2024-12-12 11:30:37,659] [main] java.version = 21
   [testng] 11:30:37,662 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
   [testng] 11:30:37,662 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 11:30:37,701 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-12-12_11-30-37.log]
   [testng] 11:30:37,702 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1b919693 - End of configuration.
   [testng] [2024-12-12 11:30:37,704] [main] testng.directory = /data
   [testng] [2024-12-12 11:30:37,704] [main] testng.configDirectory = /config
   [testng] [2024-12-12 11:30:37,712] [main] testng.multiplier = 1.0
   [testng] [2024-12-12 11:30:37,712] [main] testng.in-memory = false
   [testng] [2024-12-12 11:30:37,712] [main] testng.allow-missing = false
   [testng] [2024-12-12 11:30:37,712] [main] user.language = en
   [testng] [2024-12-12 11:30:37,712] [main] user.country = ${user.country}
   [testng] [2024-12-12 11:30:37,713] [main] Maximum heap size = 15360 MB
   [testng] Scanning for files...
   [testng] [2024-12-12 11:30:52,912] [main] ----------------------------------------
   [testng] [2024-12-12 11:30:52,912] [main] Total files: 22
   [testng] [2024-12-12 11:30:52,913] [main] Scan time: 15.199 s (690 ms/file)
   [testng] [2024-12-12 11:30:52,914] [main] ----------------------------------------
   [testng] Building list of tests...
   [testng] Ready to test 21 files
   [testng] [TestNG] Running:
   [testng]   Bio-Formats software test suite
   [testng] 
   [testng] [2024-12-12 11:31:50,202] [pool-1-thread-1] Initializing /data/converted/dub01.seq: 
   [testng] 11:31:50,203 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
   [testng] 11:31:50,203 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 11:31:50,204 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-12-12_11-31-50.log]
   [testng] 11:31:50,205 |-INFO in ch.qos.logback.core.sift.SiftProcessor@55fd3202 - End of configuration.
   [testng] [2024-12-12 11:31:52,106] [pool-1-thread-12] Initializing /data/converted/mitosis-test.tif: 
   [testng] 11:31:52,106 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
   [testng] 11:31:52,106 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 11:31:52,107 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-12-12_11-31-52.log]
   [testng] 11:31:52,107 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2ebe0126 - End of configuration.
   [testng] [2024-12-12 11:31:56,503] [pool-1-thread-11] Initializing /data/converted/clown8c.ipw: 
   [testng] 11:31:56,503 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
   [testng] 11:31:56,503 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 11:31:56,504 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-12-12_11-31-56.log]
   [testng] 11:31:56,504 |-INFO in ch.qos.logback.core.sift.SiftProcessor@21d85f67 - End of configuration.
   [testng] [2024-12-12 11:31:58,525] [pool-1-thread-10] Initializing /data/converted/NESb_C2_TP7.seq: 
   [testng] 11:31:58,526 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
   [testng] 11:31:58,526 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 11:31:58,526 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-12-12_11-31-58.log]
   [testng] 11:31:58,527 |-INFO in ch.qos.logback.core.sift.SiftProcessor@67fbeca0 - End of configuration.
   [testng] [2024-12-12 11:32:00,707] [pool-1-thread-9] Initializing /data/converted/NESb_C2_TP7.ipw: 
   [testng] 11:32:00,707 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
   [testng] 11:32:00,707 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 11:32:00,708 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-12-12_11-32-00.log]
   [testng] 11:32:00,708 |-INFO in ch.qos.logback.core.sift.SiftProcessor@10221a1d - End of configuration.
   [testng] [2024-12-12 11:32:02,705] [pool-1-thread-8] Initializing /data/converted/clown.seq: 
   [testng] 11:32:02,705 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
   [testng] 11:32:02,706 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 11:32:02,706 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-12-12_11-32-02.log]
   [testng] 11:32:02,707 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6d90189d - End of configuration.
   [testng] [2024-12-12 11:32:05,190] [pool-1-thread-7] Initializing /data/converted/mitosis-test.ipw: 
   [testng] 11:32:05,190 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
   [testng] 11:32:05,190 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 11:32:05,191 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-12-12_11-32-05.log]
   [testng] 11:32:05,191 |-INFO in ch.qos.logback.core.sift.SiftProcessor@260baca7 - End of configuration.
   [testng] [2024-12-12 11:32:06,661] [pool-1-thread-6] Initializing /data/samples/PROBE.TIF: 
   [testng] 11:32:06,662 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
   [testng] 11:32:06,662 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 11:32:06,662 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-12-12_11-32-06.log]
   [testng] 11:32:06,663 |-INFO in ch.qos.logback.core.sift.SiftProcessor@566e32b9 - End of configuration.
   [testng] [2024-12-12 11:32:08,378] [pool-1-thread-5] Initializing /data/xiuwen/head2.seq: 
   [testng] 11:32:08,378 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
   [testng] 11:32:08,378 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 11:32:08,378 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-12-12_11-32-08.log]
   [testng] 11:32:08,379 |-INFO in ch.qos.logback.core.sift.SiftProcessor@84bc4d2 - End of configuration.
   [testng] [2024-12-12 11:32:10,883] [pool-1-thread-4] Initializing /data/converted/NESb_C2_TP7.tiff: 
   [testng] 11:32:10,883 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
   [testng] 11:32:10,883 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 11:32:10,884 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-12-12_11-32-10.log]
   [testng] 11:32:10,884 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7e7a5c8a - End of configuration.
   [testng] [2024-12-12 11:32:16,594] [pool-1-thread-3] Initializing /data/alex/AFAset0003.ips: 
   [testng] 11:32:16,594 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
   [testng] 11:32:16,594 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 11:32:16,595 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-12-12_11-32-16.log]
   [testng] 11:32:16,595 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1f042255 - End of configuration.
   [testng] [2024-12-12 11:32:18,517] [pool-1-thread-2] Initializing /data/samples/HEART.SEQ: 
   [testng] 11:32:18,518 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
   [testng] 11:32:18,518 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 11:32:18,519 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-12-12_11-32-18.log]
   [testng] 11:32:18,519 |-INFO in ch.qos.logback.core.sift.SiftProcessor@85ea298 - End of configuration.
   [testng] [2024-12-12 11:32:38,528] [pool-1-thread-7] Initializing /data/converted/clown8c.tif: 
   [testng] [2024-12-12 11:32:43,866] [pool-1-thread-8] Initializing /data/samples/TISSUE.TIF: 
   [testng] [2024-12-12 11:32:48,520] [pool-1-thread-9] Initializing /data/converted/dub01.pic: 
   [testng] [2024-12-12 11:32:50,355] [pool-1-thread-11] Initializing /data/converted/clown8c.seq: 
   [testng] [2024-12-12 11:32:51,989] [pool-1-thread-10] Initializing /data/converted/clown.ipw: 
   [testng] [2024-12-12 11:32:53,885] [pool-1-thread-6] Initializing /data/converted/mitosis-test.seq: 
   [testng] [2024-12-12 11:32:55,981] [pool-1-thread-1] Initializing /data/converted/dub01.ipw: 
   [testng] [2024-12-12 11:32:57,684] [pool-1-thread-2] Initializing /data/converted/clown.tif: 
   [testng] [2024-12-12 11:32:59,843] [pool-1-thread-5] Initializing /data/samples/FLDUAL.TIF: 
   [testng] 
   [testng] ===============================================
   [testng] Bio-Formats software test suite
   [testng] Total tests run: 1113, Failures: 0, Skips: 0
   [testng] ===============================================
   [testng] 

BUILD SUCCESSFUL
Total time: 11 minutes 15 seconds
Finished: SUCCESS