Started by upstream project "BIOFORMATS-test-repo" build number 289
originally caused by:
Started by upstream project "Trigger" build number 308
originally caused by:
Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@5
[BIOFORMATS-test-folder@5] $ /bin/bash -xe /tmp/jenkins4822173323806882082.sh
+ '[' lim = slidebook ']'
++ date +%u
+ '[' 5 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_45600_merge_ci -v /uod/idr/repos/curated/lim:/data -v /uod/idr-scratch/merge-ci/curated/lim:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
[echo] isSnapshot = true
init-title:
[echo] ----------=========== bio-formats-testing-framework ===========----------
init-timestamp:
init:
copy-resources:
compile:
[resolver:resolve] Resolving artifacts
compile-tests:
[resolver:resolve] Resolving artifacts
[javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
test-automated:
[testng] File leak detector installed
[testng] 00:25:12,467 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
[testng] 00:25:12,469 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - No custom configurators were discovered as a service.
[testng] 00:25:12,469 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 00:25:12,470 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 00:25:12,470 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
[testng] 00:25:12,470 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
[testng] 00:25:12,470 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 0 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
[testng] 00:25:12,470 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 00:25:12,471 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 00:25:12,471 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
[testng] 00:25:12,471 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
[testng] 00:25:12,471 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
[testng] 00:25:12,710 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
[testng] 00:25:12,710 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
[testng] 00:25:12,744 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
[testng] 00:25:12,744 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
[testng] 00:25:12,754 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
[testng] 00:25:12,754 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
[testng] 00:25:12,754 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
[testng] 00:25:12,755 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
[testng] 00:25:12,755 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@7a69b07 - End of configuration.
[testng] 00:25:12,756 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@636be97c - Registering current configuration as safe fallback point
[testng] 00:25:12,756 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 285 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
[testng] [2024-12-13 00:25:12,766] [main] java.version = 1.8.0_342
[testng] 00:25:12,770 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
[testng] 00:25:12,770 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:25:12,818 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-12-13_00-25-12.log]
[testng] 00:25:12,819 |-INFO in ch.qos.logback.core.sift.SiftProcessor@13c9d689 - End of configuration.
[testng] [2024-12-13 00:25:12,821] [main] testng.directory = /data
[testng] [2024-12-13 00:25:12,821] [main] testng.configDirectory = /config
[testng] [2024-12-13 00:25:12,834] [main] testng.multiplier = 1.0
[testng] [2024-12-13 00:25:12,834] [main] testng.in-memory = false
[testng] [2024-12-13 00:25:12,834] [main] testng.allow-missing = false
[testng] [2024-12-13 00:25:12,834] [main] user.language = en
[testng] [2024-12-13 00:25:12,834] [main] user.country = ${user.country}
[testng] [2024-12-13 00:25:12,834] [main] Maximum heap size = 13653 MB
[testng] Scanning for files...
[testng] [2024-12-13 00:25:13,373] [main] ----------------------------------------
[testng] [2024-12-13 00:25:13,373] [main] Total files: 21
[testng] [2024-12-13 00:25:13,373] [main] Scan time: 0.539 s (25 ms/file)
[testng] [2024-12-13 00:25:13,373] [main] ----------------------------------------
[testng] Building list of tests...
[testng] Ready to test 20 files
[testng] [TestNG] Running:
[testng] Bio-Formats software test suite
[testng]
[testng] [2024-12-13 00:25:29,359] [pool-1-thread-1] Initializing /data/venu/Kontrolle0003.lim:
[testng] 00:25:29,359 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
[testng] 00:25:29,359 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:25:29,360 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-12-13_00-25-29.log]
[testng] 00:25:29,360 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4f58757c - End of configuration.
[testng] [2024-12-13 00:25:30,191] [pool-1-thread-12] Initializing /data/venu/Kontrolle0016.lim:
[testng] 00:25:30,191 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
[testng] 00:25:30,192 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:25:30,192 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-12-13_00-25-30.log]
[testng] 00:25:30,193 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6b05e73c - End of configuration.
[testng] [2024-12-13 00:25:30,719] [pool-1-thread-11] Initializing /data/venu/Kontrolle0019.lim:
[testng] 00:25:30,719 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
[testng] 00:25:30,719 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:25:30,720 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-12-13_00-25-30.log]
[testng] 00:25:30,721 |-INFO in ch.qos.logback.core.sift.SiftProcessor@68b0d3d5 - End of configuration.
[testng] [2024-12-13 00:25:31,369] [pool-1-thread-10] Initializing /data/venu/Kontrolle0010.lim:
[testng] 00:25:31,370 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
[testng] 00:25:31,370 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:25:31,370 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-12-13_00-25-31.log]
[testng] 00:25:31,371 |-INFO in ch.qos.logback.core.sift.SiftProcessor@24c1092 - End of configuration.
[testng] [2024-12-13 00:25:31,912] [pool-1-thread-9] Initializing /data/venu/Kontrolle0007.lim:
[testng] 00:25:31,912 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
[testng] 00:25:31,912 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:25:31,913 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-12-13_00-25-31.log]
[testng] 00:25:31,913 |-INFO in ch.qos.logback.core.sift.SiftProcessor@771160ed - End of configuration.
[testng] [2024-12-13 00:25:32,666] [pool-1-thread-8] Initializing /data/venu/Kontrolle0018.lim:
[testng] 00:25:32,666 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
[testng] 00:25:32,666 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:25:32,667 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-12-13_00-25-32.log]
[testng] 00:25:32,667 |-INFO in ch.qos.logback.core.sift.SiftProcessor@375e13e - End of configuration.
[testng] [2024-12-13 00:25:33,849] [pool-1-thread-7] Initializing /data/venu/Kontrolle0009.lim:
[testng] 00:25:33,849 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
[testng] 00:25:33,849 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:25:33,850 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-12-13_00-25-33.log]
[testng] 00:25:33,850 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7b9039e0 - End of configuration.
[testng] [2024-12-13 00:25:34,555] [pool-1-thread-6] Initializing /data/venu/Kontrolle0008.lim:
[testng] 00:25:34,555 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
[testng] 00:25:34,555 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:25:34,556 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-12-13_00-25-34.log]
[testng] 00:25:34,556 |-INFO in ch.qos.logback.core.sift.SiftProcessor@779f408e - End of configuration.
[testng] [2024-12-13 00:25:35,371] [pool-1-thread-5] Initializing /data/venu/Kontrolle0005.lim:
[testng] 00:25:35,371 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
[testng] 00:25:35,371 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:25:35,372 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-12-13_00-25-35.log]
[testng] 00:25:35,372 |-INFO in ch.qos.logback.core.sift.SiftProcessor@647953af - End of configuration.
[testng] [2024-12-13 00:25:36,304] [pool-1-thread-4] Initializing /data/venu/Kontrolle0004.lim:
[testng] 00:25:36,304 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
[testng] 00:25:36,304 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:25:36,305 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-12-13_00-25-36.log]
[testng] 00:25:36,305 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6d0cbf14 - End of configuration.
[testng] [2024-12-13 00:25:36,745] [pool-1-thread-3] Initializing /data/venu/Kontrolle0014.lim:
[testng] 00:25:36,745 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
[testng] 00:25:36,746 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:25:36,746 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-12-13_00-25-36.log]
[testng] 00:25:36,746 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3bb9dc74 - End of configuration.
[testng] [2024-12-13 00:25:37,160] [pool-1-thread-2] Initializing /data/venu/Kontrolle0001.lim:
[testng] 00:25:37,160 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
[testng] 00:25:37,160 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:25:37,161 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-12-13_00-25-37.log]
[testng] 00:25:37,161 |-INFO in ch.qos.logback.core.sift.SiftProcessor@47f3d9c0 - End of configuration.
[testng] [2024-12-13 00:25:46,218] [pool-1-thread-4] Initializing /data/venu/Kontrolle0020.lim:
[testng] [2024-12-13 00:25:46,836] [pool-1-thread-11] Initializing /data/venu/Kontrolle0015.lim:
[testng] [2024-12-13 00:25:47,469] [pool-1-thread-7] Initializing /data/venu/Kontrolle0013.lim:
[testng] [2024-12-13 00:25:48,032] [pool-1-thread-5] Initializing /data/venu/Kontrolle0021.lim:
[testng] [2024-12-13 00:25:48,538] [pool-1-thread-3] Initializing /data/venu/Kontrolle0017.lim:
[testng] [2024-12-13 00:25:49,097] [pool-1-thread-8] Initializing /data/venu/Kontrolle0002.lim:
[testng] [2024-12-13 00:25:49,606] [pool-1-thread-9] Initializing /data/venu/Kontrolle0011.lim:
[testng] [2024-12-13 00:25:51,950] [pool-1-thread-1] Initializing /data/venu/Kontrolle0012.lim:
[testng]
[testng] ===============================================
[testng] Bio-Formats software test suite
[testng] Total tests run: 1060, Failures: 0, Skips: 0
[testng] ===============================================
[testng]
BUILD SUCCESSFUL
Total time: 48 seconds
Finished: SUCCESS